Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007839

Physical Location & Seq

Genomic Coordinates Forward (+)

61060496 .. 61064795

Gene Structure 4300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G032810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGAAGCCGCACACTAACACTGGCTTCGCCGTGAGTAGTCCACTCCACGTCACCTCTCCTCCCCGCGCCTCACCGGGAATCTCTCTCCGGCGACAACTCATCCACGTTTTCCGGCGATTATCTTACACTAAACGCCGCCAAACTAGCCTCTCCGTCGTTCTCCGTCGCAATCCTTCCGCGAATTCCGATAAAAACATCAGAGATTCAATACAAAATGTAAACTATTCAGACGAACCTGGCCGGAGTTCGCTCACGAGGAGACAAGCGCTACTCGCGCCGTCACTGGCGCTGGGCGCGTGGTTTTTAAAATCGGCAGTGGCGAGTGCGGCGGACGACTCGCCTCCTCCGCCGTCAATGACGGTGCCGGTGCCGGTGCCCGTTCCGAGAGCTGAGGAGAAGAAGAAAAAAGAGGATGATGTGATAACGTCGAGGATTTACGACGCGACGGCGATCGGAGAGCCACTGGCGGTGGGAAAAGACAAGAGCAAGGTCTGGGAGAAGCTGATGAAGGCTAGGGTTGTGTATCTAGGCGAAGCAGAGCAGGTTCCGATTCGCGACGATAAAGAATTGGAGCTCGAAATTGTGAGGAATATGAACAAGAGGTGCTTGGAGAGTGAGAAAGCCTTGGCTTTGGCTCTTGAATCTTTTCCATGTGATCTTCAGGACCAGCTCAATCAGTACATGAACAAAAGCATAGATGGTGAAGCTTTGAAGTCATACACTTCACATTGGCCGCCGCAACGGTGGCAGGAGTATGAGCCTCTTCTAAGTTACTGCCGAGATAATGGTGTTCGGCTTGTGGCTTGTGGTACTCCACTCGCGGTCTTACGGACTGTACAAGCGGAGGGAATTCGTGGGCTTTCAAAGGCTGATCGTAAAATGTATGCCCCTCCAGCAGGTTCGGGGTTCATCTCAGGCTTCACTTCAATCACACGCAGATCACCAGTTGATAGTAATTCTCCGACTCAAACTGTTCCATTTGGGCCAAGCTCATATCTATCTGCACAGGCAAGAGTGGTTGAGGATTATACCATGTCCCAGATTATTTTAAAGGCCATGGAAGGTGGAGGAGCAACTGGTATGCTAGTGGTTGTGACAGGTGCAAGCCATGTCAAGTATGGGCTTAGAGGGACAGGATTGCCAGCCAGAATTTCAAAAAAGATGCAAAAGAAAAACCAAGTAGTTATATTACTTGATCCTGAAAGACAGGACATACGGCAAGAGGGAGAAGTTCCTGTTGCTGATTTCTTGTGGTATTCTGCTGCCAGACCCTGCAATAGGAATTGTTTTGATCGTGCTGAAATTGCTCGAGTTATGAATGCAGCAGGCAGGAAAAGAGATGCCCTTCCACAGGACCTTCAGAAAGGACTGGATCTTGGTTTGGTATCTCCAGAGGTATTACAGAACTTCTTTGATCTGGAGCAATATCCTCTTGTTTCGGAACTTACTCAACGGTTCCAGGGTTTCAGGGAAAGATTGTTGGTAGATCCCAAATTCTTGCATAGATTAGCTATAGAAGAATCTATATCAATAACTACTACTCTAATAGCACAATATGAGAGGCGTAAAGAAAATTTCTTTGAGGAGCTGGACTACGTGATTACGGATACTTTAAGGGGGATTGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCTCCGACGTTGTCGTTCCTTTCATATGCTGATGAAATGAATGCGCCTGATAGCATGGATGCTATTAAAGGTCTCCTTGGGTCCATTCCAGACAATGCGTTTCAGAAGAGTCTTGTGGGGCAGGATTGGAGTATCAATCATAGACTTGCATCTGTGCTTTTGGGTGGTCTAAAACTAGCTAGTGTTGGATTTATTTCCAGTATCGGGGCTGTTGCTTCCTCAAATTGTCTGTTTGCAGTTCGCAAATTCATCAATCCAGCTCTGGTTACTAATCAGCAAAAGAAAAGAACTCCAATACTCAAAACAGCAATAATCTATGGAGGCTTTCTCGGAACTTCCGCAAATCTCCGTTATCAGATTATTGCTGGACTAGTGGAGCATCGACTTTCTGACGAATTTTCTTCTCAAACAATACTTGTAAATATGCTGTCTTTTCTTTCTCGGACAATAAACTCTTATTGGGGAACTCAGGTTAGAATCATCTTGATACTTTTCCAAGTCGTCTTATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009741 GO:0009987 GO:0010033 GO:0014070 GO:0015994 GO:0015995 GO:0018130 GO:0019438 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofac_haem_bdg RETICULATA-like

