Rroxscaffold_4G00293010

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005758
Physical Location & Seq
Reverse (-)
13252314 .. 13261385
9072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00293010.1

Sequence Viewer

Length: 2655 bp
ATGGCGACGGCGGCTGCGGCGTTGGTTCTCAAGCCGTCGTGCGTGCTGCGACGGCCGAGGGGAGCCAAAACGACGACGTACAAGAGTAAGCGAGCAATAAAGGGACGAGCTTTGGGGGATTTCGGGCACTTCGGTCAGGTGGTCAGCAAGGACGTGGAGTTTCTGAAGCGGAGGATTGGTGGAGGATTTGAGTGGGCGAATAAGACTCTTCGAATTCCGGAGGTGTTCAAGGCCATCGACGACGTCGTTTGGCTTCGTAACCTCGAAGAACCCTATGCCCCTCCCTTGCCGGAGGCTCGTTGGCCTCAACCTTCCTATCCAGTGAGTGAGTTGAGTGTTGAATGTAGTGACAAAATGGCTGTAATTTACAGTGGCTACATTGGTCTGGTCTTATTAGTTGTATTAGGTTTCCTTTGCAACGTCTTTGAAGAAGTAGGAGACTTCATCTCTAACTTATACTATGAAATATGGCTTACCATTGAATTCACTGGTGTTGATCTATTCATGGCGGATCTCAAAGCGTTAGAGGCATATGCACTTTACTTTTATTATCTTTCTAAGAGTTGGTCCAAGCCACTTCCTGAAGTCTATGATCCAGAAAGTGTTGCTGATTATTTCAGTTGCAGGCCTCACGTAGTCACCCTCAGACTTCTTGAGGTAGTTTCCTCCTTTGCTTTTGCTGCAATCAGAATTCGGACATCTGGGATCAAAAAGTATTTACGACCAAGTTCGGGTGATGATTATGAAAGCTTATCACAATACAATATTGGAATGGTGTTAAAAGAAACTATGCTAAATCTGGGTCCCACTTTTATCAAAGTTGGCCAGTCCCTTTCCACCAGACCAGACATTATTGGTGCTGAAATTTCCCAGCCATTGTCTGAGCTGCATGATCAAATCCCTCCTTTTTCCAGGGATGTGGCGATGAAAATTATCGAAGAAGAATTAGGATCTCCTGCTGAGTCACTCTATAGCTACATTTCTGAGAAACCTGAGGCAGCGGCATCTTTTGGTCAGGTCTACCGTGCACGTACTCATGATGGACTGGATGTTGCTGTTAAAGTTCAACGTCCTAACTTGCGTCATATTGTAGTGCGCGATATATACATTCTTCGCCTGGGGCTTGGACTATTGCAAAAGATAGCAAAGAGAAAAGGTGATCTCCGCCTATATGCTGATGAGCTTGGGAAAGGTTTTGTTGGAGAACTGGATTATACTTTAGAAGCTGCAAATGCTTCCAAGTTTCTGGAAGTTCATTCCTCCTATCCGTTCATGCGTGTGCCAAAAGTATTCCAAAGTTTAAGTGGAAAGAGAGTTCTGACAATGGAGTGGATTGTTGGTGAGAGTCCAACCGACTTATTGTCTGTATCTTCTGGAAGCTCTACAGATGATAGCTCTACATATACAGAGAGGCAAAGATTAGATTCCAAAAGGCGTCTCCTTGATCTGGTCAGGAAAGGGGTGGAGGCAGTACTAGTTCAGCTCCTCGAAACAGGATTATTGCATGCTGATCCACATCCTGGGAACCTACGTTACACATCTTCAGGACAAATAGGGTTTTTGGATTTTGGCCTGCTTTGTCAGATGGAAAAGAGGCATCAATATGCTATGCTTGCATCTATTGTCCACATTGTAAATGGAGATTGGGCATCCCTTGTCCAATGTTTGACTGAAATGGATGTTGTAAGACCAGGGACTAATATCAGACGTGTAACAATGGATCTGGAATATGACTTGGGGGAGGTAGAATTCAGAGATGGAGTTCCTGATGTGAAGTTCAGCAGGGTTTTGGGTAAGATCTGGTCCCTAGCCTTCAAGTATCATTTTCGCATGCCACCCTACTACTCGCTTGTTCTACGTTCTCTTGCTTCCTTTGAAGGATTAGCCGTTGCTGGAGATAGAAATTTTAAGACATTTGAAGCTGCATACCCTTATGTCGTTCGGAAACTACTTACTGAAAACTCAGCTGCCACAAGGAAAATTTTGCATTCGGTAGTTTTTAACAAAAAGAAGGAGTTCCAGTGGCAAAAGCTTGGTCTTTTCTTAAAAGTAGGCGCAACTAGGAAAGGTTTGAATGGGAGTATAGCATCAAAACTTGACACTTCTCATGATTATTTACCTACAAGAGACAATGGTGAAATTGATGCTGCAAACTTGGTCCTGAAGCTTTTACCATCTAAAGATGGTGTTGTGCTGAGAAGACTCTTGATGACTGCAGATGGAGCTTCATTGATCCAAGCAATGGCATCCAAGGAAGCAAAGTTTTTCCGCCACCAATTTTGCAGGTTTGTTGCAGACATTTTGCATCAATGGATGCTTGAAACGTTTGTGCGGGGCATTACGACCGTTCATTATAGCTCTAATTTGAGAGTGGCAAGTGGACCTGACAACAAAGAACTAGGTCCATCTTCCAGACTATCTACTCCAATTTATGATTATCGCTCTGTCCTCAGAGATCGACGGCTCAAAGTGATTTTCTCAAACATAATAAACTCTGCAAGGAAAAATCCAGTACTGATGCTGAGGTTCTGTTGGACTTCCTTTGTTATGTCTGTTGTGGCTTTAGCTTTGGCTTCTCATCGTGTTCTAATATCCTTCTCTGAAGCTTACTTGGGCCCGATATCTTTTGCTTCGAAACAGTATGCGATCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1 APH DCP2 NUDIX

Protein Analysis

884

Amino Acids

99.45

Weight (kDa)

9.16

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 296 - 554 2.3e-68 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 2274
AccB7I CCANNNNNTGG 2 cut(s) 1520, 2242
AccI GTMKAC 1 cut(s) 1020
AccII CGCG 1 cut(s) 1098
AccIII TCCGGA 1 cut(s) 217
AciI CCGC 8 cut(s) 11, 17, 169, 509, 1001, 1165, 2269, 2332
AclI AACGTT 1 cut(s) 2324
AclWI GGATC 8 cut(s) 519, 587, 713, 958, 1505, 1728, 2227, 2641
AcoI YGGCCR 2 cut(s) 53, 823
AcsI RAATTY 7 cut(s) 213, 482, 690, 864, 1748, 1903, 1980
AcuI CTGAAG 5 cut(s) 185, 603, 1527, 2183, 2622
AcyI GRCGYC 2 cut(s) 243, 1435
AfaI GTAC 4 cut(s) 80, 1033, 1473, 2514
AfiI CCNNNNNNNGG 4 cut(s) 731, 1447, 1520, 2242
AflIII ACRYGT 1 cut(s) 1708
AhdI GACNNNNNGTC 1 cut(s) 1360
AhlI ACTAGT 1 cut(s) 1474
AjiI CACGTC 2 cut(s) 154, 1709
AjnI CCWGG 4 cut(s) 911, 1116, 1519, 1690
AloI GAACNNNNNNTCC 2 cut(s) 1299, 1331
Alw21I GWGCWC 1 cut(s) 1030
Alw26I GTCTC 3 cut(s) 432, 1442, 2121
Alw44I GTGCAC 1 cut(s) 1026
AlwI GGATC 8 cut(s) 519, 587, 713, 958, 1505, 1728, 2227, 2641
Aor13HI TCCGGA 1 cut(s) 217
AoxI GGCC 7 cut(s) 53, 231, 302, 626, 823, 1570, 2614
ApaI GGGCCC 1 cut(s) 2618
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 9 cut(s) 14, 46, 680, 886, 998, 1226, 1922, 1967, 2147
ApoI RAATTY 7 cut(s) 213, 482, 690, 864, 1748, 1903, 1980
ArsI GACNNNNNNTTYG 2 cut(s) 2020, 2052
Asp700I GAANNNNTTC 1 cut(s) 2015
AspLEI GCGC 2 cut(s) 1098, 2057
AspS9I GGNCC 8 cut(s) 567, 803, 1803, 2158, 2381, 2402, 2614, 2615
AsuHPI GGTGA 5 cut(s) 631, 746, 1169, 1352, 2147
AsuII TTCGAA 2 cut(s) 211, 2633
AvaII GGWCC 6 cut(s) 567, 803, 1803, 2158, 2381, 2402
AxyI CCTNAGG 1 cut(s) 993
