Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38040 AT2G38040 |
| fragaria_vesca | FvH4_6g12150 FvH4_6g12150 FvH4_6g12150 FvH4_6g12150 |
| malus_domestica | MD04G1146400.v1.1 MD12G1159600.v1.1 |
| prunus_persica | Prupe.6G270200_v2.0.a1 |
| pyrus_communis | pycom04g13200 pycom12g15130 |
| rosa_chinensis | RchiOBHm_Chr3g0463941 |
| rosa_laevigata | RLG00000024733 |
| rosa_multiflora | Rmu_co8513843.1_g000002 Rmu_sc0006492.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00416120 |
| rosa_rugosa | Rorug03G0069500 Rorug03G0069600 |
| rosa_samantha | Rh3AG126300 Rh3BG130300 Rh3CG132900 Rh3DG131700 |
| rosa_wichuraiana | Rw3G010670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 1115, 1358 |
| Acc65I | GGTACC | 1 cut(s) | 97 |
| AccB1I | GGYRCC | 2 cut(s) | 97, 887 |
| AccBSI | CCGCTC | 1 cut(s) | 548 |
| AccI | GTMKAC | 2 cut(s) | 1358, 1710 |
| AccII | CGCG | 3 cut(s) | 469, 1485, 1760 |
| AccIII | TCCGGA | 1 cut(s) | 2150 |
| AciI | CCGC | 9 cut(s) | 155, 548, 655, 1079, 1693, 1714, 1850, 1929, 2049 |
| AclI | AACGTT | 1 cut(s) | 601 |
| AclWI | GGATC | 1 cut(s) | 1094 |
| AcoI | YGGCCR | 1 cut(s) | 249 |
| AcsI | RAATTY | 3 cut(s) | 185, 1154, 1565 |
| AcuI | CTGAAG | 4 cut(s) | 42, 1346, 1458, 1838 |
| AcvI | CACGTG | 1 cut(s) | 2201 |
| AcyI | GRCGYC | 2 cut(s) | 1112, 1355 |
| AfaI | GTAC | 3 cut(s) | 99, 1205, 1433 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 141, 1085 |
| AflIII | ACRYGT | 3 cut(s) | 454, 606, 2145 |
| AgsI | TTSAA | 7 cut(s) | 9, 106, 259, 1570, 1675, 1946, 1958 |
| AhlI | ACTAGT | 1 cut(s) | 310 |
| AjiI | CACGTC | 1 cut(s) | 2148 |
| AjnI | CCWGG | 4 cut(s) | 246, 757, 1698, 2068 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1268, 1300 |
| Alw21I | GWGCWC | 4 cut(s) | 1182, 1518, 1766, 2178 |
| Alw26I | GTCTC | 3 cut(s) | 534, 1346, 1462 |
| AlwI | GGATC | 1 cut(s) | 1094 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 418, 1339 |
| Ama87I | CYCGRG | 1 cut(s) | 2177 |
| Aor13HI | TCCGGA | 1 cut(s) | 2150 |
| AoxI | GGCC | 4 cut(s) | 200, 249, 835, 1089 |
| ApaI | GGGCCC | 1 cut(s) | 1093 |
| ApoI | RAATTY | 3 cut(s) | 185, 1154, 1565 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1740, 1772 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1154, 1812, 1941 |
| Asp718I | GGTACC | 1 cut(s) | 97 |
| AspLEI | GCGC | 3 cut(s) | 469, 471, 1485 |
| AspS9I | GGNCC | 2 cut(s) | 1089, 1090 |
| AsuC2I | CCSGG | 2 cut(s) | 1529, 2275 |