Protein Analysis

721

Amino Acids

80.15

Weight (kDa)

9.3

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cofac_haem_bdg	PF04187	164 - 384	9.3e-45	Haem-binding uptake, Tiki superfamily, ChaN
RETICULATA-like	PF11891	491 - 675	7.3e-61	Protein RETICULATA-related

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40400 AT2G40400 AT2G40400 AT3G56140 AT3G56140 AT3G56140
fragaria_vesca	FvH4_7g25380 FvH4_7g25380 FvH4_7g25380
malus_domestica	MD01G1160000.v1.1
prunus_persica	Prupe.2G258000_v2.0.a1
pyrus_communis	pycom01g17640
rosa_chinensis	RchiOBHm_Chr1g0371311 RchiOBHm_Chr1g0371331
rosa_laevigata	RLG00000026971
rosa_multiflora	Rmu_co8326835.1_g000001 Rmu_sc0000809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00285790
rosa_rugosa	Rorug01G0363100
rosa_samantha	Rh1AG373000 Rh1BG336500 Rh1CG349900 Rh1DG367600
rosa_wichuraiana	Rw1G032810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	532, 887
AccB1I	GGYRCC	3 cut(s)	361, 367, 373
AccII	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
AclWI	GGATC	3 cut(s)	1190, 1380, 1481
AcoI	YGGCCR	2 cut(s)	238, 731
AcsI	RAATTY	7 cut(s)	181, 849, 1149, 1493, 1573, 1898, 2048
AcuI	CTGAAG	2 cut(s)	644, 1343
AfaI	GTAC	3 cut(s)	680, 811, 837
AfeI	AGCGCT	1 cut(s)	267
AfiI	CCNNNNNNNGG	4 cut(s)	896, 1278, 1351, 1857
AgsI	TTSAA	6 cut(s)	207, 641, 712, 864, 927, 1155
AhlI	ACTAGT	1 cut(s)	2023
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	2 cut(s)	235, 1458
Alw21I	GWGCWC	1 cut(s)	576
Alw26I	GTCTC	2 cut(s)	253, 1730
AlwI	GGATC	3 cut(s)	1190, 1380, 1481
AlwNI	CAGNNNCTG	1 cut(s)	1272
Ama87I	CYCGRG	1 cut(s)	1308
Aor51HI	AGCGCT	1 cut(s)	267
AoxI	GGCC	4 cut(s)	238, 731, 983, 1053
ApeKI	GCWGC	2 cut(s)	1262, 1322
ApoI	RAATTY	7 cut(s)	181, 849, 1149, 1493, 1573, 1898, 2048
Asp700I	GAANNNNTTC	1 cut(s)	645
AspLEI	GCGC	6 cut(s)	68, 268, 277, 289, 296, 1699
AspS9I	GGNCC	4 cut(s)	664, 983, 1354, 1734
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	4 cut(s)	43, 63, 713, 933
AvaI	CYCGRG	1 cut(s)	1308
AvaII	GGWCC	3 cut(s)	664, 1354, 1734
