Rw1G028150

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0005758
Physical Location & Seq
Forward (+)
55694488 .. 55702633
8146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G028150.1

Sequence Viewer

Length: 2256 bp
ATGGCGACGGCGGCTGCGGCTGCGGCGCTGGTTCTCAAGCCGTCGTGCGTGATGCGACGGCCGAGGGGAGCCAAAGCGACGACGTACAAGAGTAAGCGAGCAATAAAGGGACGAGCTTTGTGGGATTTCGGGCACTTCGGTCAGGTGGTCAGCAAGGATGTGGAGTTTTTGAAGCGGAGGATTGGTGGAGGATTTGAGTGGGCGAATAAGACTCTTCGGATTCCGGAGGTGTTCAAGGCCATCGACGACGTCGTTTGGCTTCGTAACCTCGAAGAACCCTATGCCCCTCCCTTGCCGGAGGCGCGTTGGCCTCAACCTTCCTATCCAGAATTCACTGGTGTCGATCTATTCATGGCCGATCTCAAAGCGTTAGAGGCATATGCTCTTTACTTTTATTATCTTTCTAAGAGTTGGTCCAAGCCGCTTCCTGAAGTCTATGATCCAGAAAGTGTTGCTGATTATTTCAGTTGCAGGCCTCACGTAGTCACCCTTAGACTTCTTGAGGTAGTTTCCTCCTTTGCTTTTGCTGCAATCAGAATTCGGATATCTGGGATCAAAAAGTATTTACGACCAAGTTCGGGTGATGATTATGAAAGCTTATCACAATACAATATTGGAATGGTGTTAAAAGAAACTATGCTAAATCTGGGTCCCACTTTTATCAAAGTTGGCCAGTCCCTTTCCACCAGACCAGACATTATTGGTGCTGAAATTTCCCAGCCATTGTCTGAGCTGCATGATCAAATCCCTCCTTTTTCCAGGGATGTGGCGATGAAAATTATCGAAGAAGAATTAGGATCTCCTGCTGAGTCACTGTATAGCTACATTTCTGAGAAACCTGAGGCAGCGGCATCTTTTGGTCAGGTCTACCGTGCACGTACTCATGATGGACTGGATGTTGCTGTTAAAGTTCAACGTCCTAACTTGCGTCATATTGTAGTGCGCGATATATACATTCTTCGCCTGGGGCTTGGACTATTGCAAAAGATAGCAAAGAGAAAAGGTGATCTCCGCCTATATGCCGATGAGCTTGGGAAAGGTTTTGTTGGAGAACTGGATTATACTTTAGAAGCTGCAAATGCTTCCAAGTTTCTGGAAGTTCATTCCTCCTATCCCTTCATGCTTGTGCCAAAAGTATTCCAAAGTTTAAGTGGAAAGAGAGTTCTGACAATGGAGTGGATTGTTGGTGAGAGTCCAACCGACTTATTGTCTGTATCTTCTGGAAGCTCTACAGATGATAGCTCTACATATACAGAGAGGCAAAGATTAGATTCCAAAAGGCGTCTCCTTGATCTGGTCAGGAAAGGGGTGGAGGCAGTACTAGTTCAGCTCCTTGAAACAGGATTATTGCATGCTGATCCACATCCTGGGAACCTACGTTACACATCTTCAGGACAAATAGGGTTTTTGGATTTTGGCCTGCTTTGTCAGATGGAAAAGAGGCATCAATATGCTATGCTTGCATCTATTGTCCACATTGTAAATGGAGATTGGGCATCCCTTGTCCAATGTTTGACTGAAATGGATGTTGTAAGACCAGGGACTAATATCAGACGTGTAACAATGGATCTGGAATATGACTTGGGGGAGGTAGAATTCAGAGATGGAGTTCCTGATGTGAAGTTCAGCAGGGTTTTGGGTAAGATCTGGTCCCTAGCCTTCAAGTATCATTTTCGCATGCCACCCTACTACTCGCTTGTTCTACGTTCTCTTGCTTCCTTTGAAGGATTAGCCGTCGCTGGAGATAGAAATTTTAAGACATTTGAAGCTGCATACCCTTATGTCGTTCGGAAACTACTTACTGAAAACTCAGCTGCCACAAGGAAAATTTTGCATTCGGTAGTTTTTAACAAAAAGAGGGAGTTCCAGTGGCAAAAGCTTGGTCTTTTCTTAAAAGTAGGCGCAACTAGGAAAGGTTTGAATGGGAGTATAGCATCAAAACTCGACACTTCTCATGATTATTTACCTACAAGAGACAATGGTGAAATTGATGCTGCAAACTTGGTTCTGAAGCTTTTACCATCTAAAGATGGTGTTGTGCTGAGAAGACTCTTGATGACTGCAGTAAGTTATACTAAACCTGTATTTTATCATGTAATCAAGAAACAATCTCTGCCAACCTCAAATGGGAAATGCAGATCTACCCCTACTTCCTTCTTCCAGTCGATCCACCCATGTCCCACATACTTCACCTTCTTTCTTGCCACTTTAATCTCTATCGCATTCCACATGCCTCTCATGCACATTATCTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1 APH DCP2 NUDIX

Protein Analysis

751

Amino Acids

84.58

Weight (kDa)

9.29

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 245 - 503 8.7e-68 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 1367
AccI GTMKAC 1 cut(s) 867
AccII CGCG 2 cut(s) 304, 945
AccIII TCCGGA 1 cut(s) 223
AciI CCGC 7 cut(s) 11, 17, 23, 175, 422, 848, 1012
AclWI GGATC 6 cut(s) 434, 560, 805, 1352, 1575, 2161
AcoI YGGCCR 3 cut(s) 59, 354, 670
AcsI RAATTY 6 cut(s) 329, 537, 711, 1595, 1750, 1827
AcuI CTGAAG 3 cut(s) 450, 1374, 2030
AcyI GRCGYC 2 cut(s) 249, 1282
AfaI GTAC 3 cut(s) 86, 880, 1320
AfiI CCNNNNNNNGG 4 cut(s) 578, 1294, 1367, 2127
AflIII ACRYGT 1 cut(s) 1555
AgsI TTSAA 8 cut(s) 172, 235, 914, 1337, 1663, 1724, 1766, 1921
AhdI GACNNNNNGTC 1 cut(s) 1207
AhlI ACTAGT 1 cut(s) 1321
AjiI CACGTC 1 cut(s) 1556
AjnI CCWGG 4 cut(s) 758, 963, 1366, 1537
AloI GAACNNNNNNTCC 2 cut(s) 1146, 1178
Alw21I GWGCWC 1 cut(s) 877
Alw26I GTCTC 2 cut(s) 1289, 1968
Alw44I GTGCAC 1 cut(s) 873
AlwI GGATC 6 cut(s) 434, 560, 805, 1352, 1575, 2161
Aor13HI TCCGGA 1 cut(s) 223
AoxI GGCC 7 cut(s) 59, 237, 308, 354, 473, 670, 1417
ApaLI GTGCAC 1 cut(s) 873
ApeKI GCWGC 9 cut(s) 14, 20, 527, 733, 845, 1073, 1769, 1814, 1994
ApoI RAATTY 6 cut(s) 329, 537, 711, 1595, 1750, 1827
ArsI GACNNNNNNTTYG 2 cut(s) 1867, 1899
AspLEI GCGC 4 cut(s) 28, 304, 945, 1904
AspS9I GGNCC 3 cut(s) 414, 650, 1650
AsuHPI GGTGA 6 cut(s) 478, 593, 1016, 1199, 1994, 2182
AvaII GGWCC 3 cut(s) 414, 650, 1650
AxyI CCTNAGG 1 cut(s) 840
BaeGI GKGCMC 2 cut(s) 135, 877
BalI TGGCCA 1 cut(s) 672
BbsI GAAGAC 1 cut(s) 2053
