Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005782

Physical Location & Seq

Genomic Coordinates Forward (+)

44326313 .. 44334579

Gene Structure 8267 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0324000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGACAATTTCTCATCTGGGGAAGATTTGATCATTAAGGCAAGAAAGCCATATACTATTACCAAGCAGCGAGAGCGGTGGACTGAGGAGGAGCATAATAGGTTTCTTGAAGCCTTGAAGCTCTACGGGCGAGCATGGCAGCGCATTGAAGAACATATAGGAACAAAGACTGCTGTGCAGATCCGAAGTCATGCACAGAAGTTCTTTTCAAAGCTGGAGAAGGAGGCAGTCAGTAAAGGTGTTCCTGTAGGACAATCAATTGACATAGATATTCCGCCTCCGCGCCCTAAAAGGAAACCAAGCAATCCTTATCCTCGGAAGTCTAGTGAAGCTGCTCCAACATGGTCCACGTCGCATGTCGGAGCAGGGGATGGAAAACTTGTGTCATCAGCTTCTTCTTCACATTGTAAACAAGCAGTGGACTTGGAGAAAGGACCACTCGATGAGAGATCCAGTGGAGAAGAAAAGCCAAGTTATGGAAAAGAAAACAAAGATGAAAGTTGCTCAGAAGTCTTCACCTTACTCTCAGAGTCTCACTGCTCCTCTGTGTCTTCTGCAAACAAAAGTTCCATACCTGCACTCAGAAATGCTTGCACTTTTAGAGAGTTTGTGCCTTCAGTGAAAAAGGTAATCCCTCGAGATGGCAATGAATCTTATGTCACTATTGAACTTAAAGGAAATGAGAATTTGAAGAAAACTGATGCCAAAAAGATTGTTCAAGATAATGCCACAAGTGAAGCCTCAAAGTTGGAGAACACTAATGCTTTTAAGTTGGTTCAAGGTGAGAAAGCAGATGATTTGAATTGTTCATTGCCAACAGATGGGATGCGAAGTACTCCGGCCTGCCCGAGGAACGTTCCTATACACATACTGGATGGGAGCGTAGGAGAATGTAATCAAACTACAACCCCAGATTTGTCATTTTCATTCCAGGATTCTGTATTTCATCCTATGGGAAAGATTCGTGTACAGCCTAACCTGTTTACAAATCCAGCTGCATCTACTACTACTACTGAACATGAAAGTAATGTATCAAGATCTTGTATTGACCAATCATTTCCACCTATTCCACCTCCATTTACCCCATTCCACCACAATCAAGAGGACTACCACTCATCTCTTTCCTCCACATTTTCAAGTCTTATTGTGTCTTCTCTGCTACAAAACCCTGCAGCCCATGCTGCGGCTAGCTTTGCAGCCACATTCTGGCCTTACACAAATGCGGAGAACAAGGAAGGTTCTCCTGCATGCTCTGCCGGAGGTTTTCCATCTAGCCAAATGAACTCCCCTCCAAATATGGCAGCAATTGCTGCTGCCACTGTAGCTGCAGCAACTGCATGGTGGGCTGCCCATGGACTGCTCCCCTTGTGCGCTCCTCTTCAAACTAGCTTTAGCTGTCCTGTGCCCGTGCCCGTGCCCATGACTGGAGTTTCATCAATGGACAATGATCAAGCTCCTGCAGCCGAGACAGAGAAAGGACAGGATTCTCTTCAAGTTCCTTGCTTGCAGGATCAACTGCAGGACCCAGAACAGTCAGAAGCTGTGCAAGCACAACATTCACCTCCAAAATCACCAACCACAACCTCATCAGACTCTGAAAATGGAGGTGCAAAGCCTGATATTGGATCAAAAGCTGATGATAATGAGAAGGACCTAGCAACAACTGAAGTTCAAGATTCGAACAAAGCAAAGAGCAAAAAACAGGTGGACCGTTCTTCGTGTGGTTCAAACACAACTTCCTGCAGCGAAGTAGAGACGGATGCATTAGAGAAGCAAGAAAAAGGTGAGGAAGAACTAAAAGAACCCGACATAAACCCAGCTTCTGAGTCTAGTTATCACCGCACTAGAAGTATAAGCAACATGAGTGATTCTTGGAAAGAGAGACACATGAATGATTCATGGAAAGAAGTCTCTGAAGAGGGGCGAATGGCTTTTCAAGCATTATTCTCAAGAGAGGTATTGCCCCAGAGTTTTTCACCTCCACCTGACCTGAAGGATAAGGGGCATAAGGACACTATAGAAGGACAGCAAAATAGTGGTGAGAAAGACGGAAGATCTCTAATGTTAGACCTGAACAGCAAGGCCTGGGCACTATGTTGTCACCCAGATGGGGAGAAAATTGCATCACCACCAGGAGGGCTCAACGATGCAGGGGGGCTGTTGACATTAGGCCTGGGATATGGAAAGCTAAAGGCTCGTCGAACAGGATTCAAGCCTTACAAAAGGTGCTCTGTAGAGGCCAATGAGAACAGGGTGGCAAATGCCAGCAGCCATTGTGAAGAGAAAGGTCCCAAGAGGCTTCGCTTGGAAGGGGAAGCTTCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

775

Amino Acids

84.15

Weight (kDa)

5.77

Isoelectric Point (pI)

57.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	24 - 67	2.6e-13	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39480 AT2G39480 AT3G55320
fragaria_vesca	FvH4_7g21390 FvH4_7g21390 FvH4_7g21390 FvH4_7g21390 FvH4_7g21390 FvH4_7g21390 FvH4_7g21390
malus_domestica	MD01G1121400.v1.1 MD07G1191100.v1.1
prunus_persica	Prupe.2G229100_v2.0.a1 Prupe.2G229100_v2.0.a1
pyrus_communis	pycom01g14840 pycom07g18040
rosa_chinensis	RchiOBHm_Chr1g0365761
rosa_laevigata	RLG00000027402
rosa_multiflora	Rmu_sc0002093.1_g000033 Rmu_sc0004311.1_g000018
rosa_roxburghii	Rroxscaffold_4G00290920
rosa_rugosa	Rorug01G0323900 Rorug01G0324000 Rorug01G0324000
rosa_samantha	Rh1AG332700 Rh1BG293600 Rh1CG310500
rosa_wichuraiana	Rw1G029540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	583
AccB7I	CCANNNNNTGG	3 cut(s)	476, 821, 1206
AccBSI	CCGCTC	1 cut(s)	76
AccII	CGCG	1 cut(s)	283
AciI	CCGC	6 cut(s)	76, 275, 281, 1184, 1223, 1840
AclI	AACGTT	1 cut(s)	855
AclWI	GGATC	4 cut(s)	175, 444, 1518, 1633
AcsI	RAATTY	1 cut(s)	685
AcuI	CTGAAG	4 cut(s)	600, 1686, 1935, 2012
AfaI	GTAC	2 cut(s)	835, 969
AjiI	CACGTC	1 cut(s)	351
AjnI	CCWGG	4 cut(s)	930, 2084, 2131, 2172
Alw21I	GWGCWC	1 cut(s)	2231
Alw26I	GTCTC	5 cut(s)	537, 1460, 1748, 1876, 1915
AlwI	GGATC	4 cut(s)	175, 444, 1518, 1633
AlwNI	CAGNNNCTG	4 cut(s)	1334, 1541, 1595, 1823
Ama87I	CYCGRG	2 cut(s)	636, 847
AoxI	GGCC	5 cut(s)	840, 1208, 2082, 2170, 2238
ApoI	RAATTY	1 cut(s)	685
AspLEI	GCGC	3 cut(s)	144, 285, 1373
AspS9I	GGNCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