BaeGI	GKGCMC	1 cut(s)	378
BanI	GGYRCC	3 cut(s)	361, 367, 373
BanII	GRGCYC	1 cut(s)	576
BauI	CACGAG	1 cut(s)	253
Bbv12I	GWGCWC	1 cut(s)	576
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	2 cut(s)	1249, 1334
BccI	CCATC	1 cut(s)	692
BceAI	ACGGC	5 cut(s)	14, 262, 334, 462, 1232
BciT130I	CCWGG	2 cut(s)	237, 1460
BciVI	GTATCC	1 cut(s)	1600
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	2 cut(s)	253, 1730
BcuI	ACTAGT	1 cut(s)	2023
BfaI	CTAG	7 cut(s)	144, 513, 527, 1085, 1829, 1833, 2024
BfmI	CTRYAG	1 cut(s)	1512
BfoI	RGCGCY	2 cut(s)	269, 290
BfuAI	ACCTGC	2 cut(s)	532, 887
BfuI	GTATCC	1 cut(s)	1600
BisI	GCNGC	7 cut(s)	8, 136, 327, 734, 737, 1263, 1323
BlsI	GCNGC	7 cut(s)	9, 137, 328, 735, 738, 1264, 1324
Bme1390I	CCNGG	3 cut(s)	75, 237, 1460
Bme18I	GGWCC	3 cut(s)	664, 1354, 1734
BmeT110I	CYCGRG	1 cut(s)	1308
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	664, 983, 1354, 1734
BmiI	GGNNCC	6 cut(s)	363, 369, 375, 546, 1457, 1735
BmrFI	CCNGG	3 cut(s)	75, 237, 1460
BmsI	GCATC	5 cut(s)	1152, 1330, 1702, 1811, 2041
BplI	GAGNNNNNCTC	2 cut(s)	1965, 1997
BpmI	CTGGAG	3 cut(s)	876, 1374, 1439
Bpu10I	CCTNAGC	1 cut(s)	390
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	1597
BsaI	GGTCTC	1 cut(s)	1730
BsaJI	CCNNGG	4 cut(s)	624, 1056, 1459, 1729
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	4 cut(s)	896, 1278, 1351, 1857
Bse118I	RCCGGY	2 cut(s)	364, 370
Bse1I	ACTGG	7 cut(s)	25, 288, 468, 944, 1081, 1374, 1851
BseBI	CCWGG	2 cut(s)	237, 1460
BseDI	CCNNGG	4 cut(s)	624, 1056, 1459, 1729
BseGI	GGATG	3 cut(s)	99, 418, 1717
BseLI	CCNNNNNNNGG	4 cut(s)	896, 1278, 1351, 1857
BseMII	CTCAG	3 cut(s)	381, 927, 2135
BseNI	ACTGG	7 cut(s)	25, 288, 468, 944, 1081, 1374, 1851
BseRI	GAGGAG	6 cut(s)	48, 271, 333, 407, 1083, 1598
BseSI	GKGCMC	1 cut(s)	378
BseXI	GCAGC	2 cut(s)	1249, 1334
BseYI	CCCAGC	1 cut(s)	289
BsgI	GTGCAG	1 cut(s)	987
Bsh1236I	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
Bsh1285I	CGRYCG	1 cut(s)	453
BshFI	GGCC	4 cut(s)	240, 733, 985, 1055
BshNI	GGYRCC	3 cut(s)	361, 367, 373
BsiEI	CGRYCG	1 cut(s)	453
BsiHKAI	GWGCWC	1 cut(s)	576
BsiHKCI	CYCGRG	1 cut(s)	1308
BsiSI	CCGG	6 cut(s)	74, 88, 112, 241, 365, 371
BslFI	GGGAC	2 cut(s)	1021, 1144
BslI	CCNNNNNNNGG	4 cut(s)	896, 1278, 1351, 1857
BsmAI	GTCTC	2 cut(s)	253, 1730
BsmFI	GGGAC	2 cut(s)	1021, 1144
BsmI	GAATGC	2 cut(s)	1324, 1699