| AsuHPI | GGTGA | 7 cut(s) | 169, 611, 812, 1322, 1969, 2011, 2068 |
| AvaI | CYCGRG | 1 cut(s) | 2177 |
| AxyI | CCTNAGG | 2 cut(s) | 112, 1002 |
| BaeGI | GKGCMC | 2 cut(s) | 892, 1093 |
| BanI | GGYRCC | 2 cut(s) | 97, 887 |
| BanII | GRGCYC | 4 cut(s) | 1093, 1182, 1766, 2178 |
| BbrPI | CACGTG | 1 cut(s) | 2201 |
| BbsI | GAAGAC | 2 cut(s) | 989, 1826 |
| Bbv12I | GWGCWC | 4 cut(s) | 1182, 1518, 1766, 2178 |
| BbvCI | CCTCAGC | 1 cut(s) | 1752 |
| BccI | CCATC | 9 cut(s) | 143, 343, 480, 587, 729, 1055, 1189, 1840, 2281 |
| BceAI | ACGGC | 3 cut(s) | 1265, 1491, 1926 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 898, 932 |
| BciT130I | CCWGG | 4 cut(s) | 248, 759, 1700, 2070 |
| BciVI | GTATCC | 2 cut(s) | 265, 1900 |
| BclI | TGATCA | 1 cut(s) | 496 |
| BcnI | CCSGG | 2 cut(s) | 1529, 2275 |
| BcoDI | GTCTC | 3 cut(s) | 534, 1346, 1462 |
| BcuI | ACTAGT | 1 cut(s) | 310 |
| BfaI | CTAG | 4 cut(s) | 26, 311, 893, 2207 |
| BfmI | CTRYAG | 4 cut(s) | 1304, 1707, 2156, 2211 |
| BfuI | GTATCC | 2 cut(s) | 265, 1900 |
| BglII | AGATCT | 3 cut(s) | 424, 772, 1920 |
| BlpI | GCTNAGC | 1 cut(s) | 1914 |
| Bme1390I | CCNGG | 6 cut(s) | 248, 759, 1529, 1700, 2070, 2275 |
| BmeT110I | CYCGRG | 1 cut(s) | 2177 |
| BmgBI | CACGTC | 1 cut(s) | 2148 |
| BmgT120I | GGNCC | 2 cut(s) | 1089, 1090 |
| BmiI | GGNNCC | 7 cut(s) | 99, 586, 763, 889, 1090, 1091, 1697 |
| BmrFI | CCNGG | 6 cut(s) | 248, 759, 1529, 1700, 2070, 2275 |
| BmsI | GCATC | 5 cut(s) | 202, 445, 912, 1664, 1786 |
| BpiI | GAAGAC | 2 cut(s) | 989, 1826 |
| BpmI | CTGGAG | 2 cut(s) | 780, 1895 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1628, 1752, 1765 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1914 |
| BpuEI | CTTGAG | 3 cut(s) | 155, 1541, 2126 |
| BpuMI | CCSGG | 2 cut(s) | 1529, 2275 |
| BsaAI | YACGTR | 1 cut(s) | 2201 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1133 |
| BsaHI | GRCGYC | 2 cut(s) | 1112, 1355 |
| BsaI | GGTCTC | 1 cut(s) | 534 |
| BsaJI | CCNNGG | 4 cut(s) | 197, 783, 1032, 1347 |
| BsaWI | WCCGGW | 1 cut(s) | 2150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 389, 419 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 141, 1085 |
| Bse1I | ACTGG | 1 cut(s) | 951 |
| Bse21I | CCTNAGG | 2 cut(s) | 112, 1002 |
| Bse3DI | GCAATG | 3 cut(s) | 88, 462, 1485 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1133 |
| BseAI | TCCGGA | 1 cut(s) | 2150 |
| BseBI | CCWGG | 4 cut(s) | 248, 759, 1700, 2070 |