AsuII	TTCGAA	1 cut(s)	1679
AsuNHI	GCTAGC	1 cut(s)	1187
AvaI	CYCGRG	2 cut(s)	636, 847
AvaII	GGWCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
BaeGI	GKGCMC	4 cut(s)	1407, 1413, 1419, 2092
BanII	GRGCYC	1 cut(s)	2142
BbsI	GAAGAC	3 cut(s)	505, 543, 1143
Bbv12I	GWGCWC	1 cut(s)	2231
BccI	CCATC	6 cut(s)	365, 635, 815, 869, 1276, 2102
BciT130I	CCWGG	4 cut(s)	932, 2086, 2133, 2174
BclI	TGATCA	2 cut(s)	30, 1447
BcoDI	GTCTC	5 cut(s)	537, 1460, 1748, 1876, 1915
BfaI	CTAG	7 cut(s)	324, 1188, 1272, 1386, 1655, 1830, 1845
BfmI	CTRYAG	9 cut(s)	246, 1170, 1320, 1326, 1458, 1517, 1741, 2016, 2232
BfuAI	ACCTGC	1 cut(s)	583
BglII	AGATCT	2 cut(s)	1037, 2054
BmcAI	AGTACT	1 cut(s)	835
Bme1390I	CCNGG	4 cut(s)	932, 2086, 2133, 2174
Bme18I	GGWCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
BmeT110I	CYCGRG	2 cut(s)	636, 847
BmgBI	CACGTC	1 cut(s)	351
BmgT120I	GGNCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
BmiI	GGNNCC	2 cut(s)	1524, 2290
BmrFI	CCNGG	4 cut(s)	932, 2086, 2133, 2174
BmsI	GCATC	6 cut(s)	691, 816, 1007, 1750, 2132, 2137
BmtI	GCTAGC	1 cut(s)	1191
BpiI	GAAGAC	3 cut(s)	505, 543, 1143
BpmI	CTGGAG	2 cut(s)	236, 1446
Bpu14I	TTCGAA	1 cut(s)	1679
BpuEI	CTTGAG	1 cut(s)	1933
BsaJI	CCNNGG	5 cut(s)	314, 848, 1351, 2085, 2173
Bse1I	ACTGG	3 cut(s)	453, 876, 1429
Bse3DI	GCAATG	2 cut(s)	652, 809
BseBI	CCWGG	4 cut(s)	932, 2086, 2133, 2174
BseDI	CCNNGG	5 cut(s)	314, 848, 1351, 2085, 2173
BseGI	GGATG	5 cut(s)	376, 831, 880, 946, 1765
BseMI	GCAATG	2 cut(s)	652, 809
BseMII	CTCAG	5 cut(s)	75, 519, 540, 595, 1815
BseNI	ACTGG	3 cut(s)	453, 876, 1429
BseRI	GAGGAG	4 cut(s)	101, 104, 532, 1365
BseSI	GKGCMC	4 cut(s)	1407, 1413, 1419, 2092
BseYI	CCCAGC	1 cut(s)	1816
BsgI	GTGCAG	2 cut(s)	197, 561
Bsh1236I	CGCG	1 cut(s)	283
BshFI	GGCC	5 cut(s)	842, 1210, 2084, 2172, 2240
BsiHKAI	GWGCWC	1 cut(s)	2231
BsiHKCI	CYCGRG	2 cut(s)	636, 847
BsiSI	CCGG	2 cut(s)	839, 1257
BslFI	GGGAC	1 cut(s)	2274
BsmAI	GTCTC	5 cut(s)	537, 1460, 1748, 1876, 1915
BsmBI	CGTCTC	1 cut(s)	1748
BsmFI	GGGAC	1 cut(s)	2274
BsnI	GGCC	5 cut(s)	842, 1210, 2084, 2172, 2240
BsoBI	CYCGRG	2 cut(s)	636, 847
