Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010067

Physical Location & Seq

Genomic Coordinates Reverse (-)

15726338 .. 15729170

Gene Structure 2833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G37460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGAGGAAGTAAAGAAGAGGGATTGTATGGAGAAGGCAAGGCCATTCATTTCAATGGTAGTGTTGCAAGTAGGGCTAGCAGGAATGGATATTCTCTCAAAGGCTGTTCTAAACAAAGGCATGAGCAATTACGTCCTTGTTGTTTACCGTCACGCCGTTGCAACCATCGTTATGGCCCCGTTCGCCTTCTATTTCGACAAGAAGGTGAGACCGAAGATGACACTGATGATATTCTTCAAGATATCACTCCTTGGTTTACTCGAGCCAGTGATCGACCAGAACTTATACTATCTCGGGATGAAATATACGACAGCTACATTTGCAACCGCCATGTACAACGTCCTACCCGCAATCACTTTCGTCCTTGCCTATATATTTGGCCTCGAAAGAGTAAAGCTACGGTGCATTAGGAGCACGGGTAAGGTGGTTGGAACATTGGCTACTGTTGGAGGAGCCATGATCATGACACTTGTCAAAGGCCCAGTTCTCGATCTGTTTTGGACCAAAGGAGTCTCTGCACATAACACAGCTGGGACCGACATTCATAGCGCCATCAAAGGCGCAGTATTGGTCACGATTGGTTGTTTTAGCTATGCATGTTTCATGATTCTCCAAGCGATAACATTAAGGACTTACCCTGCTGAGCTCTCTCTCACAGCATGGATATGTCTTATGGGGACAATAGAAGGAACCGCCGTGGCATTAGTGATGGAGAAAGGAAATCCCAGCGCATGGGCCATTGGTTGGGACACTAAACTTCTTACAGCCACCTATAGTGGGATAGTGTGCTCAGCATTGGCTTACTACGTTGGAGGAGTGGTGATGAAAACCAGAGGTCCTGTGTTTGTGACAGCTTTCAGTCCTCTTTGTATGATCATAGTAGCGATTATGTCGACCATCATCTTTGCTGAGCAAATGTACCTTGGAAGGGTTCTTGGTGCTGTAGTTATATGTGCAGGATTATACCTTGTGATATGGGGCAAAGGAAAAGATTACAAATATAATTCCACGCTGCAATTAGATGACGAATCAGCACAACCAAAGCTAGAACTAAGCGGAAACGGGAAGGATAATGTTGATCATGAAGTCATTACTATAAGCAAGCAAGGAGAACAAAGAAGAACAGCTGTAGAAACAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007154 GO:0007165 GO:0008150 GO:0008509 GO:0008514 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0032973 GO:0034220 GO:0042221 GO:0042592 GO:0043090 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055081 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071702 GO:0071705 GO:0071944 GO:0080144 GO:0098656 GO:0099568 GO:0140115 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

380

Amino Acids

41.53

Weight (kDa)

9.1

Isoelectric Point (pI)