| BseDI | CCNNGG | 4 cut(s) | 197, 783, 1032, 1347 |
| BseGI | GGATG | 4 cut(s) | 193, 472, 708, 1200 |
| BseJI | GATNNNNATC | 1 cut(s) | 1133 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 141, 1085 |
| BseMI | GCAATG | 3 cut(s) | 88, 462, 1485 |
| BseMII | CTCAG | 7 cut(s) | 369, 812, 993, 1302, 1743, 1779, 1905 |
| BseNI | ACTGG | 1 cut(s) | 951 |
| BsePI | GCGCGC | 1 cut(s) | 467 |
| BseRI | GAGGAG | 6 cut(s) | 51, 246, 666, 1190, 1478, 2006 |
| BseSI | GKGCMC | 2 cut(s) | 892, 1093 |
| BseYI | CCCAGC | 1 cut(s) | 2297 |
| BsgI | GTGCAG | 2 cut(s) | 987, 2181 |
| Bsh1236I | CGCG | 3 cut(s) | 469, 1485, 1760 |
| BshFI | GGCC | 4 cut(s) | 202, 251, 837, 1091 |
| BshNI | GGYRCC | 2 cut(s) | 97, 887 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1182, 1518, 1766, 2178 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2177 |
| BsiSI | CCGG | 4 cut(s) | 1297, 1529, 2151, 2274 |
| BslFI | GGGAC | 1 cut(s) | 1646 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 141, 1085 |
| BsmAI | GTCTC | 3 cut(s) | 534, 1346, 1462 |
| BsmBI | CGTCTC | 1 cut(s) | 1346 |
| BsmFI | GGGAC | 1 cut(s) | 1646 |
| BsmI | GAATGC | 1 cut(s) | 16 |
| BsnI | GGCC | 4 cut(s) | 202, 251, 837, 1091 |
| Bso31I | GGTCTC | 1 cut(s) | 534 |
| BsoBI | CYCGRG | 1 cut(s) | 2177 |
| Bsp120I | GGGCCC | 1 cut(s) | 1089 |
| Bsp1286I | GDGCHC | 6 cut(s) | 892, 1093, 1182, 1518, 1766, 2178 |
| Bsp13I | TCCGGA | 1 cut(s) | 2150 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1914 |
| Bsp19I | CCATGG | 1 cut(s) | 197 |
| Bsp68I | TCGCGA | 1 cut(s) | 1760 |
| BspACI | CCGC | 9 cut(s) | 155, 548, 655, 1079, 1693, 1714, 1850, 1929, 2049 |
| BspANI | GGCC | 4 cut(s) | 202, 251, 837, 1091 |
| BspCNI | CTCAG | 7 cut(s) | 370, 813, 994, 1301, 1744, 1778, 1906 |
| BspEI | TCCGGA | 1 cut(s) | 2150 |
| BspFNI | CGCG | 3 cut(s) | 469, 1485, 1760 |
| BspLI | GGNNCC | 7 cut(s) | 99, 586, 763, 889, 1090, 1091, 1697 |
| BspMAI | CTGCAG | 3 cut(s) | 1308, 2160, 2215 |
| BspPI | GGATC | 1 cut(s) | 1094 |
| BspQI | GCTCTTC | 2 cut(s) | 112, 1506 |
| BspT107I | GGYRCC | 2 cut(s) | 97, 887 |
| BspTNI | GGTCTC | 1 cut(s) | 534 |
| BsrBI | CCGCTC | 1 cut(s) | 548 |
| BsrDI | GCAATG | 3 cut(s) | 88, 462, 1485 |
| BsrI | ACTGG | 1 cut(s) | 951 |
| BssECI | CCNNGG | 4 cut(s) | 197, 783, 1032, 1347 |
| BssHII | GCGCGC | 1 cut(s) | 467 |
| BssNI | GRCGYC | 2 cut(s) | 1112, 1355 |
| BssT1I | CCWWGG | 3 cut(s) | 197, 1032, 1347 |