Bsp119I	TTCGAA	1 cut(s)	1679
Bsp1286I	GDGCHC	6 cut(s)	1407, 1413, 1419, 2092, 2142, 2231
Bsp1407I	TGTACA	1 cut(s)	967
Bsp143I	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
Bsp19I	CCATGG	1 cut(s)	1351
BspACI	CCGC	6 cut(s)	76, 275, 281, 1184, 1223, 1840
BspANI	GGCC	5 cut(s)	842, 1210, 2084, 2172, 2240
BspCNI	CTCAG	5 cut(s)	76, 518, 539, 594, 1816
BspFNI	CGCG	1 cut(s)	283
BspLI	GGNNCC	2 cut(s)	1524, 2290
BspMAI	CTGCAG	5 cut(s)	1174, 1330, 1462, 1521, 1745
BspMI	ACCTGC	1 cut(s)	583
BspOI	GCTAGC	1 cut(s)	1191
BspPI	GGATC	4 cut(s)	175, 444, 1518, 1633
BspT104I	TTCGAA	1 cut(s)	1679
BsrBI	CCGCTC	1 cut(s)	76
BsrDI	GCAATG	2 cut(s)	652, 809
BsrGI	TGTACA	1 cut(s)	967
BsrI	ACTGG	3 cut(s)	453, 876, 1429
BssECI	CCNNGG	5 cut(s)	314, 848, 1351, 2085, 2173
BssMI	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
BssT1I	CCWWGG	1 cut(s)	1351
Bst2UI	CCWGG	4 cut(s)	932, 2086, 2133, 2174
Bst4CI	ACNGT	3 cut(s)	1321, 1533, 1712
Bst6I	CTCTTC	4 cut(s)	1383, 1494, 1911, 2274
BstAPI	GCANNNNNTGC	5 cut(s)	1178, 1253, 1307, 1310, 1334
BstAUI	TGTACA	1 cut(s)	967
BstBI	TTCGAA	1 cut(s)	1679
BstC8I	GCNNGC	8 cut(s)	132, 592, 844, 1189, 1249, 1505, 1548, 2266
BstDEI	CTNAG	5 cut(s)	84, 505, 526, 581, 1824
BstDSI	CCRYGG	1 cut(s)	1351
BstENI	CCTNNNNNAGG	1 cut(s)	847
BstF5I	GGATG	5 cut(s)	376, 831, 880, 946, 1765
BstFNI	CGCG	1 cut(s)	283
BstHHI	GCGC	3 cut(s)	144, 285, 1373
BstKTI	GATC	8 cut(s)	33, 183, 452, 1040, 1450, 1513, 1628, 2057
BstMAI	GTCTC	5 cut(s)	537, 1460, 1748, 1876, 1915
BstMBI	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
BstNI	CCWGG	4 cut(s)	932, 2086, 2133, 2174
BstNSI	RCATGY	2 cut(s)	359, 1251
BstSCI	CCNGG	4 cut(s)	930, 2084, 2131, 2172
BstSFI	CTRYAG	9 cut(s)	246, 1170, 1320, 1326, 1458, 1517, 1741, 2016, 2232
BstSLI	GKGCMC	4 cut(s)	1407, 1413, 1419, 2092
BstUI	CGCG	1 cut(s)	283
BstV2I	GAAGAC	3 cut(s)	505, 543, 1143
BstX2I	RGATCY	4 cut(s)	180, 449, 1037, 2054
BstYI	RGATCY	4 cut(s)	180, 449, 1037, 2054
BsuRI	GGCC	5 cut(s)	842, 1210, 2084, 2172, 2240
BtgI	CCRYGG	1 cut(s)	1351
BtrI	CACGTC	1 cut(s)	351
BtsCI	GGATG	5 cut(s)	376, 831, 880, 946, 1765
BtsI	GCAGTG	2 cut(s)	423, 535
