Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0007839

Physical Location & Seq

Genomic Coordinates Reverse (-)

7327493 .. 7331470

Gene Structure 3978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026971

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGAAGCCGCACATTAACACTGGCTTCGCCGCGAGTAGTCCACTCCACGTCACCTCTCCTCCCCACTCCTCACCGGGAATCTCTCTCCGGCGACAACTCATCCACGTTTTCCGGCGATTATCTTACACTAAAGGCCGCCAAACTAGCCTCTCCGTCATTCTCCGTCGCAATCCTTCCGCGAATTCTGATAAAAACATCAGAGATTCAATACAAAATGAAAACTATTCAGACGAACCTGGCCGGAGTTCGCTCACGAGGAGACAAGCGCTACTCGCGCCGTCACTGGCGCTCGGCACGTGGTTTTTAAAATCGGCAGTGGCTAGTGCCGCGGACGACTCGCCTCCTCCGCCGTCTTCGCCGTCAATGACGGTGCCGGTGCCCGTTCCGAGAGCTGAGGAGAAGACGAAAAACGAGGATGATGTGATAACGTCGAGGATTTACGACGCGACGGCGATTGGAGAGCCAATGGCGGTGGGAAAAGACAAGAGCAAGGTCTGGGAGAAGCTGATGAAGGCTAGGGTTGTGTATCTAGGCGAAGCAGAGCAGGTTCCGATTCGCGACGATAAAGAATTGGAGCTCGAAATTGTGAGGAATATGAACAAGAGGTGCTTGGTGAGTGAGAAAGCCTTGACTTTGGCTCTTGAATCTTTTCCTTGTGATCTTCAGGACCAGCTCAATCAGTACATGAACAAAAGCATAGATGGTGAAGCTTTGAAGTCATACACTTCACATTGGCCGCCGCAACGGTGGCAGGAGTATGAGCCTCTTCTAAGTTACTGCCGAGATAATGGTGTTCGGCTTGTGGCTTGTGGTACTCCACTCGCGGTCTTACGGACTGTACAAGCGGAGGGAATTCATGGGCTTTCAAAGGCTGATCGTAAAATGTATGCCCCTCCAGCAGGTTCGGGGTTCATCTCAGGCTTCACTTCGATCACAAGCAGATCACCAGTTGATAATAATTCTCCAACTCAAACTGTTCCATTTGGGCCAAGCTCATATCTATCTGCACAGGCAAGAGTGGTTGAGGATTATACCATGTCCCAGATTATTTTAAAGGCCATGGAAGGTGGAGGAGCAACTGGTATGCTAGTGGTTGTGACAGGTGCAAGCCATGTCAAGTATGGGCTTAGAGGGACAGGATTGCCAGCCAGAATTTCAAAAAAGATGCAAAAGAAAAACCAAGTAGTTATATTACTTGATCCTGAAAGACAGGACATACGGCGAGAGGGAGAAGTTCCTGTTGCTGACTTCTTGTGGTATTCTGCTGCCAGACCCTGCAATAGGAATTGTTTTGATCGTGCTGAAATTGCTCGAGTTATGAATGCAGCAGGCAGGAAAAGAGATGCCCTTCCACAGGACCTACAGAAAGGACTGGATCTTGGTTTGGTATCTCCAGAGGTATTACAGAACTTCTTTGATCTGGAGCAATATCCTCTTGTTTCGGAACTTACTCAACGGTTCCAGGGTTTCAGGGAAAGATTGTTGGTGGATCCCAAATTCTTGCATAGATTAGCTATAGAAGAATCTATATCAATAACTACTACTCTAATAGCACAATATGAGAGGCGTAAAGAAAATTTCTTTGAGGAGCTGGACTATGTGATTACGGATACTTTAAGGGGGATTGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCTCCGACGTTGTCGTTCCTTTCATATGCTGATGAAATGAATGCGCCTGATGGCATGGATGCTATTAAAGGTCTCCTTGGGTCCATTCCAGACAATGCGTTTCAGAAGAGTCTTGTGGGGCAGGATTGGAGTATCAATCATAGACTTGCATCTGTGCTTTTGGGTGGTCTAAAACTAGCTAGTGTTGGATTTATTTCCAGTATCGGGGCTGTTGCTTCCTCAAATTGTCTGTTTGCAGTTCGCAAATTCATCAATCCAGCTCTGGTTACTAATCAGCAAAAGAAAAGAACTCCAATACTTAAAACAGCAATAATCTATGGAGGCTTTCTCGGAACTTCTGCAAATCTCCGTTATCAGATTATTGCTGGACTAGTGGAGCATCGACTTTCTGATGAATTTTCTTCTCAAACAATACTTGTAAATATGCTGTCTTTTCTTTCTCGGACAATAAACTCTTATTGGGGAACTCAGCAATGGATTGATCTTGCACGCTTCACTGGACTGCAAGCTTCGAAGAGTGAACCTTCCATTTACCAAACACCGGATTCTACTATCCAGGTTGCATTGGAATGTAACAACACAGAGGAAACAAGTGTAGACGATATACAAAACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009741 GO:0009987 GO:0010033 GO:0014070 GO:0015994 GO:0015995 GO:0018130 GO:0019438 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofac_haem_bdg RETICULATA-like

