AT2G39480

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0005782
Physical Location & Seq
Reverse (-)
16477792 .. 16485039
7248 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G39480.2

Sequence Viewer

Length: 4224 bp
ATGATGATTTCGAGAGGTTTGTTTGGTTGGTCTCCGCCGCATATACAACCGTTAACTCCTGTTTCTGAAGTTTCCGAGCCTCCTGAGTCTCCATCTCCTTACCTTGATCCTGGTGCTGAGCACGGTGGTACAGGAACAGCGGCGCAAGCGGATGATGAGGAGGAAATGGAGGAGCCGGAGGAGATGGAGCCTCCTCCTGCTGCTGTTCCTTTCTCTCAGCTATTTGCTTGTGCTGATCGCTTTGATTGGGTTCTTATGGTTTTTGGATCCGTTGCTGCTGCTGCTCATGGTACTGCGCTTATTGTTTACTTGCACTACTTCGCCAAAATTGTTCAGGTTCTTGCATTTCCCACTGATTCGGATCATCTGATAAGTGATGATCAGTTCAATCGTCTCCTCGAGCTTTCGCTGACCATTGTATATATCGCTGGAGGTGTTTTCATATCTGGTTGGATTGAGGTGTCTTGCTGGATACTGACTGGAGAGAGGCAGACTGCTGTGATCAGGTCAAAGTACGTCCAAGTGCTACTAAATCAGGATATGAGTTTCTTTGATACATATGGGAATAACGGGGATATAGTAAGCCAAGTACTGAGTGATGTTCTACTTATTCAGTCGGCTCTAAGTGAAAAAGTTGGGAATTACATTCATAACATGGCGACATTTATCAGTGGTCTTATTATTGGTTTTGTCAACTGCTGGGAAATTGCCCTCATTACGTTAGCCACCGGTCCTTTCATTGTTGCTGCTGGAGGCATATCAAATATATTTCTCCACAGACTTGCTGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTCTCTTATGTTAGGACTTTGTATGCCTTTACAAATGAAACTCTTGCAAAATACTCTTATGCAACTTCTCTCCAAGCAACTCTGAGATATGGTATATTGATTAGTCTTGTGCAAGGACTTGGACTTGGATTTACTTATGGGCTTGCTATATGTTCATGTGCTATGCAACTTTGGATTGGTCGGTTCTTTGTTATTCATCATAGAGCAAATGGTGGAGAGATCATAACAGCCCTTTTTGCTGTTATTTTAAGTGGGCTGGGTTTAAATCAAGCGGCTACAAACTTTTATTCATTTGATCAAGGAAGAATTGCGGCGTATAGGCTTTTTGAGATGATAAGTCGTTCATCCTCTGGGACTAATCAAGAGGGAATTATTTTGTCTGCTGTCCAAGGAAATATTGAGTTTCGGAATGTATATTTCAGCTATTTGTCACGACCTGAAATTCCAATCTTGAGTGGATTTTACCTTACTGTGCCGGCTAAAAAAGCTGTTGCACTTGTTGGTAGAAATGGTTCTGGAAAAAGCAGTATCATTCCTCTAATGGAACGGTTTTATGATCCTACACTAGGAGAAGTTCTACTTGATGGAGAAAATATTAAAAATCTAAAATTAGAGTGGCTGAGAAGCCAAATAGGCCTGGTGACACAGGAGCCTGCTTTGCTTAGTCTGAGCATAAGAGAGAATATTGCATACGGCCGAGATGCTACTCTGGATCAGATAGAGGAAGCAGCTAAAAAAGCACATGCACACACATTTATCAGCTCACTTGAAAAAGGATATGAAACTCAGGTTGGAAAGACTGGTTTAACGTTGACAGAGGAGCAGAAAATAAAGCTATCGATTGCTAGAGCCGTACTCTTAGATCCAACAATTCTTTTGCTTGACGAGGTCACTGGAGGACTAGACTTTGAAGCTGAAAGAGTTGTCCAAGAAGCCCTTGATCTTCTAATGTTAGGAAGGTCTACCATAATAATAGCCCGACGACTAAGTCTGATAAGAAATGCTGACTATATTGCTGTAATGGAGGAGGGCCAGCTACTTGAAATGGGTACGCATGATGAACTAATCAACCTTGGTAATTTGTATGCTGAGCTTCTGAAGTGTGAAGAAGCAACAAAGCTACCCAGACGGATGCCAGTTAGGAACTACAACGATTCTGCTGCGTTTCAGGCTGAGAGGGATTCTTCAGCTGGTCGTGGCTTCCAAGAACCATCATCGCCCAAAATGGCTAAGTCTCCATCTCTTCAGAGAGGTCATAATGTTTTCCGCTCCCAGGAATTGTGCTTTAATAGTGAAGAATCGCCCAATGATCATAGCCCTGCACCAGAGAAACTGGGAGAAAATGGCTCGTCGTTGGATGTTGGTGAGAAGGAACCCACCATCAAAAGACAAGATAGTTTCGAGATGCGGTTACCAGAATTACCAAAAATTGACATTCAGTGTCCACAACGTCAGAAATCAAATGGTTCAGATCCGGAGTCCCCTATATCACCCCTTTTGATATCAGATCCCCAAAATGAGCGCTCTCATTCACAGACTTTTAGCCGCCCTCTTGGTCACTCAGATGACACTTCAGCAAGTGTTAAGGTGGCCAAGGACGGTCAACACAAGGAGCCACCTTCATTTTGGAGGTTGGCACAGCTTAGTTTTCCAGAGTGGCTATACGCTGTATTAGGGAGTATTGGTGCTGCAATCTTTGGTTCTTTCAATCCTCTTCTAGCTTATGTTATTGCATTAGTAGTGACGACATACTATACGAGCAAGGGAAGCCACCTGCGTGAAGAGGTTGACAAGTGGTGTTTGATCATTGCCTGCATGGGAATAGTGACAGTTGTTGCCAATTTCTTACAGCACTTCTACTTTGGTATTATGGGGGAGAAAATGACTGAGAGAGTGCGGCGAATGATGTTCTCAGCAATGCTGCGTAATGAAGTTGGATGGTATGACGAAGAAGAGAACAGTCCAGATACATTATCCATGCGCCTAGCAAATGATGCCACTTTTGTCCGAGCTGCCTTCAGCAACAGGCTTTCCATATTTATTCAGGATAGTTTTGCTGTTATCGTTGCCATTCTTATTGGGCTGCTGCTCGGTTGGCGTTTGGCCCTTGTTGCATTAGCGACTTTGCCAGTACTTACTCTTTCTGCCATTGCCCAGAAACTTTGGCTTGCTGGATTCTCAAAGGGCATCCAGGAGATGCATCGAAAGGCGTCCTTAGTACTCGAGGATGCTGTCAGAAACATATATACTGTTGTCGCGTTCTGTGCCGGCAACAAGGTGATGGAACTCTACAGACTGCAACTCCAACGGATACTCAGGCAGAGCTTTTTCCATGGGATGGCTATTGGCTTTGCGTTTGGCTTCTCACAGTTTCTTCTCTTCGCCTGTAATGCGCTCCTCCTGTGGTACACCGCGTTATCAGTAGACCGCAGATATATGAAATTGTCTACAGCTCTAACCGAGTACATGGTCTTCTCCTTTGCTACATTTGCTCTTGTGGAGCCATTCGGATTAGCACCTTACATTCTCAAGCGCCGTAGATCTCTCGCTTCAGTTTTTGAAATAATAGATCGAGTTCCTACAATCGAACCTGATGATACCTCGGCTCTTAGTCCGCCTAACGTGTATGGAAGCATTGAACTGAAAAACATCGACTTCTGCTACCCAACCCGCCCGGAAGTGTTAGTACTAAGCAACTTCAGTCTCAAAGTCAATGGCGGACAAACAGTAGCTGTGGTTGGTGTTTCTGGTTCTGGAAAGAGCACAATAATATCGTTGATCGAGAGATACTACGACCCAGTTGCTGGTCAGGTCTTATTAGATGGGCGAGACTTGAAGTCATATAATTTGAGATGGTTAAGAAGCCATATGGGTCTGATTCAACAGGAACCCATAATCTTTTCCACAACGATCAGAGAAAACATTATATACGCAAGGCACAATGCAAGTGAAGCTGAGATGAAGGAAGCAGCAAGGATTGCAAATGCCCACCATTTCATCAGCAGCTTACCTCACGGATACGACACACATATCGGGATGAGAGGTGTTGAGCTTACCCAAGGACAAAAACAGAGAATCGCTATAGCTCGGGTAGTGCTGAAGAATGCTCCAATACTGTTGATTGACGAAGCGAGTTCATCTATCGAATCCGAGTCGAGCCGTGTTGTGCAGGAAGCTCTTGATACATTGATAATGGGGAACAAAACAACAATTCTGATAGCGCATAGAGTAGCGATGATGAGACATGTGGATAACATTGTGGTTCTCAATGGAGGCAAAATAGTAGAGGAAGGTACGCATGATTGTTTAGCGGGTAAAAACGGATTGTATGTCCGTTTAATGCAACCACATTTTGGCAAGAATCTACGGCGACATCAACTGATCTAA

Protein Analysis

1407

Amino Acids

155.87

Weight (kDa)

5.74

Isoelectric Point (pI)

50.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 1 - 182 8.9e-28 ABC transporter transmembrane region
ABC_tran PF00005 252 - 397 2.5e-23 ABC transporter
