Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007839

Physical Location & Seq

Genomic Coordinates Forward (+)

16869189 .. 16873338

Gene Structure 4150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G40400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGAAGCCCACGACCAATGGTGGGCTCTTGGCTTCTCAATCATCTTCCTCCTTCTCGTTTCCGAGATTCCGCGGCCAACTTCCGATTATCTTCTCAGCCAATAATAATCAGAAGAAGAAGAATCTTCCAAATCCAAACGTCGTCACTCTTTGTCTCCACTCTCATTCCAATGTCTCCTCCTCTCAAATCGCCGTCACTCGCCGCGCAATTCTCGTCGCACCACCGCTCCTCGCCGCCGCCGCTTCGTTGTTTCTCTCTATTTCCTCAGCTGCCTCTGCTGAGACTTCTGCGGAATCAGTAGCTCTTCCTCCTGTTGCTACTGCTCCTCCTCCTCCGCCTGTGGAGAAGGAAGAGGCGATAACTTCTAGAATCTATGACGCGTCTGTGCTTGGTGAGCCGATGGCTGTTGGGAAAGATAAGAAGAGAGTGTGGGAGAAGCTATTGAATGCGAGGATTGTCTATCTCGGAGAAGCAGAACAAGTGCCTACAAGAGACGACAAGGTTCTCGAGCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATTGAGAGCGATCGTCAGTTATCTTTAGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAGTTAAACCAATACATGGACAAGAGGATGGATGGAGAGGTATTGAAGTCGTATGTATCACATTGGCCAGTCCAACGTTGGCAAGAGTATGAGCCTCTCTTAAGTTACTGCCGCGATAACGGAGTTAAACTCATTGCTTGTGGCACTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGTCTATCAGAGTCTGAGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTTTACTTCCTTCTCACGTAGTTCTTCACTCAATATGAATCCACTCACACAGATTGTTCCATTTGGACCGAGTTCTTATTTGTCGGCACAAGCTAGAGTTGTTGAAGACCATACAATGTCTCAAGTTATTGTACAAGCAGTTGCAGATGGAGGTGGAACTGGTATGCTGGTAGTGGTGACAGGGGCAAACCATGTTGAGTATGGGTCAAGGGGAACAGGATTGCCGGCAAGGATCTCTAGGAAGATTCCGAAGAAAAGTCAACTTGTTGTGTTACTTGATCCTGAAAGACAGTTTTTGCGGAAAGAGGGTGAATCTCCAGTTGCTGATTTCTTGTGGTATTCTGCGGCCAGACCCTGCAGCAGAAACTGCTTTGACCGAGCAGAAATCGCTCGGGTAATGAATGCGGCTGGTAGGAGACGAGATGCCCTTCCCCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCTGCAGAATTTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGCTTACACAACGGTTCCAGGGATTCCGAGAAAGGTTGTTGGCAGATCCCAAATTCTTGAATAGATTAGCTATTGAAGAAGCTATATCAATAACAACAACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAATTTCTTTGAAGAACTCGACTATGTGATCACTGATAGCGTAAGAGCATCAGTTGTTGATTTTTTCACAGTTTGGCTCCCTGCACCAACCTTGTCTTTTATCTCATATGCTGATGAGACAATTGGGCCAAACAGCATAGATGCCTTAAGAGGCCTCCTAGGGTCCATACCTGACAATGCATTTCAAAAAAGTCTAGGTGGACAAGAGTGGACTCTGAGTCTTAGGATTGCTTCAGTTATTATCGGTGGCTTGAAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGCTTTGTATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAGGTCTCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCGAATATCCGTTATCAGATAATTGCTGGGTTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCAACCTCTACTTGTAAACATGATTTCATTTGTTGTTCGAGTAGCTAACTCCTACTTTGGAACTCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAAACTCAGAAAAGTGTCACAACTTCCAACCAAATCCCCGAGGTTGCGAGCCAATCCACAGTGGAATACAGTACAACTGAAGAGGCAAGTATGGATGATCTTAAGAATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009741 