AarF domain-containing protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39190 AT2G39190 |
| fragaria_vesca | FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 |
| malus_domestica | MD07G1176000.v1.1 |
| prunus_persica | Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 |
| pyrus_communis | pycom07g17020 |
| rosa_chinensis | RchiOBHm_Chr1g0363651 |
| rosa_laevigata | RLG00000027553 |
| rosa_multiflora | Rmu_sc0000548.1_g000012 |
| rosa_roxburghii | Rroxscaffold_4G00293010 |
| rosa_rugosa | Rorug01G0308500 |
| rosa_samantha | Rh1AG317500 Rh1BG280800 Rh1CG297000 Rh1DG312000 |
| rosa_wichuraiana | Rw1G028150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 89, 1291 |
| Acc16I | TGCGCA | 1 cut(s) | 2226 |
| Acc36I | ACCTGC | 1 cut(s) | 1389 |
| AccB1I | GGYRCC | 1 cut(s) | 71 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 487, 1373, 2086 |
| AccI | GTMKAC | 2 cut(s) | 65, 873 |
| AccII | CGCG | 1 cut(s) | 951 |
| AciI | CCGC | 2 cut(s) | 178, 2113 |
| AclWI | GGATC | 5 cut(s) | 437, 811, 1358, 1581, 2479 |
| AcuI | CTGAAG | 5 cut(s) | 194, 453, 478, 2272, 2460 |
| AcyI | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| AfaI | GTAC | 3 cut(s) | 1694, 2281, 2325 |
| AfeI | AGCGCT | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 487, 1373, 2086 |
| AgsI | TTSAA | 5 cut(s) | 920, 1083, 1148, 1669, 1772 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AjnI | CCWGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| Alw21I | GWGCWC | 2 cut(s) | 1482, 2040 |
| Alw44I | GTGCAC | 1 cut(s) | 1478 |
| AlwI | GGATC | 5 cut(s) | 437, 811, 1358, 1581, 2479 |
| Ama87I | CYCGRG | 1 cut(s) | 845 |
| Aor51HI | AGCGCT | 1 cut(s) | 15 |
| AoxI | GGCC | 6 cut(s) | 311, 476, 489, 695, 923, 1541 |
| ApaLI | GTGCAC | 1 cut(s) | 1478 |
| ApeKI | GCWGC | 9 cut(s) | 20, 530, 739, 851, 854, 1745, 1775, 1820, 1910 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1518, 1550 |
| AseI | ATTAAT | 1 cut(s) | 594 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1868 |
| AspA2I | CCTAGG | 1 cut(s) | 970 |
| AspLEI | GCGC | 6 cut(s) | 16, 74, 289, 951, 1910, 2227 |
| AspS9I | GGNCC | 5 cut(s) | 477, 546, 656, 1656, 2077 |
| AsuHPI | GGTGA | 3 cut(s) | 470, 1022, 1205 |
| AsuII | TTCGAA | 2 cut(s) | 220, 1728 |
| AsuNHI | GCTAGC | 1 cut(s) | 16 |
| AvaI | CYCGRG | 1 cut(s) | 845 |
| AvaII | GGWCC | 4 cut(s) | 546, 656, 1656, 2077 |
| AvrII | CCTAGG | 1 cut(s) | 970 |
| AxyI | CCTNAGG | 1 cut(s) | 1396 |
| BaeGI | GKGCMC | 1 cut(s) | 1482 |
| BanI | GGYRCC | 1 cut(s) | 71 |
| BanII | GRGCYC | 1 cut(s) | 2456 |
| BbsI | GAAGAC | 2 cut(s) | 282, 2050 |
| Bbv12I | GWGCWC | 2 cut(s) | 1482, 2040 |
| BbvCI | CCTCAGC | 2 cut(s) | 59, 2360 |
| BbvI | GCAGC | 9 cut(s) | 32, 517, 726, 838, 866, 1732, 1762, 1807, 1922 |
| BccI | CCATC | 8 cut(s) | 887, 1432, 1604, 2026, 2057, 2257, 2291, 2424 |