ABC_membrane PF00664 660 - 923 8.3e-40 ABC transporter transmembrane region
ABC_tran PF00005 996 - 1144 5.7e-29 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2619
AasI GACNNNNNNGTC 1 cut(s) 1824
Acc36I ACCTGC 1 cut(s) 2619
AccB7I CCANNNNNTGG 3 cut(s) 3175, 3641, 4190
AccBSI CCGCTC 1 cut(s) 2106
AccI GTMKAC 3 cut(s) 1799, 3261, 3284
AccII CGCG 2 cut(s) 3095, 3251
AccIII TCCGGA 1 cut(s) 2311
AclI AACGTT 1 cut(s) 1646
AclWI GGATC 9 cut(s) 101, 261, 274, 369, 1388, 1557, 1694, 2303, 2339
AcoI YGGCCR 2 cut(s) 1531, 2427
AcsI RAATTY 1 cut(s) 1278
AcyI GRCGYC 1 cut(s) 3047
AfeI AGCGCT 1 cut(s) 2360
AfiI CCNNNNNNNGG 5 cut(s) 1403, 2110, 3175, 3641, 4190
AflIII ACRYGT 2 cut(s) 3459, 4081
AgeI ACCGGT 1 cut(s) 728
AhdI GACNNNNNGTC 1 cut(s) 3673
AjnI CCWGG 4 cut(s) 109, 1473, 2109, 3027
AjuI GAANNNNNNNTTGG 2 cut(s) 1611, 1643
AleI CACNNNNGTG 1 cut(s) 2613
Alw21I GWGCWC 2 cut(s) 123, 3602
Alw26I GTCTC 8 cut(s) 36, 93, 398, 844, 2076, 3545, 3660, 4072
AlwI GGATC 9 cut(s) 101, 261, 274, 369, 1388, 1557, 1694, 2303, 2339
AlwNI CAGNNNCTG 2 cut(s) 3569, 3641
Ama87I CYCGRG 3 cut(s) 398, 3059, 3924
Aor13HI TCCGGA 1 cut(s) 2311
Aor51HI AGCGCT 1 cut(s) 2360
AoxI GGCC 5 cut(s) 1471, 1531, 1867, 2427, 2940
ApoI RAATTY 1 cut(s) 1278
AsiGI ACCGGT 1 cut(s) 728
Asp700I GAANNNNTTC 1 cut(s) 1348
AspLEI GCGC 7 cut(s) 145, 298, 2361, 2820, 3232, 3372, 4060
AspS9I GGNCC 3 cut(s) 731, 1867, 2941
AsuC2I CCSGG 1 cut(s) 3512
AsuHPI GGTGA 4 cut(s) 1489, 2213, 2319, 3127
AvaI CYCGRG 3 cut(s) 398, 3059, 3924
AvaII GGWCC 1 cut(s) 731
BalI TGGCCA 1 cut(s) 2429
BamHI GGATCC 1 cut(s) 266
BarI GAAGNNNNNNTAC 4 cut(s) 3293, 3325, 3507, 3539
BbsI GAAGAC 1 cut(s) 3301
Bbv12I GWGCWC 2 cut(s) 123, 3602
BceAI ACGGC 5 cut(s) 1546, 1673, 3357, 3981, 4220
BcgI CGANNNNNNTGC 4 cut(s) 1979, 2013, 3620, 3654
BciT130I CCWGG 4 cut(s) 111, 1475, 2111, 3029
BciVI GTATCC 3 cut(s) 465, 3141, 3848
BclI TGATCA 5 cut(s) 379, 501, 1132, 2146, 2640
BcnI CCSGG 1 cut(s) 3512
BcoDI GTCTC 8 cut(s) 36, 93, 398, 844, 2076, 3545, 3660, 4072
BfaI CTAG 5 cut(s) 1403, 1683, 1739, 2555, 2822
BfmI CTRYAG 3 cut(s) 3127, 3285, 3918
BfoI RGCGCY 2 cut(s) 2362, 3373
BfuAI ACCTGC 1 cut(s) 2619
BfuI GTATCC 3 cut(s) 465, 3141, 3848
BglI GCCNNNNNGGC 1 cut(s) 1470
BglII AGATCT 1 cut(s) 3377
BlpI GCTNAGC 2 cut(s) 117, 1926
BmcAI AGTACT 4 cut(s) 591, 2970, 3057, 3525
Bme1390I CCNGG 5 cut(s) 111, 1475, 2111, 3029, 3512
