Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000548.1

Orthogroup ID

OG0005758

Physical Location & Seq

Genomic Coordinates Forward (+)

48693 .. 56178

Gene Structure 7486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000548.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

atggcgacggcggctgcggctgcggcgctggttctcaagccgtcgtgcgtgatgcgacggccgaggggagccaaagcgacgacgtacaagagtaagcgagcaataaagggacgagctttgtgggatttcgggcacttcggtcaggtggtcagcaaggatgtggagtttttgaagcggaggattggtggaggatttgagtgggcgaataagactcttcggattccggaggtgttcaaggccatcgacgacgtcgtttggcttcgtaacctcgaagaaccctatgcccctcccttgccggaggcgcgttggcctcaaccttcctatccagaattcactggtgtcgatctattcatggcggatctcaaagcgttagaggcatatgctctttacttttattatctttctaagagttggtccaagccgcttcctgaagtctatgatccagaaagtgttgctgattatttcagttgcaggcctcacgtagtcacccttagacttcttgaggtagtttcctcctttgcttttgctgcaatcagaattcggacatctgggatcaaaaagtatttacgaccaagttcgggtgatgattatgaaagcttatcacaatacaatattggaatggtgttaaaagaaactatgctaaatctgggtcccacttttatcaaagttggccagtccctttccaccagaccagacattattggtgctgaaatttcccagccattgtctgagctgcatgatcaaatccctcctttttccagggatgtggcgatgaaaattattgaagaagaattaggatctcctgctgagtcactctatagctacatttctgagaaacctgaggcagcggcatcttttggtcaggtctaccgtgcacgtactcatgatggactggatgttgctgttaaagttcaacgtcctaacttgcgtcatattgtagtgcgcgatatatacattcttcgcctggggcttggactattgcaaaagatagcaaagagaaaaggtgatctccgcctatatgccgatgagcttgggaaaggttttgttggagaactggattatactttagaagctgcaaatgcttccaagtttctggaagttcattcgtcctatccattcatgcttgtgccaaaagtattccaaagtttaagtggaaagagagttctgacaatggagtggattgttggtgagagtccaaccgacttattgtctgtatcttctggaagctctacagatgatagctctacatatacagagaggcaaagattagattccaaaaggcgtctccttgatctggtcaggaaaggggtggaggcagtactagttcagctcctcgaaacaggattattgcatgctgatccacatcctgggaacctacgttacacatcttcaggacaaatagggtttttggattttggcctgctttgtcagatggaaaagaggcatcaatatgctatgcttgcatctattgtccacattgtaaatggagattgggcatcccttgtccaatgtttgactgaaatggatgttgtaagaccagggactaatatcagacgtgtaacaatggatctggaatatgacttgggggaggtagaattcagagatggagttcctgatgtgaagttcagcagggttttgggtaagatctggtccctagccttcaagtatcattttcgcatgccaccctactactcgcttgttctacgttctcttgcttcctttgaaggattagccgtcgctggagatagaaattttaagacatttgaagctgcatacccttatgtcgttcggaaactacttactgaaaactcagctgccacaaggaaaattttgcattcggtagtttttaacaaaaagagggagttccagtggcaaaagcttggtcttttcttaaaagtaggcgcaactaggaaaggtttgaatgggagtatagcatcaaaactcgacacttctcatgattatttacctacaagagacaatggtgaaattgatgctgcaaacttggtcctgaagcttttaccatctaaagatggtgttgtgctgagaagactcttgatgactgcagatggagcttcattgatccaagcaatggcatccaaggaagcaaagtttttccgccaccaattttgcaggtttgttgcagacattttgcatcaatggatgcttgaaacgtttgtgcggggcattacgacagttcattatagctctaatttgagagtggcaagtggacctgacaacaaagaactaggtccatcttccagactatctactccaatttatgattatcgctctgtcctcagagatcgacggctcaaagtgattttctcaaacataataaactctgcaaggaaaaatccagtactgatgctgaggttctgttggacttcctttgttatgtctgttgtggctttagctttggcttctcatcgtgttctaatatccttctctgaagcttacttgggcccgatatcttttgcttcgaaacagtatgcgatcccatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 APH DCP2 NUDIX