Protein Analysis

758

Amino Acids

83.95

Weight (kDa)

8.54

Isoelectric Point (pI)

48.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cofac_haem_bdg	PF04187	165 - 385	4.4e-44	Haem-binding uptake, Tiki superfamily, ChaN
RETICULATA-like	PF11891	492 - 676	8.2e-61	Protein RETICULATA-related

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40400 AT2G40400 AT2G40400 AT3G56140 AT3G56140 AT3G56140
fragaria_vesca	FvH4_7g25380 FvH4_7g25380 FvH4_7g25380
malus_domestica	MD01G1160000.v1.1
prunus_persica	Prupe.2G258000_v2.0.a1
pyrus_communis	pycom01g17640
rosa_chinensis	RchiOBHm_Chr1g0371311 RchiOBHm_Chr1g0371331
rosa_laevigata	RLG00000026971
rosa_multiflora	Rmu_co8326835.1_g000001 Rmu_sc0000809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00285790
rosa_rugosa	Rorug01G0363100
rosa_samantha	Rh1AG373000 Rh1BG336500 Rh1CG349900 Rh1DG367600
rosa_wichuraiana	Rw1G032810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	535, 890
AccB1I	GGYRCC	2 cut(s)	370, 376
AccI	GTMKAC	1 cut(s)	2253
AccII	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
AclWI	GGATC	4 cut(s)	1193, 1383, 1484, 1497
AcoI	YGGCCR	2 cut(s)	238, 734
AcsI	RAATTY	7 cut(s)	181, 852, 1152, 1496, 1576, 1901, 2051
AcuI	CTGAAG	1 cut(s)	647
AcvI	CACGTG	1 cut(s)	297
AfaI	GTAC	3 cut(s)	683, 814, 840
AfeI	AGCGCT	1 cut(s)	267
AfiI	CCNNNNNNNGG	5 cut(s)	899, 1281, 1354, 1860, 2197
AgsI	TTSAA	5 cut(s)	207, 644, 715, 867, 1158
AhlI	ACTAGT	1 cut(s)	2026
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	3 cut(s)	235, 1461, 2211
Alw21I	GWGCWC	1 cut(s)	579
Alw26I	GTCTC	2 cut(s)	253, 1733
AlwI	GGATC	4 cut(s)	1193, 1383, 1484, 1497
AlwNI	CAGNNNCTG	1 cut(s)	1275
Ama87I	CYCGRG	1 cut(s)	1311
Aor51HI	AGCGCT	1 cut(s)	267
AoxI	GGCC	5 cut(s)	133, 238, 734, 986, 1056
ApeKI	GCWGC	2 cut(s)	1265, 1325
ApoI	RAATTY	7 cut(s)	181, 852, 1152, 1496, 1576, 1901, 2051
Asp700I	GAANNNNTTC	1 cut(s)	648
AspLEI	GCGC	4 cut(s)	268, 277, 289, 1702
AspS9I	GGNCC	4 cut(s)	667, 986, 1357, 1737
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	5 cut(s)	43, 63, 625, 716, 936
AsuII	TTCGAA	1 cut(s)	2168
AvaI	CYCGRG	1 cut(s)	1311
AvaII	GGWCC	3 cut(s)	667, 1357, 1737
BaeGI	GKGCMC	1 cut(s)	381
BamHI	GGATCC	1 cut(s)	1489
BanI	GGYRCC	2 cut(s)	370, 376
BanII	GRGCYC	1 cut(s)	579
BauI	CACGAG	1 cut(s)	253
BbrPI	CACGTG	1 cut(s)	297
BbsI	GAAGAC	2 cut(s)	345, 407
Bbv12I	GWGCWC	1 cut(s)	579
