Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010067

Physical Location & Seq

Genomic Coordinates Reverse (-)

24519686 .. 24521937

Gene Structure 2252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G249600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGAGCAACTTTGGACATGGATTGCTTGAAAGAGTCAAGGCTGCCAAGCCTTTCTTTGCTGTTATTTTCTTGCAATTTGGGCTTGCAGGCATGGATATTCTCTCCAAGGCTGCACTAAACCAGGGGATGAGCAACTATGTGCTCGTTGTCTACCGCCACGTAGTTGCCACTGCTGTCGTTGCCCCTTTCGCGCTGATCCTGGACAAAAAAATAAGACCGAAGATGACGCTTCCAATCTTCATCAAGATAATGCTGCTCGGCCTACTGGAGCCAGTTATTGACCAAAATTTGTATTTCATGGGAATGAGGTACACAACAGCAACGTTTGCAGCAGCTATGTGCAACATTCTCCCTGCCCTTACTTTTGCAATGGCTTGGATTCTTAGGCTTGAGAAAGTAAAGTTGAAATGCATCCGCAGCCAAAGTAAGGTGTTTGGGACTGCAGCAACAGTTGCAGGTGCCATGATCATGACACTGGTAAAGGGGCCACTGTTAGATTTGTTTTGGACCAGAGGAACAACTAGCCATGAACAGCAAACAGGTGGGGCTATAAGCCTCCAAAGCTCAATCAAAGGTGCCGTAATGATCACAATAGGCTGCTTCTGCTGGGCCTGTTTCATGATTCTGCAGTCAATCACATTAAAAACATACCCAGCTGAGCTCTCCCTTTCAGCTTGGATATGCCTGATGGGCACACTGGAAGGAACTGCTCTAGCGTTGGTGATGGAAAGGGGAAACTCTGCCGTTTGGGCTATCAAATGGGACGCAAAGTTATTGGCAGCTTGCTACAGTGCCGTTTTCTGTTCTGGGCTAGCTTATTACATTCAAGGAGTTGTGATGAAATACAGAGGCCCTGTGTTTGTGACAGCTTTCAGTCCCCTAAGCATGGTTATTGTTGCTGTCATGAGCTCCTTCATTTTGCGCGAGCAACTGTATCTGGGAAGGCTACTCGGTGCTGCAGTCATAGTCGCCGGCCTATATATGGTTGTATGGGGGAAAAGCAAAGATTACAAGTCCGAAACCCCGACAATCGAAGAGGAAGTAGCATCAACAAAACAAGCACAAGCAAAGGAAAATCCCAATCTTCAGGCCATCACGATTGCATCGTCTGGGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007154 GO:0007165 GO:0008150 GO:0008509 GO:0008514 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0032973 GO:0034220 GO:0042221 GO:0042592 GO:0043090 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055081 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071702 GO:0071705 GO:0071944 GO:0080144 GO:0098656 GO:0099568 GO:0140115 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

373

Amino Acids

40.54

Weight (kDa)

9.36

Isoelectric Point (pI)