| BceAI | ACGGC | 2 cut(s) | 938, 2181 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 12, 46, 365, 399 |
| BciT130I | CCWGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| BciVI | GTATCC | 2 cut(s) | 2101, 2440 |
| BclI | TGATCA | 1 cut(s) | 745 |
| BfaI | CTAG | 5 cut(s) | 17, 245, 971, 1577, 2243 |
| BfmI | CTRYAG | 5 cut(s) | 810, 852, 1740, 1746, 2058 |
| BfoI | RGCGCY | 2 cut(s) | 17, 75 |
| BfuAI | ACCTGC | 1 cut(s) | 1389 |
| BfuI | GTATCC | 2 cut(s) | 2101, 2440 |
| BglII | AGATCT | 1 cut(s) | 2239 |
| BisI | GCNGC | 9 cut(s) | 21, 531, 740, 852, 855, 1746, 1776, 1821, 1911 |
| BlnI | CCTAGG | 1 cut(s) | 970 |
| BlsI | GCNGC | 9 cut(s) | 22, 532, 741, 853, 856, 1747, 1777, 1822, 1912 |
| Bme1390I | CCNGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| Bme18I | GGWCC | 4 cut(s) | 546, 656, 1656, 2077 |
| BmeT110I | CYCGRG | 1 cut(s) | 845 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 5 cut(s) | 477, 546, 656, 1656, 2077 |
| BmiI | GGNNCC | 5 cut(s) | 73, 479, 657, 658, 843 |
| BmrFI | CCNGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| BmsI | GCATC | 8 cut(s) | 32, 866, 1267, 1459, 1478, 1511, 1940, 2346 |
| BmtI | GCTAGC | 1 cut(s) | 20 |
| BoxI | GACNNNNGTC | 1 cut(s) | 132 |
| BpiI | GAAGAC | 2 cut(s) | 282, 2050 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1873, 1905 |
| Bpu10I | CCTNAGC | 2 cut(s) | 59, 2360 |
| Bpu14I | TTCGAA | 2 cut(s) | 220, 1728 |
| BpuEI | CTTGAG | 4 cut(s) | 350, 524, 2026, 2470 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1368 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| BsaJI | CCNNGG | 9 cut(s) | 652, 723, 764, 765, 846, 877, 970, 1544, 1951 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1859, 1889 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 487, 1373, 2086 |
| Bse118I | RCCGGY | 1 cut(s) | 46 |
| Bse1I | ACTGG | 2 cut(s) | 1873, 2375 |
| Bse21I | CCTNAGG | 1 cut(s) | 1396 |
| Bse3DI | GCAATG | 4 cut(s) | 293, 2091, 2133, 2181 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1368 |
| BseBI | CCWGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| BseDI | CCNNGG | 9 cut(s) | 652, 723, 764, 765, 846, 877, 970, 1544, 1951 |
| BseGI | GGATG | 9 cut(s) | 589, 775, 1369, 1391, 1469, 1502, 1537, 2018, 2163 |
| BseJI | GATNNNNATC | 1 cut(s) | 1368 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 487, 1373, 2086 |
| BseMI | GCAATG | 4 cut(s) | 293, 2091, 2133, 2181 |
| BseMII | CTCAG | 6 cut(s) | 50, 726, 1410, 2053, 2201, 2351 |
| BseNI | ACTGG | 2 cut(s) | 1873, 2375 |
| BseRI | GAGGAG | 1 cut(s) | 1328 |
| BseSI | GKGCMC | 1 cut(s) | 1482 |
| BseXI | GCAGC | 9 cut(s) | 32, 517, 726, 838, 866, 1732, 1762, 1807, 1922 |
| BseYI | CCCAGC | 1 cut(s) | 1588 |
| BsgI | GTGCAG | 2 cut(s) | 493, 2001 |
| Bsh1236I | CGCG | 1 cut(s) | 951 |