31.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	24 - 154	1.4e-10	EamA-like transporter family
EamA	PF00892	186 - 325	3.4e-09	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37450 AT2G37450 AT2G37450 AT2G37460
fragaria_vesca	FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370
malus_domestica	MD04G1120400.v1.1
prunus_persica	Prupe.6G249600_v2.0.a1
pyrus_communis	pycom04g10950
rosa_chinensis	RchiOBHm_Chr3g0467431
rosa_laevigata	RLG00000024505
rosa_multiflora	Rmu_sc0001601.1_g000006
rosa_roxburghii	Rroxscaffold_6G00413680
rosa_rugosa	Rorug03G0086900
rosa_samantha	Rh3BG157000 Rh3CG156900 Rh3DG157800
rosa_wichuraiana	Rw3G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	732, 744
AccI	GTMKAC	1 cut(s)	893
AciI	CCGC	4 cut(s)	327, 348, 693, 1056
AfaI	GTAC	2 cut(s)	335, 920
AfiI	CCNNNNNNNGG	4 cut(s)	732, 744, 777, 928
AgsI	TTSAA	2 cut(s)	54, 238
AluBI	AGCT	8 cut(s)	314, 397, 530, 591, 646, 854, 1045, 1127
AluI	AGCT	8 cut(s)	314, 397, 530, 591, 646, 854, 1045, 1127
Alw21I	GWGCWC	3 cut(s)	416, 648, 791
Alw26I	GTCTC	2 cut(s)	202, 517
Ama87I	CYCGRG	2 cut(s)	260, 293
AoxI	GGCC	5 cut(s)	41, 174, 379, 478, 735
ApeKI	GCWGC	1 cut(s)	1012
AspLEI	GCGC	3 cut(s)	551, 563, 731
AspS9I	GGNCC	6 cut(s)	175, 479, 501, 534, 735, 836
AsuHPI	GGTGA	2 cut(s)	217, 832
AsuNHI	GCTAGC	1 cut(s)	76
AvaI	CYCGRG	2 cut(s)	260, 293
AvaII	GGWCC	3 cut(s)	501, 534, 836
BanII	GRGCYC	1 cut(s)	648
Bbv12I	GWGCWC	3 cut(s)	416, 648, 791
BbvI	GCAGC	1 cut(s)	999
BccI	CCATC	4 cut(s)	173, 560, 703, 905
BceAI	ACGGC	2 cut(s)	140, 680
BclI	TGATCA	3 cut(s)	459, 873, 1078
BcoDI	GTCTC	2 cut(s)	202, 517
BfaI	CTAG	2 cut(s)	77, 1046
BfmI	CTRYAG	3 cut(s)	772, 942, 1128
BfoI	RGCGCY	1 cut(s)	552
BisI	GCNGC	1 cut(s)	1013
BlpI	GCTNAGC	3 cut(s)	642, 790, 909
BlsI	GCNGC	1 cut(s)	1014
Bme18I	GGWCC	3 cut(s)	501, 534, 836
BmeT110I	CYCGRG	2 cut(s)	260, 293
BmgT120I	GGNCC	6 cut(s)	175, 479, 501, 534, 735, 836
BmiI	GGNNCC	4 cut(s)	177, 454, 535, 691
BmrI	ACTGGG	1 cut(s)	476
BmtI	GCTAGC	1 cut(s)	80
BmuI	ACTGGG	1 cut(s)	476
BoxI	GACNNNNGTC	1 cut(s)	470
Bpu1102I	GCTNAGC	3 cut(s)	642, 790, 909
BsaI	GGTCTC	1 cut(s)	202
BsaJI	CCNNGG	3 cut(s)	250, 696, 922
BsaXI	ACNNNNNCTCC	4 cut(s)	403, 433, 804, 834
Bsc4I	CCNNNNNNNGG	4 cut(s)	732, 744, 777, 928
Bse1I	ACTGG	2 cut(s)	266, 482
BseDI	CCNNGG	3 cut(s)	250, 696, 922
BseGI	GGATG	1 cut(s)	303
BseLI	CCNNNNNNNGG	4 cut(s)	732, 744, 777, 928
BseMII	CTCAG	3 cut(s)	633, 804, 900