37.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37450 AT2G37450 AT2G37450 AT2G37460
fragaria_vesca	FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370
malus_domestica	MD04G1120400.v1.1
prunus_persica	Prupe.6G249600_v2.0.a1
pyrus_communis	pycom04g10950
rosa_chinensis	RchiOBHm_Chr3g0467431
rosa_laevigata	RLG00000024505
rosa_multiflora	Rmu_sc0001601.1_g000006
rosa_roxburghii	Rroxscaffold_6G00413680
rosa_rugosa	Rorug03G0086900
rosa_samantha	Rh3BG157000 Rh3CG156900 Rh3DG157800
rosa_wichuraiana	Rw3G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	446
Acc36I	ACCTGC	1 cut(s)	446
AccB1I	GGYRCC	2 cut(s)	458, 575
AccI	GTMKAC	1 cut(s)	150
AccII	CGCG	2 cut(s)	191, 924
AciI	CCGC	2 cut(s)	154, 415
AclI	AACGTT	1 cut(s)	323
AclWI	GGATC	1 cut(s)	190
AcsI	RAATTY	1 cut(s)	286
AcuI	CTGAAG	1 cut(s)	1070
AfaI	GTAC	1 cut(s)	311
AfiI	CCNNNNNNNGG	3 cut(s)	427, 886, 982
AgsI	TTSAA	3 cut(s)	29, 406, 827
AjnI	CCWGG	2 cut(s)	120, 198
AluBI	AGCT	9 cut(s)	335, 564, 656, 661, 674, 782, 815, 869, 909
AluI	AGCT	9 cut(s)	335, 564, 656, 661, 674, 782, 815, 869, 909
Alw21I	GWGCWC	3 cut(s)	144, 663, 911
AlwI	GGATC	1 cut(s)	190
AoxI	GGCC	6 cut(s)	259, 485, 609, 850, 973, 1089
ApoI	RAATTY	1 cut(s)	286
AspLEI	GCGC	2 cut(s)	193, 924
AspS9I	GGNCC	4 cut(s)	485, 507, 609, 851
AsuHPI	GGTGA	1 cut(s)	733
AsuNHI	GCTAGC	1 cut(s)	811
AvaII	GGWCC	1 cut(s)	507
BaeGI	GKGCMC	1 cut(s)	695
BanI	GGYRCC	2 cut(s)	458, 575
BanII	GRGCYC	2 cut(s)	663, 911
Bbv12I	GWGCWC	3 cut(s)	144, 663, 911
BccI	CCATC	3 cut(s)	682, 718, 1100
BceAI	ACGGC	3 cut(s)	563, 728, 779
BciT130I	CCWGG	2 cut(s)	122, 200
BclI	TGATCA	2 cut(s)	465, 585
BfaI	CTAG	3 cut(s)	522, 713, 812
BfmI	CTRYAG	4 cut(s)	441, 626, 787, 957
BfuAI	ACCTGC	1 cut(s)	446
BglI	GCCNNNNNGGC	2 cut(s)	690, 749
BlpI	GCTNAGC	1 cut(s)	657
Bme1390I	CCNGG	2 cut(s)	122, 200
Bme18I	GGWCC	1 cut(s)	507
BmgT120I	GGNCC	4 cut(s)	485, 507, 609, 851
BmiI	GGNNCC	4 cut(s)	270, 460, 486, 577
BmrFI	CCNGG	2 cut(s)	122, 200
BmsI	GCATC	3 cut(s)	420, 1055, 1112
BmtI	GCTAGC	1 cut(s)	815
BpmI	CTGGAG	1 cut(s)	287
Bpu10I	CCTNAGC	1 cut(s)	881
Bpu1102I	GCTNAGC	1 cut(s)	657
BpuEI	CTTGAG	1 cut(s)	410
BsaAI	YACGTR	1 cut(s)	160
BsaJI	CCNNGG	2 cut(s)	105, 121
Bsc4I	CCNNNNNNNGG	3 cut(s)	427, 886, 982
Bse118I	RCCGGY	1 cut(s)	971
Bse1I	ACTGG	4 cut(s)	270, 272, 480, 702
Bse3DI	GCAATG	1 cut(s)	375
BseBI	CCWGG	2 cut(s)	122, 200
