pycom04g13200

Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
16187351 .. 16190201
2851 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g13200.3

Sequence Viewer

Length: 1320 bp
ATGGCTTCGATATCTCATTCTCCACTGGCGTTTGCTGGAACAAGCACCGCTTCGGATCTTTTCCGGAGCTCCAGTAATGGCGTCAGCGGTGTTCCGTTGAGAGCTTTAGGGAAGGTGCGGTTGGGCATGAGGAGGAACGTTGTGTTGGCCGCCAAGCTCAGGAAGGTGAAGAAGCACGAGTACCCCTGGCCTGAGGATCCCGATCCGAATGTCAAAGGTGGAGTCCTCACTCATCTCTCTCACTTCAAGCCATTGAAGGAGAAGCCCAAGCCGGTTACTTTGCCGTTTGAGAAGCCGCTTGTTGATATCGAAAAGAAGATCATTGATGTGCGGAAGATGGCGAACGAAACTGGGCTGGACTTCAGTGATCAAATTATTTCACTGGAGAATAAATACAACCAGGCTTTAAAGGATTTATATACGAATCTGACTCCTATACAACGCGTGAATATTGCACGACATCCTAACAGGCCAACTTTCCTTGACCATGTGTTTAACATTACTGATAAGTTTGTAGAGCTTCATGGGGACCGAGCAGGGTATGATGATCGTCCTATTGTCACTGGTATAGGAACTATAGATGGTAGAAGGTATATGTTCATGGGTCACCAGAAAGGTAGAAATACGAAGGAGAATATTATGCGTAACTTTGGGATGCCTACTCCTCACGGTTACCGGAAAGCTTTGCGCATGATGTACTATGCAGATCACCATGGTTTCCCAATTGTTACTTTCATCGATACCCCTGGTGCATATGCAGACCTTAAATCTGAGGAACTGGGCCAAGGTGAAGCCATAGCTCACAACTTGCGGACTATGTTTGGCCTGAAAGTACCTATTGTCTCCATTGTCATGGGAGAAGGTGGCTCTGGTGGTGCCCTTGCCATTGGCTGTGCTAATACATTACTAATGCTTGAAAATGCAGTTTTCTATGTTGCCAGTCCAGAAGCATGCGCAGCAATCTTGTGGAAGAGTTCTAAAGCTTCTCCAAAGGCTGCTGAAAAGCTGAAAATTACTGCAACTGAGTTGTGCAAGCTGCAAATTGCAGATGGAGTCATCCCTGAGCCGCTTGGCGGCGCGCATGCGGATCCTGCATGGACCTCTCAACAGATCAAAAATGCAATTAACAAAGAAATGGATGAGCTCCATAAGTTGGACACAGAAGCATTACTAAAGCATCGCATGATGAAGTTCCGGAAAATTGGTGGGTTCCAAGAAGGAATTCCTCAAATTAAAGATCGATCCAAAGAAGAAAAAGAACATGAAACCAAAAGAGGAGCCTGTCCATGTGAAGACTCCGGTTGTAGATTTGGAGGGTGA

Protein Analysis

440

Amino Acids

48.6

Weight (kDa)