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	2 cut(s)	1252, 1337
BccI	CCATC	2 cut(s)	695, 1700
BceAI	ACGGC	5 cut(s)	262, 334, 343, 465, 1235
BciT130I	CCWGG	3 cut(s)	237, 1463, 2213
BciVI	GTATCC	1 cut(s)	1603
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	2 cut(s)	253, 1733
BcuI	ACTAGT	1 cut(s)	2026
BfaI	CTAG	8 cut(s)	144, 321, 516, 530, 1088, 1832, 1836, 2027
BfmI	CTRYAG	2 cut(s)	1361, 1515
BfoI	RGCGCY	2 cut(s)	269, 290
BfuAI	ACCTGC	2 cut(s)	535, 890
BfuI	GTATCC	1 cut(s)	1603
BisI	GCNGC	8 cut(s)	8, 30, 136, 327, 737, 740, 1266, 1326
BlsI	GCNGC	8 cut(s)	9, 31, 137, 328, 738, 741, 1267, 1327
Bme1390I	CCNGG	4 cut(s)	75, 237, 1463, 2213
Bme18I	GGWCC	3 cut(s)	667, 1357, 1737
BmeT110I	CYCGRG	1 cut(s)	1311
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	667, 986, 1357, 1737
BmiI	GGNNCC	6 cut(s)	372, 378, 549, 1460, 1491, 1738
BmrFI	CCNGG	4 cut(s)	75, 237, 1463, 2213
BmsI	GCATC	5 cut(s)	1155, 1333, 1705, 1814, 2044
BpiI	GAAGAC	2 cut(s)	345, 407
BplI	GAGNNNNNCTC	2 cut(s)	1968, 2000
BpmI	CTGGAG	3 cut(s)	879, 1377, 1442
Bpu10I	CCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	1 cut(s)	2168
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	297
BsaI	GGTCTC	1 cut(s)	1733
BsaJI	CCNNGG	4 cut(s)	327, 1059, 1462, 1732
BsaWI	WCCGGW	1 cut(s)	2197
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	5 cut(s)	899, 1281, 1354, 1860, 2197
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	7 cut(s)	25, 288, 947, 1084, 1377, 1854, 2158
Bse3DI	GCAATG	1 cut(s)	2135
BseBI	CCWGG	3 cut(s)	237, 1463, 2213
BseDI	CCNNGG	4 cut(s)	327, 1059, 1462, 1732
BseGI	GGATG	3 cut(s)	99, 421, 1720
BseLI	CCNNNNNNNGG	5 cut(s)	899, 1281, 1354, 1860, 2197
BseMI	GCAATG	1 cut(s)	2135
BseMII	CTCAG	3 cut(s)	384, 930, 2138
BseNI	ACTGG	7 cut(s)	25, 288, 947, 1084, 1377, 1854, 2158
BseRI	GAGGAG	7 cut(s)	48, 58, 271, 333, 410, 1086, 1601
BseSI	GKGCMC	1 cut(s)	381
BseXI	GCAGC	2 cut(s)	1252, 1337
BsgI	GTGCAG	1 cut(s)	990
Bsh1236I	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
BshFI	GGCC	5 cut(s)	135, 240, 736, 988, 1058
BshNI	GGYRCC	2 cut(s)	370, 376
BsiHKAI	GWGCWC	1 cut(s)	579
BsiHKCI	CYCGRG	1 cut(s)	1311
BsiSI	CCGG	6 cut(s)	74, 88, 112, 241, 374, 2198
BslFI	GGGAC	2 cut(s)	1024, 1147
BslI	CCNNNNNNNGG	5 cut(s)	899, 1281, 1354, 1860, 2197
BsmAI	GTCTC	2 cut(s)	253, 1733
BsmFI	GGGAC	2 cut(s)	1024, 1147
