AT2G39190

Phosphotransferase enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0005758
Physical Location & Seq
Forward (+)
16349968 .. 16356097
6130 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G39190.1

Sequence Viewer

Length: 1125 bp
ATGGCGTCCGTATCTCCATCTCCGTCGTGTTCCACTATACCCATACCACTTCGACGAACATCTTTCGCCGTTGCTGAGTTGAGACGATTAAAACAAAGAAGAGCGATCCCACCTGTGTCCGTCGGTCTCGGACACTTCGCTGATGTTGTACGCAATGACGTTGATTTCCTGAAGAACAAAATCGGTATCGGACTCCGTTGGGCTAACGAGGCTTTTCGTGTACCGGAAGTGACTAAATCCGCTGAGGAACTGTTTTGGCTTAGGCATCTTGAGGATCATACTTCTCAGAATTTGAAGTCACAATCTTGGCCTCAGCCTTCCTACTCAGGGCTCACTGGGGTGGATTTGTTCATGGCTGATGTCAAAGCCTTGGAGACATATGCTGGTTACTTTTACAGTCTTTCTAAGATGTGGTCAAGACCACTTCCTGAAGTTTATGATTCACAAGCTGTTGCAGATTACTTTAATTGCAGGCCTCATGTCGTTGCCTTTAGGCTTCTCGAGGTATTTTCTGCGTTCACGATTGCTGCCATCAGATTACGAACATCAGCATCAGTTAAGGGCAAAAGTTTAGAAGCTTCAGAGCAGATTTTTGGGATGGTGTTGAAAGAAACCATGCTACATTTGGGCCCAACTTTTATCAAAGTTGGTCAATCGCTTTCCACGAGGCCAGATATCATTGGGACTGAAATCTCCAAGGCACTATCTGAACTGCATGACCGAATCCCTCCCTTTCCCTGGCCTGAGGCTGTAAAAATCCTTGAAGGGGAATTAGGTGGTCCTGTCGAATCATTCTTTAGTCAGTTTTCGCAAGAAACTGTAGCAGCAGCATCCTTTGGTCAGGTCTACCGAGGAAGGACCCTCGATGGTGCAGATGTTGCAGTGAAAGTTCAGCGCCCTGATCTGAGACATGCAGTGCTACGCGACATCTACATTCTGCGACTTGGGTTAGGTGTATTGCGAAAGGTAGCAAAGAGAGAAAATGACATTCGTGTATATGCTGATGAGCTTGGAATGGGTTTGGCTGGAGAATTGGACTTTACTTTAGAGGCTGCCAATGCCTCTGAATTTCAGCTCACGCACGATTTTCCTATATCCGGGTTCCAAAAGTATATCAGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1 APH DCP2 NUDIX

Protein Analysis

374

Amino Acids

41.68

Weight (kDa)