BaeGI GKGCMC 3 cut(s) 129, 1030, 2618
BalI TGGCCA 1 cut(s) 825
BanII GRGCYC 1 cut(s) 2618
BbsI GAAGAC 1 cut(s) 2206
Bbv12I GWGCWC 1 cut(s) 1030
BbvCI CCTCAGC 1 cut(s) 2522
BbvI GCAGC 8 cut(s) 33, 667, 873, 1010, 1213, 1909, 1954, 2134
BccI CCATC 8 cut(s) 242, 1034, 1579, 1751, 2177, 2182, 2213, 2413
BceAI ACGGC 5 cut(s) 19, 24, 68, 1871, 2477
BciT130I CCWGG 4 cut(s) 913, 1118, 1521, 1692
BclI TGATCA 1 cut(s) 892
BcoDI GTCTC 3 cut(s) 432, 1442, 2121
BcuI ACTAGT 1 cut(s) 1474
BfaI CTAG 4 cut(s) 1475, 1808, 2061, 2399
BfmI CTRYAG 3 cut(s) 970, 1383, 2214
BfuAI ACCTGC 1 cut(s) 2274
BglII AGATCT 1 cut(s) 1797
BmcAI AGTACT 2 cut(s) 1473, 2514
Bme1390I CCNGG 4 cut(s) 913, 1118, 1521, 1692
Bme18I GGWCC 6 cut(s) 567, 803, 1803, 2158, 2381, 2402
BmeRI GACNNNNNGTC 1 cut(s) 1360
BmgBI CACGTC 2 cut(s) 154, 1709
BmgT120I GGNCC 8 cut(s) 567, 803, 1803, 2158, 2381, 2402, 2614, 2615
BmiI GGNNCC 6 cut(s) 64, 804, 805, 1526, 1805, 2616
BmrFI CCNGG 4 cut(s) 913, 1118, 1521, 1692
BpiI GAAGAC 1 cut(s) 2206
BpmI CTGGAG 1 cut(s) 1914
Bpu10I CCTNAGC 1 cut(s) 2522
Bpu14I TTCGAA 2 cut(s) 211, 2633
BpuEI CTTGAG 2 cut(s) 14, 674
BsaAI YACGTR 2 cut(s) 634, 1031
BsaBI GATNNNNATC 1 cut(s) 1515
BsaHI GRCGYC 2 cut(s) 243, 1435
BsaJI CCNNGG 6 cut(s) 56, 912, 1117, 1520, 1691, 2250
BsaWI WCCGGW 1 cut(s) 217
BsaXI ACNNNNNCTCC 4 cut(s) 163, 193, 2006, 2036
Bsc4I CCNNNNNNNGG 4 cut(s) 731, 1447, 1520, 2242
Bse1I ACTGG 7 cut(s) 320, 493, 826, 1050, 1212, 2020, 2510
Bse21I CCTNAGG 1 cut(s) 993
Bse3DI GCAATG 1 cut(s) 2247
Bse8I GATNNNNATC 1 cut(s) 1515
BseAI TCCGGA 1 cut(s) 217
BseBI CCWGG 4 cut(s) 913, 1118, 1521, 1692
BseDI CCNNGG 6 cut(s) 56, 912, 1117, 1520, 1691, 2250
BseGI GGATG 7 cut(s) 922, 1054, 1516, 1649, 1684, 2246, 2319
BseJI GATNNNNATC 1 cut(s) 1515
BseLI CCNNNNNNNGG 4 cut(s) 731, 1447, 1520, 2242
BseMI GCAATG 1 cut(s) 2247
BseMII CTCAG 9 cut(s) 658, 873, 951, 975, 984, 1977, 2186, 2464, 2513
BseNI ACTGG 7 cut(s) 320, 493, 826, 1050, 1212, 2020, 2510
BseRI GAGGAG 1 cut(s) 1475
BseSI GKGCMC 3 cut(s) 129, 1030, 2618
BseX3I CGGCCG 1 cut(s) 53
BseXI GCAGC 8 cut(s) 33, 667, 873, 1010, 1213, 1909, 1954, 2134
BseYI CCCAGC 1 cut(s) 870
Bsh1236I CGCG 1 cut(s) 1098
Bsh1285I CGRYCG 2 cut(s) 56, 2346
BshFI GGCC 7 cut(s) 55, 233, 304, 628, 825, 1572, 2616
BsiEI CGRYCG 2 cut(s) 56, 2346
BsiHKAI GWGCWC 1 cut(s) 1030