| BshFI | GGCC | 6 cut(s) | 313, 478, 491, 697, 925, 1543 |
| BshNI | GGYRCC | 1 cut(s) | 71 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1482, 2040 |
| BsiHKCI | CYCGRG | 1 cut(s) | 845 |
| BsiSI | CCGG | 1 cut(s) | 47 |
| BslFI | GGGAC | 5 cut(s) | 140, 642, 667, 1561, 1985 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 487, 1373, 2086 |
| BsmFI | GGGAC | 5 cut(s) | 140, 642, 667, 1561, 1985 |
| BsnI | GGCC | 6 cut(s) | 313, 478, 491, 697, 925, 1543 |
| BsoBI | CYCGRG | 1 cut(s) | 845 |
| Bsp119I | TTCGAA | 2 cut(s) | 220, 1728 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1482, 2040, 2456 |
| BspACI | CCGC | 2 cut(s) | 178, 2113 |
| BspANI | GGCC | 6 cut(s) | 313, 478, 491, 697, 925, 1543 |
| BspCNI | CTCAG | 6 cut(s) | 51, 727, 1409, 2052, 2202, 2352 |
| BspFNI | CGCG | 1 cut(s) | 951 |
| BspLI | GGNNCC | 5 cut(s) | 73, 479, 657, 658, 843 |
| BspMAI | CTGCAG | 3 cut(s) | 856, 1750, 2062 |
| BspMI | ACCTGC | 1 cut(s) | 1389 |
| BspOI | GCTAGC | 1 cut(s) | 20 |
| BspPI | GGATC | 5 cut(s) | 437, 811, 1358, 1581, 2479 |
| BspT104I | TTCGAA | 2 cut(s) | 220, 1728 |
| BspT107I | GGYRCC | 1 cut(s) | 71 |
| BsrDI | GCAATG | 4 cut(s) | 293, 2091, 2133, 2181 |
| BsrFI | RCCGGY | 1 cut(s) | 46 |
| BsrI | ACTGG | 2 cut(s) | 1873, 2375 |
| BssAI | RCCGGY | 1 cut(s) | 46 |
| BssECI | CCNNGG | 9 cut(s) | 652, 723, 764, 765, 846, 877, 970, 1544, 1951 |
| BssNI | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| BssT1I | CCWWGG | 3 cut(s) | 723, 970, 1951 |
| Bst2UI | CCWGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| Bst4CI | ACNGT | 5 cut(s) | 878, 1692, 1976, 2049, 2279 |
| Bst6I | CTCTTC | 1 cut(s) | 995 |
| BstACI | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| BstBI | TTCGAA | 2 cut(s) | 220, 1728 |
| BstDSI | CCRYGG | 1 cut(s) | 877 |
| BstEII | GGTNACC | 1 cut(s) | 1010 |
| BstF5I | GGATG | 9 cut(s) | 589, 775, 1369, 1391, 1469, 1502, 1537, 2018, 2163 |
| BstFNI | CGCG | 1 cut(s) | 951 |
| BstH2I | RGCGCY | 2 cut(s) | 17, 75 |
| BstHHI | GCGC | 6 cut(s) | 16, 74, 289, 951, 1910, 2227 |
| BstNI | CCWGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| BstNSI | RCATGY | 4 cut(s) | 58, 1326, 1361, 1687 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 132 |
| BstPI | GGTNACC | 1 cut(s) | 1010 |
| BstSCI | CCNGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| BstSFI | CTRYAG | 5 cut(s) | 810, 852, 1740, 1746, 2058 |
| BstSLI | GKGCMC | 1 cut(s) | 1482 |
| BstUI | CGCG | 1 cut(s) | 951 |
| BstV1I | GCAGC | 9 cut(s) | 32, 517, 726, 838, 866, 1732, 1762, 1807, 1922 |
| BstV2I | GAAGAC | 2 cut(s) | 282, 2050 |
| BstX2I | RGATCY | 3 cut(s) | 803, 1573, 2239 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 772, 1099 |
| BstYI | RGATCY | 3 cut(s) | 803, 1573, 2239 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1396 |