Bbv12I GWGCWC 1 cut(s) 877
BbvI GCAGC 8 cut(s) 7, 514, 720, 857, 1060, 1756, 1801, 1981
BccI CCATC 6 cut(s) 248, 881, 1426, 1598, 2024, 2029
BceAI ACGGC 4 cut(s) 24, 25, 74, 1718
BciT130I CCWGG 4 cut(s) 760, 965, 1368, 1539
BclI TGATCA 1 cut(s) 739
BcoDI GTCTC 2 cut(s) 1289, 1968
BcuI ACTAGT 1 cut(s) 1321
BfaI CTAG 3 cut(s) 1322, 1655, 1908
BfmI CTRYAG 2 cut(s) 1230, 2061
BfoI RGCGCY 1 cut(s) 29
BglII AGATCT 2 cut(s) 1644, 2138
BmcAI AGTACT 1 cut(s) 1320
Bme1390I CCNGG 4 cut(s) 760, 965, 1368, 1539
Bme18I GGWCC 3 cut(s) 414, 650, 1650
BmeRI GACNNNNNGTC 1 cut(s) 1207
BmgBI CACGTC 1 cut(s) 1556
BmgT120I GGNCC 3 cut(s) 414, 650, 1650
BmiI GGNNCC 5 cut(s) 70, 651, 652, 1373, 1652
BmrFI CCNGG 4 cut(s) 760, 965, 1368, 1539
BmsI GCATC 7 cut(s) 42, 860, 1453, 1472, 1505, 1943, 1981
BpiI GAAGAC 1 cut(s) 2053
BpmI CTGGAG 1 cut(s) 1761
BpuEI CTTGAG 2 cut(s) 20, 521
BsaAI YACGTR 2 cut(s) 481, 878
BsaBI GATNNNNATC 1 cut(s) 1362
BsaHI GRCGYC 2 cut(s) 249, 1282
BsaJI CCNNGG 5 cut(s) 62, 759, 964, 1367, 1538
BsaWI WCCGGW 1 cut(s) 223
BsaXI ACNNNNNCTCC 4 cut(s) 169, 199, 1853, 1883
Bsc4I CCNNNNNNNGG 4 cut(s) 578, 1294, 1367, 2127
Bse1I ACTGG 6 cut(s) 340, 673, 897, 1059, 1867, 2161
Bse21I CCTNAGG 1 cut(s) 840
Bse8I GATNNNNATC 1 cut(s) 1362
BseAI TCCGGA 1 cut(s) 223
BseBI CCWGG 4 cut(s) 760, 965, 1368, 1539
BseDI CCNNGG 5 cut(s) 62, 759, 964, 1367, 1538
BseGI GGATG 6 cut(s) 163, 769, 901, 1363, 1496, 1531
BseJI GATNNNNATC 1 cut(s) 1362
BseLI CCNNNNNNNGG 4 cut(s) 578, 1294, 1367, 2127
BseMII CTCAG 6 cut(s) 720, 798, 822, 831, 1824, 2033
BseNI ACTGG 6 cut(s) 340, 673, 897, 1059, 1867, 2161
BseSI GKGCMC 2 cut(s) 135, 877
BseX3I CGGCCG 1 cut(s) 59
BseXI GCAGC 8 cut(s) 7, 514, 720, 857, 1060, 1756, 1801, 1981
BseYI CCCAGC 1 cut(s) 717
Bsh1236I CGCG 2 cut(s) 304, 945
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 7 cut(s) 61, 239, 310, 356, 475, 672, 1419
BsiEI CGRYCG 1 cut(s) 62
BsiHKAI GWGCWC 1 cut(s) 877
BsiSI CCGG 2 cut(s) 224, 296
BslFI GGGAC 6 cut(s) 123, 636, 661, 1555, 1636, 2163
BslI CCNNNNNNNGG 4 cut(s) 578, 1294, 1367, 2127