GO:0009987 GO:0010033 GO:0014070 GO:0015994 GO:0015995 GO:0018130 GO:0019438 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofac_haem_bdg RETICULATA-like

Protein Analysis

735

Amino Acids

80.7

Weight (kDa)

8.31

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cofac_haem_bdg	PF04187	143 - 363	4.9e-43	Haem-binding uptake, Tiki superfamily, ChaN
RETICULATA-like	PF11891	470 - 650	3.8e-57	Protein RETICULATA-related

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40400 AT2G40400 AT2G40400 AT3G56140 AT3G56140 AT3G56140
fragaria_vesca	FvH4_7g25380 FvH4_7g25380 FvH4_7g25380
malus_domestica	MD01G1160000.v1.1
prunus_persica	Prupe.2G258000_v2.0.a1
pyrus_communis	pycom01g17640
rosa_chinensis	RchiOBHm_Chr1g0371311 RchiOBHm_Chr1g0371331
rosa_laevigata	RLG00000026971
rosa_multiflora	Rmu_co8326835.1_g000001 Rmu_sc0000809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00285790
rosa_rugosa	Rorug01G0363100
rosa_samantha	Rh1AG373000 Rh1BG336500 Rh1CG349900 Rh1DG367600
rosa_wichuraiana	Rw1G032810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	619
AccBSI	CCGCTC	2 cut(s)	226, 754
AccII	CGCG	5 cut(s)	72, 204, 380, 717, 2080
AclI	AACGTT	1 cut(s)	679
AclWI	GGATC	4 cut(s)	1094, 1127, 1418, 1813
AcoI	YGGCCR	3 cut(s)	73, 668, 1200
AcsI	RAATTY	5 cut(s)	526, 1342, 1430, 1510, 1835
AcuI	CTGAAG	3 cut(s)	1725, 1910, 2193
AfaI	GTAC	2 cut(s)	987, 2167
AfiI	CCNNNNNNNGG	6 cut(s)	21, 619, 781, 833, 1318, 1853
AflII	CTTAAG	3 cut(s)	703, 1654, 2195
AflIII	ACRYGT	1 cut(s)	378
AhdI	GACNNNNNGTC	1 cut(s)	1725
AjnI	CCWGG	1 cut(s)	1395
Alw21I	GWGCWC	1 cut(s)	513
Alw26I	GTCTC	8 cut(s)	158, 178, 275, 486, 978, 1264, 1619, 1884
AlwI	GGATC	4 cut(s)	1094, 1127, 1418, 1813
AlwNI	CAGNNNCTG	4 cut(s)	806, 1178, 1209, 1221
Ama87I	CYCGRG	3 cut(s)	506, 1245, 2132
AoxI	GGCC	6 cut(s)	73, 668, 1200, 1634, 1660, 1896
ApeKI	GCWGC	3 cut(s)	269, 1212, 1796
ApoI	RAATTY	5 cut(s)	526, 1342, 1430, 1510, 1835
Asp700I	GAANNNNTTC	2 cut(s)	582, 1927
AspA2I	CCTAGG	1 cut(s)	1666
AspLEI	GCGC	3 cut(s)	206, 2080, 2082
AspS9I	GGNCC	4 cut(s)	920, 1634, 1671, 1897
AsuHPI	GGTGA	5 cut(s)	404, 1042, 1175, 1317, 1874
AsuII	TTCGAA	1 cut(s)	1931