9.24

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 689, 955
AccB1I GGYRCC 1 cut(s) 875
AccB7I CCANNNNNTGG 1 cut(s) 1153
AccII CGCG 2 cut(s) 444, 1079
AccIII TCCGGA 2 cut(s) 63, 1194
AclI AACGTT 1 cut(s) 138
AclWI GGATC 7 cut(s) 63, 191, 197, 204, 1082, 1095, 1236
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 1 cut(s) 1221
AcuI CTGAAG 1 cut(s) 346
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 3 cut(s) 182, 698, 834
AfiI CCNNNNNNNGG 3 cut(s) 159, 1073, 1153
AflIII ACRYGT 1 cut(s) 442
AgsI TTSAA 3 cut(s) 247, 256, 917
AjnI CCWGG 3 cut(s) 185, 399, 745
AjuI GAANNNNNNNTTGG 6 cut(s) 104, 128, 136, 160, 1206, 1238
Alw21I GWGCWC 2 cut(s) 71, 1146
Alw26I GTCTC 1 cut(s) 847
AlwI GGATC 7 cut(s) 63, 191, 197, 204, 1082, 1095, 1236
Aor13HI TCCGGA 2 cut(s) 63, 1194
AoxI GGCC 5 cut(s) 147, 188, 470, 781, 823
ApeKI GCWGC 3 cut(s) 956, 995, 1036
ApoI RAATTY 1 cut(s) 1221
ArsI GACNNNNNNTTYG 2 cut(s) 207, 239
Asp700I GAANNNNTTC 1 cut(s) 1221
AspLEI GCGC 4 cut(s) 690, 956, 1079, 1081
AspS9I GGNCC 3 cut(s) 529, 781, 1098
AsuHPI GGTGA 4 cut(s) 178, 599, 701, 800
AvaII GGWCC 2 cut(s) 529, 1098
AxyI CCTNAGG 1 cut(s) 192
BaeGI GKGCMC 1 cut(s) 880
BamHI GGATCC 2 cut(s) 196, 1087
BanI GGYRCC 1 cut(s) 875
BanII GRGCYC 2 cut(s) 71, 1146
BarI GAAGNNNNNNTAC 2 cut(s) 164, 196
BauI CACGAG 1 cut(s) 176
BbsI GAAGAC 1 cut(s) 1299
Bbv12I GWGCWC 2 cut(s) 71, 1146
BbvI GCAGC 3 cut(s) 968, 982, 1023
BccI CCATC 3 cut(s) 331, 575, 1043
BceAI ACGGC 1 cut(s) 268
BciT130I CCWGG 3 cut(s) 187, 401, 747
BclI TGATCA 1 cut(s) 367
BcoDI GTCTC 1 cut(s) 847
BfmI CTRYAG 1 cut(s) 576
BisI GCNGC 7 cut(s) 150, 296, 957, 996, 1037, 1067, 1075
BlsI GCNGC 7 cut(s) 151, 297, 958, 997, 1038, 1068, 1076
Bme1390I CCNGG 3 cut(s) 187, 401, 747
Bme18I GGWCC 2 cut(s) 529, 1098
BmgT120I GGNCC 3 cut(s) 529, 781, 1098
BmiI GGNNCC 6 cut(s) 198, 530, 877, 1089, 1211, 1279
BmrFI CCNGG 3 cut(s) 187, 401, 747
BmrI ACTGGG 2 cut(s) 360, 788
BmsI GCATC 2 cut(s) 645, 1186
BmuI ACTGGG 2 cut(s) 360, 788
BpiI GAAGAC 1 cut(s) 1299
BpmI CTGGAG 2 cut(s) 55, 404
Bpu10I CCTNAGC 2 cut(s) 158, 1062
Bsa29I ATCGAT 2 cut(s) 738, 1240
BsaBI GATNNNNATC 1 cut(s) 201
BsaHI GRCGYC 1 cut(s) 81
BsaJI CCNNGG 4 cut(s) 185, 712, 745, 784
BsaWI WCCGGW 4 cut(s) 63, 675, 1194, 1298
BsaXI ACNNNNNCTCC 2 cut(s) 58, 88
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 1073, 1153
Bse118I RCCGGY 1 cut(s) 271
Bse1I ACTGG 7 cut(s) 30, 72, 355, 387, 568, 783, 939
Bse21I CCTNAGG 1 cut(s) 192
Bse8I GATNNNNATC 1 cut(s) 201
BseAI TCCGGA 2 cut(s) 63, 1194
BseBI CCWGG 3 cut(s) 187, 401, 747
BseCI ATCGAT 2 cut(s) 738, 1240
BseDI CCNNGG 4 cut(s) 185, 712, 745, 784
BseGI GGATG 4 cut(s) 460, 660, 1056, 1144