BsnI	GGCC	4 cut(s)	240, 733, 985, 1055
Bso31I	GGTCTC	1 cut(s)	1730
BsoBI	CYCGRG	1 cut(s)	1308
Bsp1286I	GDGCHC	2 cut(s)	378, 576
Bsp1407I	TGTACA	1 cut(s)	835
Bsp143I	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
Bsp19I	CCATGG	1 cut(s)	1056
Bsp68I	TCGCGA	1 cut(s)	555
BspANI	GGCC	4 cut(s)	240, 733, 985, 1055
BspCNI	CTCAG	3 cut(s)	382, 926, 2134
BspFNI	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
BspLI	GGNNCC	6 cut(s)	363, 369, 375, 546, 1457, 1735
BspMI	ACCTGC	2 cut(s)	532, 887
BspPI	GGATC	3 cut(s)	1190, 1380, 1481
BspT107I	GGYRCC	3 cut(s)	361, 367, 373
BspTNI	GGTCTC	1 cut(s)	1730
BsrFI	RCCGGY	2 cut(s)	364, 370
BsrGI	TGTACA	1 cut(s)	835
BsrI	ACTGG	7 cut(s)	25, 288, 468, 944, 1081, 1374, 1851
BssAI	RCCGGY	2 cut(s)	364, 370
BssECI	CCNNGG	4 cut(s)	624, 1056, 1459, 1729
BssMI	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
BssSI	CACGAG	1 cut(s)	253
BssT1I	CCWWGG	3 cut(s)	624, 1056, 1729
Bst2BI	CACGAG	1 cut(s)	253
Bst2UI	CCWGG	2 cut(s)	237, 1460
Bst4CI	ACNGT	6 cut(s)	361, 744, 835, 973, 1455, 1642
Bst6I	CTCTTC	2 cut(s)	768, 1754
BstAUI	TGTACA	1 cut(s)	835
BstBAI	YACGTR	1 cut(s)	1597
BstC8I	GCNNGC	3 cut(s)	1105, 1143, 1327
BstDEI	CTNAG	5 cut(s)	390, 767, 913, 1124, 2121
BstDSI	CCRYGG	1 cut(s)	1056
BstENI	CCTNNNNNAGG	3 cut(s)	894, 1276, 1349
BstF5I	GGATG	3 cut(s)	99, 418, 1717
BstFNI	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
BstH2I	RGCGCY	2 cut(s)	269, 290
BstHHI	GCGC	6 cut(s)	68, 268, 277, 289, 296, 1699
BstKTI	GATC	9 cut(s)	453, 658, 874, 941, 1198, 1294, 1375, 1417, 1489
BstMAI	GTCTC	2 cut(s)	253, 1730
BstMBI	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
BstMCI	CGRYCG	1 cut(s)	453
BstMWI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 293, 326, 346, 745, 893, 1304
BstNI	CCWGG	2 cut(s)	237, 1460
BstSCI	CCNGG	3 cut(s)	73, 235, 1458
BstSFI	CTRYAG	1 cut(s)	1512
BstSLI	GKGCMC	1 cut(s)	378
BstUI	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
BstV1I	GCAGC	2 cut(s)	1249, 1334
BstX2I	RGATCY	2 cut(s)	1372, 1486
BstYI	RGATCY	2 cut(s)	1372, 1486
BsuI	GTATCC	1 cut(s)	1600
BsuRI	GGCC	4 cut(s)	240, 733, 985, 1055
BtgI	CCRYGG	1 cut(s)	1056
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	3 cut(s)	99, 418, 1717
BtsI	GCAGTG	1 cut(s)	321
BtsIMutI	CAGTG	5 cut(s)	18, 281, 321, 461, 1647
BtuMI	TCGCGA	1 cut(s)	555
BveI	ACCTGC	2 cut(s)	532, 887
Cac8I	GCNNGC	3 cut(s)	1105, 1143, 1327