| Bst2UI | CCWGG | 4 cut(s) | 248, 759, 1700, 2070 |
| Bst4CI | ACNGT | 1 cut(s) | 728 |
| Bst6I | CTCTTC | 3 cut(s) | 112, 1482, 1506 |
| BstACI | GRCGYC | 2 cut(s) | 1112, 1355 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1522 |
| BstBAI | YACGTR | 1 cut(s) | 2201 |
| BstC8I | GCNNGC | 5 cut(s) | 204, 469, 1762, 2059, 2190 |
| BstDSI | CCRYGG | 1 cut(s) | 197 |
| BstEII | GGTNACC | 1 cut(s) | 617 |
| BstF5I | GGATG | 4 cut(s) | 193, 472, 708, 1200 |
| BstFNI | CGCG | 3 cut(s) | 469, 1485, 1760 |
| BstHHI | GCGC | 3 cut(s) | 469, 471, 1485 |
| BstMAI | GTCTC | 3 cut(s) | 534, 1346, 1462 |
| BstNI | CCWGG | 4 cut(s) | 248, 759, 1700, 2070 |
| BstNSI | RCATGY | 3 cut(s) | 610, 966, 1627 |
| BstPI | GGTNACC | 1 cut(s) | 617 |
| BstSCI | CCNGG | 6 cut(s) | 246, 757, 1527, 1698, 2068, 2273 |
| BstSFI | CTRYAG | 4 cut(s) | 1304, 1707, 2156, 2211 |
| BstSLI | GKGCMC | 2 cut(s) | 892, 1093 |
| BstUI | CGCG | 3 cut(s) | 469, 1485, 1760 |
| BstV2I | GAAGAC | 2 cut(s) | 989, 1826 |
| BstX2I | RGATCY | 3 cut(s) | 424, 772, 1920 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1039 |
| BstYI | RGATCY | 3 cut(s) | 424, 772, 1920 |
| Bsu36I | CCTNAGG | 2 cut(s) | 112, 1002 |
| BsuI | GTATCC | 2 cut(s) | 265, 1900 |
| BsuRI | GGCC | 4 cut(s) | 202, 251, 837, 1091 |
| BtgI | CCRYGG | 1 cut(s) | 197 |
| BtrI | CACGTC | 1 cut(s) | 2148 |
| BtsCI | GGATG | 4 cut(s) | 193, 472, 708, 1200 |
| BtsI | GCAGTG | 1 cut(s) | 129 |
| BtsIMutI | CAGTG | 5 cut(s) | 129, 375, 416, 1434, 1799 |
| BtuMI | TCGCGA | 1 cut(s) | 1760 |
| Cac8I | GCNNGC | 5 cut(s) | 204, 469, 1762, 2059, 2190 |
| CaiI | CAGNNNCTG | 2 cut(s) | 418, 1339 |
| CfoI | GCGC | 3 cut(s) | 469, 471, 1485 |
| Cfr13I | GGNCC | 2 cut(s) | 1089, 1090 |
| CseI | GACGC | 2 cut(s) | 1595, 1892 |
| Csp6I | GTAC | 3 cut(s) | 98, 1204, 1432 |
| CviQI | GTAC | 3 cut(s) | 98, 1204, 1432 |
| EaeI | YGGCCR | 1 cut(s) | 249 |
| Eam1104I | CTCTTC | 3 cut(s) | 112, 1482, 1506 |
| EarI | CTCTTC | 3 cut(s) | 112, 1482, 1506 |
| Ecl136II | GAGCTC | 3 cut(s) | 1180, 1764, 2176 |
| Eco130I | CCWWGG | 3 cut(s) | 197, 1032, 1347 |
| Eco24I | GRGCYC | 4 cut(s) | 1093, 1182, 1766, 2178 |
| Eco31I | GGTCTC | 1 cut(s) | 534 |
| Eco53kI | GAGCTC | 3 cut(s) | 1180, 1764, 2176 |
| Eco57I | CTGAAG | 4 cut(s) | 42, 1346, 1458, 1838 |
| Eco72I | CACGTG | 1 cut(s) | 2201 |
| Eco81I | CCTNAGG | 2 cut(s) | 112, 1002 |
| Eco88I | CYCGRG | 1 cut(s) | 2177 |
| Eco91I | GGTNACC | 1 cut(s) | 617 |