BsmI	GAATGC	2 cut(s)	1327, 1702
BsnI	GGCC	5 cut(s)	135, 240, 736, 988, 1058
Bso31I	GGTCTC	1 cut(s)	1733
BsoBI	CYCGRG	1 cut(s)	1311
Bsp119I	TTCGAA	1 cut(s)	2168
Bsp1286I	GDGCHC	2 cut(s)	381, 579
Bsp1407I	TGTACA	1 cut(s)	838
Bsp19I	CCATGG	1 cut(s)	1059
Bsp68I	TCGCGA	1 cut(s)	558
BspANI	GGCC	5 cut(s)	135, 240, 736, 988, 1058
BspCNI	CTCAG	3 cut(s)	385, 929, 2137
BspFNI	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
BspLI	GGNNCC	6 cut(s)	372, 378, 549, 1460, 1491, 1738
BspMI	ACCTGC	2 cut(s)	535, 890
BspPI	GGATC	4 cut(s)	1193, 1383, 1484, 1497
BspT104I	TTCGAA	1 cut(s)	2168
BspT107I	GGYRCC	2 cut(s)	370, 376
BspTNI	GGTCTC	1 cut(s)	1733
BsrDI	GCAATG	1 cut(s)	2135
BsrFI	RCCGGY	1 cut(s)	373
BsrGI	TGTACA	1 cut(s)	838
BsrI	ACTGG	7 cut(s)	25, 288, 947, 1084, 1377, 1854, 2158
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	4 cut(s)	327, 1059, 1462, 1732
BssSI	CACGAG	1 cut(s)	253
BssT1I	CCWWGG	2 cut(s)	1059, 1732
Bst2BI	CACGAG	1 cut(s)	253
Bst2UI	CCWGG	3 cut(s)	237, 1463, 2213
Bst4CI	ACNGT	6 cut(s)	370, 747, 838, 976, 1458, 1645
Bst6I	CTCTTC	3 cut(s)	771, 1757, 2165
BstAUI	TGTACA	1 cut(s)	838
BstBAI	YACGTR	1 cut(s)	297
BstBI	TTCGAA	1 cut(s)	2168
BstC8I	GCNNGC	5 cut(s)	1108, 1146, 1330, 2146, 2163
BstDEI	CTNAG	5 cut(s)	393, 770, 916, 1127, 2124
BstDSI	CCRYGG	2 cut(s)	327, 1059
BstENI	CCTNNNNNAGG	3 cut(s)	897, 1279, 1352
BstF5I	GGATG	3 cut(s)	99, 421, 1720
BstFNI	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
BstH2I	RGCGCY	2 cut(s)	269, 290
BstHHI	GCGC	4 cut(s)	268, 277, 289, 1702
BstMAI	GTCTC	2 cut(s)	253, 1733
BstMWI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 326, 346, 355, 748, 896, 1307
BstNI	CCWGG	3 cut(s)	237, 1463, 2213
BstSCI	CCNGG	4 cut(s)	73, 235, 1461, 2211
BstSFI	CTRYAG	2 cut(s)	1361, 1515
BstSLI	GKGCMC	1 cut(s)	381
BstUI	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
BstV1I	GCAGC	2 cut(s)	1252, 1337
BstV2I	GAAGAC	2 cut(s)	345, 407
BstX2I	RGATCY	2 cut(s)	1375, 1489
BstYI	RGATCY	2 cut(s)	1375, 1489
BsuI	GTATCC	1 cut(s)	1603
BsuRI	GGCC	5 cut(s)	135, 240, 736, 988, 1058
BtgI	CCRYGG	2 cut(s)	327, 1059
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	3 cut(s)	99, 421, 1720
BtsI	GCAGTG	1 cut(s)	321
BtsIMutI	CAGTG	5 cut(s)	18, 281, 321, 1650, 2151
BtuMI	TCGCGA	1 cut(s)	558
BveI	ACCTGC	2 cut(s)	535, 890
Cac8I	GCNNGC	5 cut(s)	1108, 1146, 1330, 2146, 2163