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 3 cut(s) 159, 1073, 1153
BseMII CTCAG 5 cut(s) 172, 183, 762, 1014, 1053
BseNI ACTGG 7 cut(s) 30, 72, 355, 387, 568, 783, 939
BsePI GCGCGC 1 cut(s) 1077
BseRI GAGGAG 3 cut(s) 145, 654, 1290
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 3 cut(s) 968, 982, 1023
Bsh1236I CGCG 2 cut(s) 444, 1079
BshFI GGCC 5 cut(s) 149, 190, 472, 783, 825
BshNI GGYRCC 1 cut(s) 875
BshVI ATCGAT 2 cut(s) 738, 1240
BsiHKAI GWGCWC 2 cut(s) 71, 1146
BsiSI CCGG 5 cut(s) 64, 272, 676, 1195, 1299
BslFI GGGAC 1 cut(s) 542
BslI CCNNNNNNNGG 3 cut(s) 159, 1073, 1153
BsmAI GTCTC 1 cut(s) 847
BsmFI GGGAC 1 cut(s) 542
BsnI GGCC 5 cut(s) 149, 190, 472, 783, 825
Bsp1286I GDGCHC 3 cut(s) 71, 880, 1146
Bsp13I TCCGGA 2 cut(s) 63, 1194
Bsp19I CCATGG 1 cut(s) 712
BspANI GGCC 5 cut(s) 149, 190, 472, 783, 825
BspCNI CTCAG 5 cut(s) 171, 184, 763, 1015, 1054
BspDI ATCGAT 2 cut(s) 738, 1240
BspEI TCCGGA 2 cut(s) 63, 1194
BspFNI CGCG 2 cut(s) 444, 1079
BspLI GGNNCC 6 cut(s) 198, 530, 877, 1089, 1211, 1279
BspPI GGATC 7 cut(s) 63, 191, 197, 204, 1082, 1095, 1236
BspT107I GGYRCC 1 cut(s) 875
BsrFI RCCGGY 1 cut(s) 271
BsrI ACTGG 7 cut(s) 30, 72, 355, 387, 568, 783, 939
BssAI RCCGGY 1 cut(s) 271
BssECI CCNNGG 4 cut(s) 185, 712, 745, 784
BssHII GCGCGC 1 cut(s) 1077
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 1 cut(s) 176
BssT1I CCWWGG 2 cut(s) 712, 784
Bst2BI CACGAG 1 cut(s) 176
Bst2UI CCWGG 3 cut(s) 187, 401, 747
Bst4CI ACNGT 1 cut(s) 671
Bst6I CTCTTC 1 cut(s) 965
BstACI GRCGYC 1 cut(s) 81
BstC8I GCNNGC 4 cut(s) 952, 1034, 1079, 1083
BstDEI CTNAG 5 cut(s) 158, 192, 771, 1023, 1062
BstDSI CCRYGG 1 cut(s) 712
BstEII GGTNACC 2 cut(s) 605, 671
BstF5I GGATG 4 cut(s) 460, 660, 1056, 1144
BstFNI CGCG 2 cut(s) 444, 1079
BstHHI GCGC 4 cut(s) 690, 956, 1079, 1081
BstMAI GTCTC 1 cut(s) 847
BstMWI GCNNNNNNNGC 2 cut(s) 956, 1091
BstNI CCWGG 3 cut(s) 187, 401, 747
BstNSI RCATGY 2 cut(s) 954, 1085
BstPI GGTNACC 2 cut(s) 605, 671
BstSCI CCNGG 3 cut(s) 185, 399, 745
BstSFI CTRYAG 1 cut(s) 576
BstSLI GKGCMC 1 cut(s) 880
BstUI CGCG 2 cut(s) 444, 1079
BstV1I GCAGC 3 cut(s) 968, 982, 1023
BstV2I GAAGAC 1 cut(s) 1299
BstX2I RGATCY 3 cut(s) 55, 196, 1087
BstXI CCANNNNNNTGG 1 cut(s) 853
BstYI RGATCY 3 cut(s) 55, 196, 1087
Bsu15I ATCGAT 2 cut(s) 738, 1240
Bsu36I CCTNAGG 1 cut(s) 192
BsuRI GGCC 5 cut(s) 149, 190, 472, 783, 825
BsuTUI ATCGAT 2 cut(s) 738, 1240
BtgI CCRYGG 1 cut(s) 712
BtgZI GCGATG 1 cut(s) 1163
BtsCI GGATG 4 cut(s) 460, 660, 1056, 1144
BtsIMutI CAGTG 4 cut(s) 23, 370, 380, 561
Cac8I GCNNGC 4 cut(s) 952, 1034, 1079, 1083
CfoI GCGC 4 cut(s) 690, 956, 1079, 1081
Cfr10I RCCGGY 1 cut(s) 271
Cfr13I GGNCC 3 cut(s) 529, 781, 1098
ClaI ATCGAT 2 cut(s) 738, 1240