AvaI	CYCGRG	3 cut(s)	506, 1245, 2132
AvaII	GGWCC	2 cut(s)	920, 1671
AvrII	CCTAGG	1 cut(s)	1666
BalI	TGGCCA	1 cut(s)	670
BanII	GRGCYC	2 cut(s)	27, 513
BbsI	GAAGAC	2 cut(s)	966, 1898
Bbv12I	GWGCWC	1 cut(s)	513
BbvCI	CCTCAGC	2 cut(s)	265, 780
BbvI	GCAGC	3 cut(s)	256, 1224, 1808
BccI	CCATC	4 cut(s)	394, 625, 629, 995
BceAI	ACGGC	2 cut(s)	176, 1911
BciT130I	CCWGG	1 cut(s)	1397
BciVI	GTATCC	1 cut(s)	797
BclI	TGATCA	1 cut(s)	1536
BcoDI	GTCTC	8 cut(s)	158, 178, 275, 486, 978, 1264, 1619, 1884
BfaI	CTAG	5 cut(s)	366, 948, 1092, 1667, 1703
BfmI	CTRYAG	2 cut(s)	1210, 1337
BfrI	CTTAAG	3 cut(s)	703, 1654, 2195
BfuI	GTATCC	1 cut(s)	797
BlnI	CCTAGG	1 cut(s)	1666
Bme1390I	CCNGG	1 cut(s)	1397
Bme18I	GGWCC	2 cut(s)	920, 1671
BmeRI	GACNNNNNGTC	1 cut(s)	1725
BmeT110I	CYCGRG	3 cut(s)	506, 1245, 2132
BmgT120I	GGNCC	4 cut(s)	920, 1634, 1671, 1897
BmiI	GGNNCC	3 cut(s)	1394, 1586, 1672
BmrFI	CCNGG	1 cut(s)	1397
BmsI	GCATC	4 cut(s)	1267, 1565, 1639, 1978
BoxI	GACNNNNGTC	1 cut(s)	1314
BpiI	GAAGAC	2 cut(s)	966, 1898
BplI	GAGNNNNNCTC	2 cut(s)	717, 749
BpmI	CTGGAG	1 cut(s)	1155
Bpu10I	CCTNAGC	2 cut(s)	265, 780
Bpu14I	TTCGAA	1 cut(s)	1931
BpuEI	CTTGAG	2 cut(s)	740, 960
BsaAI	YACGTR	1 cut(s)	872
BsaI	GGTCTC	1 cut(s)	1884
BsaJI	CCNNGG	6 cut(s)	70, 790, 1312, 1396, 1666, 2133
BsaXI	ACNNNNNCTCC	4 cut(s)	210, 240, 310, 340
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 619, 781, 833, 1318, 1853
Bse118I	RCCGGY	1 cut(s)	1078
Bse1I	ACTGG	4 cut(s)	671, 1018, 1172, 1788
Bse3DI	GCAATG	2 cut(s)	735, 2069
BseBI	CCWGG	1 cut(s)	1397
BseDI	CCNNGG	6 cut(s)	70, 790, 1312, 1396, 1666, 2133
BseGI	GGATG	3 cut(s)	636, 640, 2194
BseLI	CCNNNNNNNGG	6 cut(s)	21, 619, 781, 833, 1318, 1853
BseMI	GCAATG	2 cut(s)	735, 2069
BseNI	ACTGG	4 cut(s)	671, 1018, 1172, 1788
BsePI	GCGCGC	1 cut(s)	2078
BseRI	GAGGAG	7 cut(s)	166, 169, 218, 315, 318, 321, 816
BseXI	GCAGC	3 cut(s)	256, 1224, 1808
BseYI	CCCAGC	1 cut(s)	1955
BsgI	GTGCAG	1 cut(s)	1575
Bsh1236I	CGCG	5 cut(s)	72, 204, 380, 717, 2080
Bsh1285I	CGRYCG	1 cut(s)	556
BshFI	GGCC	6 cut(s)	75, 670, 1202, 1636, 1662, 1898
BsiEI	CGRYCG	1 cut(s)	556
BsiHKAI	GWGCWC	1 cut(s)	513
BsiHKCI	CYCGRG	3 cut(s)	506, 1245, 2132
BsiSI	CCGG	1 cut(s)	1079
BslI	CCNNNNNNNGG	6 cut(s)	21, 619, 781, 833, 1318, 1853
BsmAI	GTCTC	8 cut(s)	158, 178, 275, 486, 978, 1264, 1619, 1884
BsmBI	CGTCTC	2 cut(s)	486, 1264
BsmI	GAATGC	2 cut(s)	451, 1261
BsnI	GGCC	6 cut(s)	75, 670, 1202, 1636, 1662, 1898