CaiI	CAGNNNCTG	1 cut(s)	1275
CfoI	GCGC	4 cut(s)	268, 277, 289, 1702
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	4 cut(s)	667, 986, 1357, 1737
Cfr42I	CCGCGG	1 cut(s)	330
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	3 cut(s)	682, 813, 839
CspCI	CAANNNNNGTGG	2 cut(s)	453, 488
CviAII	CATG	6 cut(s)	685, 857, 1036, 1060, 1112, 1711
CviQI	GTAC	3 cut(s)	682, 813, 839
DdeI	CTNAG	5 cut(s)	393, 770, 916, 1127, 2124
DraI	TTTAAA	2 cut(s)	306, 1053
EaeI	YGGCCR	2 cut(s)	238, 734
Eam1104I	CTCTTC	3 cut(s)	771, 1757, 2165
EarI	CTCTTC	3 cut(s)	771, 1757, 2165
EciI	GGCGGA	1 cut(s)	336
Ecl136II	GAGCTC	1 cut(s)	577
Eco130I	CCWWGG	2 cut(s)	1059, 1732
Eco24I	GRGCYC	1 cut(s)	579
Eco31I	GGTCTC	1 cut(s)	1733
Eco47I	GGWCC	3 cut(s)	667, 1357, 1737
Eco47III	AGCGCT	1 cut(s)	267
Eco53kI	GAGCTC	1 cut(s)	577
Eco57I	CTGAAG	1 cut(s)	647
Eco72I	CACGTG	1 cut(s)	297
Eco88I	CYCGRG	1 cut(s)	1311
EcoICRI	GAGCTC	1 cut(s)	577
EcoNI	CCTNNNNNAGG	3 cut(s)	897, 1279, 1352
EcoO109I	RGGNCCY	1 cut(s)	1357
EcoRI	GAATTC	2 cut(s)	181, 852
EcoRII	CCWGG	3 cut(s)	235, 1461, 2211
EcoT14I	CCWWGG	2 cut(s)	1059, 1732
EcoT38I	GRGCYC	1 cut(s)	579
ErhI	CCWWGG	2 cut(s)	1059, 1732
FaeI	CATG	6 cut(s)	688, 860, 1039, 1063, 1115, 1714
FalI	AAGNNNNNCTT	4 cut(s)	593, 625, 1716, 1748
FaqI	GGGAC	2 cut(s)	1024, 1147
FatI	CATG	6 cut(s)	684, 856, 1035, 1059, 1111, 1710
FauNDI	CATATG	1 cut(s)	1681
FblI	GTMKAC	1 cut(s)	2253
Fnu4HI	GCNGC	8 cut(s)	8, 30, 136, 327, 737, 740, 1266, 1326
FokI	GGATG	3 cut(s)	86, 428, 1727
FriOI	GRGCYC	1 cut(s)	579
Fsp4HI	GCNGC	8 cut(s)	8, 30, 136, 327, 737, 740, 1266, 1326
FspBI	CTAG	8 cut(s)	144, 321, 516, 530, 1088, 1832, 1836, 2027
GlaI	GCGC	4 cut(s)	267, 276, 288, 1701
GluI	GCNGC	8 cut(s)	8, 30, 136, 327, 737, 740, 1266, 1326
GsuI	CTGGAG	3 cut(s)	879, 1377, 1442
HaeII	RGCGCY	2 cut(s)	269, 290
HaeIII	GGCC	5 cut(s)	135, 240, 736, 988, 1058
HapII	CCGG	6 cut(s)	74, 88, 112, 241, 374, 2198
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	4 cut(s)	268, 277, 289, 1702
Hin1II	CATG	6 cut(s)	688, 860, 1039, 1063, 1115, 1714
Hin6I	GCGC	4 cut(s)	266, 275, 287, 1700
HinP1I	GCGC	4 cut(s)	266, 275, 287, 1700
HindIII	AAGCTT	2 cut(s)	708, 2163
HinfI	GANTC	8 cut(s)	78, 203, 335, 553, 644, 1523, 1765, 2201
HpaII	CCGG	6 cut(s)	74, 88, 112, 241, 374, 2198
HphI	GGTGA	5 cut(s)	43, 63, 625, 716, 936
Hpy166II	GTNNAC	3 cut(s)	41, 2177, 2254