BsiSI CCGG 2 cut(s) 218, 290
BslFI GGGAC 5 cut(s) 117, 789, 814, 1708, 1789
BslI CCNNNNNNNGG 4 cut(s) 731, 1447, 1520, 2242
BsmAI GTCTC 3 cut(s) 432, 1442, 2121
BsmBI CGTCTC 1 cut(s) 1442
BsmFI GGGAC 5 cut(s) 117, 789, 814, 1708, 1789
BsmI GAATGC 1 cut(s) 1987
BsnI GGCC 7 cut(s) 55, 233, 304, 628, 825, 1572, 2616
Bsp119I TTCGAA 2 cut(s) 211, 2633
Bsp120I GGGCCC 1 cut(s) 2614
Bsp1286I GDGCHC 3 cut(s) 129, 1030, 2618
Bsp13I TCCGGA 1 cut(s) 217
BspACI CCGC 8 cut(s) 11, 17, 169, 509, 1001, 1165, 2269, 2332
BspANI GGCC 7 cut(s) 55, 233, 304, 628, 825, 1572, 2616
BspCNI CTCAG 9 cut(s) 657, 874, 952, 976, 985, 1976, 2187, 2463, 2514
BspEI TCCGGA 1 cut(s) 217
BspFNI CGCG 1 cut(s) 1098
BspHI TCATGA 2 cut(s) 1036, 2107
BspLI GGNNCC 6 cut(s) 64, 804, 805, 1526, 1805, 2616
BspMAI CTGCAG 1 cut(s) 2218
BspMI ACCTGC 1 cut(s) 2274
BspPI GGATC 8 cut(s) 519, 587, 713, 958, 1505, 1728, 2227, 2641
BspT104I TTCGAA 2 cut(s) 211, 2633
BsrDI GCAATG 1 cut(s) 2247
BsrI ACTGG 7 cut(s) 320, 493, 826, 1050, 1212, 2020, 2510
BssECI CCNNGG 6 cut(s) 56, 912, 1117, 1520, 1691, 2250
BssNI GRCGYC 2 cut(s) 243, 1435
BssT1I CCWWGG 1 cut(s) 2250
Bst2UI CCWGG 4 cut(s) 913, 1118, 1521, 1692
Bst4CI ACNGT 4 cut(s) 371, 1025, 2347, 2640
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 2 cut(s) 243, 1435
BstBAI YACGTR 2 cut(s) 634, 1031
BstBI TTCGAA 2 cut(s) 211, 2633
BstC8I GCNNGC 7 cut(s) 44, 93, 626, 1506, 1574, 1614, 1832
BstF5I GGATG 7 cut(s) 922, 1054, 1516, 1649, 1684, 2246, 2319
BstFNI CGCG 1 cut(s) 1098
BstHHI GCGC 2 cut(s) 1098, 2057
BstMAI GTCTC 3 cut(s) 432, 1442, 2121
BstMCI CGRYCG 2 cut(s) 56, 2346
BstMWI GCNNNNNNNGC 8 cut(s) 11, 17, 52, 527, 680, 1232, 1613, 2222
BstNI CCWGG 4 cut(s) 913, 1118, 1521, 1692
BstNSI RCATGY 2 cut(s) 1508, 1834
BstSCI CCNGG 4 cut(s) 911, 1116, 1519, 1690
BstSFI CTRYAG 3 cut(s) 970, 1383, 2214
BstSLI GKGCMC 3 cut(s) 129, 1030, 2618
BstUI CGCG 1 cut(s) 1098
BstV1I GCAGC 8 cut(s) 33, 667, 873, 1010, 1213, 1909, 1954, 2134
BstV2I GAAGAC 1 cut(s) 2206
BstX2I RGATCY 4 cut(s) 511, 950, 1720, 1797
BstXI CCANNNNNNTGG 2 cut(s) 919, 1246
BstYI RGATCY 4 cut(s) 511, 950, 1720, 1797
BstZI CGGCCG 1 cut(s) 53
Bsu36I CCTNAGG 1 cut(s) 993
BsuRI GGCC 7 cut(s) 55, 233, 304, 628, 825, 1572, 2616
BtgZI GCGATG 1 cut(s) 938
BtrI CACGTC 2 cut(s) 154, 1709
BtsCI GGATG 7 cut(s) 922, 1054, 1516, 1649, 1684, 2246, 2319