CaiI	CAGNNNCTG	1 cut(s)	1272
CfoI	GCGC	6 cut(s)	68, 268, 277, 289, 296, 1699
Cfr10I	RCCGGY	2 cut(s)	364, 370
Cfr13I	GGNCC	4 cut(s)	664, 983, 1354, 1734
CseI	GACGC	1 cut(s)	449
Csp6I	GTAC	3 cut(s)	679, 810, 836
CviAII	CATG	6 cut(s)	651, 682, 1033, 1057, 1109, 1708
CviQI	GTAC	3 cut(s)	679, 810, 836
DdeI	CTNAG	5 cut(s)	390, 767, 913, 1124, 2121
DpnI	GATC	9 cut(s)	452, 657, 873, 940, 1197, 1293, 1374, 1416, 1488
DpnII	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
DraI	TTTAAA	2 cut(s)	306, 1050
EaeI	YGGCCR	2 cut(s)	238, 731
Eam1104I	CTCTTC	2 cut(s)	768, 1754
EarI	CTCTTC	2 cut(s)	768, 1754
EciI	GGCGGA	2 cut(s)	336, 344
Ecl136II	GAGCTC	1 cut(s)	574
Eco130I	CCWWGG	3 cut(s)	624, 1056, 1729
Eco24I	GRGCYC	1 cut(s)	576
Eco31I	GGTCTC	1 cut(s)	1730
Eco47I	GGWCC	3 cut(s)	664, 1354, 1734
Eco47III	AGCGCT	1 cut(s)	267
Eco53kI	GAGCTC	1 cut(s)	574
Eco57I	CTGAAG	2 cut(s)	644, 1343
Eco88I	CYCGRG	1 cut(s)	1308
EcoICRI	GAGCTC	1 cut(s)	574
EcoNI	CCTNNNNNAGG	3 cut(s)	894, 1276, 1349
EcoO109I	RGGNCCY	1 cut(s)	1354
EcoRI	GAATTC	2 cut(s)	181, 849
EcoRII	CCWGG	2 cut(s)	235, 1458
EcoT14I	CCWWGG	3 cut(s)	624, 1056, 1729
EcoT38I	GRGCYC	1 cut(s)	576
ErhI	CCWWGG	3 cut(s)	624, 1056, 1729
FaeI	CATG	6 cut(s)	654, 685, 1036, 1060, 1112, 1711
FalI	AAGNNNNNCTT	4 cut(s)	590, 622, 1713, 1745
FaqI	GGGAC	2 cut(s)	1021, 1144
FatI	CATG	6 cut(s)	650, 681, 1032, 1056, 1108, 1707
FauI	CCCGC	1 cut(s)	71
FauNDI	CATATG	1 cut(s)	1678
Fnu4HI	GCNGC	7 cut(s)	8, 136, 327, 734, 737, 1263, 1323
FokI	GGATG	3 cut(s)	86, 425, 1724
FriOI	GRGCYC	1 cut(s)	576
Fsp4HI	GCNGC	7 cut(s)	8, 136, 327, 734, 737, 1263, 1323
FspBI	CTAG	7 cut(s)	144, 513, 527, 1085, 1829, 1833, 2024
GlaI	GCGC	6 cut(s)	67, 267, 276, 288, 295, 1698
GluI	GCNGC	7 cut(s)	8, 136, 327, 734, 737, 1263, 1323
GsaI	CCCAGC	1 cut(s)	293
GsuI	CTGGAG	3 cut(s)	876, 1374, 1439
HaeII	RGCGCY	2 cut(s)	269, 290
HaeIII	GGCC	4 cut(s)	240, 733, 985, 1055
HapII	CCGG	6 cut(s)	74, 88, 112, 241, 365, 371
HgaI	GACGC	1 cut(s)	449
HhaI	GCGC	6 cut(s)	68, 268, 277, 289, 296, 1699
Hin1II	CATG	6 cut(s)	654, 685, 1036, 1060, 1112, 1711
Hin6I	GCGC	6 cut(s)	66, 266, 275, 287, 294, 1697
HinP1I	GCGC	6 cut(s)	66, 266, 275, 287, 294, 1697
HindIII	AAGCTT	1 cut(s)	705
HinfI	GANTC	9 cut(s)	78, 203, 335, 550, 641, 964, 1520, 1762, 2130
HpaII	CCGG	6 cut(s)	74, 88, 112, 241, 365, 371
HphI	GGTGA	4 cut(s)	43, 63, 713, 933
Hpy166II	GTNNAC	2 cut(s)	41, 220