BseDI	CCNNGG	2 cut(s)	105, 121
BseGI	GGATG	2 cut(s)	132, 411
BseLI	CCNNNNNNNGG	3 cut(s)	427, 886, 982
BseMI	GCAATG	1 cut(s)	375
BseMII	CTCAG	1 cut(s)	648
BseNI	ACTGG	4 cut(s)	270, 272, 480, 702
BseSI	GKGCMC	1 cut(s)	695
BseYI	CCCAGC	2 cut(s)	606, 652
BsgI	GTGCAG	1 cut(s)	96
Bsh1236I	CGCG	2 cut(s)	191, 924
BshFI	GGCC	6 cut(s)	261, 487, 611, 852, 975, 1091
BshNI	GGYRCC	2 cut(s)	458, 575
BsiHKAI	GWGCWC	3 cut(s)	144, 663, 911
BsiSI	CCGG	1 cut(s)	972
BslFI	GGGAC	3 cut(s)	451, 776, 861
BslI	CCNNNNNNNGG	3 cut(s)	427, 886, 982
BsmFI	GGGAC	3 cut(s)	451, 776, 861
BsnI	GGCC	6 cut(s)	261, 487, 611, 852, 975, 1091
Bsp1286I	GDGCHC	4 cut(s)	144, 663, 695, 911
Bsp143I	GATC	3 cut(s)	195, 465, 585
Bsp1720I	GCTNAGC	1 cut(s)	657
BspACI	CCGC	2 cut(s)	154, 415
BspANI	GGCC	6 cut(s)	261, 487, 611, 852, 975, 1091
BspCNI	CTCAG	1 cut(s)	649
BspFNI	CGCG	2 cut(s)	191, 924
BspHI	TCATGA	3 cut(s)	468, 618, 903
BspLI	GGNNCC	4 cut(s)	270, 460, 486, 577
BspMAI	CTGCAG	3 cut(s)	445, 630, 961
BspMI	ACCTGC	1 cut(s)	446
BspOI	GCTAGC	1 cut(s)	815
BspPI	GGATC	1 cut(s)	190
BspT107I	GGYRCC	2 cut(s)	458, 575
BsrDI	GCAATG	1 cut(s)	375
BsrFI	RCCGGY	1 cut(s)	971
BsrI	ACTGG	4 cut(s)	270, 272, 480, 702
BssAI	RCCGGY	1 cut(s)	971
BssECI	CCNNGG	2 cut(s)	105, 121
BssMI	GATC	3 cut(s)	195, 465, 585
BssT1I	CCWWGG	1 cut(s)	105
Bst2UI	CCWGG	2 cut(s)	122, 200
Bst4CI	ACNGT	4 cut(s)	451, 492, 791, 933
Bst6I	CTCTTC	1 cut(s)	1029
BstAPI	GCANNNNNTGC	2 cut(s)	326, 452
BstBAI	YACGTR	1 cut(s)	160
BstC8I	GCNNGC	6 cut(s)	84, 88, 784, 813, 926, 973
BstDEI	CTNAG	3 cut(s)	383, 657, 881
BstF5I	GGATG	2 cut(s)	132, 411
BstFNI	CGCG	2 cut(s)	191, 924
BstHHI	GCGC	2 cut(s)	193, 924
BstKTI	GATC	3 cut(s)	198, 468, 588
BstMBI	GATC	3 cut(s)	195, 465, 585
BstNI	CCWGG	2 cut(s)	122, 200
BstSCI	CCNGG	2 cut(s)	120, 198
BstSFI	CTRYAG	4 cut(s)	441, 626, 787, 957
BstSLI	GKGCMC	1 cut(s)	695
BstUI	CGCG	2 cut(s)	191, 924
BsuRI	GGCC	6 cut(s)	261, 487, 611, 852, 975, 1091
BtsCI	GGATG	2 cut(s)	132, 411
BtsI	GCAGTG	1 cut(s)	168
BtsIMutI	CAGTG	5 cut(s)	168, 473, 488, 695, 796
BveI	ACCTGC	1 cut(s)	446
Cac8I	GCNNGC	6 cut(s)	84, 88, 784, 813, 926, 973
CciI	TCATGA	3 cut(s)	468, 618, 903
CfoI	GCGC	2 cut(s)	193, 924
Cfr10I	RCCGGY	1 cut(s)	971
Cfr13I	GGNCC	4 cut(s)	485, 507, 609, 851
CseI	GACGC	2 cut(s)	235, 773
Csp6I	GTAC	1 cut(s)	310
CviAII	CATG	9 cut(s)	17, 91, 298, 463, 469, 527, 619, 886, 904