| BsuI | GTATCC | 2 cut(s) | 2101, 2440 |
| BsuRI | GGCC | 6 cut(s) | 313, 478, 491, 697, 925, 1543 |
| BtgI | CCRYGG | 1 cut(s) | 877 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 9 cut(s) | 589, 775, 1369, 1391, 1469, 1502, 1537, 2018, 2163 |
| BtsI | GCAGTG | 1 cut(s) | 2134 |
| BtsIMutI | CAGTG | 4 cut(s) | 206, 1880, 1981, 2134 |
| BveI | ACCTGC | 1 cut(s) | 1389 |
| CfoI | GCGC | 6 cut(s) | 16, 74, 289, 951, 1910, 2227 |
| Cfr10I | RCCGGY | 1 cut(s) | 46 |
| Cfr13I | GGNCC | 5 cut(s) | 477, 546, 656, 1656, 2077 |
| CseI | GACGC | 1 cut(s) | 923 |
| Csp6I | GTAC | 3 cut(s) | 1693, 2280, 2324 |
| CviQI | GTAC | 3 cut(s) | 1693, 2280, 2324 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DraI | TTTAAA | 1 cut(s) | 1762 |
| Eam1104I | CTCTTC | 1 cut(s) | 995 |
| EarI | CTCTTC | 1 cut(s) | 995 |
| EciI | GGCGGA | 1 cut(s) | 2102 |
| Eco130I | CCWWGG | 3 cut(s) | 723, 970, 1951 |
| Eco24I | GRGCYC | 1 cut(s) | 2456 |
| Eco47I | GGWCC | 4 cut(s) | 546, 656, 1656, 2077 |
| Eco47III | AGCGCT | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 5 cut(s) | 194, 453, 478, 2272, 2460 |
| Eco81I | CCTNAGG | 1 cut(s) | 1396 |
| Eco88I | CYCGRG | 1 cut(s) | 845 |
| Eco91I | GGTNACC | 1 cut(s) | 1010 |
| EcoO109I | RGGNCCY | 2 cut(s) | 477, 656 |
| EcoO65I | GGTNACC | 1 cut(s) | 1010 |
| EcoRI | GAATTC | 3 cut(s) | 222, 540, 1614 |
| EcoRII | CCWGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| EcoT14I | CCWWGG | 3 cut(s) | 723, 970, 1951 |
| EcoT38I | GRGCYC | 1 cut(s) | 2456 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 3 cut(s) | 723, 970, 1951 |
| FaqI | GGGAC | 5 cut(s) | 140, 642, 667, 1561, 1985 |
| FauI | CCCGC | 1 cut(s) | 171 |
| FauNDI | CATATG | 1 cut(s) | 382 |
| FbaI | TGATCA | 1 cut(s) | 745 |
| FblI | GTMKAC | 2 cut(s) | 65, 873 |
| Fnu4HI | GCNGC | 9 cut(s) | 21, 531, 740, 852, 855, 1746, 1776, 1821, 1911 |
| FokI | GGATG | 9 cut(s) | 596, 782, 1356, 1378, 1456, 1489, 1544, 2005, 2170 |
| FriOI | GRGCYC | 1 cut(s) | 2456 |
| Fsp4HI | GCNGC | 9 cut(s) | 21, 531, 740, 852, 855, 1746, 1776, 1821, 1911 |
| FspAI | RTGCGCAY | 1 cut(s) | 2226 |
| FspBI | CTAG | 5 cut(s) | 17, 245, 971, 1577, 2243 |
| FspI | TGCGCA | 1 cut(s) | 2226 |
| GlaI | GCGC | 6 cut(s) | 15, 73, 288, 950, 1909, 2226 |
| GluI | GCNGC | 9 cut(s) | 21, 531, 740, 852, 855, 1746, 1776, 1821, 1911 |
| GsaI | CCCAGC | 1 cut(s) | 1592 |
| HaeII | RGCGCY | 2 cut(s) | 17, 75 |
| HaeIII | GGCC | 6 cut(s) | 313, 478, 491, 697, 925, 1543 |
| HapII | CCGG | 1 cut(s) | 47 |
| HgaI | GACGC | 1 cut(s) | 923 |
| HhaI | GCGC | 6 cut(s) | 16, 74, 289, 951, 1910, 2227 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| Hin6I | GCGC | 6 cut(s) | 14, 72, 287, 949, 1908, 2225 |
| HinP1I | GCGC | 6 cut(s) | 14, 72, 287, 949, 1908, 2225 |
| HincII | GTYRAC | 1 cut(s) | 66 |
| HindII | GTYRAC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 2442 |