BsmAI GTCTC 2 cut(s) 1289, 1968
BsmBI CGTCTC 1 cut(s) 1289
BsmFI GGGAC 6 cut(s) 123, 636, 661, 1555, 1636, 2163
BsmI GAATGC 2 cut(s) 1834, 2222
BsnI GGCC 7 cut(s) 61, 239, 310, 356, 475, 672, 1419
Bsp1286I GDGCHC 2 cut(s) 135, 877
Bsp13I TCCGGA 1 cut(s) 223
BspACI CCGC 7 cut(s) 11, 17, 23, 175, 422, 848, 1012
BspANI GGCC 7 cut(s) 61, 239, 310, 356, 475, 672, 1419
BspCNI CTCAG 6 cut(s) 721, 799, 823, 832, 1823, 2034
BspEI TCCGGA 1 cut(s) 223
BspFNI CGCG 2 cut(s) 304, 945
BspHI TCATGA 2 cut(s) 883, 1954
BspLI GGNNCC 5 cut(s) 70, 651, 652, 1373, 1652
BspMAI CTGCAG 1 cut(s) 2065
BspPI GGATC 6 cut(s) 434, 560, 805, 1352, 1575, 2161
BsrI ACTGG 6 cut(s) 340, 673, 897, 1059, 1867, 2161
BssECI CCNNGG 5 cut(s) 62, 759, 964, 1367, 1538
BssNI GRCGYC 2 cut(s) 249, 1282
Bst2UI CCWGG 4 cut(s) 760, 965, 1368, 1539
Bst4CI ACNGT 2 cut(s) 816, 872
Bst6I CTCTTC 1 cut(s) 219
BstACI GRCGYC 2 cut(s) 249, 1282
BstBAI YACGTR 2 cut(s) 481, 878
BstC8I GCNNGC 6 cut(s) 99, 473, 1353, 1421, 1461, 1679
BstDEI CTNAG 8 cut(s) 405, 491, 729, 807, 831, 840, 1810, 2042
BstF5I GGATG 6 cut(s) 163, 769, 901, 1363, 1496, 1531
BstFNI CGCG 2 cut(s) 304, 945
BstH2I RGCGCY 1 cut(s) 29
BstHHI GCGC 4 cut(s) 28, 304, 945, 1904
BstMAI GTCTC 2 cut(s) 1289, 1968
BstMCI CGRYCG 1 cut(s) 62
BstNI CCWGG 4 cut(s) 760, 965, 1368, 1539
BstNSI RCATGY 3 cut(s) 1355, 1681, 2233
BstSCI CCNGG 4 cut(s) 758, 963, 1366, 1537
BstSFI CTRYAG 2 cut(s) 1230, 2061
BstSLI GKGCMC 2 cut(s) 135, 877
BstUI CGCG 2 cut(s) 304, 945
BstV1I GCAGC 8 cut(s) 7, 514, 720, 857, 1060, 1756, 1801, 1981
BstV2I GAAGAC 1 cut(s) 2053
BstX2I RGATCY 4 cut(s) 797, 1567, 1644, 2138
BstXI CCANNNNNNTGG 2 cut(s) 766, 1093
BstYI RGATCY 4 cut(s) 797, 1567, 1644, 2138
BstZI CGGCCG 1 cut(s) 59
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 7 cut(s) 61, 239, 310, 356, 475, 672, 1419
BtgZI GCGATG 1 cut(s) 785
BtrI CACGTC 1 cut(s) 1556
BtsCI GGATG 6 cut(s) 163, 769, 901, 1363, 1496, 1531
BtsIMutI CAGTG 3 cut(s) 333, 812, 1874
Cac8I GCNNGC 6 cut(s) 99, 473, 1353, 1421, 1461, 1679
CciI TCATGA 2 cut(s) 883, 1954