Protein Analysis

833

Amino Acids

93.74

Weight (kDa)

9.4

Isoelectric Point (pI)

41.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005758)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39190 AT2G39190
fragaria_vesca	FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760 FvH4_7g19760
malus_domestica	MD07G1176000.v1.1
prunus_persica	Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1 Prupe.8G142600_v2.0.a1
pyrus_communis	pycom07g17020
rosa_chinensis	RchiOBHm_Chr1g0363651
rosa_laevigata	RLG00000027553
rosa_multiflora	Rmu_sc0000548.1_g000012
rosa_roxburghii	Rroxscaffold_4G00293010
rosa_rugosa	Rorug01G0308500
rosa_samantha	Rh1AG317500 Rh1BG280800 Rh1CG297000 Rh1DG312000
rosa_wichuraiana	Rw1G028150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	252
Acc36I	ACCTGC	1 cut(s)	2121
AccB7I	CCANNNNNTGG	2 cut(s)	1367, 2089
AccI	GTMKAC	1 cut(s)	867
AccII	CGCG	2 cut(s)	304, 945
AccIII	TCCGGA	1 cut(s)	223
AclI	AACGTT	1 cut(s)	2171
AclWI	GGATC	8 cut(s)	366, 434, 560, 805, 1352, 1575, 2074, 2488
AcoI	YGGCCR	2 cut(s)	59, 670
AcsI	RAATTY	6 cut(s)	329, 537, 711, 1595, 1750, 1827
AcuI	CTGAAG	4 cut(s)	450, 1374, 2030, 2469
AcyI	GRCGYC	2 cut(s)	249, 1282
AfaI	GTAC	4 cut(s)	86, 880, 1320, 2361
AfiI	CCNNNNNNNGG	4 cut(s)	578, 1294, 1367, 2089
AflIII	ACRYGT	1 cut(s)	1555
AgsI	TTSAA	9 cut(s)	172, 235, 785, 914, 1663, 1724, 1766, 1921, 2168
AhdI	GACNNNNNGTC	1 cut(s)	1207
AhlI	ACTAGT	1 cut(s)	1321
AjiI	CACGTC	1 cut(s)	1556
AjnI	CCWGG	4 cut(s)	758, 963, 1366, 1537
AloI	GAACNNNNNNTCC	2 cut(s)	1146, 1178
Alw21I	GWGCWC	1 cut(s)	877
Alw26I	GTCTC	2 cut(s)	1289, 1968
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	8 cut(s)	366, 434, 560, 805, 1352, 1575, 2074, 2488
Aor13HI	TCCGGA	1 cut(s)	223
AoxI	GGCC	7 cut(s)	59, 237, 308, 473, 670, 1417, 2461
ApaI	GGGCCC	1 cut(s)	2465
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	9 cut(s)	14, 20, 527, 733, 845, 1073, 1769, 1814, 1994
ApoI	RAATTY	6 cut(s)	329, 537, 711, 1595, 1750, 1827
ArsI	GACNNNNNNTTYG	2 cut(s)	1867, 1899
AspLEI	GCGC	4 cut(s)	28, 304, 945, 1904
AspS9I	GGNCC	8 cut(s)	414, 650, 1650, 2005, 2228, 2249, 2461, 2462
AsuHPI	GGTGA	5 cut(s)	478, 593, 1016, 1199, 1994
AsuII	TTCGAA	1 cut(s)	2480
AvaII	GGWCC	6 cut(s)	414, 650, 1650, 2005, 2228, 2249
AxyI	CCTNAGG	1 cut(s)	840