| EcoICRI | GAGCTC | 3 cut(s) | 1180, 1764, 2176 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1089 |
| EcoO65I | GGTNACC | 1 cut(s) | 617 |
| EcoRI | GAATTC | 2 cut(s) | 1154, 1565 |
| EcoRII | CCWGG | 4 cut(s) | 246, 757, 1698, 2068 |
| EcoT14I | CCWWGG | 3 cut(s) | 197, 1032, 1347 |
| EcoT38I | GRGCYC | 4 cut(s) | 1093, 1182, 1766, 2178 |
| ErhI | CCWWGG | 3 cut(s) | 197, 1032, 1347 |
| Esp3I | CGTCTC | 1 cut(s) | 1346 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1503, 1535, 1938, 1970 |
| FaqI | GGGAC | 1 cut(s) | 1646 |
| FauI | CCCGC | 2 cut(s) | 541, 1843 |
| FbaI | TGATCA | 1 cut(s) | 496 |
| FblI | GTMKAC | 2 cut(s) | 1358, 1710 |
| FokI | GGATG | 4 cut(s) | 180, 459, 715, 1207 |
| FriOI | GRGCYC | 4 cut(s) | 1093, 1182, 1766, 2178 |
| FspBI | CTAG | 4 cut(s) | 26, 311, 893, 2207 |
| GlaI | GCGC | 3 cut(s) | 468, 470, 1484 |
| GsaI | CCCAGC | 1 cut(s) | 2301 |
| GsuI | CTGGAG | 2 cut(s) | 780, 1895 |
| HaeIII | GGCC | 4 cut(s) | 202, 251, 837, 1091 |
| HapII | CCGG | 4 cut(s) | 1297, 1529, 2151, 2274 |
| HgaI | GACGC | 2 cut(s) | 1595, 1892 |
| HhaI | GCGC | 3 cut(s) | 469, 471, 1485 |
| Hin1I | GRCGYC | 2 cut(s) | 1112, 1355 |
| Hin6I | GCGC | 3 cut(s) | 467, 469, 1483 |
| HinP1I | GCGC | 3 cut(s) | 467, 469, 1483 |
| HincII | GTYRAC | 2 cut(s) | 1318, 2293 |
| HindII | GTYRAC | 2 cut(s) | 1318, 2293 |
| HindIII | AAGCTT | 3 cut(s) | 1016, 1046, 1616 |
| HinfI | GANTC | 6 cut(s) | 234, 1065, 1336, 1897, 2219, 2270 |
| HpaI | GTTAAC | 1 cut(s) | 2293 |
| HpaII | CCGG | 4 cut(s) | 1297, 1529, 2151, 2274 |
| HphI | GGTGA | 7 cut(s) | 169, 611, 812, 1322, 1969, 2011, 2068 |
| Hpy166II | GTNNAC | 8 cut(s) | 129, 460, 1318, 1359, 1434, 1711, 2204, 2293 |
| Hpy8I | GTNNAC | 8 cut(s) | 129, 460, 1318, 1359, 1434, 1711, 2204, 2293 |
| Hpy99I | CGWCG | 1 cut(s) | 1117 |
| HpyAV | CCTTC | 9 cut(s) | 139, 866, 1113, 1321, 1383, 1897, 1952, 2176, 2230 |
| HpyCH4III | ACNGT | 1 cut(s) | 728 |
| HpyCH4IV | ACGT | 6 cut(s) | 454, 601, 1112, 1355, 2147, 2200 |
| HpySE526I | ACGT | 6 cut(s) | 454, 601, 1112, 1355, 2147, 2200 |
| Hsp92I | GRCGYC | 2 cut(s) | 1112, 1355 |
| HspAI | GCGC | 3 cut(s) | 467, 469, 1483 |
| Kpn2I | TCCGGA | 1 cut(s) | 2150 |
| KpnI | GGTACC | 1 cut(s) | 101 |
| Ksp22I | TGATCA | 1 cut(s) | 496 |
| KspAI | GTTAAC | 1 cut(s) | 2293 |
| LguI | GCTCTTC | 2 cut(s) | 112, 1506 |
| LweI | GCATC | 5 cut(s) | 202, 445, 912, 1664, 1786 |