CfoI GCGC 4 cut(s) 28, 304, 945, 1904
Cfr13I GGNCC 3 cut(s) 414, 650, 1650
CseI GACGC 2 cut(s) 917, 1271
Csp6I GTAC 3 cut(s) 85, 879, 1319
CviQI GTAC 3 cut(s) 85, 879, 1319
DdeI CTNAG 8 cut(s) 405, 491, 729, 807, 831, 840, 1810, 2042
DriI GACNNNNNGTC 1 cut(s) 1207
EaeI YGGCCR 3 cut(s) 59, 354, 670
EagI CGGCCG 1 cut(s) 59
Eam1104I CTCTTC 1 cut(s) 219
Eam1105I GACNNNNNGTC 1 cut(s) 1207
EarI CTCTTC 1 cut(s) 219
EciI GGCGGA 1 cut(s) 1001
EclXI CGGCCG 1 cut(s) 59
Eco147I AGGCCT 1 cut(s) 475
Eco32I GATATC 1 cut(s) 546
Eco47I GGWCC 3 cut(s) 414, 650, 1650
Eco52I CGGCCG 1 cut(s) 59
Eco57I CTGAAG 3 cut(s) 450, 1374, 2030
Eco81I CCTNAGG 1 cut(s) 840
EcoO109I RGGNCCY 1 cut(s) 650
EcoRI GAATTC 3 cut(s) 329, 537, 1595
EcoRII CCWGG 4 cut(s) 758, 963, 1366, 1537
EcoRV GATATC 1 cut(s) 546
Esp3I CGTCTC 1 cut(s) 1289
FaqI GGGAC 6 cut(s) 123, 636, 661, 1555, 1636, 2163
FauNDI CATATG 1 cut(s) 379
FbaI TGATCA 1 cut(s) 739
FblI GTMKAC 1 cut(s) 867
FokI GGATG 6 cut(s) 170, 776, 908, 1350, 1483, 1538
FspBI CTAG 3 cut(s) 1322, 1655, 1908
GlaI GCGC 4 cut(s) 27, 303, 944, 1903
GsaI CCCAGC 1 cut(s) 721
GsuI CTGGAG 1 cut(s) 1761
HaeII RGCGCY 1 cut(s) 29
HaeIII GGCC 7 cut(s) 61, 239, 310, 356, 475, 672, 1419
HapII CCGG 2 cut(s) 224, 296
HgaI GACGC 2 cut(s) 917, 1271
HhaI GCGC 4 cut(s) 28, 304, 945, 1904
Hin1I GRCGYC 2 cut(s) 249, 1282
Hin6I GCGC 4 cut(s) 26, 302, 943, 1902
HinP1I GCGC 4 cut(s) 26, 302, 943, 1902
HindIII AAGCTT 3 cut(s) 595, 1877, 2012
HinfI GANTC 6 cut(s) 211, 220, 809, 1192, 1271, 2049
HpaII CCGG 2 cut(s) 224, 296
HphI GGTGA 6 cut(s) 478, 593, 1016, 1199, 1994, 2182
Hpy166II GTNNAC 3 cut(s) 868, 875, 1474
Hpy8I GTNNAC 3 cut(s) 868, 875, 1474
Hpy99I CGWCG 9 cut(s) 10, 46, 60, 82, 85, 248, 251, 254, 1739
HpyAV CCTTC 6 cut(s) 327, 1126, 1669, 1718, 2164, 2203
HpyCH4III ACNGT 2 cut(s) 816, 872
HpyCH4IV ACGT 8 cut(s) 83, 249, 480, 877, 916, 1378, 1555, 1705
HpyF3I CTNAG 8 cut(s) 405, 491, 729, 807, 831, 840, 1810, 2042
HpySE526I ACGT 8 cut(s) 83, 249, 480, 877, 916, 1378, 1555, 1705
Hsp92I GRCGYC 2 cut(s) 249, 1282
HspAI GCGC 4 cut(s) 26, 302, 943, 1902