Bme18I GGWCC 1 cut(s) 731
BmeRI GACNNNNNGTC 1 cut(s) 3673
BmeT110I CYCGRG 3 cut(s) 398, 3059, 3924
BmgT120I GGNCC 3 cut(s) 731, 1867, 2941
BmiI GGNNCC 8 cut(s) 174, 189, 268, 1488, 2211, 2451, 3339, 3726
BmrFI CCNGG 5 cut(s) 111, 1475, 2111, 3029, 3512
BmrI ACTGGG 2 cut(s) 2180, 3629
BmsI GCATC 9 cut(s) 790, 1528, 1959, 2232, 2821, 3024, 3033, 3046, 3055
BmuI ACTGGG 2 cut(s) 2180, 3629
BpiI GAAGAC 1 cut(s) 3301
BplI GAGNNNNNCTC 2 cut(s) 1677, 1709
BpmI CTGGAG 4 cut(s) 450, 501, 771, 1752
Bpu1102I GCTNAGC 2 cut(s) 117, 1926
BpuEI CTTGAG 2 cut(s) 1309, 3350
BpuMI CCSGG 1 cut(s) 3512
Bsa29I ATCGAT 1 cut(s) 1676
BsaBI GATNNNNATC 1 cut(s) 360
BsaHI GRCGYC 1 cut(s) 3047
BsaI GGTCTC 1 cut(s) 36
BsaJI CCNNGG 7 cut(s) 1225, 1909, 2109, 2430, 3169, 3438, 3895
BsaWI WCCGGW 2 cut(s) 728, 2311
BsaXI ACNNNNNCTCC 4 cut(s) 2506, 2536, 3123, 3153
Bsc4I CCNNNNNNNGG 5 cut(s) 1403, 2110, 3175, 3641, 4190
Bse118I RCCGGY 3 cut(s) 728, 1312, 3104
Bse1I ACTGG 7 cut(s) 484, 1642, 1735, 1973, 2175, 2966, 3635
Bse3DI GCAATG 4 cut(s) 822, 2643, 2760, 2985
Bse8I GATNNNNATC 1 cut(s) 360
BseAI TCCGGA 1 cut(s) 2311
BseBI CCWGG 4 cut(s) 111, 1475, 2111, 3029
BseCI ATCGAT 1 cut(s) 1676
BseDI CCNNGG 7 cut(s) 1225, 1909, 2109, 2430, 3169, 3438, 3895
BseGI GGATG 9 cut(s) 157, 1181, 1974, 2200, 2780, 3024, 3070, 3180, 3879
BseJI GATNNNNATC 1 cut(s) 360
BseLI CCNNNNNNNGG 5 cut(s) 1403, 2110, 3175, 3641, 4190
BseMI GCAATG 4 cut(s) 822, 2643, 2760, 2985
BseNI ACTGG 7 cut(s) 484, 1642, 1735, 1973, 2175, 2966, 3635
BseRI GAGGAG 8 cut(s) 173, 183, 185, 194, 386, 1670, 1877, 3224
BseX3I CGGCCG 1 cut(s) 1531
BseYI CCCAGC 2 cut(s) 699, 1093
BsgI GTGCAG 2 cut(s) 2142, 4025
Bsh1236I CGCG 2 cut(s) 3095, 3251
Bsh1285I CGRYCG 1 cut(s) 1534
BshFI GGCC 5 cut(s) 1473, 1533, 1869, 2429, 2942
BshTI ACCGGT 1 cut(s) 728
BshVI ATCGAT 1 cut(s) 1676
BsiEI CGRYCG 1 cut(s) 1534
BsiHKAI GWGCWC 2 cut(s) 123, 3602
BsiHKCI CYCGRG 3 cut(s) 398, 3059, 3924
BsiSI CCGG 6 cut(s) 176, 729, 1313, 2312, 3105, 3512
BslFI GGGAC 2 cut(s) 1204, 2302
BslI CCNNNNNNNGG 5 cut(s) 1403, 2110, 3175, 3641, 4190
BsmAI GTCTC 8 cut(s) 36, 93, 398, 844, 2076, 3545, 3660, 4072
BsmBI CGTCTC 1 cut(s) 398
BsmFI GGGAC 2 cut(s) 1204, 2302
BsmI GAATGC 1 cut(s) 3946
BsnI GGCC 5 cut(s) 1473, 1533, 1869, 2429, 2942
Bso31I GGTCTC 1 cut(s) 36
BsoBI CYCGRG 3 cut(s) 398, 3059, 3924
Bsp1286I GDGCHC 2 cut(s) 123, 3602