Hpy188III	TCNNGA	9 cut(s)	253, 554, 638, 662, 1199, 1391, 1418, 1742, 2137
Hpy8I	GTNNAC	2 cut(s)	41, 220
Hpy99I	CGWCG	7 cut(s)	158, 168, 430, 443, 448, 560, 1663
HpyAV	CCTTC	5 cut(s)	183, 502, 1055, 1355, 1367
HpyCH4III	ACNGT	6 cut(s)	361, 744, 835, 973, 1455, 1642
HpyCH4IV	ACGT	5 cut(s)	48, 105, 425, 1596, 1661
HpyCH4V	TGCA	8 cut(s)	1004, 1103, 1165, 1275, 1322, 1501, 1802, 1889
HpyF10VI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 293, 326, 346, 745, 893, 1304
HpyF3I	CTNAG	5 cut(s)	390, 767, 913, 1124, 2121
HpySE526I	ACGT	5 cut(s)	48, 105, 425, 1596, 1661
Hsp92II	CATG	6 cut(s)	654, 685, 1036, 1060, 1112, 1711
HspAI	GCGC	6 cut(s)	66, 266, 275, 287, 294, 1697
Kzo9I	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
LmnI	GCTCC	6 cut(s)	571, 1070, 1420, 1585, 1660, 2029
Lsp1109I	GCAGC	2 cut(s)	1249, 1334
LweI	GCATC	5 cut(s)	1152, 1330, 1702, 1811, 2041
MaeI	CTAG	7 cut(s)	144, 513, 527, 1085, 1829, 1833, 2024
MaeII	ACGT	5 cut(s)	48, 105, 425, 1596, 1661
MaeIII	GTNAC	5 cut(s)	49, 279, 770, 1093, 1918
MalI	GATC	9 cut(s)	452, 657, 873, 940, 1197, 1293, 1374, 1416, 1488
MboI	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
MboII	GAAGA	7 cut(s)	409, 412, 650, 755, 1529, 1771, 2046
MflI	RGATCY	2 cut(s)	1372, 1486
MhlI	GDGCHC	2 cut(s)	378, 576
MlyI	GAGTC	3 cut(s)	329, 958, 1771
MmeI	TCCRAC	3 cut(s)	986, 1682, 1819
MroXI	GAANNNNTTC	1 cut(s)	645
MseI	TTAA	4 cut(s)	305, 1049, 1613, 1719
MspI	CCGG	6 cut(s)	74, 88, 112, 241, 365, 371
MspR9I	CCNGG	3 cut(s)	75, 237, 1460
Mva1269I	GAATGC	2 cut(s)	1324, 1699
MvaI	CCWGG	2 cut(s)	237, 1460
MvnI	CGCG	7 cut(s)	66, 179, 275, 296, 443, 555, 821
MwoI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 293, 326, 346, 745, 893, 1304
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	1 cut(s)	1056
NdeI	CATATG	1 cut(s)	1678
NdeII	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
NlaIII	CATG	6 cut(s)	654, 685, 1036, 1060, 1112, 1711
NlaIV	GGNNCC	6 cut(s)	363, 369, 375, 546, 1457, 1735
NmeAIII	GCCGAG	1 cut(s)	803
NmuCI	GTSAC	3 cut(s)	49, 279, 1093
NruI	TCGCGA	1 cut(s)	555
PaeR7I	CTCGAG	1 cut(s)	1308
PcsI	WCGNNNNNNNCGW	1 cut(s)	317
PctI	GAATGC	2 cut(s)	1324, 1699
PdmI	GAANNNNTTC	1 cut(s)	645
PfeI	GAWTC	6 cut(s)	78, 203, 550, 641, 1520, 2130
PflFI	GACNNNGTC	1 cut(s)	1663
PkrI	GCNGC	7 cut(s)	9, 137, 328, 735, 738, 1264, 1324
Ple19I	CGATCG	1 cut(s)	453