BaeGI	GKGCMC	3 cut(s)	135, 877, 2465
BalI	TGGCCA	1 cut(s)	672
BanII	GRGCYC	1 cut(s)	2465
BbsI	GAAGAC	1 cut(s)	2053
Bbv12I	GWGCWC	1 cut(s)	877
BbvCI	CCTCAGC	1 cut(s)	2369
BbvI	GCAGC	8 cut(s)	7, 514, 720, 857, 1060, 1756, 1801, 1981
BccI	CCATC	8 cut(s)	248, 881, 1426, 1598, 2024, 2029, 2060, 2260
BceAI	ACGGC	5 cut(s)	24, 25, 74, 1718, 2324
BciT130I	CCWGG	4 cut(s)	760, 965, 1368, 1539
BclI	TGATCA	1 cut(s)	739
BcoDI	GTCTC	2 cut(s)	1289, 1968
BcuI	ACTAGT	1 cut(s)	1321
BfaI	CTAG	4 cut(s)	1322, 1655, 1908, 2246
BfmI	CTRYAG	3 cut(s)	817, 1230, 2061
BfoI	RGCGCY	1 cut(s)	29
BfuAI	ACCTGC	1 cut(s)	2121
BglII	AGATCT	1 cut(s)	1644
BmcAI	AGTACT	2 cut(s)	1320, 2361
Bme1390I	CCNGG	4 cut(s)	760, 965, 1368, 1539
Bme18I	GGWCC	6 cut(s)	414, 650, 1650, 2005, 2228, 2249
BmeRI	GACNNNNNGTC	1 cut(s)	1207
BmgBI	CACGTC	1 cut(s)	1556
BmgT120I	GGNCC	8 cut(s)	414, 650, 1650, 2005, 2228, 2249, 2461, 2462
BmiI	GGNNCC	6 cut(s)	70, 651, 652, 1373, 1652, 2463
BmrFI	CCNGG	4 cut(s)	760, 965, 1368, 1539
BpiI	GAAGAC	1 cut(s)	2053
BpmI	CTGGAG	1 cut(s)	1761
Bpu10I	CCTNAGC	1 cut(s)	2369
Bpu14I	TTCGAA	1 cut(s)	2480
BpuEI	CTTGAG	2 cut(s)	20, 521
BsaAI	YACGTR	2 cut(s)	481, 878
BsaBI	GATNNNNATC	1 cut(s)	1362
BsaHI	GRCGYC	2 cut(s)	249, 1282
BsaJI	CCNNGG	6 cut(s)	62, 759, 964, 1367, 1538, 2097
BsaWI	WCCGGW	1 cut(s)	223
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 1853, 1883
Bsc4I	CCNNNNNNNGG	4 cut(s)	578, 1294, 1367, 2089
Bse1I	ACTGG	6 cut(s)	340, 673, 897, 1059, 1867, 2357
Bse21I	CCTNAGG	1 cut(s)	840
Bse3DI	GCAATG	1 cut(s)	2094
Bse8I	GATNNNNATC	1 cut(s)	1362
BseAI	TCCGGA	1 cut(s)	223
BseBI	CCWGG	4 cut(s)	760, 965, 1368, 1539
BseDI	CCNNGG	6 cut(s)	62, 759, 964, 1367, 1538, 2097
BseGI	GGATG	8 cut(s)	163, 769, 901, 1363, 1496, 1531, 2093, 2166
BseJI	GATNNNNATC	1 cut(s)	1362
BseLI	CCNNNNNNNGG	4 cut(s)	578, 1294, 1367, 2089
BseMI	GCAATG	1 cut(s)	2094
BseMII	CTCAG	8 cut(s)	720, 798, 822, 831, 1824, 2033, 2311, 2360
BseNI	ACTGG	6 cut(s)	340, 673, 897, 1059, 1867, 2357
BseRI	GAGGAG	1 cut(s)	1322
BseSI	GKGCMC	3 cut(s)	135, 877, 2465
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	8 cut(s)	7, 514, 720, 857, 1060, 1756, 1801, 1981
BseYI	CCCAGC	1 cut(s)	717
Bsh1236I	CGCG	2 cut(s)	304, 945
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	7 cut(s)	61, 239, 310, 475, 672, 1419, 2463