CseI GACGC 1 cut(s) 70
Csp6I GTAC 3 cut(s) 181, 697, 833
CviQI GTAC 3 cut(s) 181, 697, 833
DdeI CTNAG 5 cut(s) 158, 192, 771, 1023, 1062
DraI TTTAAA 1 cut(s) 408
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 965
EarI CTCTTC 1 cut(s) 965
Ecl136II GAGCTC 2 cut(s) 69, 1144
Eco130I CCWWGG 2 cut(s) 712, 784
Eco24I GRGCYC 2 cut(s) 71, 1146
Eco32I GATATC 2 cut(s) 12, 307
Eco47I GGWCC 2 cut(s) 529, 1098
Eco53kI GAGCTC 2 cut(s) 69, 1144
Eco57I CTGAAG 1 cut(s) 346
Eco81I CCTNAGG 1 cut(s) 192
Eco91I GGTNACC 2 cut(s) 605, 671
EcoICRI GAGCTC 2 cut(s) 69, 1144
EcoO65I GGTNACC 2 cut(s) 605, 671
EcoRI GAATTC 1 cut(s) 1221
EcoRII CCWGG 3 cut(s) 185, 399, 745
EcoRV GATATC 2 cut(s) 12, 307
EcoT14I CCWWGG 2 cut(s) 712, 784
EcoT38I GRGCYC 2 cut(s) 71, 1146
ErhI CCWWGG 2 cut(s) 712, 784
FalI AAGNNNNNCTT 2 cut(s) 34, 66
FaqI GGGAC 1 cut(s) 542
FauNDI CATATG 1 cut(s) 754
FbaI TGATCA 1 cut(s) 367
Fnu4HI GCNGC 7 cut(s) 150, 296, 957, 996, 1037, 1067, 1075
FokI GGATG 4 cut(s) 447, 667, 1043, 1151
FriOI GRGCYC 2 cut(s) 71, 1146
Fsp4HI GCNGC 7 cut(s) 150, 296, 957, 996, 1037, 1067, 1075
FspI TGCGCA 2 cut(s) 689, 955
GlaI GCGC 4 cut(s) 689, 955, 1078, 1080
GluI GCNGC 7 cut(s) 150, 296, 957, 996, 1037, 1067, 1075
GsuI CTGGAG 2 cut(s) 55, 404
HaeIII GGCC 5 cut(s) 149, 190, 472, 783, 825
HapII CCGG 5 cut(s) 64, 272, 676, 1195, 1299
HgaI GACGC 1 cut(s) 70
HhaI GCGC 4 cut(s) 690, 956, 1079, 1081
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 4 cut(s) 688, 954, 1077, 1079
HinP1I GCGC 4 cut(s) 688, 954, 1077, 1079
HindIII AAGCTT 2 cut(s) 681, 981
HinfI GANTC 5 cut(s) 222, 424, 430, 1053, 1295
HpaII CCGG 5 cut(s) 64, 272, 676, 1195, 1299
HphI GGTGA 4 cut(s) 178, 599, 701, 800
Hpy188I TCNGA 4 cut(s) 55, 207, 429, 772
Hpy188III TCNNGA 5 cut(s) 64, 160, 200, 944, 1195
HpyAV CCTTC 7 cut(s) 106, 157, 250, 582, 622, 854, 1211
HpyCH4III ACNGT 1 cut(s) 671
HpyCH4IV ACGT 1 cut(s) 138
HpyF10VI GCNNNNNNNGC 2 cut(s) 956, 1091
HpyF3I CTNAG 5 cut(s) 158, 192, 771, 1023, 1062
HpySE526I ACGT 1 cut(s) 138
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 4 cut(s) 688, 954, 1077, 1079
Kpn2I TCCGGA 2 cut(s) 63, 1194
Ksp22I TGATCA 1 cut(s) 367
LmnI GCTCC 4 cut(s) 66, 74, 1149, 1277
Lsp1109I GCAGC 3 cut(s) 968, 982, 1023
LweI GCATC 2 cut(s) 645, 1186
MaeII ACGT 1 cut(s) 138
MaeIII GTNAC 6 cut(s) 274, 559, 605, 644, 671, 727
MboII GAAGA 6 cut(s) 181, 328, 346, 982, 1262, 1304
MfeI CAATTG 1 cut(s) 723
MflI RGATCY 3 cut(s) 55, 196, 1087
MhlI GDGCHC 3 cut(s) 71, 880, 1146
MluCI AATT 8 cut(s) 372, 723, 1011, 1041, 1122, 1200, 1221, 1230
MluI ACGCGT 1 cut(s) 442
MlyI GAGTC 4 cut(s) 231, 424, 1062, 1289
MmeI TCCRAC 1 cut(s) 1134
MroI TCCGGA 2 cut(s) 63, 1194
MroXI GAANNNNTTC 1 cut(s) 1221