Bso31I	GGTCTC	1 cut(s)	1884
BsoBI	CYCGRG	3 cut(s)	506, 1245, 2132
Bsp119I	TTCGAA	1 cut(s)	1931
Bsp1286I	GDGCHC	2 cut(s)	27, 513
Bsp1407I	TGTACA	1 cut(s)	985
Bsp143I	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
BspANI	GGCC	6 cut(s)	75, 670, 1202, 1636, 1662, 1898
BspFNI	CGCG	5 cut(s)	72, 204, 380, 717, 2080
BspLI	GGNNCC	3 cut(s)	1394, 1586, 1672
BspMAI	CTGCAG	2 cut(s)	1214, 1341
BspPI	GGATC	4 cut(s)	1094, 1127, 1418, 1813
BspQI	GCTCTTC	1 cut(s)	309
BspT104I	TTCGAA	1 cut(s)	1931
BspTI	CTTAAG	3 cut(s)	703, 1654, 2195
BspTNI	GGTCTC	1 cut(s)	1884
BsrBI	CCGCTC	2 cut(s)	226, 754
BsrDI	GCAATG	2 cut(s)	735, 2069
BsrFI	RCCGGY	1 cut(s)	1078
BsrGI	TGTACA	1 cut(s)	985
BsrI	ACTGG	4 cut(s)	671, 1018, 1172, 1788
BssAI	RCCGGY	1 cut(s)	1078
BssECI	CCNNGG	6 cut(s)	70, 790, 1312, 1396, 1666, 2133
BssHII	GCGCGC	1 cut(s)	2078
BssMI	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
BssT1I	CCWWGG	2 cut(s)	1312, 1666
Bst2UI	CCWGG	1 cut(s)	1397
Bst4CI	ACNGT	7 cut(s)	606, 772, 1146, 1392, 1579, 2155, 2165
Bst6I	CTCTTC	4 cut(s)	309, 345, 416, 2169
BstAFI	CTTAAG	3 cut(s)	703, 1654, 2195
BstAPI	GCANNNNNTGC	1 cut(s)	1221
BstAUI	TGTACA	1 cut(s)	985
BstBAI	YACGTR	1 cut(s)	872
BstBI	TTCGAA	1 cut(s)	1931
BstC8I	GCNNGC	5 cut(s)	1080, 1767, 1869, 2080, 2143
BstDSI	CCRYGG	2 cut(s)	70, 790
BstF5I	GGATG	3 cut(s)	636, 640, 2194
BstFNI	CGCG	5 cut(s)	72, 204, 380, 717, 2080
BstHHI	GCGC	3 cut(s)	206, 2080, 2082
BstKTI	GATC	8 cut(s)	556, 1089, 1135, 1426, 1539, 1808, 2074, 2194
BstMAI	GTCTC	8 cut(s)	158, 178, 275, 486, 978, 1264, 1619, 1884
BstMBI	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
BstMCI	CGRYCG	1 cut(s)	556
BstMWI	GCNNNNNNNGC	7 cut(s)	239, 275, 394, 578, 1221, 1241, 1823
BstNI	CCWGG	1 cut(s)	1397
BstPAI	GACNNNNGTC	1 cut(s)	1314
BstSCI	CCNGG	1 cut(s)	1395
BstSFI	CTRYAG	2 cut(s)	1210, 1337
BstUI	CGCG	5 cut(s)	72, 204, 380, 717, 2080
BstV1I	GCAGC	3 cut(s)	256, 1224, 1808
BstV2I	GAAGAC	2 cut(s)	966, 1898
BstX2I	RGATCY	3 cut(s)	1086, 1423, 1805
BstYI	RGATCY	3 cut(s)	1086, 1423, 1805
BsuI	GTATCC	1 cut(s)	797
BsuRI	GGCC	6 cut(s)	75, 670, 1202, 1636, 1662, 1898
BtgI	CCRYGG	2 cut(s)	70, 790
BtgZI	GCGATG	2 cut(s)	553, 1955
BtsCI	GGATG	3 cut(s)	636, 640, 2194
BtsIMutI	CAGTG	2 cut(s)	1539, 2160
Cac8I	GCNNGC	5 cut(s)	1080, 1767, 1869, 2080, 2143
CaiI	CAGNNNCTG	4 cut(s)	806, 1178, 1209, 1221
CfoI	GCGC	3 cut(s)	206, 2080, 2082
Cfr10I	RCCGGY	1 cut(s)	1078
Cfr13I	GGNCC	4 cut(s)	920, 1634, 1671, 1897