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	1 cut(s)	877
BsiSI	CCGG	2 cut(s)	224, 296
BslFI	GGGAC	5 cut(s)	123, 636, 661, 1555, 1636
BslI	CCNNNNNNNGG	4 cut(s)	578, 1294, 1367, 2089
BsmAI	GTCTC	2 cut(s)	1289, 1968
BsmBI	CGTCTC	1 cut(s)	1289
BsmFI	GGGAC	5 cut(s)	123, 636, 661, 1555, 1636
BsmI	GAATGC	1 cut(s)	1834
BsnI	GGCC	7 cut(s)	61, 239, 310, 475, 672, 1419, 2463
Bsp119I	TTCGAA	1 cut(s)	2480
Bsp120I	GGGCCC	1 cut(s)	2461
Bsp1286I	GDGCHC	3 cut(s)	135, 877, 2465
Bsp13I	TCCGGA	1 cut(s)	223
BspANI	GGCC	7 cut(s)	61, 239, 310, 475, 672, 1419, 2463
BspCNI	CTCAG	8 cut(s)	721, 799, 823, 832, 1823, 2034, 2310, 2361
BspEI	TCCGGA	1 cut(s)	223
BspFNI	CGCG	2 cut(s)	304, 945
BspHI	TCATGA	2 cut(s)	883, 1954
BspLI	GGNNCC	6 cut(s)	70, 651, 652, 1373, 1652, 2463
BspMAI	CTGCAG	1 cut(s)	2065
BspMI	ACCTGC	1 cut(s)	2121
BspPI	GGATC	8 cut(s)	366, 434, 560, 805, 1352, 1575, 2074, 2488
BspT104I	TTCGAA	1 cut(s)	2480
BsrDI	GCAATG	1 cut(s)	2094
BsrI	ACTGG	6 cut(s)	340, 673, 897, 1059, 1867, 2357
BssECI	CCNNGG	6 cut(s)	62, 759, 964, 1367, 1538, 2097
BssNI	GRCGYC	2 cut(s)	249, 1282
BssT1I	CCWWGG	1 cut(s)	2097
Bst2UI	CCWGG	4 cut(s)	760, 965, 1368, 1539
Bst4CI	ACNGT	3 cut(s)	872, 2194, 2487
Bst6I	CTCTTC	1 cut(s)	219
BstACI	GRCGYC	2 cut(s)	249, 1282
BstBAI	YACGTR	2 cut(s)	481, 878
BstBI	TTCGAA	1 cut(s)	2480
BstC8I	GCNNGC	6 cut(s)	99, 473, 1353, 1421, 1461, 1679
BstF5I	GGATG	8 cut(s)	163, 769, 901, 1363, 1496, 1531, 2093, 2166
BstFNI	CGCG	2 cut(s)	304, 945
BstH2I	RGCGCY	1 cut(s)	29
BstHHI	GCGC	4 cut(s)	28, 304, 945, 1904
BstMAI	GTCTC	2 cut(s)	1289, 1968
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	4 cut(s)	760, 965, 1368, 1539
BstNSI	RCATGY	2 cut(s)	1355, 1681
BstSCI	CCNGG	4 cut(s)	758, 963, 1366, 1537
BstSFI	CTRYAG	3 cut(s)	817, 1230, 2061
BstSLI	GKGCMC	3 cut(s)	135, 877, 2465
BstUI	CGCG	2 cut(s)	304, 945
BstV1I	GCAGC	8 cut(s)	7, 514, 720, 857, 1060, 1756, 1801, 1981
BstV2I	GAAGAC	1 cut(s)	2053
BstX2I	RGATCY	4 cut(s)	358, 797, 1567, 1644
BstXI	CCANNNNNNTGG	2 cut(s)	766, 1093
BstYI	RGATCY	4 cut(s)	358, 797, 1567, 1644
BstZI	CGGCCG	1 cut(s)	59
Bsu36I	CCTNAGG	1 cut(s)	840
BsuRI	GGCC	7 cut(s)	61, 239, 310, 475, 672, 1419, 2463
BtgZI	GCGATG	1 cut(s)	785
BtrI	CACGTC	1 cut(s)	1556
BtsCI	GGATG	8 cut(s)	163, 769, 901, 1363, 1496, 1531, 2093, 2166
BtsIMutI	CAGTG	2 cut(s)	333, 1874