BtsIMutI	CAGTG	5 cut(s)	423, 460, 535, 624, 1317
BveI	ACCTGC	1 cut(s)	583
Cac8I	GCNNGC	8 cut(s)	132, 592, 844, 1189, 1249, 1505, 1548, 2266
CaiI	CAGNNNCTG	4 cut(s)	1334, 1541, 1595, 1823
CfoI	GCGC	3 cut(s)	144, 285, 1373
Cfr13I	GGNCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
Csp6I	GTAC	2 cut(s)	834, 968
CviQI	GTAC	2 cut(s)	834, 968
DdeI	CTNAG	5 cut(s)	84, 505, 526, 581, 1824
DpnI	GATC	8 cut(s)	32, 182, 451, 1039, 1449, 1512, 1627, 2056
DpnII	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
Eam1104I	CTCTTC	4 cut(s)	1383, 1494, 1911, 2274
EarI	CTCTTC	4 cut(s)	1383, 1494, 1911, 2274
EciI	GGCGGA	1 cut(s)	264
Eco130I	CCWWGG	1 cut(s)	1351
Eco147I	AGGCCT	2 cut(s)	2084, 2172
Eco24I	GRGCYC	1 cut(s)	2142
Eco47I	GGWCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
Eco57I	CTGAAG	4 cut(s)	600, 1686, 1935, 2012
Eco88I	CYCGRG	2 cut(s)	636, 847
EcoNI	CCTNNNNNAGG	1 cut(s)	847
EcoO109I	RGGNCCY	3 cut(s)	1522, 1651, 2288
EcoRII	CCWGG	4 cut(s)	930, 2084, 2131, 2172
EcoT14I	CCWWGG	1 cut(s)	1351
EcoT22I	ATGCAT	1 cut(s)	1765
EcoT38I	GRGCYC	1 cut(s)	2142
ErhI	CCWWGG	1 cut(s)	1351
Esp3I	CGTCTC	1 cut(s)	1748
FalI	AAGNNNNNCTT	2 cut(s)	292, 324
FaqI	GGGAC	1 cut(s)	2274
FbaI	TGATCA	2 cut(s)	30, 1447
FokI	GGATG	5 cut(s)	383, 838, 887, 933, 1772
FriOI	GRGCYC	1 cut(s)	2142
FspBI	CTAG	7 cut(s)	324, 1188, 1272, 1386, 1655, 1830, 1845
GlaI	GCGC	3 cut(s)	143, 284, 1372
GsaI	CCCAGC	1 cut(s)	1820
GsuI	CTGGAG	2 cut(s)	236, 1446
HaeIII	GGCC	5 cut(s)	842, 1210, 2084, 2172, 2240
HapII	CCGG	2 cut(s)	839, 1257
HhaI	GCGC	3 cut(s)	144, 285, 1373
Hin6I	GCGC	3 cut(s)	142, 283, 1371
HinP1I	GCGC	3 cut(s)	142, 283, 1371
HincII	GTYRAC	1 cut(s)	2163
HindII	GTYRAC	1 cut(s)	2163
HindIII	AAGCTT	1 cut(s)	2316
HpaII	CCGG	2 cut(s)	839, 1257
Hpy166II	GTNNAC	8 cut(s)	81, 348, 410, 421, 968, 984, 1708, 2163
Hpy188III	TCNNGA	7 cut(s)	107, 638, 719, 1035, 1100, 1673, 1950
Hpy8I	GTNNAC	8 cut(s)	81, 348, 410, 421, 968, 984, 1708, 2163
Hpy99I	CGWCG	2 cut(s)	355, 2202
HpyAV	CCTTC	7 cut(s)	214, 624, 1229, 1642, 1987, 2015, 2303
HpyCH4III	ACNGT	3 cut(s)	1321, 1533, 1712
HpyCH4IV	ACGT	2 cut(s)	350, 855
HpyF3I	CTNAG	5 cut(s)	84, 505, 526, 581, 1824