MseI TTAA 5 cut(s) 407, 495, 765, 1125, 1233
MslI CAYNNNNRTG 2 cut(s) 326, 851
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 5 cut(s) 64, 272, 676, 1195, 1299
MspR9I CCNGG 3 cut(s) 187, 401, 747
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 3 cut(s) 187, 401, 747
MvnI CGCG 2 cut(s) 444, 1079
MwoI GCNNNNNNNGC 2 cut(s) 956, 1091
NcoI CCATGG 1 cut(s) 712
NdeI CATATG 1 cut(s) 754
NlaIV GGNNCC 6 cut(s) 198, 530, 877, 1089, 1211, 1279
NmuCI GTSAC 2 cut(s) 559, 605
NsbI TGCGCA 2 cut(s) 689, 955
NspI RCATGY 2 cut(s) 954, 1085
PaeI GCATGC 2 cut(s) 954, 1085
PauI GCGCGC 1 cut(s) 1077
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 1 cut(s) 424
PflMI CCANNNNNTGG 1 cut(s) 1153
PkrI GCNGC 7 cut(s) 151, 297, 958, 997, 1038, 1068, 1076
PleI GAGTC 4 cut(s) 230, 424, 1061, 1289
PpsI GAGTC 4 cut(s) 230, 424, 1061, 1289
Psp124BI GAGCTC 2 cut(s) 71, 1146
Psp1406I AACGTT 1 cut(s) 138
Psp6I CCWGG 3 cut(s) 185, 399, 745
PspEI GGTNACC 2 cut(s) 605, 671
PspGI CCWGG 3 cut(s) 185, 399, 745
PspN4I GGNNCC 6 cut(s) 198, 530, 877, 1089, 1211, 1279
PspPI GGNCC 3 cut(s) 529, 781, 1098
PsuI RGATCY 3 cut(s) 55, 196, 1087
PteI GCGCGC 1 cut(s) 1077
RsaI GTAC 3 cut(s) 182, 698, 834
RsaNI GTAC 3 cut(s) 181, 697, 833
RseI CAYNNNNRTG 2 cut(s) 326, 851
SacI GAGCTC 2 cut(s) 71, 1146
SaqAI TTAA 5 cut(s) 407, 495, 765, 1125, 1233
SatI GCNGC 7 cut(s) 150, 296, 957, 996, 1037, 1067, 1075
Sau96I GGNCC 3 cut(s) 529, 781, 1098
SchI GAGTC 4 cut(s) 231, 424, 1062, 1289
ScrFI CCNGG 3 cut(s) 187, 401, 747
SduI GDGCHC 3 cut(s) 71, 880, 1146
SfaNI GCATC 2 cut(s) 645, 1186
SfcI CTRYAG 1 cut(s) 576
SinI GGWCC 2 cut(s) 529, 1098
SmiMI CAYNNNNRTG 2 cut(s) 326, 851
SphI GCATGC 2 cut(s) 954, 1085
Sse9I AATT 8 cut(s) 372, 723, 1011, 1041, 1122, 1200, 1221, 1230
SspI AATATT 2 cut(s) 451, 637
SstI GAGCTC 2 cut(s) 71, 1146
StyD4I CCNGG 3 cut(s) 185, 399, 745
StyI CCWWGG 2 cut(s) 712, 784
TaaI ACNGT 1 cut(s) 671
TaiI ACGT 1 cut(s) 141
TaqI TCGA 4 cut(s) 8, 309, 738, 1240
TaqII GACCGA 1 cut(s) 546
TasI AATT 8 cut(s) 372, 723, 1011, 1041, 1122, 1200, 1221, 1230
TatI WGTACW 1 cut(s) 696
TauI GCSGC 4 cut(s) 152, 298, 1069, 1077
TfiI GAWTC 1 cut(s) 424
Tru1I TTAA 5 cut(s) 407, 495, 765, 1125, 1233
Tru9I TTAA 5 cut(s) 407, 495, 765, 1125, 1233
TscAI CASTG 4 cut(s) 30, 370, 387, 568
TseFI GTSAC 2 cut(s) 559, 605
TseI GCWGC 3 cut(s) 956, 995, 1036
Tsp45I GTSAC 2 cut(s) 559, 605
TspDTI ATGAA 5 cut(s) 512, 589, 724, 1202, 1278
TspGWI ACGGA 1 cut(s) 84
TspRI CASTG 4 cut(s) 30, 370, 387, 568
Van91I CCANNNNNTGG 1 cut(s) 1153
VpaK11BI GGWCC 2 cut(s) 529, 1098
XapI RAATTY 1 cut(s) 1221
XceI RCATGY 2 cut(s) 954, 1085
XmnI GAANNNNTTC 1 cut(s) 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.