Cfr42I	CCGCGG	1 cut(s)	73
CseI	GACGC	2 cut(s)	369, 386
Csp6I	GTAC	2 cut(s)	986, 2166
CviAII	CATG	3 cut(s)	619, 1046, 2014
CviQI	GTAC	2 cut(s)	986, 2166
DpnI	GATC	8 cut(s)	555, 1088, 1134, 1425, 1538, 1807, 2073, 2193
DpnII	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
DriI	GACNNNNNGTC	1 cut(s)	1725
EaeI	YGGCCR	3 cut(s)	73, 668, 1200
Eam1104I	CTCTTC	4 cut(s)	309, 345, 416, 2169
Eam1105I	GACNNNNNGTC	1 cut(s)	1725
EarI	CTCTTC	4 cut(s)	309, 345, 416, 2169
EciI	GGCGGA	1 cut(s)	324
Ecl136II	GAGCTC	1 cut(s)	511
Eco130I	CCWWGG	2 cut(s)	1312, 1666
Eco147I	AGGCCT	1 cut(s)	1662
Eco24I	GRGCYC	2 cut(s)	27, 513
Eco31I	GGTCTC	1 cut(s)	1884
Eco47I	GGWCC	2 cut(s)	920, 1671
Eco53kI	GAGCTC	1 cut(s)	511
Eco57I	CTGAAG	3 cut(s)	1725, 1910, 2193
Eco88I	CYCGRG	3 cut(s)	506, 1245, 2132
EcoICRI	GAGCTC	1 cut(s)	511
EcoRII	CCWGG	1 cut(s)	1395
EcoT14I	CCWWGG	2 cut(s)	1312, 1666
EcoT22I	ATGCAT	1 cut(s)	1690
EcoT38I	GRGCYC	2 cut(s)	27, 513
ErhI	CCWWGG	2 cut(s)	1312, 1666
Esp3I	CGTCTC	2 cut(s)	486, 1264
FaeI	CATG	3 cut(s)	622, 1049, 2017
FatI	CATG	3 cut(s)	618, 1045, 2013
FauI	CCCGC	1 cut(s)	826
FauNDI	CATATG	1 cut(s)	1615
FbaI	TGATCA	1 cut(s)	1536
FokI	GGATG	3 cut(s)	643, 647, 2201
FriOI	GRGCYC	2 cut(s)	27, 513
FspBI	CTAG	5 cut(s)	366, 948, 1092, 1667, 1703
GlaI	GCGC	3 cut(s)	205, 2079, 2081
GsaI	CCCAGC	1 cut(s)	1959
GsuI	CTGGAG	1 cut(s)	1155
HaeIII	GGCC	6 cut(s)	75, 670, 1202, 1636, 1662, 1898
HapII	CCGG	1 cut(s)	1079
HgaI	GACGC	2 cut(s)	369, 386
HhaI	GCGC	3 cut(s)	206, 2080, 2082
Hin1II	CATG	3 cut(s)	622, 1049, 2017
Hin6I	GCGC	3 cut(s)	204, 2078, 2080
HinP1I	GCGC	3 cut(s)	204, 2078, 2080
HincII	GTYRAC	1 cut(s)	1115
HindII	GTYRAC	1 cut(s)	1115
HindIII	AAGCTT	1 cut(s)	1763
HpaII	CCGG	1 cut(s)	1079
HphI	GGTGA	5 cut(s)	404, 1042, 1175, 1317, 1874
Hpy166II	GTNNAC	5 cut(s)	858, 1115, 1709, 1719, 2011
Hpy188III	TCNNGA	6 cut(s)	366, 506, 520, 590, 1136, 1435
Hpy8I	GTNNAC	5 cut(s)	858, 1115, 1709, 1719, 2011
Hpy99I	CGWCG	2 cut(s)	143, 218
HpyAV	CCTTC	4 cut(s)	61, 340, 874, 1292
HpyCH4III	ACNGT	7 cut(s)	606, 772, 1146, 1392, 1579, 2155, 2165
HpyCH4IV	ACGT	3 cut(s)	138, 679, 871
HpyCH4V	TGCA	9 cut(s)	598, 998, 1212, 1339, 1592, 1688, 1796, 1826, 2095
HpyF10VI	GCNNNNNNNGC	7 cut(s)	239, 275, 394, 578, 1221, 1241, 1823
HpySE526I	ACGT	3 cut(s)	138, 679, 871
Hsp92II	CATG	3 cut(s)	622, 1049, 2017
HspAI	GCGC	3 cut(s)	204, 2078, 2080
KroI	GCCGGC	1 cut(s)	1078
KroNI	GCCGGC	1 cut(s)	1080