BseNI	ACTGG	2 cut(s)	266, 482
BseRI	GAGGAG	2 cut(s)	465, 828
BseXI	GCAGC	1 cut(s)	999
BseYI	CCCAGC	2 cut(s)	530, 725
BsgI	GTGCAG	2 cut(s)	501, 975
BshFI	GGCC	5 cut(s)	43, 176, 381, 480, 737
BsiHKAI	GWGCWC	3 cut(s)	416, 648, 791
BsiHKCI	CYCGRG	2 cut(s)	260, 293
BslFI	GGGAC	3 cut(s)	547, 691, 761
BslI	CCNNNNNNNGG	4 cut(s)	732, 744, 777, 928
BsmAI	GTCTC	2 cut(s)	202, 517
BsmFI	GGGAC	3 cut(s)	547, 691, 761
BsnI	GGCC	5 cut(s)	43, 176, 381, 480, 737
Bso31I	GGTCTC	1 cut(s)	202
BsoBI	CYCGRG	2 cut(s)	260, 293
Bsp1286I	GDGCHC	3 cut(s)	416, 648, 791
Bsp1407I	TGTACA	1 cut(s)	333
Bsp143I	GATC	5 cut(s)	270, 459, 490, 873, 1078
Bsp1720I	GCTNAGC	3 cut(s)	642, 790, 909
BspACI	CCGC	4 cut(s)	327, 348, 693, 1056
BspANI	GGCC	5 cut(s)	43, 176, 381, 480, 737
BspCNI	CTCAG	3 cut(s)	634, 803, 901
BspHI	TCATGA	3 cut(s)	462, 603, 1081
BspLI	GGNNCC	4 cut(s)	177, 454, 535, 691
BspOI	GCTAGC	1 cut(s)	80
BspTNI	GGTCTC	1 cut(s)	202
BsrGI	TGTACA	1 cut(s)	333
BsrI	ACTGG	2 cut(s)	266, 482
BssECI	CCNNGG	3 cut(s)	250, 696, 922
BssMI	GATC	5 cut(s)	270, 459, 490, 873, 1078
BssT1I	CCWWGG	2 cut(s)	250, 922
Bst4CI	ACNGT	4 cut(s)	149, 402, 445, 1138
Bst6I	CTCTTC	1 cut(s)	11
BstAUI	TGTACA	1 cut(s)	333
BstC8I	GCNNGC	2 cut(s)	78, 1103
BstDEI	CTNAG	4 cut(s)	642, 790, 909, 1052
BstDSI	CCRYGG	1 cut(s)	696
BstF5I	GGATG	1 cut(s)	303
BstH2I	RGCGCY	1 cut(s)	552
BstHHI	GCGC	3 cut(s)	551, 563, 731
BstKTI	GATC	5 cut(s)	273, 462, 493, 876, 1081
BstMAI	GTCTC	2 cut(s)	202, 517
BstMBI	GATC	5 cut(s)	270, 459, 490, 873, 1078
BstMWI	GCNNNNNNNGC	4 cut(s)	73, 182, 320, 411
BstNSI	RCATGY	1 cut(s)	600
BstPAI	GACNNNNGTC	1 cut(s)	470
BstSFI	CTRYAG	3 cut(s)	772, 942, 1128
BstV1I	GCAGC	1 cut(s)	999
BstXI	CCANNNNNNTGG	1 cut(s)	172
BsuRI	GGCC	5 cut(s)	43, 176, 381, 480, 737
BtgI	CCRYGG	1 cut(s)	696
BtsCI	GGATG	1 cut(s)	303
BtsIMutI	CAGTG	2 cut(s)	221, 273
Cac8I	GCNNGC	2 cut(s)	78, 1103
CciI	TCATGA	3 cut(s)	462, 603, 1081
CfoI	GCGC	3 cut(s)	551, 563, 731
Cfr13I	GGNCC	6 cut(s)	175, 479, 501, 534, 735, 836
Csp6I	GTAC	2 cut(s)	334, 919
CviAII	CATG	9 cut(s)	121, 331, 457, 463, 597, 604, 660, 732, 1082
CviQI	GTAC	2 cut(s)	334, 919
DdeI	CTNAG	4 cut(s)	642, 790, 909, 1052
DpnI	GATC	5 cut(s)	272, 461, 492, 875, 1080
DpnII	GATC	5 cut(s)	270, 459, 490, 873, 1078
Eam1104I	CTCTTC	1 cut(s)	11
EarI	CTCTTC	1 cut(s)	11
Ecl136II	GAGCTC	1 cut(s)	646
Eco130I	CCWWGG	2 cut(s)	250, 922
Eco24I	GRGCYC	1 cut(s)	648