PleI	GAGTC	3 cut(s)	329, 958, 1770
PpsI	GAGTC	3 cut(s)	329, 958, 1770
Ppu21I	YACGTR	1 cut(s)	1597
PpuMI	RGGWCCY	1 cut(s)	1354
Psp124BI	GAGCTC	1 cut(s)	576
Psp5II	RGGWCCY	1 cut(s)	1354
Psp6I	CCWGG	2 cut(s)	235, 1458
PspFI	CCCAGC	1 cut(s)	289
PspGI	CCWGG	2 cut(s)	235, 1458
PspN4I	GGNNCC	6 cut(s)	363, 369, 375, 546, 1457, 1735
PspPI	GGNCC	4 cut(s)	664, 983, 1354, 1734
PspPPI	RGGWCCY	1 cut(s)	1354
PspXI	VCTCGAGB	1 cut(s)	1308
PstNI	CAGNNNCTG	1 cut(s)	1272
PsuI	RGATCY	2 cut(s)	1372, 1486
PsyI	GACNNNGTC	1 cut(s)	1663
PvuI	CGATCG	1 cut(s)	453
RruI	TCGCGA	1 cut(s)	555
RsaI	GTAC	3 cut(s)	680, 811, 837
RsaNI	GTAC	3 cut(s)	679, 810, 836
SacI	GAGCTC	1 cut(s)	576
SaqAI	TTAA	4 cut(s)	305, 1049, 1613, 1719
SatI	GCNGC	7 cut(s)	8, 136, 327, 734, 737, 1263, 1323
Sau3AI	GATC	9 cut(s)	450, 655, 871, 938, 1195, 1291, 1372, 1414, 1486
Sau96I	GGNCC	4 cut(s)	664, 983, 1354, 1734
SchI	GAGTC	3 cut(s)	329, 958, 1771
ScrFI	CCNGG	3 cut(s)	75, 237, 1460
SduI	GDGCHC	2 cut(s)	378, 576
SfaNI	GCATC	5 cut(s)	1152, 1330, 1702, 1811, 2041
SfcI	CTRYAG	1 cut(s)	1512
Sfr274I	CTCGAG	1 cut(s)	1308
SinI	GGWCC	3 cut(s)	664, 1354, 1734
SlaI	CTCGAG	1 cut(s)	1308
SmlI	CTYRAG	1 cut(s)	1308
SmoI	CTYRAG	1 cut(s)	1308
SpeI	ACTAGT	1 cut(s)	2023
SspMI	CTAG	7 cut(s)	144, 513, 527, 1085, 1829, 1833, 2024
SstI	GAGCTC	1 cut(s)	576
StyD4I	CCNGG	3 cut(s)	73, 235, 1458
StyI	CCWWGG	3 cut(s)	624, 1056, 1729
TaaI	ACNGT	6 cut(s)	361, 744, 835, 973, 1455, 1642
TaiI	ACGT	5 cut(s)	51, 108, 428, 1599, 1664
TaqI	TCGA	4 cut(s)	428, 576, 1309, 2035
TatI	WGTACW	2 cut(s)	678, 835
TauI	GCSGC	5 cut(s)	10, 138, 329, 736, 739
TfiI	GAWTC	6 cut(s)	78, 203, 550, 641, 1520, 2130
Tru1I	TTAA	4 cut(s)	305, 1049, 1613, 1719
Tru9I	TTAA	4 cut(s)	305, 1049, 1613, 1719
TscAI	CASTG	5 cut(s)	25, 288, 321, 468, 1647
TseFI	GTSAC	3 cut(s)	49, 279, 1093
TseI	GCWGC	2 cut(s)	1262, 1322
Tsp45I	GTSAC	3 cut(s)	49, 279, 1093
TspGWI	ACGGA	5 cut(s)	142, 152, 844, 1619, 1991
TspRI	CASTG	5 cut(s)	25, 288, 321, 468, 1647
Tth111I	GACNNNGTC	1 cut(s)	1663
VpaK11BI	GGWCC	3 cut(s)	664, 1354, 1734
XagI	CCTNNNNNAGG	3 cut(s)	894, 1276, 1349
XapI	RAATTY	7 cut(s)	181, 849, 1149, 1493, 1573, 1898, 2048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1115
XhoI	CTCGAG	1 cut(s)	1308
XmnI	GAANNNNTTC	1 cut(s)	645
XspI	CTAG	7 cut(s)	144, 513, 527, 1085, 1829, 1833, 2024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.