Ksp22I	TGATCA	1 cut(s)	1536
KspI	CCGCGG	1 cut(s)	73
Kzo9I	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
LguI	GCTCTTC	1 cut(s)	309
LmnI	GCTCC	4 cut(s)	231, 328, 1357, 1590
Lsp1109I	GCAGC	3 cut(s)	256, 1224, 1808
LweI	GCATC	4 cut(s)	1267, 1565, 1639, 1978
MaeI	CTAG	5 cut(s)	366, 948, 1092, 1667, 1703
MaeII	ACGT	3 cut(s)	138, 679, 871
MaeIII	GTNAC	7 cut(s)	142, 193, 707, 1030, 1125, 1323, 2110
MalI	GATC	8 cut(s)	555, 1088, 1134, 1425, 1538, 1807, 2073, 2193
MbiI	CCGCTC	2 cut(s)	226, 754
MboI	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
MfeI	CAATTG	1 cut(s)	1629
MflI	RGATCY	3 cut(s)	1086, 1423, 1805
MhlI	GDGCHC	2 cut(s)	27, 513
MlsI	TGGCCA	1 cut(s)	670
MluCI	AATT	9 cut(s)	207, 526, 815, 1342, 1430, 1510, 1629, 1835, 1950
MluI	ACGCGT	1 cut(s)	378
MluNI	TGGCCA	1 cut(s)	670
MlyI	GAGTC	3 cut(s)	812, 1714, 1735
MmeI	TCCRAC	3 cut(s)	700, 1756, 2145
Mox20I	TGGCCA	1 cut(s)	670
Mph1103I	ATGCAT	1 cut(s)	1690
MroNI	GCCGGC	1 cut(s)	1078
MroXI	GAANNNNTTC	2 cut(s)	582, 1927
MscI	TGGCCA	1 cut(s)	670
MseI	TTAA	8 cut(s)	608, 704, 729, 764, 1655, 1842, 1961, 2196
MslI	CAYNNNNRTG	1 cut(s)	168
Msp20I	TGGCCA	1 cut(s)	670
MspA1I	CMGCKG	3 cut(s)	72, 269, 1799
MspCI	CTTAAG	3 cut(s)	703, 1654, 2195
MspI	CCGG	1 cut(s)	1079
MspR9I	CCNGG	1 cut(s)	1397
MunI	CAATTG	1 cut(s)	1629
Mva1269I	GAATGC	2 cut(s)	451, 1261
MvaI	CCWGG	1 cut(s)	1397
MvnI	CGCG	5 cut(s)	72, 204, 380, 717, 2080
MwoI	GCNNNNNNNGC	7 cut(s)	239, 275, 394, 578, 1221, 1241, 1823
NaeI	GCCGGC	1 cut(s)	1080
NdeI	CATATG	1 cut(s)	1615
NdeII	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
NgoMIV	GCCGGC	1 cut(s)	1078
NlaIII	CATG	3 cut(s)	622, 1049, 2017
NlaIV	GGNNCC	3 cut(s)	1394, 1586, 1672
NmuCI	GTSAC	5 cut(s)	142, 193, 1030, 1323, 2110
NsiI	ATGCAT	1 cut(s)	1690
NspV	TTCGAA	1 cut(s)	1931
PaeR7I	CTCGAG	1 cut(s)	506
PauI	GCGCGC	1 cut(s)	2078
PceI	AGGCCT	1 cut(s)	1662
PciSI	GCTCTTC	1 cut(s)	309
PctI	GAATGC	2 cut(s)	451, 1261
PdiI	GCCGGC	1 cut(s)	1080
PdmI	GAANNNNTTC	2 cut(s)	582, 1927
PflMI	CCANNNNNTGG	1 cut(s)	619
Ple19I	CGATCG	1 cut(s)	556
PleI	GAGTC	3 cut(s)	811, 1714, 1734
PpsI	GAGTC	3 cut(s)	811, 1714, 1734
Ppu21I	YACGTR	1 cut(s)	872
PshAI	GACNNNNGTC	1 cut(s)	1314
Psp124BI	GAGCTC	1 cut(s)	513
Psp1406I	AACGTT	1 cut(s)	679
Psp6I	CCWGG	1 cut(s)	1395
PspFI	CCCAGC	1 cut(s)	1955
PspGI	CCWGG	1 cut(s)	1395
PspN4I	GGNNCC	3 cut(s)	1394, 1586, 1672
PspPI	GGNCC	4 cut(s)	920, 1634, 1671, 1897
PstI	CTGCAG	2 cut(s)	1214, 1341