Hpy188III	TCNNGA	8 cut(s)	253, 557, 641, 665, 1202, 1394, 1421, 1745
Hpy8I	GTNNAC	3 cut(s)	41, 2177, 2254
Hpy99I	CGWCG	6 cut(s)	168, 433, 446, 451, 563, 1666
HpyAV	CCTTC	5 cut(s)	183, 505, 1058, 1358, 2190
HpyCH4III	ACNGT	6 cut(s)	370, 747, 838, 976, 1458, 1645
HpyCH4IV	ACGT	5 cut(s)	48, 105, 296, 428, 1664
HpyF10VI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 326, 346, 355, 748, 896, 1307
HpyF3I	CTNAG	5 cut(s)	393, 770, 916, 1127, 2124
HpySE526I	ACGT	5 cut(s)	48, 105, 296, 428, 1664
Hsp92II	CATG	6 cut(s)	688, 860, 1039, 1063, 1115, 1714
HspAI	GCGC	4 cut(s)	266, 275, 287, 1700
KspI	CCGCGG	1 cut(s)	330
LmnI	GCTCC	6 cut(s)	574, 1073, 1423, 1588, 1663, 2032
Lsp1109I	GCAGC	2 cut(s)	1252, 1337
LweI	GCATC	5 cut(s)	1155, 1333, 1705, 1814, 2044
MaeI	CTAG	8 cut(s)	144, 321, 516, 530, 1088, 1832, 1836, 2027
MaeII	ACGT	5 cut(s)	48, 105, 296, 428, 1664
MaeIII	GTNAC	6 cut(s)	49, 279, 773, 1096, 1921, 2228
MboII	GAAGA	8 cut(s)	345, 412, 653, 758, 1532, 1774, 2049, 2182
MflI	RGATCY	2 cut(s)	1375, 1489
MhlI	GDGCHC	2 cut(s)	381, 579
MlyI	GAGTC	2 cut(s)	329, 1774
MmeI	TCCRAC	3 cut(s)	989, 1685, 1822
MroXI	GAANNNNTTC	1 cut(s)	648
MseI	TTAA	6 cut(s)	15, 305, 1052, 1616, 1722, 1956
MslI	CAYNNNNRTG	1 cut(s)	2224
MspA1I	CMGCKG	1 cut(s)	329
MspI	CCGG	6 cut(s)	74, 88, 112, 241, 374, 2198
MspR9I	CCNGG	4 cut(s)	75, 237, 1463, 2213
Mva1269I	GAATGC	2 cut(s)	1327, 1702
MvaI	CCWGG	3 cut(s)	237, 1463, 2213
MvnI	CGCG	7 cut(s)	32, 179, 275, 329, 446, 558, 824
MwoI	GCNNNNNNNGC	9 cut(s)	144, 272, 274, 326, 346, 355, 748, 896, 1307
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	1 cut(s)	1059
NdeI	CATATG	1 cut(s)	1681
NlaIII	CATG	6 cut(s)	688, 860, 1039, 1063, 1115, 1714
NlaIV	GGNNCC	6 cut(s)	372, 378, 549, 1460, 1491, 1738
NmeAIII	GCCGAG	2 cut(s)	270, 806
NmuCI	GTSAC	3 cut(s)	49, 279, 1096
NruI	TCGCGA	1 cut(s)	558
NspV	TTCGAA	1 cut(s)	2168
PaeR7I	CTCGAG	1 cut(s)	1311
PctI	GAATGC	2 cut(s)	1327, 1702
PdmI	GAANNNNTTC	1 cut(s)	648
PfeI	GAWTC	6 cut(s)	78, 203, 553, 644, 1523, 2201
PflFI	GACNNNGTC	1 cut(s)	1666
PkrI	GCNGC	8 cut(s)	9, 31, 137, 328, 738, 741, 1267, 1327
PleI	GAGTC	2 cut(s)	329, 1773
PmaCI	CACGTG	1 cut(s)	297
PmlI	CACGTG	1 cut(s)	297
PpsI	GAGTC	2 cut(s)	329, 1773
Ppu21I	YACGTR	1 cut(s)	297
PpuMI	RGGWCCY	1 cut(s)	1357
Psp124BI	GAGCTC	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	1357