HpySE526I	ACGT	2 cut(s)	350, 855
HspAI	GCGC	3 cut(s)	142, 283, 1371
Ksp22I	TGATCA	2 cut(s)	30, 1447
Kzo9I	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
LmnI	GCTCC	8 cut(s)	91, 340, 362, 545, 879, 1365, 1378, 1459
LweI	GCATC	6 cut(s)	691, 816, 1007, 1750, 2132, 2137
MaeI	CTAG	7 cut(s)	324, 1188, 1272, 1386, 1655, 1830, 1845
MaeII	ACGT	2 cut(s)	350, 855
MaeIII	GTNAC	2 cut(s)	658, 2099
MalI	GATC	8 cut(s)	32, 182, 451, 1039, 1449, 1512, 1627, 2056
MbiI	CCGCTC	1 cut(s)	76
MboI	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
MfeI	CAATTG	2 cut(s)	258, 1305
MflI	RGATCY	4 cut(s)	180, 449, 1037, 2054
MhlI	GDGCHC	6 cut(s)	1407, 1413, 1419, 2092, 2142, 2231
MluCI	AATT	6 cut(s)	7, 258, 685, 802, 1305, 2118
MlyI	GAGTC	3 cut(s)	539, 1586, 1835
MmeI	TCCRAC	3 cut(s)	340, 362, 729
Mph1103I	ATGCAT	1 cut(s)	1765
MseI	TTAA	3 cut(s)	36, 672, 768
MslI	CAYNNNNRTG	2 cut(s)	1890, 2106
MspA1I	CMGCKG	1 cut(s)	995
MspI	CCGG	2 cut(s)	839, 1257
MspR9I	CCNGG	4 cut(s)	932, 2086, 2133, 2174
MunI	CAATTG	2 cut(s)	258, 1305
MvaI	CCWGG	4 cut(s)	932, 2086, 2133, 2174
MvnI	CGCG	1 cut(s)	283
NcoI	CCATGG	1 cut(s)	1351
NdeII	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
NheI	GCTAGC	1 cut(s)	1187
NlaIV	GGNNCC	2 cut(s)	1524, 2290
NmeAIII	GCCGAG	1 cut(s)	1489
NmuCI	GTSAC	2 cut(s)	658, 2099
NsiI	ATGCAT	1 cut(s)	1765
NspI	RCATGY	2 cut(s)	359, 1251
NspV	TTCGAA	1 cut(s)	1679
PaeI	GCATGC	1 cut(s)	1251
PaeR7I	CTCGAG	1 cut(s)	636
PceI	AGGCCT	2 cut(s)	2084, 2172
PfeI	GAWTC	8 cut(s)	650, 935, 961, 1484, 1676, 1868, 1895, 2208
PflMI	CCANNNNNTGG	3 cut(s)	476, 821, 1206
PfoI	TCCNGGA	1 cut(s)	930
PleI	GAGTC	3 cut(s)	538, 1586, 1834
PpsI	GAGTC	3 cut(s)	538, 1586, 1834
PpuMI	RGGWCCY	3 cut(s)	1522, 1651, 2288
Psp1406I	AACGTT	1 cut(s)	855
Psp5II	RGGWCCY	3 cut(s)	1522, 1651, 2288
Psp6I	CCWGG	4 cut(s)	930, 2084, 2131, 2172
PspFI	CCCAGC	1 cut(s)	1816
PspGI	CCWGG	4 cut(s)	930, 2084, 2131, 2172
PspN4I	GGNNCC	2 cut(s)	1524, 2290
PspPI	GGNCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
PspPPI	RGGWCCY	3 cut(s)	1522, 1651, 2288
PstI	CTGCAG	5 cut(s)	1174, 1330, 1462, 1521, 1745