PstNI	CAGNNNCTG	4 cut(s)	806, 1178, 1209, 1221
PsuI	RGATCY	3 cut(s)	1086, 1423, 1805
PteI	GCGCGC	1 cut(s)	2078
PvuI	CGATCG	1 cut(s)	556
PvuII	CAGCTG	2 cut(s)	269, 1799
RsaI	GTAC	2 cut(s)	987, 2167
RsaNI	GTAC	2 cut(s)	986, 2166
RseI	CAYNNNNRTG	1 cut(s)	168
SacI	GAGCTC	1 cut(s)	513
SacII	CCGCGG	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	309
SaqAI	TTAA	8 cut(s)	608, 704, 729, 764, 1655, 1842, 1961, 2196
Sau3AI	GATC	8 cut(s)	553, 1086, 1132, 1423, 1536, 1805, 2071, 2191
Sau96I	GGNCC	4 cut(s)	920, 1634, 1671, 1897
SchI	GAGTC	3 cut(s)	812, 1714, 1735
ScrFI	CCNGG	1 cut(s)	1397
SduI	GDGCHC	2 cut(s)	27, 513
SfaNI	GCATC	4 cut(s)	1267, 1565, 1639, 1978
SfcI	CTRYAG	2 cut(s)	1210, 1337
Sfr274I	CTCGAG	1 cut(s)	506
Sfr303I	CCGCGG	1 cut(s)	73
SfuI	TTCGAA	1 cut(s)	1931
SgrBI	CCGCGG	1 cut(s)	73
SinI	GGWCC	2 cut(s)	920, 1671
SlaI	CTCGAG	1 cut(s)	506
SmiMI	CAYNNNNRTG	1 cut(s)	168
SmlI	CTYRAG	6 cut(s)	506, 703, 755, 975, 1654, 2195
SmoI	CTYRAG	6 cut(s)	506, 703, 755, 975, 1654, 2195
Sse9I	AATT	9 cut(s)	207, 526, 815, 1342, 1430, 1510, 1629, 1835, 1950
SseBI	AGGCCT	1 cut(s)	1662
SspMI	CTAG	5 cut(s)	366, 948, 1092, 1667, 1703
SstI	GAGCTC	1 cut(s)	513
StuI	AGGCCT	1 cut(s)	1662
StyD4I	CCNGG	1 cut(s)	1395
StyI	CCWWGG	2 cut(s)	1312, 1666
TaaI	ACNGT	7 cut(s)	606, 772, 1146, 1392, 1579, 2155, 2165
TaiI	ACGT	3 cut(s)	141, 682, 874
TaqI	TCGA	5 cut(s)	507, 513, 1527, 1931, 2032
TaqII	GACCGA	2 cut(s)	937, 1245
TasI	AATT	9 cut(s)	207, 526, 815, 1342, 1430, 1510, 1629, 1835, 1950
TatI	WGTACW	2 cut(s)	985, 2165
TauI	GCSGC	8 cut(s)	75, 204, 236, 239, 242, 717, 1202, 1262
Tru1I	TTAA	8 cut(s)	608, 704, 729, 764, 1655, 1842, 1961, 2196
Tru9I	TTAA	8 cut(s)	608, 704, 729, 764, 1655, 1842, 1961, 2196
TscAI	CASTG	2 cut(s)	1546, 2160
TseFI	GTSAC	5 cut(s)	142, 193, 1030, 1323, 2110
TseI	GCWGC	3 cut(s)	269, 1212, 1796
Tsp45I	GTSAC	5 cut(s)	142, 193, 1030, 1323, 2110
TspDTI	ATGAA	5 cut(s)	17, 905, 1268, 1828, 2010
TspGWI	ACGGA	3 cut(s)	738, 779, 1928
TspRI	CASTG	2 cut(s)	1546, 2160
Van91I	CCANNNNNTGG	1 cut(s)	619
Vha464I	CTTAAG	3 cut(s)	703, 1654, 2195
VpaK11BI	GGWCC	2 cut(s)	920, 1671
XapI	RAATTY	5 cut(s)	526, 1342, 1430, 1510, 1835
XbaI	TCTAGA	1 cut(s)	365
XcmI	CCANNNNNNNNNTGG	2 cut(s)	678, 1052
XhoI	CTCGAG	1 cut(s)	506
XmaJI	CCTAGG	1 cut(s)	1666
XmnI	GAANNNNTTC	2 cut(s)	582, 1927
XspI	CTAG	5 cut(s)	366, 948, 1092, 1667, 1703
Zsp2I	ATGCAT	1 cut(s)	1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.