| HinfI | GANTC | 4 cut(s) | 196, 815, 1198, 1943 |
| HpaII | CCGG | 1 cut(s) | 47 |
| HphI | GGTGA | 3 cut(s) | 470, 1022, 1205 |
| Hpy166II | GTNNAC | 5 cut(s) | 66, 874, 1480, 2163, 2391 |
| Hpy8I | GTNNAC | 5 cut(s) | 66, 874, 1480, 2163, 2391 |
| Hpy99I | CGWCG | 4 cut(s) | 10, 70, 91, 2301 |
| HpyCH4III | ACNGT | 5 cut(s) | 878, 1692, 1976, 2049, 2279 |
| HpyCH4IV | ACGT | 4 cut(s) | 86, 162, 1288, 1711 |
| HpySE526I | ACGT | 4 cut(s) | 86, 162, 1288, 1711 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 86, 1288 |
| HspAI | GCGC | 6 cut(s) | 14, 72, 287, 949, 1908, 2225 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| KflI | GGGWCCC | 1 cut(s) | 656 |
| Ksp22I | TGATCA | 1 cut(s) | 745 |
| LmnI | GCTCC | 3 cut(s) | 307, 1341, 2066 |
| Lsp1109I | GCAGC | 9 cut(s) | 32, 517, 726, 838, 866, 1732, 1762, 1807, 1922 |
| LweI | GCATC | 8 cut(s) | 32, 866, 1267, 1459, 1478, 1511, 1940, 2346 |
| MaeI | CTAG | 5 cut(s) | 17, 245, 971, 1577, 2243 |
| MaeII | ACGT | 4 cut(s) | 86, 162, 1288, 1711 |
| MaeIII | GTNAC | 4 cut(s) | 134, 1010, 1385, 1564 |
| MflI | RGATCY | 3 cut(s) | 803, 1573, 2239 |
| MhlI | GDGCHC | 3 cut(s) | 1482, 2040, 2456 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 2 cut(s) | 824, 1207 |
| MmeI | TCCRAC | 3 cut(s) | 1033, 1041, 1226 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1868 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1130 |
| MspA1I | CMGCKG | 1 cut(s) | 1820 |
| MspI | CCGG | 1 cut(s) | 47 |
| MspR9I | CCNGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| MvaI | CCWGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| MvnI | CGCG | 1 cut(s) | 951 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NdeI | CATATG | 1 cut(s) | 382 |
| NheI | GCTAGC | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 5 cut(s) | 73, 479, 657, 658, 843 |
| NmuCI | GTSAC | 2 cut(s) | 134, 1010 |
| NsbI | TGCGCA | 1 cut(s) | 2226 |
| NspI | RCATGY | 4 cut(s) | 58, 1326, 1361, 1687 |
| NspV | TTCGAA | 2 cut(s) | 220, 1728 |
| PaeI | GCATGC | 4 cut(s) | 58, 1326, 1361, 1687 |
| PasI | CCCWGGG | 1 cut(s) | 765 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1868 |
| PfeI | GAWTC | 2 cut(s) | 196, 1943 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 487, 1373, 2086 |
| PfoI | TCCNGGA | 1 cut(s) | 1372 |
| PkrI | GCNGC | 9 cut(s) | 22, 532, 741, 853, 856, 1747, 1777, 1822, 1912 |
| PleI | GAGTC | 2 cut(s) | 823, 1206 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 2 cut(s) | 823, 1206 |
| PpuMI | RGGWCCY | 1 cut(s) | 656 |
| PshAI | GACNNNNGTC | 1 cut(s) | 132 |
| PshBI | ATTAAT | 1 cut(s) | 594 |
| Psp5II | RGGWCCY | 1 cut(s) | 656 |
| Psp6I | CCWGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| PspEI | GGTNACC | 1 cut(s) | 1010 |
| PspFI | CCCAGC | 1 cut(s) | 1588 |