CviQI	GTAC	1 cut(s)	310
DdeI	CTNAG	3 cut(s)	383, 657, 881
DpnI	GATC	3 cut(s)	197, 467, 587
DpnII	GATC	3 cut(s)	195, 465, 585
Eam1104I	CTCTTC	1 cut(s)	1029
EarI	CTCTTC	1 cut(s)	1029
Ecl136II	GAGCTC	2 cut(s)	661, 909
Eco130I	CCWWGG	1 cut(s)	105
Eco24I	GRGCYC	2 cut(s)	663, 911
Eco47I	GGWCC	1 cut(s)	507
Eco53kI	GAGCTC	2 cut(s)	661, 909
Eco57I	CTGAAG	1 cut(s)	1070
EcoICRI	GAGCTC	2 cut(s)	661, 909
EcoO109I	RGGNCCY	1 cut(s)	851
EcoRII	CCWGG	2 cut(s)	120, 198
EcoT14I	CCWWGG	1 cut(s)	105
EcoT22I	ATGCAT	1 cut(s)	413
EcoT38I	GRGCYC	2 cut(s)	663, 911
ErhI	CCWWGG	1 cut(s)	105
FaeI	CATG	9 cut(s)	20, 94, 301, 466, 472, 530, 622, 889, 907
FalI	AAGNNNNNCTT	2 cut(s)	38, 70
FaqI	GGGAC	3 cut(s)	451, 776, 861
FatI	CATG	9 cut(s)	16, 90, 297, 462, 468, 526, 618, 885, 903
FbaI	TGATCA	2 cut(s)	465, 585
FblI	GTMKAC	1 cut(s)	150
FokI	GGATG	2 cut(s)	139, 398
FriOI	GRGCYC	2 cut(s)	663, 911
FspBI	CTAG	3 cut(s)	522, 713, 812
GlaI	GCGC	2 cut(s)	192, 923
GsaI	CCCAGC	2 cut(s)	610, 656
GsuI	CTGGAG	1 cut(s)	287
HaeIII	GGCC	6 cut(s)	261, 487, 611, 852, 975, 1091
HapII	CCGG	1 cut(s)	972
HgaI	GACGC	2 cut(s)	235, 773
HhaI	GCGC	2 cut(s)	193, 924
Hin1II	CATG	9 cut(s)	20, 94, 301, 466, 472, 530, 622, 889, 907
Hin6I	GCGC	2 cut(s)	191, 922
HinP1I	GCGC	2 cut(s)	191, 922
HinfI	GANTC	3 cut(s)	33, 379, 622
HpaII	CCGG	1 cut(s)	972
HphI	GGTGA	1 cut(s)	733
Hpy166II	GTNNAC	2 cut(s)	151, 312
Hpy188I	TCNGA	1 cut(s)	1018
Hpy188III	TCNNGA	5 cut(s)	244, 469, 619, 904, 1096
Hpy8I	GTNNAC	2 cut(s)	151, 312
HpyAV	CCTTC	3 cut(s)	695, 922, 936
HpyCH4III	ACNGT	4 cut(s)	451, 492, 791, 933
HpyCH4IV	ACGT	2 cut(s)	159, 323
HpyF3I	CTNAG	3 cut(s)	383, 657, 881
HpySE526I	ACGT	2 cut(s)	159, 323
Hsp92II	CATG	9 cut(s)	20, 94, 301, 466, 472, 530, 622, 889, 907
HspAI	GCGC	2 cut(s)	191, 922
KroI	GCCGGC	1 cut(s)	971
KroNI	GCCGGC	1 cut(s)	973
Ksp22I	TGATCA	2 cut(s)	465, 585
Kzo9I	GATC	3 cut(s)	195, 465, 585
LmnI	GCTCC	2 cut(s)	268, 914
LweI	GCATC	3 cut(s)	420, 1055, 1112
MaeI	CTAG	3 cut(s)	522, 713, 812
MaeII	ACGT	2 cut(s)	159, 323
MaeIII	GTNAC	1 cut(s)	862
MalI	GATC	3 cut(s)	197, 467, 587
MboI	GATC	3 cut(s)	195, 465, 585
MboII	GAAGA	4 cut(s)	229, 232, 1046, 1076
MhlI	GDGCHC	4 cut(s)	144, 663, 695, 911
MluCI	AATT	2 cut(s)	74, 286
MlyI	GAGTC	1 cut(s)	42
MnlI	CCTC	5 cut(s)	300, 506, 566, 842, 1030
Mph1103I	ATGCAT	1 cut(s)	413