BveI	ACCTGC	1 cut(s)	2121
Cac8I	GCNNGC	6 cut(s)	99, 473, 1353, 1421, 1461, 1679
CciI	TCATGA	2 cut(s)	883, 1954
CfoI	GCGC	4 cut(s)	28, 304, 945, 1904
Cfr13I	GGNCC	8 cut(s)	414, 650, 1650, 2005, 2228, 2249, 2461, 2462
CseI	GACGC	2 cut(s)	917, 1271
Csp6I	GTAC	4 cut(s)	85, 879, 1319, 2360
CspCI	CAANNNNNGTGG	2 cut(s)	2108, 2143
CviAII	CATG	8 cut(s)	352, 737, 884, 1120, 1352, 1678, 1955, 2499
CviQI	GTAC	4 cut(s)	85, 879, 1319, 2360
DriI	GACNNNNNGTC	1 cut(s)	1207
EaeI	YGGCCR	2 cut(s)	59, 670
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	1 cut(s)	219
Eam1105I	GACNNNNNGTC	1 cut(s)	1207
EarI	CTCTTC	1 cut(s)	219
EciI	GGCGGA	3 cut(s)	371, 1001, 2105
EclXI	CGGCCG	1 cut(s)	59
Eco130I	CCWWGG	1 cut(s)	2097
Eco147I	AGGCCT	1 cut(s)	475
Eco24I	GRGCYC	1 cut(s)	2465
Eco32I	GATATC	1 cut(s)	2469
Eco47I	GGWCC	6 cut(s)	414, 650, 1650, 2005, 2228, 2249
Eco52I	CGGCCG	1 cut(s)	59
Eco57I	CTGAAG	4 cut(s)	450, 1374, 2030, 2469
Eco81I	CCTNAGG	1 cut(s)	840
EcoO109I	RGGNCCY	1 cut(s)	650
EcoRI	GAATTC	3 cut(s)	329, 537, 1595
EcoRII	CCWGG	4 cut(s)	758, 963, 1366, 1537
EcoRV	GATATC	1 cut(s)	2469
EcoT14I	CCWWGG	1 cut(s)	2097
EcoT38I	GRGCYC	1 cut(s)	2465
ErhI	CCWWGG	1 cut(s)	2097
Esp3I	CGTCTC	1 cut(s)	1289
FaeI	CATG	8 cut(s)	355, 740, 887, 1123, 1355, 1681, 1958, 2502
FaqI	GGGAC	5 cut(s)	123, 636, 661, 1555, 1636
FatI	CATG	8 cut(s)	351, 736, 883, 1119, 1351, 1677, 1954, 2498
FauI	CCCGC	1 cut(s)	2172
FauNDI	CATATG	1 cut(s)	379
FbaI	TGATCA	1 cut(s)	739
FblI	GTMKAC	1 cut(s)	867
FokI	GGATG	8 cut(s)	170, 776, 908, 1350, 1483, 1538, 2080, 2173
FriOI	GRGCYC	1 cut(s)	2465
FspBI	CTAG	4 cut(s)	1322, 1655, 1908, 2246
GlaI	GCGC	4 cut(s)	27, 303, 944, 1903
GsaI	CCCAGC	1 cut(s)	721
GsuI	CTGGAG	1 cut(s)	1761
HaeII	RGCGCY	1 cut(s)	29
HaeIII	GGCC	7 cut(s)	61, 239, 310, 475, 672, 1419, 2463
HapII	CCGG	2 cut(s)	224, 296
HgaI	GACGC	2 cut(s)	917, 1271
HhaI	GCGC	4 cut(s)	28, 304, 945, 1904
Hin1I	GRCGYC	2 cut(s)	249, 1282
Hin1II	CATG	8 cut(s)	355, 740, 887, 1123, 1355, 1681, 1958, 2502
Hin6I	GCGC	4 cut(s)	26, 302, 943, 1902
HinP1I	GCGC	4 cut(s)	26, 302, 943, 1902
HindIII	AAGCTT	4 cut(s)	595, 1877, 2012, 2451
HinfI	GANTC	6 cut(s)	211, 220, 809, 1192, 1271, 2049
HpaII	CCGG	2 cut(s)	224, 296
HphI	GGTGA	5 cut(s)	478, 593, 1016, 1199, 1994
Hpy166II	GTNNAC	4 cut(s)	868, 875, 1474, 2228