Bsp13I TCCGGA 1 cut(s) 2311
Bsp1720I GCTNAGC 2 cut(s) 117, 1926
Bsp19I CCATGG 1 cut(s) 3169
BspANI GGCC 5 cut(s) 1473, 1533, 1869, 2429, 2942
BspDI ATCGAT 1 cut(s) 1676
BspEI TCCGGA 1 cut(s) 2311
BspFNI CGCG 2 cut(s) 3095, 3251
BspLI GGNNCC 8 cut(s) 174, 189, 268, 1488, 2211, 2451, 3339, 3726
BspMI ACCTGC 1 cut(s) 2619
BspPI GGATC 9 cut(s) 101, 261, 274, 369, 1388, 1557, 1694, 2303, 2339
BspTNI GGTCTC 1 cut(s) 36
BsrBI CCGCTC 1 cut(s) 2106
BsrDI GCAATG 4 cut(s) 822, 2643, 2760, 2985
BsrFI RCCGGY 3 cut(s) 728, 1312, 3104
BsrI ACTGG 7 cut(s) 484, 1642, 1735, 1973, 2175, 2966, 3635
BssAI RCCGGY 3 cut(s) 728, 1312, 3104
BssECI CCNNGG 7 cut(s) 1225, 1909, 2109, 2430, 3169, 3438, 3895
BssNI GRCGYC 1 cut(s) 3047
BssT1I CCWWGG 5 cut(s) 1225, 1909, 2430, 3169, 3895
Bst2UI CCWGG 4 cut(s) 111, 1475, 2111, 3029
Bst6I CTCTTC 5 cut(s) 2085, 2556, 2613, 2784, 3221
BstACI GRCGYC 1 cut(s) 3047
BstAPI GCANNNNNTGC 2 cut(s) 2831, 3815
BstC8I GCNNGC 9 cut(s) 147, 820, 981, 1314, 1491, 1871, 2650, 3006, 3106
BstDSI CCRYGG 1 cut(s) 3169
BstEII GGTNACC 1 cut(s) 2247
BstENI CCTNNNNNAGG 1 cut(s) 1401
BstF5I GGATG 9 cut(s) 157, 1181, 1974, 2200, 2780, 3024, 3070, 3180, 3879
BstFNI CGCG 2 cut(s) 3095, 3251
BstH2I RGCGCY 2 cut(s) 2362, 3373
BstHHI GCGC 7 cut(s) 145, 298, 2361, 2820, 3232, 3372, 4060
BstMAI GTCTC 8 cut(s) 36, 93, 398, 844, 2076, 3545, 3660, 4072
BstMCI CGRYCG 1 cut(s) 1534
BstNI CCWGG 4 cut(s) 111, 1475, 2111, 3029
BstNSI RCATGY 2 cut(s) 1583, 4085
BstPI GGTNACC 1 cut(s) 2247
BstSCI CCNGG 5 cut(s) 109, 1473, 2109, 3027, 3510
BstSFI CTRYAG 3 cut(s) 3127, 3285, 3918
BstUI CGCG 2 cut(s) 3095, 3251
BstV2I GAAGAC 1 cut(s) 3301
BstX2I RGATCY 5 cut(s) 266, 1699, 2308, 2344, 3377
BstYI RGATCY 5 cut(s) 266, 1699, 2308, 2344, 3377
BstZI CGGCCG 1 cut(s) 1531
Bsu15I ATCGAT 1 cut(s) 1676
BsuI GTATCC 3 cut(s) 465, 3141, 3848
BsuRI GGCC 5 cut(s) 1473, 1533, 1869, 2429, 2942
BsuTUI ATCGAT 1 cut(s) 1676
BtgI CCRYGG 1 cut(s) 3169
BtgZI GCGATG 2 cut(s) 2037, 4085
BtsCI GGATG 9 cut(s) 157, 1181, 1974, 2200, 2780, 3024, 3070, 3180, 3879
BtsIMutI CAGTG 4 cut(s) 351, 676, 1728, 2282
BveI ACCTGC 1 cut(s) 2619
Cac8I GCNNGC 9 cut(s) 147, 820, 981, 1314, 1491, 1871, 2650, 3006, 3106
CaiI CAGNNNCTG 2 cut(s) 3569, 3641
CfoI GCGC 7 cut(s) 145, 298, 2361, 2820, 3232, 3372, 4060
Cfr10I RCCGGY 3 cut(s) 728, 1312, 3104
Cfr13I GGNCC 3 cut(s) 731, 1867, 2941