BtsIMutI CAGTG 4 cut(s) 327, 376, 486, 2027
BveI ACCTGC 1 cut(s) 2274
Cac8I GCNNGC 7 cut(s) 44, 93, 626, 1506, 1574, 1614, 1832
CciI TCATGA 2 cut(s) 1036, 2107
CfoI GCGC 2 cut(s) 1098, 2057
Cfr13I GGNCC 8 cut(s) 567, 803, 1803, 2158, 2381, 2402, 2614, 2615
CseI GACGC 2 cut(s) 1070, 1424
Csp6I GTAC 4 cut(s) 79, 1032, 1472, 2513
CspCI CAANNNNNGTGG 2 cut(s) 2261, 2296
CviAII CATG 8 cut(s) 505, 890, 1037, 1273, 1505, 1831, 2108, 2652
CviQI GTAC 4 cut(s) 79, 1032, 1472, 2513
DriI GACNNNNNGTC 1 cut(s) 1360
EaeI YGGCCR 2 cut(s) 53, 823
EagI CGGCCG 1 cut(s) 53
Eam1104I CTCTTC 1 cut(s) 213
Eam1105I GACNNNNNGTC 1 cut(s) 1360
EarI CTCTTC 1 cut(s) 213
EciI GGCGGA 3 cut(s) 524, 1154, 2258
EclXI CGGCCG 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 2250
Eco147I AGGCCT 1 cut(s) 628
Eco24I GRGCYC 1 cut(s) 2618
Eco32I GATATC 1 cut(s) 2622
Eco47I GGWCC 6 cut(s) 567, 803, 1803, 2158, 2381, 2402
Eco52I CGGCCG 1 cut(s) 53
Eco57I CTGAAG 5 cut(s) 185, 603, 1527, 2183, 2622
Eco81I CCTNAGG 1 cut(s) 993
EcoO109I RGGNCCY 1 cut(s) 803
EcoRI GAATTC 4 cut(s) 213, 482, 690, 1748
EcoRII CCWGG 4 cut(s) 911, 1116, 1519, 1690
EcoRV GATATC 1 cut(s) 2622
EcoT14I CCWWGG 1 cut(s) 2250
EcoT38I GRGCYC 1 cut(s) 2618
ErhI CCWWGG 1 cut(s) 2250
Esp3I CGTCTC 1 cut(s) 1442
FaeI CATG 8 cut(s) 508, 893, 1040, 1276, 1508, 1834, 2111, 2655
FaqI GGGAC 5 cut(s) 117, 789, 814, 1708, 1789
FatI CATG 8 cut(s) 504, 889, 1036, 1272, 1504, 1830, 2107, 2651
FauI CCCGC 1 cut(s) 2325
FauNDI CATATG 1 cut(s) 532
FbaI TGATCA 1 cut(s) 892
FblI GTMKAC 1 cut(s) 1020
FokI GGATG 7 cut(s) 929, 1061, 1503, 1636, 1691, 2233, 2326
FriOI GRGCYC 1 cut(s) 2618
FspBI CTAG 4 cut(s) 1475, 1808, 2061, 2399
GlaI GCGC 2 cut(s) 1097, 2056
GsaI CCCAGC 1 cut(s) 874
GsuI CTGGAG 1 cut(s) 1914
HaeIII GGCC 7 cut(s) 55, 233, 304, 628, 825, 1572, 2616
HapII CCGG 2 cut(s) 218, 290
HgaI GACGC 2 cut(s) 1070, 1424
HhaI GCGC 2 cut(s) 1098, 2057
Hin1I GRCGYC 2 cut(s) 243, 1435
Hin1II CATG 8 cut(s) 508, 893, 1040, 1276, 1508, 1834, 2111, 2655
Hin6I GCGC 2 cut(s) 1096, 2055
HinP1I GCGC 2 cut(s) 1096, 2055
HindIII AAGCTT 4 cut(s) 748, 2030, 2165, 2604
HinfI GANTC 5 cut(s) 205, 962, 1345, 1424, 2202
HpaII CCGG 2 cut(s) 218, 290
HphI GGTGA 5 cut(s) 631, 746, 1169, 1352, 2147
Hpy166II GTNNAC 4 cut(s) 1021, 1028, 1627, 2381
Hpy8I GTNNAC 4 cut(s) 1021, 1028, 1627, 2381