| PspGI | CCWGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| PspN4I | GGNNCC | 5 cut(s) | 73, 479, 657, 658, 843 |
| PspPI | GGNCC | 5 cut(s) | 477, 546, 656, 1656, 2077 |
| PspPPI | RGGWCCY | 1 cut(s) | 656 |
| PstI | CTGCAG | 3 cut(s) | 856, 1750, 2062 |
| PsuI | RGATCY | 3 cut(s) | 803, 1573, 2239 |
| PvuII | CAGCTG | 1 cut(s) | 1820 |
| RsaI | GTAC | 3 cut(s) | 1694, 2281, 2325 |
| RsaNI | GTAC | 3 cut(s) | 1693, 2280, 2324 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1130 |
| SalI | GTCGAC | 1 cut(s) | 64 |
| SatI | GCNGC | 9 cut(s) | 21, 531, 740, 852, 855, 1746, 1776, 1821, 1911 |
| Sau96I | GGNCC | 5 cut(s) | 477, 546, 656, 1656, 2077 |
| SchI | GAGTC | 2 cut(s) | 824, 1207 |
| ScrFI | CCNGG | 6 cut(s) | 653, 694, 766, 1374, 1545, 1915 |
| SduI | GDGCHC | 3 cut(s) | 1482, 2040, 2456 |
| SfaNI | GCATC | 8 cut(s) | 32, 866, 1267, 1459, 1478, 1511, 1940, 2346 |
| SfcI | CTRYAG | 5 cut(s) | 810, 852, 1740, 1746, 2058 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SfuI | TTCGAA | 2 cut(s) | 220, 1728 |
| SinI | GGWCC | 4 cut(s) | 546, 656, 1656, 2077 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1130 |
| SmlI | CTYRAG | 4 cut(s) | 365, 503, 2005, 2449 |
| SmoI | CTYRAG | 4 cut(s) | 365, 503, 2005, 2449 |
| SphI | GCATGC | 4 cut(s) | 58, 1326, 1361, 1687 |
| SsiI | CCGC | 2 cut(s) | 178, 2113 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspI | AATATT | 1 cut(s) | 1143 |
| SspMI | CTAG | 5 cut(s) | 17, 245, 971, 1577, 2243 |
| StyD4I | CCNGG | 6 cut(s) | 651, 692, 764, 1372, 1543, 1913 |
| StyI | CCWWGG | 3 cut(s) | 723, 970, 1951 |
| TaaI | ACNGT | 5 cut(s) | 878, 1692, 1976, 2049, 2279 |
| TaiI | ACGT | 4 cut(s) | 89, 165, 1291, 1714 |
| TaqI | TCGA | 9 cut(s) | 65, 89, 220, 273, 375, 789, 1341, 1728, 2470 |
| TaqII | GACCGA | 2 cut(s) | 122, 1538 |
| TatI | WGTACW | 1 cut(s) | 2323 |
| TfiI | GAWTC | 2 cut(s) | 196, 1943 |
| TscAI | CASTG | 4 cut(s) | 206, 1880, 1981, 2134 |
| TseFI | GTSAC | 2 cut(s) | 134, 1010 |
| TseI | GCWGC | 9 cut(s) | 20, 530, 739, 851, 854, 1745, 1775, 1820, 1910 |
| Tsp45I | GTSAC | 2 cut(s) | 134, 1010 |
| TspDTI | ATGAA | 5 cut(s) | 343, 794, 1114, 2061, 2367 |
| TspGWI | ACGGA | 1 cut(s) | 747 |
| TspRI | CASTG | 4 cut(s) | 206, 1880, 1981, 2134 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 487, 1373, 2086 |
| VneI | GTGCAC | 1 cut(s) | 1478 |
| VpaK11BI | GGWCC | 4 cut(s) | 546, 656, 1656, 2077 |
| VspI | ATTAAT | 1 cut(s) | 594 |
| XbaI | TCTAGA | 2 cut(s) | 1576, 2242 |
| XceI | RCATGY | 4 cut(s) | 58, 1326, 1361, 1687 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 306 |
| XmaJI | CCTAGG | 1 cut(s) | 970 |
| XmiI | GTMKAC | 2 cut(s) | 65, 873 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1868 |
| XspI | CTAG | 5 cut(s) | 17, 245, 971, 1577, 2243 |
| ZraI | GACGTC | 2 cut(s) | 87, 1289 |