Eco31I	GGTCTC	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	243
Eco47I	GGWCC	3 cut(s)	501, 534, 836
Eco53kI	GAGCTC	1 cut(s)	646
Eco88I	CYCGRG	2 cut(s)	260, 293
EcoICRI	GAGCTC	1 cut(s)	646
EcoO109I	RGGNCCY	1 cut(s)	836
EcoRV	GATATC	1 cut(s)	243
EcoT14I	CCWWGG	2 cut(s)	250, 922
EcoT22I	ATGCAT	1 cut(s)	598
EcoT38I	GRGCYC	1 cut(s)	648
ErhI	CCWWGG	2 cut(s)	250, 922
FaeI	CATG	9 cut(s)	124, 334, 460, 466, 600, 607, 663, 735, 1085
FaqI	GGGAC	3 cut(s)	547, 691, 761
FatI	CATG	9 cut(s)	120, 330, 456, 462, 596, 603, 659, 731, 1081
FauI	CCCGC	1 cut(s)	355
FbaI	TGATCA	3 cut(s)	459, 873, 1078
FblI	GTMKAC	1 cut(s)	893
Fnu4HI	GCNGC	1 cut(s)	1013
FokI	GGATG	1 cut(s)	310
FriOI	GRGCYC	1 cut(s)	648
Fsp4HI	GCNGC	1 cut(s)	1013
FspBI	CTAG	2 cut(s)	77, 1046
GlaI	GCGC	3 cut(s)	550, 562, 730
GluI	GCNGC	1 cut(s)	1013
GsaI	CCCAGC	2 cut(s)	534, 729
HaeII	RGCGCY	1 cut(s)	552
HaeIII	GGCC	5 cut(s)	43, 176, 381, 480, 737
HhaI	GCGC	3 cut(s)	551, 563, 731
Hin1II	CATG	9 cut(s)	124, 334, 460, 466, 600, 607, 663, 735, 1085
Hin6I	GCGC	3 cut(s)	549, 561, 729
HinP1I	GCGC	3 cut(s)	549, 561, 729
HincII	GTYRAC	1 cut(s)	894
HindII	GTYRAC	1 cut(s)	894
HinfI	GANTC	3 cut(s)	510, 607, 1028
HphI	GGTGA	2 cut(s)	217, 832
Hpy166II	GTNNAC	3 cut(s)	145, 257, 894
Hpy188III	TCNNGA	7 cut(s)	238, 295, 463, 488, 574, 604, 1082
Hpy8I	GTNNAC	3 cut(s)	145, 257, 894
HpyAV	CCTTC	6 cut(s)	28, 196, 196, 680, 921, 1060
HpyCH4III	ACNGT	4 cut(s)	149, 402, 445, 1138
HpyCH4IV	ACGT	3 cut(s)	132, 339, 807
HpyCH4V	TGCA	8 cut(s)	67, 161, 323, 405, 518, 596, 956, 1015
HpyF10VI	GCNNNNNNNGC	4 cut(s)	73, 182, 320, 411
HpyF3I	CTNAG	4 cut(s)	642, 790, 909, 1052
HpySE526I	ACGT	3 cut(s)	132, 339, 807
Hsp92II	CATG	9 cut(s)	124, 334, 460, 466, 600, 607, 663, 735, 1085
HspAI	GCGC	3 cut(s)	549, 561, 729
Ksp22I	TGATCA	3 cut(s)	459, 873, 1078
Kzo9I	GATC	5 cut(s)	270, 459, 490, 873, 1078
LmnI	GCTCC	2 cut(s)	411, 452
Lsp1109I	GCAGC	1 cut(s)	999
MaeI	CTAG	2 cut(s)	77, 1046
MaeII	ACGT	3 cut(s)	132, 339, 807
MaeIII	GTNAC	3 cut(s)	149, 571, 847
MalI	GATC	5 cut(s)	272, 461, 492, 875, 1080
MboI	GATC	5 cut(s)	270, 459, 490, 873, 1078
MboII	GAAGA	4 cut(s)	28, 226, 226, 1131
MhlI	GDGCHC	3 cut(s)	416, 648, 791
MluCI	AATT	3 cut(s)	127, 1003, 1016
MlyI	GAGTC	1 cut(s)	519
MmeI	TCCRAC	3 cut(s)	409, 427, 790
MnlI	CCTC	6 cut(s)	12, 392, 443, 806, 827, 873
Mph1103I	ATGCAT	1 cut(s)	598
MseI	TTAA	1 cut(s)	626
MslI	CAYNNNNRTG	4 cut(s)	53, 170, 461, 664