MroNI	GCCGGC	1 cut(s)	971
MseI	TTAA	1 cut(s)	641
MslI	CAYNNNNRTG	2 cut(s)	302, 467
MspA1I	CMGCKG	1 cut(s)	656
MspI	CCGG	1 cut(s)	972
MspR9I	CCNGG	2 cut(s)	122, 200
MvaI	CCWGG	2 cut(s)	122, 200
MvnI	CGCG	2 cut(s)	191, 924
NaeI	GCCGGC	1 cut(s)	973
NdeII	GATC	3 cut(s)	195, 465, 585
NgoMIV	GCCGGC	1 cut(s)	971
NheI	GCTAGC	1 cut(s)	811
NlaIII	CATG	9 cut(s)	20, 94, 301, 466, 472, 530, 622, 889, 907
NlaIV	GGNNCC	4 cut(s)	270, 460, 486, 577
NmeAIII	GCCGAG	1 cut(s)	237
NmuCI	GTSAC	1 cut(s)	862
NsiI	ATGCAT	1 cut(s)	413
PagI	TCATGA	3 cut(s)	468, 618, 903
PaqCI	CACCTGC	1 cut(s)	446
PcsI	WCGNNNNNNNCGW	1 cut(s)	1103
PdiI	GCCGGC	1 cut(s)	973
PfeI	GAWTC	2 cut(s)	379, 622
PfoI	TCCNGGA	1 cut(s)	198
PleI	GAGTC	1 cut(s)	41
PpsI	GAGTC	1 cut(s)	41
Ppu21I	YACGTR	1 cut(s)	160
Psp124BI	GAGCTC	2 cut(s)	663, 911
Psp1406I	AACGTT	1 cut(s)	323
Psp6I	CCWGG	2 cut(s)	120, 198
PspFI	CCCAGC	2 cut(s)	606, 652
PspGI	CCWGG	2 cut(s)	120, 198
PspN4I	GGNNCC	4 cut(s)	270, 460, 486, 577
PspPI	GGNCC	4 cut(s)	485, 507, 609, 851
PstI	CTGCAG	3 cut(s)	445, 630, 961
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	1 cut(s)	311
RsaNI	GTAC	1 cut(s)	310
RseI	CAYNNNNRTG	2 cut(s)	302, 467
SacI	GAGCTC	2 cut(s)	663, 911
SaqAI	TTAA	1 cut(s)	641
Sau3AI	GATC	3 cut(s)	195, 465, 585
Sau96I	GGNCC	4 cut(s)	485, 507, 609, 851
SchI	GAGTC	1 cut(s)	42
ScrFI	CCNGG	2 cut(s)	122, 200
SduI	GDGCHC	4 cut(s)	144, 663, 695, 911
SfaNI	GCATC	3 cut(s)	420, 1055, 1112
SfcI	CTRYAG	4 cut(s)	441, 626, 787, 957
SinI	GGWCC	1 cut(s)	507
SmiMI	CAYNNNNRTG	2 cut(s)	302, 467
SmlI	CTYRAG	1 cut(s)	389
SmoI	CTYRAG	1 cut(s)	389
Sse9I	AATT	2 cut(s)	74, 286
SsiI	CCGC	2 cut(s)	154, 415
SspMI	CTAG	3 cut(s)	522, 713, 812
SstI	GAGCTC	2 cut(s)	663, 911
StyD4I	CCNGG	2 cut(s)	120, 198
StyI	CCWWGG	1 cut(s)	105
TaaI	ACNGT	4 cut(s)	451, 492, 791, 933
TaiI	ACGT	2 cut(s)	162, 326
TaqI	TCGA	1 cut(s)	1032
TaqII	GACCGA	1 cut(s)	232
TasI	AATT	2 cut(s)	74, 286
TfiI	GAWTC	2 cut(s)	379, 622
Tru1I	TTAA	1 cut(s)	641
Tru9I	TTAA	1 cut(s)	641
TscAI	CASTG	5 cut(s)	175, 480, 495, 702, 796
TseFI	GTSAC	1 cut(s)	862
Tsp45I	GTSAC	1 cut(s)	862
TspDTI	ATGAA	6 cut(s)	229, 286, 543, 607, 854, 904
TspRI	CASTG	5 cut(s)	175, 480, 495, 702, 796
VpaK11BI	GGWCC	1 cut(s)	507
XapI	RAATTY	1 cut(s)	286
XmiI	GTMKAC	1 cut(s)	150
XspI	CTAG	3 cut(s)	522, 713, 812
Zsp2I	ATGCAT	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.