Hpy8I	GTNNAC	4 cut(s)	868, 875, 1474, 2228
HpyAV	CCTTC	4 cut(s)	327, 1669, 1718, 2452
HpyCH4III	ACNGT	3 cut(s)	872, 2194, 2487
HpyCH4IV	ACGT	9 cut(s)	83, 249, 480, 877, 916, 1378, 1555, 1705, 2171
HpySE526I	ACGT	9 cut(s)	83, 249, 480, 877, 916, 1378, 1555, 1705, 2171
Hsp92I	GRCGYC	2 cut(s)	249, 1282
Hsp92II	CATG	8 cut(s)	355, 740, 887, 1123, 1355, 1681, 1958, 2502
HspAI	GCGC	4 cut(s)	26, 302, 943, 1902
KflI	GGGWCCC	1 cut(s)	650
Kpn2I	TCCGGA	1 cut(s)	223
Ksp22I	TGATCA	1 cut(s)	739
LmnI	GCTCC	3 cut(s)	68, 1335, 2069
Lsp1109I	GCAGC	8 cut(s)	7, 514, 720, 857, 1060, 1756, 1801, 1981
MaeI	CTAG	4 cut(s)	1322, 1655, 1908, 2246
MaeII	ACGT	9 cut(s)	83, 249, 480, 877, 916, 1378, 1555, 1705, 2171
MaeIII	GTNAC	5 cut(s)	263, 484, 810, 1379, 1558
MboII	GAAGA	9 cut(s)	206, 284, 797, 800, 950, 1209, 1380, 2058, 2247
MflI	RGATCY	4 cut(s)	358, 797, 1567, 1644
MhlI	GDGCHC	3 cut(s)	135, 877, 2465
MlsI	TGGCCA	1 cut(s)	672
MluNI	TGGCCA	1 cut(s)	672
MlyI	GAGTC	4 cut(s)	205, 818, 1201, 2043
MmeI	TCCRAC	3 cut(s)	1027, 1220, 2360
Mox20I	TGGCCA	1 cut(s)	672
MroI	TCCGGA	1 cut(s)	223
MscI	TGGCCA	1 cut(s)	672
MseI	TTAA	6 cut(s)	626, 906, 1148, 1755, 1848, 1892
MslI	CAYNNNNRTG	2 cut(s)	1124, 1449
Msp20I	TGGCCA	1 cut(s)	672
MspA1I	CMGCKG	2 cut(s)	848, 1814
MspI	CCGG	2 cut(s)	224, 296
MspR9I	CCNGG	4 cut(s)	760, 965, 1368, 1539
Mva1269I	GAATGC	1 cut(s)	1834
MvaI	CCWGG	4 cut(s)	760, 965, 1368, 1539
MvnI	CGCG	2 cut(s)	304, 945
NdeI	CATATG	1 cut(s)	379
NlaIII	CATG	8 cut(s)	355, 740, 887, 1123, 1355, 1681, 1958, 2502
NlaIV	GGNNCC	6 cut(s)	70, 651, 652, 1373, 1652, 2463
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	2 cut(s)	484, 810
NspI	RCATGY	2 cut(s)	1355, 1681
NspV	TTCGAA	1 cut(s)	2480
PaeI	GCATGC	2 cut(s)	1355, 1681
PagI	TCATGA	2 cut(s)	883, 1954
PceI	AGGCCT	1 cut(s)	475
PcsI	WCGNNNNNNNCGW	1 cut(s)	249
PctI	GAATGC	1 cut(s)	1834
PfeI	GAWTC	2 cut(s)	220, 1271
PflFI	GACNNNGTC	1 cut(s)	248
PflMI	CCANNNNNTGG	2 cut(s)	1367, 2089
PleI	GAGTC	4 cut(s)	205, 817, 1200, 2043
PpsI	GAGTC	4 cut(s)	205, 817, 1200, 2043
Ppu21I	YACGTR	2 cut(s)	481, 878
PpuMI	RGGWCCY	1 cut(s)	650
Psp1406I	AACGTT	1 cut(s)	2171
Psp5II	RGGWCCY	1 cut(s)	650
Psp6I	CCWGG	4 cut(s)	758, 963, 1366, 1537
PspFI	CCCAGC	1 cut(s)	717
PspGI	CCWGG	4 cut(s)	758, 963, 1366, 1537
PspN4I	GGNNCC	6 cut(s)	70, 651, 652, 1373, 1652, 2463