MspA1I	CMGCKG	2 cut(s)	530, 1127
MwoI	GCNNNNNNNGC	4 cut(s)	73, 182, 320, 411
NdeII	GATC	5 cut(s)	270, 459, 490, 873, 1078
NheI	GCTAGC	1 cut(s)	76
NlaIII	CATG	9 cut(s)	124, 334, 460, 466, 600, 607, 663, 735, 1085
NlaIV	GGNNCC	4 cut(s)	177, 454, 535, 691
NmuCI	GTSAC	3 cut(s)	149, 571, 847
NsiI	ATGCAT	1 cut(s)	598
NspI	RCATGY	1 cut(s)	600
PaeR7I	CTCGAG	1 cut(s)	260
PagI	TCATGA	3 cut(s)	462, 603, 1081
PfeI	GAWTC	2 cut(s)	607, 1028
PflMI	CCANNNNNTGG	2 cut(s)	732, 744
PkrI	GCNGC	1 cut(s)	1014
PleI	GAGTC	1 cut(s)	518
PpsI	GAGTC	1 cut(s)	518
PpuMI	RGGWCCY	1 cut(s)	836
PshAI	GACNNNNGTC	1 cut(s)	470
Psp124BI	GAGCTC	1 cut(s)	648
Psp5II	RGGWCCY	1 cut(s)	836
PspFI	CCCAGC	2 cut(s)	530, 725
PspN4I	GGNNCC	4 cut(s)	177, 454, 535, 691
PspPI	GGNCC	6 cut(s)	175, 479, 501, 534, 735, 836
PspPPI	RGGWCCY	1 cut(s)	836
PspXI	VCTCGAGB	1 cut(s)	260
PsrI	GAACNNNNNNTAC	2 cut(s)	424, 456
PvuII	CAGCTG	2 cut(s)	530, 1127
RsaI	GTAC	2 cut(s)	335, 920
RsaNI	GTAC	2 cut(s)	334, 919
RseI	CAYNNNNRTG	4 cut(s)	53, 170, 461, 664
SacI	GAGCTC	1 cut(s)	648
SalI	GTCGAC	1 cut(s)	892
SaqAI	TTAA	1 cut(s)	626
SatI	GCNGC	1 cut(s)	1013
Sau3AI	GATC	5 cut(s)	270, 459, 490, 873, 1078
Sau96I	GGNCC	6 cut(s)	175, 479, 501, 534, 735, 836
SchI	GAGTC	1 cut(s)	519
SduI	GDGCHC	3 cut(s)	416, 648, 791
SfcI	CTRYAG	3 cut(s)	772, 942, 1128
Sfr274I	CTCGAG	1 cut(s)	260
SinI	GGWCC	3 cut(s)	501, 534, 836
SlaI	CTCGAG	1 cut(s)	260
SmiMI	CAYNNNNRTG	4 cut(s)	53, 170, 461, 664
SmlI	CTYRAG	1 cut(s)	260
SmoI	CTYRAG	1 cut(s)	260
Sse9I	AATT	3 cut(s)	127, 1003, 1016
SsiI	CCGC	4 cut(s)	327, 348, 693, 1056
SspMI	CTAG	2 cut(s)	77, 1046
SstI	GAGCTC	1 cut(s)	648
StyI	CCWWGG	2 cut(s)	250, 922
TaaI	ACNGT	4 cut(s)	149, 402, 445, 1138
TaiI	ACGT	3 cut(s)	135, 342, 810
TaqI	TCGA	6 cut(s)	195, 261, 273, 384, 489, 893
TaqII	GACCGA	2 cut(s)	226, 551
TasI	AATT	3 cut(s)	127, 1003, 1016
TatI	WGTACW	1 cut(s)	333
TfiI	GAWTC	2 cut(s)	607, 1028
Tru1I	TTAA	1 cut(s)	626
Tru9I	TTAA	1 cut(s)	626
TscAI	CASTG	2 cut(s)	228, 273
TseFI	GTSAC	3 cut(s)	149, 571, 847
TseI	GCWGC	1 cut(s)	1012
Tsp45I	GTSAC	3 cut(s)	149, 571, 847
TspDTI	ATGAA	6 cut(s)	37, 314, 533, 592, 839, 1098
TspRI	CASTG	2 cut(s)	228, 273
Van91I	CCANNNNNTGG	2 cut(s)	732, 744
VpaK11BI	GGWCC	3 cut(s)	501, 534, 836
XceI	RCATGY	1 cut(s)	600
XhoI	CTCGAG	1 cut(s)	260
XmiI	GTMKAC	1 cut(s)	893
XspI	CTAG	2 cut(s)	77, 1046
Zsp2I	ATGCAT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.