ClaI ATCGAT 1 cut(s) 1676
CseI GACGC 1 cut(s) 3036
CspAI ACCGGT 1 cut(s) 728
DraI TTTAAA 1 cut(s) 1101
DrdI GACNNNNNNGTC 1 cut(s) 1824
DriI GACNNNNNGTC 1 cut(s) 3673
DseDI GACNNNNNNGTC 1 cut(s) 1824
EaeI YGGCCR 2 cut(s) 1531, 2427
EagI CGGCCG 1 cut(s) 1531
Eam1104I CTCTTC 5 cut(s) 2085, 2556, 2613, 2784, 3221
Eam1105I GACNNNNNGTC 1 cut(s) 3673
EarI CTCTTC 5 cut(s) 2085, 2556, 2613, 2784, 3221
EciI GGCGGA 3 cut(s) 24, 3441, 3570
EclXI CGGCCG 1 cut(s) 1531
Eco130I CCWWGG 5 cut(s) 1225, 1909, 2430, 3169, 3895
Eco147I AGGCCT 1 cut(s) 1473
Eco31I GGTCTC 1 cut(s) 36
Eco32I GATATC 1 cut(s) 2340
Eco47I GGWCC 1 cut(s) 731
Eco47III AGCGCT 1 cut(s) 2360
Eco52I CGGCCG 1 cut(s) 1531
Eco88I CYCGRG 3 cut(s) 398, 3059, 3924
Eco91I GGTNACC 1 cut(s) 2247
EcoNI CCTNNNNNAGG 1 cut(s) 1401
EcoO65I GGTNACC 1 cut(s) 2247
EcoRII CCWGG 4 cut(s) 109, 1473, 2109, 3027
EcoRV GATATC 1 cut(s) 2340
EcoT14I CCWWGG 5 cut(s) 1225, 1909, 2430, 3169, 3895
EcoT22I ATGCAT 2 cut(s) 805, 3039
ErhI CCWWGG 5 cut(s) 1225, 1909, 2430, 3169, 3895
Esp3I CGTCTC 1 cut(s) 398
FalI AAGNNNNNCTT 6 cut(s) 1401, 1433, 1758, 1790, 3035, 3067
FaqI GGGAC 2 cut(s) 1204, 2302
FauI CCCGC 2 cut(s) 3515, 4141
FauNDI CATATG 3 cut(s) 559, 805, 3705
FbaI TGATCA 5 cut(s) 379, 501, 1132, 2146, 2640
FblI GTMKAC 3 cut(s) 1799, 3261, 3284
FokI GGATG 9 cut(s) 164, 1168, 1981, 2207, 2787, 3011, 3077, 3187, 3886
FspBI CTAG 5 cut(s) 1403, 1683, 1739, 2555, 2822
GlaI GCGC 7 cut(s) 144, 297, 2360, 2819, 3231, 3371, 4059
GsaI CCCAGC 2 cut(s) 703, 1097
GsuI CTGGAG 4 cut(s) 450, 501, 771, 1752
HaeII RGCGCY 2 cut(s) 2362, 3373
HaeIII GGCC 5 cut(s) 1473, 1533, 1869, 2429, 2942
HapII CCGG 6 cut(s) 176, 729, 1313, 2312, 3105, 3512
HgaI GACGC 1 cut(s) 3036
HhaI GCGC 7 cut(s) 145, 298, 2361, 2820, 3232, 3372, 4060
Hin1I GRCGYC 1 cut(s) 3047
Hin6I GCGC 7 cut(s) 143, 296, 2359, 2818, 3230, 3370, 4058
HinP1I GCGC 7 cut(s) 143, 296, 2359, 2818, 3230, 3370, 4058
HincII GTYRAC 5 cut(s) 54, 694, 1650, 2441, 2626
HindII GTYRAC 5 cut(s) 54, 694, 1650, 2441, 2626
HpaI GTTAAC 1 cut(s) 54
HpaII CCGG 6 cut(s) 176, 729, 1313, 2312, 3105, 3512
HphI GGTGA 4 cut(s) 1489, 2213, 2319, 3127
Hpy99I CGWCG 2 cut(s) 1821, 2191
HpyAV CCTTC 6 cut(s) 1788, 2200, 2466, 2863, 3793, 4121
HpyCH4IV ACGT 5 cut(s) 516, 719, 1646, 2287, 3459
HpySE526I ACGT 5 cut(s) 516, 719, 1646, 2287, 3459
Hsp92I GRCGYC 1 cut(s) 3047