KflI GGGWCCC 1 cut(s) 650
Kpn2I TCCGGA 1 cut(s) 223
Ksp22I TGATCA 1 cut(s) 739
LmnI GCTCC 2 cut(s) 68, 1335
Lsp1109I GCAGC 8 cut(s) 7, 514, 720, 857, 1060, 1756, 1801, 1981
LweI GCATC 7 cut(s) 42, 860, 1453, 1472, 1505, 1943, 1981
MaeI CTAG 3 cut(s) 1322, 1655, 1908
MaeII ACGT 8 cut(s) 83, 249, 480, 877, 916, 1378, 1555, 1705
MaeIII GTNAC 5 cut(s) 263, 484, 810, 1379, 1558
MboII GAAGA 9 cut(s) 206, 284, 797, 800, 950, 1209, 1380, 2058, 2149
MflI RGATCY 4 cut(s) 797, 1567, 1644, 2138
MhlI GDGCHC 2 cut(s) 135, 877
MlsI TGGCCA 1 cut(s) 672
MluCI AATT 9 cut(s) 329, 537, 711, 777, 791, 1595, 1750, 1827, 1986
MluNI TGGCCA 1 cut(s) 672
MlyI GAGTC 4 cut(s) 205, 818, 1201, 2043
MmeI TCCRAC 2 cut(s) 1027, 1220
Mox20I TGGCCA 1 cut(s) 672
MroI TCCGGA 1 cut(s) 223
MscI TGGCCA 1 cut(s) 672
MseI TTAA 7 cut(s) 626, 906, 1148, 1755, 1848, 1892, 2210
MslI CAYNNNNRTG 2 cut(s) 1124, 1449
Msp20I TGGCCA 1 cut(s) 672
MspA1I CMGCKG 2 cut(s) 848, 1814
MspI CCGG 2 cut(s) 224, 296
MspR9I CCNGG 4 cut(s) 760, 965, 1368, 1539
Mva1269I GAATGC 2 cut(s) 1834, 2222
MvaI CCWGG 4 cut(s) 760, 965, 1368, 1539
MvnI CGCG 2 cut(s) 304, 945
NdeI CATATG 1 cut(s) 379
NlaIV GGNNCC 5 cut(s) 70, 651, 652, 1373, 1652
NmeAIII GCCGAG 1 cut(s) 87
NmuCI GTSAC 2 cut(s) 484, 810
NspI RCATGY 3 cut(s) 1355, 1681, 2233
PaeI GCATGC 2 cut(s) 1355, 1681
PagI TCATGA 2 cut(s) 883, 1954
PceI AGGCCT 1 cut(s) 475
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 2 cut(s) 1834, 2222
PfeI GAWTC 2 cut(s) 220, 1271
PflFI GACNNNGTC 1 cut(s) 248
PflMI CCANNNNNTGG 1 cut(s) 1367
PleI GAGTC 4 cut(s) 205, 817, 1200, 2043
PpsI GAGTC 4 cut(s) 205, 817, 1200, 2043
Ppu21I YACGTR 2 cut(s) 481, 878
PpuMI RGGWCCY 1 cut(s) 650
Psp5II RGGWCCY 1 cut(s) 650
Psp6I CCWGG 4 cut(s) 758, 963, 1366, 1537
PspFI CCCAGC 1 cut(s) 717
PspGI CCWGG 4 cut(s) 758, 963, 1366, 1537
PspN4I GGNNCC 5 cut(s) 70, 651, 652, 1373, 1652
PspPI GGNCC 3 cut(s) 414, 650, 1650
PspPPI RGGWCCY 1 cut(s) 650
PsrI GAACNNNNNNTAC 2 cut(s) 1364, 1396
PstI CTGCAG 1 cut(s) 2065
PsuI RGATCY 4 cut(s) 797, 1567, 1644, 2138