7.78

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 238 - 358 1.7e-36 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 846
AccII CGCG 1 cut(s) 924
AciI CCGC 1 cut(s) 240
AclWI GGATC 2 cut(s) 100, 282
AcsI RAATTY 2 cut(s) 289, 1067
AcuI CTGAAG 3 cut(s) 191, 450, 564
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 150, 222
AfiI CCNNNNNNNGG 4 cut(s) 327, 738, 766, 1097
AgsI TTSAA 3 cut(s) 295, 607, 764
AjnI CCWGG 1 cut(s) 737
AleI CACNNNNGTG 1 cut(s) 338
AluBI AGCT 4 cut(s) 449, 578, 1009, 1075
AluI AGCT 4 cut(s) 449, 578, 1009, 1075
Alw26I GTCTC 4 cut(s) 76, 131, 368, 901
AlwI GGATC 2 cut(s) 100, 282
Ama87I CYCGRG 1 cut(s) 500
AoxI GGCC 5 cut(s) 308, 473, 628, 668, 740
ApaI GGGCCC 1 cut(s) 632
ApeKI GCWGC 4 cut(s) 527, 824, 827, 1052
ApoI RAATTY 2 cut(s) 289, 1067
AspLEI GCGC 1 cut(s) 897
AspS9I GGNCC 4 cut(s) 628, 629, 779, 858
AsuC2I CCSGG 1 cut(s) 1099
AvaI CYCGRG 1 cut(s) 500
AvaII GGWCC 2 cut(s) 779, 858
AxyI CCTNAGG 1 cut(s) 744
BaeGI GKGCMC 1 cut(s) 632
BanII GRGCYC 2 cut(s) 333, 632
BauI CACGAG 1 cut(s) 664
BbvCI CCTCAGC 2 cut(s) 243, 312
BbvI GCAGC 4 cut(s) 514, 836, 839, 1039
BccI CCATC 4 cut(s) 25, 539, 592, 860
BceAI ACGGC 1 cut(s) 53
BciT130I CCWGG 1 cut(s) 739
BcnI CCSGG 1 cut(s) 1099
BcoDI GTCTC 4 cut(s) 76, 131, 368, 901
BfmI CTRYAG 1 cut(s) 819
BfoI RGCGCY 1 cut(s) 898
BisI GCNGC 4 cut(s) 528, 825, 828, 1053
BlsI GCNGC 4 cut(s) 529, 826, 829, 1054
Bme1390I CCNGG 2 cut(s) 739, 1099
Bme18I GGWCC 2 cut(s) 779, 858
BmeT110I CYCGRG 1 cut(s) 500
BmgT120I GGNCC 4 cut(s) 628, 629, 779, 858
BmiI GGNNCC 3 cut(s) 630, 860, 1103
BmrFI CCNGG 2 cut(s) 739, 1099
BmrI ACTGGG 1 cut(s) 345
BmsI GCATC 3 cut(s) 274, 560, 839
BmuI ACTGGG 1 cut(s) 345
BpmI CTGGAG 1 cut(s) 1047
Bpu10I CCTNAGC 3 cut(s) 243, 260, 312
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 1 cut(s) 1099
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 4 cut(s) 369, 696, 737, 850
BsaWI WCCGGW 1 cut(s) 223
Bsc4I CCNNNNNNNGG 4 cut(s) 327, 738, 766, 1097
Bse1I ACTGG 1 cut(s) 340
Bse21I CCTNAGG 1 cut(s) 744
Bse3DI GCAATG 1 cut(s) 160
BseBI CCWGG 1 cut(s) 739
BseDI CCNNGG 4 cut(s) 369, 696, 737, 850
BseGI GGATG 2 cut(s) 603, 830
BseLI CCNNNNNNNGG 4 cut(s) 327, 738, 766, 1097
BseMI GCAATG 1 cut(s) 160
BseMII CTCAG 7 cut(s) 66, 234, 299, 326, 339, 735, 896
BseNI ACTGG 1 cut(s) 340
BseSI GKGCMC 1 cut(s) 632
BseXI GCAGC 4 cut(s) 514, 836, 839, 1039
BsgI GTGCAG 1 cut(s) 891
Bsh1236I CGCG 1 cut(s) 924
BshFI GGCC 5 cut(s) 310, 475, 630, 670, 742
BsiHKCI CYCGRG 1 cut(s) 500
BsiSI CCGG 2 cut(s) 224, 1098
BslFI GGGAC 1 cut(s) 697
BslI CCNNNNNNNGG 4 cut(s) 327, 738, 766, 1097
BsmAI GTCTC 4 cut(s) 76, 131, 368, 901
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 1 cut(s) 697
BsnI GGCC 5 cut(s) 310, 475, 630, 670, 742
Bso31I GGTCTC 1 cut(s) 131
BsoBI CYCGRG 1 cut(s) 500
Bsp120I GGGCCC 1 cut(s) 628
Bsp1286I GDGCHC 2 cut(s) 333, 632
Bsp143I GATC 3 cut(s) 105, 274, 901
BspACI CCGC 1 cut(s) 240
BspANI GGCC 5 cut(s) 310, 475, 630, 670, 742
BspCNI CTCAG 7 cut(s) 67, 235, 298, 325, 338, 736, 897
BspFNI CGCG 1 cut(s) 924
BspLI GGNNCC 3 cut(s) 630, 860, 1103