Hpy99I CGWCG 9 cut(s) 10, 40, 54, 76, 79, 242, 245, 248, 2463
HpyAV CCTTC 5 cut(s) 321, 1822, 1871, 2005, 2605
HpyCH4III ACNGT 4 cut(s) 371, 1025, 2347, 2640
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 17, 52, 527, 680, 1232, 1613, 2222
Hsp92I GRCGYC 2 cut(s) 243, 1435
Hsp92II CATG 8 cut(s) 508, 893, 1040, 1276, 1508, 1834, 2111, 2655
HspAI GCGC 2 cut(s) 1096, 2055
KflI GGGWCCC 1 cut(s) 803
Kpn2I TCCGGA 1 cut(s) 217
Ksp22I TGATCA 1 cut(s) 892
LmnI GCTCC 3 cut(s) 62, 1488, 2222
Lsp1109I GCAGC 8 cut(s) 33, 667, 873, 1010, 1213, 1909, 1954, 2134
MaeI CTAG 4 cut(s) 1475, 1808, 2061, 2399
MaeIII GTNAC 6 cut(s) 257, 347, 637, 963, 1532, 1711
MflI RGATCY 4 cut(s) 511, 950, 1720, 1797
MhlI GDGCHC 3 cut(s) 129, 1030, 2618
MlsI TGGCCA 1 cut(s) 825
MluNI TGGCCA 1 cut(s) 825
MlyI GAGTC 4 cut(s) 199, 971, 1354, 2196
MmeI TCCRAC 3 cut(s) 1180, 1373, 2513
Mox20I TGGCCA 1 cut(s) 825
MroI TCCGGA 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 2015
MscI TGGCCA 1 cut(s) 825
MseI TTAA 6 cut(s) 779, 1059, 1301, 1908, 2001, 2045
MslI CAYNNNNRTG 2 cut(s) 1277, 1602
Msp20I TGGCCA 1 cut(s) 825
MspA1I CMGCKG 2 cut(s) 1001, 1967
MspI CCGG 2 cut(s) 218, 290
MspR9I CCNGG 4 cut(s) 913, 1118, 1521, 1692
Mva1269I GAATGC 1 cut(s) 1987
MvaI CCWGG 4 cut(s) 913, 1118, 1521, 1692
MvnI CGCG 1 cut(s) 1098
MwoI GCNNNNNNNGC 8 cut(s) 11, 17, 52, 527, 680, 1232, 1613, 2222
NdeI CATATG 1 cut(s) 532
NlaIII CATG 8 cut(s) 508, 893, 1040, 1276, 1508, 1834, 2111, 2655
NlaIV GGNNCC 6 cut(s) 64, 804, 805, 1526, 1805, 2616
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 3 cut(s) 347, 637, 963
NspI RCATGY 2 cut(s) 1508, 1834
NspV TTCGAA 2 cut(s) 211, 2633
PaeI GCATGC 2 cut(s) 1508, 1834
PagI TCATGA 2 cut(s) 1036, 2107
PceI AGGCCT 1 cut(s) 628
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PctI GAATGC 1 cut(s) 1987
PdmI GAANNNNTTC 1 cut(s) 2015
PfeI GAWTC 1 cut(s) 1424
PflFI GACNNNGTC 1 cut(s) 242
PflMI CCANNNNNTGG 2 cut(s) 1520, 2242
PleI GAGTC 4 cut(s) 199, 970, 1353, 2196
PpsI GAGTC 4 cut(s) 199, 970, 1353, 2196
Ppu21I YACGTR 2 cut(s) 634, 1031
PpuMI RGGWCCY 1 cut(s) 803
Psp1406I AACGTT 1 cut(s) 2324
Psp5II RGGWCCY 1 cut(s) 803
Psp6I CCWGG 4 cut(s) 911, 1116, 1519, 1690
PspFI CCCAGC 1 cut(s) 870
PspGI CCWGG 4 cut(s) 911, 1116, 1519, 1690
PspN4I GGNNCC 6 cut(s) 64, 804, 805, 1526, 1805, 2616