PsyI GACNNNGTC 1 cut(s) 248
PvuII CAGCTG 1 cut(s) 1814
RsaI GTAC 3 cut(s) 86, 880, 1320
RsaNI GTAC 3 cut(s) 85, 879, 1319
RseI CAYNNNNRTG 2 cut(s) 1124, 1449
SaqAI TTAA 7 cut(s) 626, 906, 1148, 1755, 1848, 1892, 2210
Sau96I GGNCC 3 cut(s) 414, 650, 1650
ScaI AGTACT 1 cut(s) 1320
SchI GAGTC 4 cut(s) 205, 818, 1201, 2043
ScrFI CCNGG 4 cut(s) 760, 965, 1368, 1539
SduI GDGCHC 2 cut(s) 135, 877
SfaNI GCATC 7 cut(s) 42, 860, 1453, 1472, 1505, 1943, 1981
SfcI CTRYAG 2 cut(s) 1230, 2061
SinI GGWCC 3 cut(s) 414, 650, 1650
SmiMI CAYNNNNRTG 2 cut(s) 1124, 1449
SmlI CTYRAG 2 cut(s) 35, 500
SmoI CTYRAG 2 cut(s) 35, 500
SpeI ACTAGT 1 cut(s) 1321
SphI GCATGC 2 cut(s) 1355, 1681
Sse9I AATT 9 cut(s) 329, 537, 711, 777, 791, 1595, 1750, 1827, 1986
SseBI AGGCCT 1 cut(s) 475
SsiI CCGC 7 cut(s) 11, 17, 23, 175, 422, 848, 1012
SspI AATATT 1 cut(s) 613
SspMI CTAG 3 cut(s) 1322, 1655, 1908
StuI AGGCCT 1 cut(s) 475
StyD4I CCNGG 4 cut(s) 758, 963, 1366, 1537
TaaI ACNGT 2 cut(s) 816, 872
TaiI ACGT 8 cut(s) 86, 252, 483, 880, 919, 1381, 1558, 1708
TaqI TCGA 6 cut(s) 243, 270, 342, 783, 1944, 2165
TaqII GACCGA 1 cut(s) 128
TasI AATT 9 cut(s) 329, 537, 711, 777, 791, 1595, 1750, 1827, 1986
TatI WGTACW 1 cut(s) 1318
TauI GCSGC 5 cut(s) 14, 20, 26, 424, 851
TfiI GAWTC 2 cut(s) 220, 1271
Tru1I TTAA 7 cut(s) 626, 906, 1148, 1755, 1848, 1892, 2210
Tru9I TTAA 7 cut(s) 626, 906, 1148, 1755, 1848, 1892, 2210
TscAI CASTG 3 cut(s) 340, 819, 1874
TseFI GTSAC 2 cut(s) 484, 810
TseI GCWGC 9 cut(s) 14, 20, 527, 733, 845, 1073, 1769, 1814, 1994
Tsp45I GTSAC 2 cut(s) 484, 810
TspDTI ATGAA 5 cut(s) 340, 606, 788, 1091, 1108
TspRI CASTG 3 cut(s) 340, 819, 1874
Tth111I GACNNNGTC 1 cut(s) 248
Van91I CCANNNNNTGG 1 cut(s) 1367
VneI GTGCAC 1 cut(s) 873
VpaK11BI GGWCC 3 cut(s) 414, 650, 1650
XapI RAATTY 6 cut(s) 329, 537, 711, 1595, 1750, 1827
XceI RCATGY 3 cut(s) 1355, 1681, 2233
XcmI CCANNNNNNNNNTGG 2 cut(s) 1148, 1481
XmiI GTMKAC 1 cut(s) 867
XspI CTAG 3 cut(s) 1322, 1655, 1908
ZraI GACGTC 1 cut(s) 250
ZrmI AGTACT 1 cut(s) 1320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.