HspAI GCGC 7 cut(s) 143, 296, 2359, 2818, 3230, 3370, 4058
Kpn2I TCCGGA 1 cut(s) 2311
KroI GCCGGC 2 cut(s) 1312, 3104
KroNI GCCGGC 2 cut(s) 1314, 3106
Ksp22I TGATCA 5 cut(s) 379, 501, 1132, 2146, 2640
KspAI GTTAAC 1 cut(s) 54
LmnI GCTCC 9 cut(s) 172, 187, 1486, 1657, 2111, 2449, 3237, 3337, 3949
LweI GCATC 9 cut(s) 790, 1528, 1959, 2232, 2821, 3024, 3033, 3046, 3055
MaeI CTAG 5 cut(s) 1403, 1683, 1739, 2555, 2822
MaeII ACGT 5 cut(s) 516, 719, 1646, 2287, 3459
MaeIII GTNAC 7 cut(s) 1266, 1477, 1726, 2247, 2393, 2578, 2662
MbiI CCGCTC 1 cut(s) 2106
MflI RGATCY 5 cut(s) 266, 1699, 2308, 2344, 3377
MhlI GDGCHC 2 cut(s) 123, 3602
MlsI TGGCCA 1 cut(s) 2429
MluNI TGGCCA 1 cut(s) 2429
MlyI GAGTC 3 cut(s) 95, 2324, 3998
MmeI TCCRAC 6 cut(s) 431, 1609, 1727, 2172, 2752, 3166
Mox20I TGGCCA 1 cut(s) 2429
Mph1103I ATGCAT 2 cut(s) 805, 3039
MroI TCCGGA 1 cut(s) 2311
MroNI GCCGGC 2 cut(s) 1312, 3104
MroXI GAANNNNTTC 1 cut(s) 1348
MscI TGGCCA 1 cut(s) 2429
MseI TTAA 9 cut(s) 53, 1085, 1100, 1434, 1643, 2124, 2421, 3695, 4175
MslI CAYNNNNRTG 2 cut(s) 2400, 2613
Msp20I TGGCCA 1 cut(s) 2429
MspA1I CMGCKG 2 cut(s) 140, 2027
MspI CCGG 6 cut(s) 176, 729, 1313, 2312, 3105, 3512
MspR9I CCNGG 5 cut(s) 111, 1475, 2111, 3029, 3512
Mva1269I GAATGC 1 cut(s) 3946
MvaI CCWGG 4 cut(s) 111, 1475, 2111, 3029
MvnI CGCG 2 cut(s) 3095, 3251
NaeI GCCGGC 2 cut(s) 1314, 3106
NciI CCSGG 1 cut(s) 3512
NcoI CCATGG 1 cut(s) 3169
NdeI CATATG 3 cut(s) 559, 805, 3705
NgoMIV GCCGGC 2 cut(s) 1312, 3104
NlaIV GGNNCC 8 cut(s) 174, 189, 268, 1488, 2211, 2451, 3339, 3726
NmeAIII GCCGAG 2 cut(s) 1559, 3419
NmuCI GTSAC 6 cut(s) 1266, 1477, 1726, 2393, 2578, 2662
NsiI ATGCAT 2 cut(s) 805, 3039
NspI RCATGY 2 cut(s) 1583, 4085
OliI CACNNNNGTG 1 cut(s) 2613
PaeR7I CTCGAG 2 cut(s) 398, 3059
PaqCI CACCTGC 1 cut(s) 2619
PceI AGGCCT 1 cut(s) 1473
PciI ACATGT 1 cut(s) 4081
PctI GAATGC 1 cut(s) 3946
PdiI GCCGGC 2 cut(s) 1314, 3106
PdmI GAANNNNTTC 1 cut(s) 1348
PfeI GAWTC 9 cut(s) 356, 1991, 2018, 2135, 3012, 3715, 3912, 3983, 4198
PflFI GACNNNGTC 2 cut(s) 1724, 1824
PflMI CCANNNNNTGG 3 cut(s) 3175, 3641, 4190
PfoI TCCNGGA 1 cut(s) 3027
PinAI ACCGGT 1 cut(s) 728
PleI GAGTC 3 cut(s) 94, 2323, 3997
PpsI GAGTC 3 cut(s) 94, 2323, 3997
PscI ACATGT 1 cut(s) 4081
Psp1406I AACGTT 1 cut(s) 1646
Psp6I CCWGG 4 cut(s) 109, 1473, 2109, 3027
PspEI GGTNACC 1 cut(s) 2247
PspFI CCCAGC 2 cut(s) 699, 1093