BspPI GGATC 2 cut(s) 100, 282
BspQI GCTCTTC 1 cut(s) 94
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 160
BsrI ACTGG 1 cut(s) 340
BssECI CCNNGG 4 cut(s) 369, 696, 737, 850
BssMI GATC 3 cut(s) 105, 274, 901
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 664
BssT1I CCWWGG 2 cut(s) 369, 696
Bst2BI CACGAG 1 cut(s) 664
Bst2UI CCWGG 1 cut(s) 739
Bst4CI ACNGT 3 cut(s) 252, 398, 820
Bst6I CTCTTC 1 cut(s) 94
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 878
BstC8I GCNNGC 1 cut(s) 473
BstDEI CTNAG 9 cut(s) 75, 243, 260, 285, 312, 325, 405, 744, 905
BstF5I GGATG 2 cut(s) 603, 830
BstFNI CGCG 1 cut(s) 924
BstH2I RGCGCY 1 cut(s) 898
BstHHI GCGC 1 cut(s) 897
BstKTI GATC 3 cut(s) 108, 277, 904
BstMAI GTCTC 4 cut(s) 76, 131, 368, 901
BstMBI GATC 3 cut(s) 105, 274, 901
BstMWI GCNNNNNNNGC 3 cut(s) 209, 878, 1058
BstNI CCWGG 1 cut(s) 739
BstNSI RCATGY 1 cut(s) 914
BstSCI CCNGG 2 cut(s) 737, 1097
BstSFI CTRYAG 1 cut(s) 819
BstSLI GKGCMC 1 cut(s) 632
BstUI CGCG 1 cut(s) 924
BstV1I GCAGC 4 cut(s) 514, 836, 839, 1039
Bsu36I CCTNAGG 1 cut(s) 744
BsuRI GGCC 5 cut(s) 310, 475, 630, 670, 742
BtsCI GGATG 2 cut(s) 603, 830
BtsI GCAGTG 2 cut(s) 888, 921
BtsIMutI CAGTG 3 cut(s) 333, 888, 921
Cac8I GCNNGC 1 cut(s) 473
CfoI GCGC 1 cut(s) 897
Cfr13I GGNCC 4 cut(s) 628, 629, 779, 858
Csp6I GTAC 2 cut(s) 149, 221
CviAII CATG 5 cut(s) 352, 479, 616, 716, 911
CviQI GTAC 2 cut(s) 149, 221
DdeI CTNAG 9 cut(s) 75, 243, 260, 285, 312, 325, 405, 744, 905
DpnI GATC 3 cut(s) 107, 276, 903
DpnII GATC 3 cut(s) 105, 274, 901
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco130I CCWWGG 2 cut(s) 369, 696
Eco147I AGGCCT 1 cut(s) 475
Eco24I GRGCYC 2 cut(s) 333, 632
Eco31I GGTCTC 1 cut(s) 131
Eco32I GATATC 1 cut(s) 676
Eco47I GGWCC 2 cut(s) 779, 858
Eco57I CTGAAG 3 cut(s) 191, 450, 564
Eco81I CCTNAGG 1 cut(s) 744
Eco88I CYCGRG 1 cut(s) 500
EcoO109I RGGNCCY 1 cut(s) 858
EcoRII CCWGG 1 cut(s) 737
EcoRV GATATC 1 cut(s) 676
EcoT14I CCWWGG 2 cut(s) 369, 696
EcoT38I GRGCYC 2 cut(s) 333, 632
ErhI CCWWGG 2 cut(s) 369, 696
Esp3I CGTCTC 1 cut(s) 76
FaeI CATG 5 cut(s) 355, 482, 619, 719, 914
FaqI GGGAC 1 cut(s) 697
FatI CATG 5 cut(s) 351, 478, 615, 715, 910
FauNDI CATATG 1 cut(s) 379
FblI GTMKAC 1 cut(s) 846
Fnu4HI GCNGC 4 cut(s) 528, 825, 828, 1053
FokI GGATG 2 cut(s) 610, 817
FriOI GRGCYC 2 cut(s) 333, 632
Fsp4HI GCNGC 4 cut(s) 528, 825, 828, 1053
GlaI GCGC 1 cut(s) 896
GluI GCNGC 4 cut(s) 528, 825, 828, 1053
GsuI CTGGAG 1 cut(s) 1047
HaeII RGCGCY 1 cut(s) 898
HaeIII GGCC 5 cut(s) 310, 475, 630, 670, 742
HapII CCGG 2 cut(s) 224, 1098
HhaI GCGC 1 cut(s) 897
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 5 cut(s) 355, 482, 619, 719, 914
Hin6I GCGC 1 cut(s) 895
HinP1I GCGC 1 cut(s) 895
HindIII AAGCTT 1 cut(s) 576
HinfI GANTC 4 cut(s) 192, 440, 723, 788
HpaII CCGG 2 cut(s) 224, 1098
Hpy166II GTNNAC 3 cut(s) 221, 519, 847
Hpy188I TCNGA 8 cut(s) 131, 191, 288, 536, 583, 709, 906, 1066
Hpy188III TCNNGA 6 cut(s) 169, 269, 417, 428, 500, 520
Hpy8I GTNNAC 3 cut(s) 221, 519, 847
Hpy99I CGWCG 3 cut(s) 28, 57, 125
HpyAV CCTTC 3 cut(s) 327, 758, 849
HpyCH4III ACNGT 3 cut(s) 252, 398, 820