| MaeI | CTAG | 4 cut(s) | 26, 311, 893, 2207 |
| MaeII | ACGT | 6 cut(s) | 454, 601, 1112, 1355, 2147, 2200 |
| MaeIII | GTNAC | 8 cut(s) | 157, 286, 571, 602, 617, 739, 1788, 2074 |
| MbiI | CCGCTC | 1 cut(s) | 548 |
| MfeI | CAATTG | 1 cut(s) | 567 |
| MflI | RGATCY | 3 cut(s) | 424, 772, 1920 |
| MhlI | GDGCHC | 6 cut(s) | 892, 1093, 1182, 1518, 1766, 2178 |
| MluCI | AATT | 9 cut(s) | 185, 317, 567, 849, 1023, 1154, 1545, 1565, 1722 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MmeI | TCCRAC | 1 cut(s) | 348 |
| MroI | TCCGGA | 1 cut(s) | 2150 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1154, 1812, 1941 |
| MseI | TTAA | 8 cut(s) | 90, 777, 1050, 1389, 1620, 1859, 1890, 2292 |
| MspA1I | CMGCKG | 1 cut(s) | 2195 |
| MspI | CCGG | 4 cut(s) | 1297, 1529, 2151, 2274 |
| MspR9I | CCNGG | 6 cut(s) | 248, 759, 1529, 1700, 2070, 2275 |
| MunI | CAATTG | 1 cut(s) | 567 |
| Mva1269I | GAATGC | 1 cut(s) | 16 |
| MvaI | CCWGG | 4 cut(s) | 248, 759, 1700, 2070 |
| MvnI | CGCG | 3 cut(s) | 469, 1485, 1760 |
| NciI | CCSGG | 2 cut(s) | 1529, 2275 |
| NcoI | CCATGG | 1 cut(s) | 197 |
| NlaIV | GGNNCC | 7 cut(s) | 99, 586, 763, 889, 1090, 1091, 1697 |
| NmeAIII | GCCGAG | 3 cut(s) | 145, 277, 1393 |
| NmuCI | GTSAC | 6 cut(s) | 157, 286, 571, 617, 739, 2074 |
| NruI | TCGCGA | 1 cut(s) | 1760 |
| NspI | RCATGY | 3 cut(s) | 610, 966, 1627 |
| PaeR7I | CTCGAG | 1 cut(s) | 2177 |
| PauI | GCGCGC | 1 cut(s) | 467 |
| PciI | ACATGT | 1 cut(s) | 606 |
| PciSI | GCTCTTC | 2 cut(s) | 112, 1506 |
| PctI | GAATGC | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1154, 1812, 1941 |
| PfeI | GAWTC | 5 cut(s) | 1065, 1336, 1897, 2219, 2270 |
| PfoI | TCCNGGA | 3 cut(s) | 757, 1698, 2273 |
| PleI | GAGTC | 1 cut(s) | 242 |
| PmaCI | CACGTG | 1 cut(s) | 2201 |
| PmlI | CACGTG | 1 cut(s) | 2201 |
| PpsI | GAGTC | 1 cut(s) | 242 |
| Ppu21I | YACGTR | 1 cut(s) | 2201 |
| PscI | ACATGT | 1 cut(s) | 606 |
| Psp124BI | GAGCTC | 3 cut(s) | 1182, 1766, 2178 |
| Psp1406I | AACGTT | 1 cut(s) | 601 |
| Psp6I | CCWGG | 4 cut(s) | 246, 757, 1698, 2068 |
| PspCI | CACGTG | 1 cut(s) | 2201 |
| PspEI | GGTNACC | 1 cut(s) | 617 |
| PspFI | CCCAGC | 1 cut(s) | 2297 |
| PspGI | CCWGG | 4 cut(s) | 246, 757, 1698, 2068 |
| PspN4I | GGNNCC | 7 cut(s) | 99, 586, 763, 889, 1090, 1091, 1697 |
| PspOMI | GGGCCC | 1 cut(s) | 1089 |
| PspPI | GGNCC | 2 cut(s) | 1089, 1090 |
| PstI | CTGCAG | 3 cut(s) | 1308, 2160, 2215 |
| PstNI | CAGNNNCTG | 2 cut(s) | 418, 1339 |