PspGI CCWGG 4 cut(s) 109, 1473, 2109, 3027
PspN4I GGNNCC 8 cut(s) 174, 189, 268, 1488, 2211, 2451, 3339, 3726
PspPI GGNCC 3 cut(s) 731, 1867, 2941
PspXI VCTCGAGB 2 cut(s) 398, 3059
PsrI GAACNNNNNNTAC 2 cut(s) 1333, 1365
PstNI CAGNNNCTG 2 cut(s) 3569, 3641
PsuI RGATCY 5 cut(s) 266, 1699, 2308, 2344, 3377
PsyI GACNNNGTC 2 cut(s) 1724, 1824
PvuII CAGCTG 1 cut(s) 2027
RseI CAYNNNNRTG 2 cut(s) 2400, 2613
SaqAI TTAA 9 cut(s) 53, 1085, 1100, 1434, 1643, 2124, 2421, 3695, 4175
Sau96I GGNCC 3 cut(s) 731, 1867, 2941
ScaI AGTACT 4 cut(s) 591, 2970, 3057, 3525
SchI GAGTC 3 cut(s) 95, 2324, 3998
ScrFI CCNGG 5 cut(s) 111, 1475, 2111, 3029, 3512
SduI GDGCHC 2 cut(s) 123, 3602
SfaNI GCATC 9 cut(s) 790, 1528, 1959, 2232, 2821, 3024, 3033, 3046, 3055
SfcI CTRYAG 3 cut(s) 3127, 3285, 3918
Sfr274I CTCGAG 2 cut(s) 398, 3059
SinI GGWCC 1 cut(s) 731
SlaI CTCGAG 2 cut(s) 398, 3059
SmiMI CAYNNNNRTG 2 cut(s) 2400, 2613
SmlI CTYRAG 4 cut(s) 398, 1288, 3059, 3365
SmoI CTYRAG 4 cut(s) 398, 1288, 3059, 3365
SseBI AGGCCT 1 cut(s) 1473
SspI AATATT 4 cut(s) 793, 1234, 1432, 1522
SspMI CTAG 5 cut(s) 1403, 1683, 1739, 2555, 2822
StuI AGGCCT 1 cut(s) 1473
StyD4I CCNGG 5 cut(s) 109, 1473, 2109, 3027, 3510
StyI CCWWGG 5 cut(s) 1225, 1909, 2430, 3169, 3895
TaiI ACGT 5 cut(s) 519, 722, 1649, 2290, 3462
TatI WGTACW 5 cut(s) 589, 2968, 3055, 3300, 3523
TauI GCSGC 6 cut(s) 40, 143, 1112, 1151, 2385, 2737
TfiI GAWTC 9 cut(s) 356, 1991, 2018, 2135, 3012, 3715, 3912, 3983, 4198
Tru1I TTAA 9 cut(s) 53, 1085, 1100, 1434, 1643, 2124, 2421, 3695, 4175
Tru9I TTAA 9 cut(s) 53, 1085, 1100, 1434, 1643, 2124, 2421, 3695, 4175
TscAI CASTG 4 cut(s) 358, 676, 1735, 2282
TseFI GTSAC 6 cut(s) 1266, 1477, 1726, 2393, 2578, 2662
Tsp45I GTSAC 6 cut(s) 1266, 1477, 1726, 2393, 2578, 2662
TspGWI ACGGA 6 cut(s) 259, 1981, 3160, 3867, 4160, 4173
TspRI CASTG 4 cut(s) 358, 676, 1735, 2282
Tth111I GACNNNGTC 2 cut(s) 1724, 1824
Van91I CCANNNNNTGG 3 cut(s) 3175, 3641, 4190
VpaK11BI GGWCC 1 cut(s) 731
XagI CCTNNNNNAGG 1 cut(s) 1401
XapI RAATTY 1 cut(s) 1278
XceI RCATGY 2 cut(s) 1583, 4085
XcmI CCANNNNNNNNNTGG 1 cut(s) 2460
XhoI CTCGAG 2 cut(s) 398, 3059
XmiI GTMKAC 3 cut(s) 1799, 3261, 3284
XmnI GAANNNNTTC 1 cut(s) 1348
XspI CTAG 5 cut(s) 1403, 1683, 1739, 2555, 2822
ZrmI AGTACT 4 cut(s) 591, 2970, 3057, 3525
Zsp2I ATGCAT 2 cut(s) 805, 3039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.