PspOMI GGGCCC 1 cut(s) 2614
PspPI GGNCC 8 cut(s) 567, 803, 1803, 2158, 2381, 2402, 2614, 2615
PspPPI RGGWCCY 1 cut(s) 803
PsrI GAACNNNNNNTAC 2 cut(s) 1517, 1549
PstI CTGCAG 1 cut(s) 2218
PsuI RGATCY 4 cut(s) 511, 950, 1720, 1797
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 1967
RsaI GTAC 4 cut(s) 80, 1033, 1473, 2514
RsaNI GTAC 4 cut(s) 79, 1032, 1472, 2513
RseI CAYNNNNRTG 2 cut(s) 1277, 1602
SaqAI TTAA 6 cut(s) 779, 1059, 1301, 1908, 2001, 2045
Sau96I GGNCC 8 cut(s) 567, 803, 1803, 2158, 2381, 2402, 2614, 2615
ScaI AGTACT 2 cut(s) 1473, 2514
SchI GAGTC 4 cut(s) 199, 971, 1354, 2196
ScrFI CCNGG 4 cut(s) 913, 1118, 1521, 1692
SduI GDGCHC 3 cut(s) 129, 1030, 2618
SfcI CTRYAG 3 cut(s) 970, 1383, 2214
SfuI TTCGAA 2 cut(s) 211, 2633
SinI GGWCC 6 cut(s) 567, 803, 1803, 2158, 2381, 2402
SmiMI CAYNNNNRTG 2 cut(s) 1277, 1602
SmlI CTYRAG 2 cut(s) 29, 653
SmoI CTYRAG 2 cut(s) 29, 653
SpeI ACTAGT 1 cut(s) 1474
SphI GCATGC 2 cut(s) 1508, 1834
SseBI AGGCCT 1 cut(s) 628
SsiI CCGC 8 cut(s) 11, 17, 169, 509, 1001, 1165, 2269, 2332
SspI AATATT 1 cut(s) 766
SspMI CTAG 4 cut(s) 1475, 1808, 2061, 2399
StuI AGGCCT 1 cut(s) 628
StyD4I CCNGG 4 cut(s) 911, 1116, 1519, 1690
StyI CCWWGG 1 cut(s) 2250
TaaI ACNGT 4 cut(s) 371, 1025, 2347, 2640
TaqI TCGA 7 cut(s) 211, 237, 264, 936, 1488, 2458, 2633
TaqII GACCGA 1 cut(s) 122
TatI WGTACW 2 cut(s) 1471, 2512
TauI GCSGC 3 cut(s) 14, 20, 1004
TfiI GAWTC 1 cut(s) 1424
Tru1I TTAA 6 cut(s) 779, 1059, 1301, 1908, 2001, 2045
Tru9I TTAA 6 cut(s) 779, 1059, 1301, 1908, 2001, 2045
TscAI CASTG 4 cut(s) 327, 376, 493, 2027
TseFI GTSAC 3 cut(s) 347, 637, 963
TseI GCWGC 9 cut(s) 14, 46, 680, 886, 998, 1226, 1922, 1967, 2147
Tsp45I GTSAC 3 cut(s) 347, 637, 963
TspDTI ATGAA 9 cut(s) 433, 477, 493, 759, 941, 1244, 1261, 2217, 2339
TspGWI ACGGA 1 cut(s) 1257
TspRI CASTG 4 cut(s) 327, 376, 493, 2027
Tth111I GACNNNGTC 1 cut(s) 242
Van91I CCANNNNNTGG 2 cut(s) 1520, 2242
VneI GTGCAC 1 cut(s) 1026
VpaK11BI GGWCC 6 cut(s) 567, 803, 1803, 2158, 2381, 2402
XapI RAATTY 7 cut(s) 213, 482, 690, 864, 1748, 1903, 1980
XceI RCATGY 2 cut(s) 1508, 1834
XcmI CCANNNNNNNNNTGG 2 cut(s) 1301, 1634
XmiI GTMKAC 1 cut(s) 1020
XmnI GAANNNNTTC 1 cut(s) 2015
XspI CTAG 4 cut(s) 1475, 1808, 2061, 2399
ZraI GACGTC 1 cut(s) 244
ZrmI AGTACT 2 cut(s) 1473, 2514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.