PspOMI	GGGCCC	1 cut(s)	2461
PspPI	GGNCC	8 cut(s)	414, 650, 1650, 2005, 2228, 2249, 2461, 2462
PspPPI	RGGWCCY	1 cut(s)	650
PsrI	GAACNNNNNNTAC	2 cut(s)	1364, 1396
PstI	CTGCAG	1 cut(s)	2065
PsuI	RGATCY	4 cut(s)	358, 797, 1567, 1644
PsyI	GACNNNGTC	1 cut(s)	248
PvuII	CAGCTG	1 cut(s)	1814
RsaI	GTAC	4 cut(s)	86, 880, 1320, 2361
RsaNI	GTAC	4 cut(s)	85, 879, 1319, 2360
RseI	CAYNNNNRTG	2 cut(s)	1124, 1449
SaqAI	TTAA	6 cut(s)	626, 906, 1148, 1755, 1848, 1892
Sau96I	GGNCC	8 cut(s)	414, 650, 1650, 2005, 2228, 2249, 2461, 2462
ScaI	AGTACT	2 cut(s)	1320, 2361
SchI	GAGTC	4 cut(s)	205, 818, 1201, 2043
ScrFI	CCNGG	4 cut(s)	760, 965, 1368, 1539
SduI	GDGCHC	3 cut(s)	135, 877, 2465
SfcI	CTRYAG	3 cut(s)	817, 1230, 2061
SfuI	TTCGAA	1 cut(s)	2480
SinI	GGWCC	6 cut(s)	414, 650, 1650, 2005, 2228, 2249
SmiMI	CAYNNNNRTG	2 cut(s)	1124, 1449
SmlI	CTYRAG	2 cut(s)	35, 500
SmoI	CTYRAG	2 cut(s)	35, 500
SpeI	ACTAGT	1 cut(s)	1321
SphI	GCATGC	2 cut(s)	1355, 1681
SseBI	AGGCCT	1 cut(s)	475
SspI	AATATT	1 cut(s)	613
SspMI	CTAG	4 cut(s)	1322, 1655, 1908, 2246
StuI	AGGCCT	1 cut(s)	475
StyD4I	CCNGG	4 cut(s)	758, 963, 1366, 1537
StyI	CCWWGG	1 cut(s)	2097
TaaI	ACNGT	3 cut(s)	872, 2194, 2487
TaiI	ACGT	9 cut(s)	86, 252, 483, 880, 919, 1381, 1558, 1708, 2174
TaqI	TCGA	7 cut(s)	243, 270, 342, 1335, 1944, 2305, 2480
TaqII	GACCGA	1 cut(s)	128
TatI	WGTACW	2 cut(s)	1318, 2359
TauI	GCSGC	5 cut(s)	14, 20, 26, 424, 851
TfiI	GAWTC	2 cut(s)	220, 1271
Tru1I	TTAA	6 cut(s)	626, 906, 1148, 1755, 1848, 1892
Tru9I	TTAA	6 cut(s)	626, 906, 1148, 1755, 1848, 1892
TscAI	CASTG	2 cut(s)	340, 1874
TseFI	GTSAC	2 cut(s)	484, 810
TseI	GCWGC	9 cut(s)	14, 20, 527, 733, 845, 1073, 1769, 1814, 1994
Tsp45I	GTSAC	2 cut(s)	484, 810
TspDTI	ATGAA	7 cut(s)	340, 606, 788, 1091, 1108, 2064, 2186
TspRI	CASTG	2 cut(s)	340, 1874
Tth111I	GACNNNGTC	1 cut(s)	248
Van91I	CCANNNNNTGG	2 cut(s)	1367, 2089
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	6 cut(s)	414, 650, 1650, 2005, 2228, 2249
XapI	RAATTY	6 cut(s)	329, 537, 711, 1595, 1750, 1827
XceI	RCATGY	2 cut(s)	1355, 1681
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1148, 1481
XmiI	GTMKAC	1 cut(s)	867
XspI	CTAG	4 cut(s)	1322, 1655, 1908, 2246
ZraI	GACGTC	1 cut(s)	250
ZrmI	AGTACT	2 cut(s)	1320, 2361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.