HpyCH4IV ACGT 1 cut(s) 159
HpyCH4V TGCA 6 cut(s) 455, 471, 715, 872, 881, 914
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 878, 1058
HpyF3I CTNAG 9 cut(s) 75, 243, 260, 285, 312, 325, 405, 744, 905
HpySE526I ACGT 1 cut(s) 159
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 5 cut(s) 355, 482, 619, 719, 914
HspAI GCGC 1 cut(s) 895
Kzo9I GATC 3 cut(s) 105, 274, 901
LguI GCTCTTC 1 cut(s) 94
Lsp1109I GCAGC 4 cut(s) 514, 836, 839, 1039
LweI GCATC 3 cut(s) 274, 560, 839
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 3 cut(s) 229, 297, 386
MalI GATC 3 cut(s) 107, 276, 903
MboI GATC 3 cut(s) 105, 274, 901
MboII GAAGA 2 cut(s) 111, 184
MhlI GDGCHC 2 cut(s) 333, 632
MluCI AATT 5 cut(s) 289, 466, 770, 1031, 1067
MlyI GAGTC 1 cut(s) 186
MseI TTAA 3 cut(s) 89, 465, 558
MslI CAYNNNNRTG 1 cut(s) 338
MspA1I CMGCKG 1 cut(s) 242
MspI CCGG 2 cut(s) 224, 1098
MspR9I CCNGG 2 cut(s) 739, 1099
MvaI CCWGG 1 cut(s) 739
MvnI CGCG 1 cut(s) 924
MwoI GCNNNNNNNGC 3 cut(s) 209, 878, 1058
NciI CCSGG 1 cut(s) 1099
NdeI CATATG 1 cut(s) 379
NdeII GATC 3 cut(s) 105, 274, 901
NlaIII CATG 5 cut(s) 355, 482, 619, 719, 914
NlaIV GGNNCC 3 cut(s) 630, 860, 1103
NmuCI GTSAC 2 cut(s) 229, 297
NspI RCATGY 1 cut(s) 914
OliI CACNNNNGTG 1 cut(s) 338
PaeR7I CTCGAG 1 cut(s) 500
PceI AGGCCT 1 cut(s) 475
PciSI GCTCTTC 1 cut(s) 94
PcsI WCGNNNNNNNCGW 1 cut(s) 662
PfeI GAWTC 3 cut(s) 440, 723, 788
PkrI GCNGC 4 cut(s) 529, 826, 829, 1054
PleI GAGTC 1 cut(s) 186
PpsI GAGTC 1 cut(s) 186
PpuMI RGGWCCY 1 cut(s) 858
Psp5II RGGWCCY 1 cut(s) 858
Psp6I CCWGG 1 cut(s) 737
PspGI CCWGG 1 cut(s) 737
PspN4I GGNNCC 3 cut(s) 630, 860, 1103
PspOMI GGGCCC 1 cut(s) 628
PspPI GGNCC 4 cut(s) 628, 629, 779, 858
PspPPI RGGWCCY 1 cut(s) 858
RsaI GTAC 2 cut(s) 150, 222
RsaNI GTAC 2 cut(s) 149, 221
RseI CAYNNNNRTG 1 cut(s) 338
SapI GCTCTTC 1 cut(s) 94
SaqAI TTAA 3 cut(s) 89, 465, 558
SatI GCNGC 4 cut(s) 528, 825, 828, 1053
Sau3AI GATC 3 cut(s) 105, 274, 901
Sau96I GGNCC 4 cut(s) 628, 629, 779, 858
SchI GAGTC 1 cut(s) 186
ScrFI CCNGG 2 cut(s) 739, 1099
SduI GDGCHC 2 cut(s) 333, 632
SfaNI GCATC 3 cut(s) 274, 560, 839
SfcI CTRYAG 1 cut(s) 819
Sfr274I CTCGAG 1 cut(s) 500
SinI GGWCC 2 cut(s) 779, 858
SlaI CTCGAG 1 cut(s) 500
SmiMI CAYNNNNRTG 1 cut(s) 338
SmlI CTYRAG 2 cut(s) 269, 500
SmoI CTYRAG 2 cut(s) 269, 500
Sse9I AATT 5 cut(s) 289, 466, 770, 1031, 1067
SseBI AGGCCT 1 cut(s) 475
SsiI CCGC 1 cut(s) 240
StuI AGGCCT 1 cut(s) 475
StyD4I CCNGG 2 cut(s) 737, 1097
StyI CCWWGG 2 cut(s) 369, 696
TaaI ACNGT 3 cut(s) 252, 398, 820
TaiI ACGT 1 cut(s) 162
TaqI TCGA 4 cut(s) 52, 501, 786, 864
TaqII GACCGA 2 cut(s) 113, 735
TasI AATT 5 cut(s) 289, 466, 770, 1031, 1067
TfiI GAWTC 3 cut(s) 440, 723, 788
Tru1I TTAA 3 cut(s) 89, 465, 558
Tru9I TTAA 3 cut(s) 89, 465, 558
TscAI CASTG 3 cut(s) 340, 888, 921
TseFI GTSAC 2 cut(s) 229, 297
TseI GCWGC 4 cut(s) 527, 824, 827, 1052
Tsp45I GTSAC 2 cut(s) 229, 297
TspDTI ATGAA 1 cut(s) 340
TspGWI ACGGA 3 cut(s) 12, 109, 185
TspRI CASTG 3 cut(s) 340, 888, 921
VpaK11BI GGWCC 2 cut(s) 779, 858
XapI RAATTY 2 cut(s) 289, 1067
XceI RCATGY 1 cut(s) 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.