PstNI	CAGNNNCTG	4 cut(s)	1334, 1541, 1595, 1823
PsuI	RGATCY	4 cut(s)	180, 449, 1037, 2054
PvuII	CAGCTG	1 cut(s)	995
RsaI	GTAC	2 cut(s)	835, 969
RsaNI	GTAC	2 cut(s)	834, 968
RseI	CAYNNNNRTG	2 cut(s)	1890, 2106
SaqAI	TTAA	3 cut(s)	36, 672, 768
Sau3AI	GATC	8 cut(s)	30, 180, 449, 1037, 1447, 1510, 1625, 2054
Sau96I	GGNCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
ScaI	AGTACT	1 cut(s)	835
SchI	GAGTC	3 cut(s)	539, 1586, 1835
ScrFI	CCNGG	4 cut(s)	932, 2086, 2133, 2174
SduI	GDGCHC	6 cut(s)	1407, 1413, 1419, 2092, 2142, 2231
SfaNI	GCATC	6 cut(s)	691, 816, 1007, 1750, 2132, 2137
SfcI	CTRYAG	9 cut(s)	246, 1170, 1320, 1326, 1458, 1517, 1741, 2016, 2232
Sfr274I	CTCGAG	1 cut(s)	636
SfuI	TTCGAA	1 cut(s)	1679
SinI	GGWCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
SlaI	CTCGAG	1 cut(s)	636
SmiMI	CAYNNNNRTG	2 cut(s)	1890, 2106
SmlI	CTYRAG	2 cut(s)	636, 1948
SmoI	CTYRAG	2 cut(s)	636, 1948
SphI	GCATGC	1 cut(s)	1251
Sse9I	AATT	6 cut(s)	7, 258, 685, 802, 1305, 2118
SseBI	AGGCCT	2 cut(s)	2084, 2172
SsiI	CCGC	6 cut(s)	76, 275, 281, 1184, 1223, 1840
SspMI	CTAG	7 cut(s)	324, 1188, 1272, 1386, 1655, 1830, 1845
StuI	AGGCCT	2 cut(s)	2084, 2172
StyD4I	CCNGG	4 cut(s)	930, 2084, 2131, 2172
StyI	CCWWGG	1 cut(s)	1351
TaaI	ACNGT	3 cut(s)	1321, 1533, 1712
TaiI	ACGT	2 cut(s)	353, 858
TaqI	TCGA	4 cut(s)	441, 637, 1679, 2200
TasI	AATT	6 cut(s)	7, 258, 685, 802, 1305, 2118
TatI	WGTACW	2 cut(s)	833, 967
TauI	GCSGC	1 cut(s)	1187
TfiI	GAWTC	8 cut(s)	650, 935, 961, 1484, 1676, 1868, 1895, 2208
Tru1I	TTAA	3 cut(s)	36, 672, 768
Tru9I	TTAA	3 cut(s)	36, 672, 768
TscAI	CASTG	5 cut(s)	423, 460, 542, 624, 1324
TseFI	GTSAC	2 cut(s)	658, 2099
Tsp45I	GTSAC	2 cut(s)	658, 2099
TspGWI	ACGGA	2 cut(s)	1772, 2064
TspRI	CASTG	5 cut(s)	423, 460, 542, 624, 1324
Van91I	CCANNNNNTGG	3 cut(s)	476, 821, 1206
VpaK11BI	GGWCC	6 cut(s)	345, 434, 1522, 1651, 1708, 2288
XagI	CCTNNNNNAGG	1 cut(s)	847
XapI	RAATTY	1 cut(s)	685
XceI	RCATGY	2 cut(s)	359, 1251
XhoI	CTCGAG	1 cut(s)	636
XspI	CTAG	7 cut(s)	324, 1188, 1272, 1386, 1655, 1830, 1845
ZrmI	AGTACT	1 cut(s)	835
Zsp2I	ATGCAT	1 cut(s)	1765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.