| PsuI | RGATCY | 3 cut(s) | 424, 772, 1920 |
| PteI | GCGCGC | 1 cut(s) | 467 |
| PvuII | CAGCTG | 1 cut(s) | 2195 |
| RruI | TCGCGA | 1 cut(s) | 1760 |
| RsaI | GTAC | 3 cut(s) | 99, 1205, 1433 |
| RsaNI | GTAC | 3 cut(s) | 98, 1204, 1432 |
| SacI | GAGCTC | 3 cut(s) | 1182, 1766, 2178 |
| SapI | GCTCTTC | 2 cut(s) | 112, 1506 |
| SaqAI | TTAA | 8 cut(s) | 90, 777, 1050, 1389, 1620, 1859, 1890, 2292 |
| Sau96I | GGNCC | 2 cut(s) | 1089, 1090 |
| SchI | GAGTC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 6 cut(s) | 248, 759, 1529, 1700, 2070, 2275 |
| SduI | GDGCHC | 6 cut(s) | 892, 1093, 1182, 1518, 1766, 2178 |
| SfaNI | GCATC | 5 cut(s) | 202, 445, 912, 1664, 1786 |
| SfcI | CTRYAG | 4 cut(s) | 1304, 1707, 2156, 2211 |
| Sfr274I | CTCGAG | 1 cut(s) | 2177 |
| SlaI | CTCGAG | 1 cut(s) | 2177 |
| SmlI | CTYRAG | 4 cut(s) | 170, 1556, 2105, 2177 |
| SmoI | CTYRAG | 4 cut(s) | 170, 1556, 2105, 2177 |
| SpeI | ACTAGT | 1 cut(s) | 310 |
| Sse9I | AATT | 9 cut(s) | 185, 317, 567, 849, 1023, 1154, 1545, 1565, 1722 |
| SsiI | CCGC | 9 cut(s) | 155, 548, 655, 1079, 1693, 1714, 1850, 1929, 2049 |
| SspMI | CTAG | 4 cut(s) | 26, 311, 893, 2207 |
| SstI | GAGCTC | 3 cut(s) | 1182, 1766, 2178 |
| StyD4I | CCNGG | 6 cut(s) | 246, 757, 1527, 1698, 2068, 2273 |
| StyI | CCWWGG | 3 cut(s) | 197, 1032, 1347 |
| TaaI | ACNGT | 1 cut(s) | 728 |
| TaiI | ACGT | 6 cut(s) | 457, 604, 1115, 1358, 2150, 2203 |
| TaqII | GACCGA | 1 cut(s) | 558 |
| TasI | AATT | 9 cut(s) | 185, 317, 567, 849, 1023, 1154, 1545, 1565, 1722 |
| TatI | WGTACW | 1 cut(s) | 1431 |
| TauI | GCSGC | 1 cut(s) | 1931 |
| TfiI | GAWTC | 5 cut(s) | 1065, 1336, 1897, 2219, 2270 |
| Tru1I | TTAA | 8 cut(s) | 90, 777, 1050, 1389, 1620, 1859, 1890, 2292 |
| Tru9I | TTAA | 8 cut(s) | 90, 777, 1050, 1389, 1620, 1859, 1890, 2292 |
| TscAI | CASTG | 5 cut(s) | 129, 382, 423, 1441, 1806 |
| TseFI | GTSAC | 6 cut(s) | 157, 286, 571, 617, 739, 2074 |
| Tsp45I | GTSAC | 6 cut(s) | 157, 286, 571, 617, 739, 2074 |
| TspGWI | ACGGA | 2 cut(s) | 696, 1376 |
| TspRI | CASTG | 5 cut(s) | 129, 382, 423, 1441, 1806 |
| XapI | RAATTY | 3 cut(s) | 185, 1154, 1565 |
| XceI | RCATGY | 3 cut(s) | 610, 966, 1627 |
| XhoI | CTCGAG | 1 cut(s) | 2177 |
| XmiI | GTMKAC | 2 cut(s) | 1358, 1710 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1154, 1812, 1941 |
| XspI | CTAG | 4 cut(s) | 26, 311, 893, 2207 |
| ZraI | GACGTC | 2 cut(s) | 1113, 1356 |