Psp6I	CCWGG	3 cut(s)	235, 1461, 2211
PspCI	CACGTG	1 cut(s)	297
PspGI	CCWGG	3 cut(s)	235, 1461, 2211
PspN4I	GGNNCC	6 cut(s)	372, 378, 549, 1460, 1491, 1738
PspPI	GGNCC	4 cut(s)	667, 986, 1357, 1737
PspPPI	RGGWCCY	1 cut(s)	1357
PspXI	VCTCGAGB	1 cut(s)	1311
PstNI	CAGNNNCTG	1 cut(s)	1275
PsuI	RGATCY	2 cut(s)	1375, 1489
PsyI	GACNNNGTC	1 cut(s)	1666
RruI	TCGCGA	1 cut(s)	558
RsaI	GTAC	3 cut(s)	683, 814, 840
RsaNI	GTAC	3 cut(s)	682, 813, 839
RseI	CAYNNNNRTG	1 cut(s)	2224
SacI	GAGCTC	1 cut(s)	579
SacII	CCGCGG	1 cut(s)	330
SaqAI	TTAA	6 cut(s)	15, 305, 1052, 1616, 1722, 1956
SatI	GCNGC	8 cut(s)	8, 30, 136, 327, 737, 740, 1266, 1326
Sau96I	GGNCC	4 cut(s)	667, 986, 1357, 1737
SchI	GAGTC	2 cut(s)	329, 1774
ScrFI	CCNGG	4 cut(s)	75, 237, 1463, 2213
SduI	GDGCHC	2 cut(s)	381, 579
SfaNI	GCATC	5 cut(s)	1155, 1333, 1705, 1814, 2044
SfcI	CTRYAG	2 cut(s)	1361, 1515
Sfr274I	CTCGAG	1 cut(s)	1311
Sfr303I	CCGCGG	1 cut(s)	330
SfuI	TTCGAA	1 cut(s)	2168
SgrBI	CCGCGG	1 cut(s)	330
SinI	GGWCC	3 cut(s)	667, 1357, 1737
SlaI	CTCGAG	1 cut(s)	1311
SmiMI	CAYNNNNRTG	1 cut(s)	2224
SmlI	CTYRAG	1 cut(s)	1311
SmoI	CTYRAG	1 cut(s)	1311
SpeI	ACTAGT	1 cut(s)	2026
SspMI	CTAG	8 cut(s)	144, 321, 516, 530, 1088, 1832, 1836, 2027
SstI	GAGCTC	1 cut(s)	579
StyD4I	CCNGG	4 cut(s)	73, 235, 1461, 2211
StyI	CCWWGG	2 cut(s)	1059, 1732
TaaI	ACNGT	6 cut(s)	370, 747, 838, 976, 1458, 1645
TaiI	ACGT	5 cut(s)	51, 108, 299, 431, 1667
TaqI	TCGA	6 cut(s)	431, 579, 929, 1312, 2038, 2168
TatI	WGTACW	2 cut(s)	681, 838
TauI	GCSGC	6 cut(s)	10, 32, 138, 329, 739, 742
TfiI	GAWTC	6 cut(s)	78, 203, 553, 644, 1523, 2201
Tru1I	TTAA	6 cut(s)	15, 305, 1052, 1616, 1722, 1956
Tru9I	TTAA	6 cut(s)	15, 305, 1052, 1616, 1722, 1956
TscAI	CASTG	5 cut(s)	25, 288, 321, 1650, 2158
TseFI	GTSAC	3 cut(s)	49, 279, 1096
TseI	GCWGC	2 cut(s)	1265, 1325
Tsp45I	GTSAC	3 cut(s)	49, 279, 1096
TspGWI	ACGGA	5 cut(s)	142, 152, 847, 1622, 1994
TspRI	CASTG	5 cut(s)	25, 288, 321, 1650, 2158
Tth111I	GACNNNGTC	1 cut(s)	1666
VpaK11BI	GGWCC	3 cut(s)	667, 1357, 1737
XagI	CCTNNNNNAGG	3 cut(s)	897, 1279, 1352
XapI	RAATTY	7 cut(s)	181, 852, 1152, 1496, 1576, 1901, 2051
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1118
XhoI	CTCGAG	1 cut(s)	1311
XmiI	GTMKAC	1 cut(s)	2253
XmnI	GAANNNNTTC	1 cut(s)	648
XspI	CTAG	8 cut(s)	144, 321, 516, 530, 1088, 1832, 1836, 2027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.