Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007839

Physical Location & Seq

Genomic Coordinates Reverse (-)

6971420 .. 6975668

Gene Structure 4249 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00285790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCGGTGGGAAAAGACAAGAGCAAGGTCTGGGAGAAGCTGATGAAGGCTAGGGTTGTGTATCTAGGCGAAGCAGAGCAGGTTCCAATTCGCGACGATAAAGAATTGGAGCTCGAAATTGTGAGGAATATGAACAAGAGGTGCTTGGAGAGTGAGAAAGCCTTGGCTTTGGCTCTTGAATCTTTTCCTTGTGATCTTCAGGACCAGCTTAATCAGTACATGAACAAAAGCATAGATGGTGAAGCTCTGAAGTCATACACTTCACATTGGCCGCTGCAACGGTGGCAGGAGTATGAGCCTCTTCTAAGTTACTGCCGAGATAATGGTGTTCGGCTTGTGGCTTGTGGTACTCCACTCGCGGTCTTACGGACTGTACAAGCGGAGGGAATTCGTGGGCTTTCAAAGTCTGATCGTAAAATGTATGCCCCTCCAGCAGGTTCGGGGTTCATCTCAGGCTTCACTTCGATCACACGCAGATCACCAGTTGATAGTAATTCTCTGACTCAAACTGTTCCATTTGGGCCAAGCTCATATCTATCTGCACAGGCAAGAGTGGTTGAGGATTATACCATGTCCCAGATTATGTTAAAGGCCATGGAAGGTGGAGGAGCAACTGGTATGCTAGTGGTTGTGACAGGTGCAAGCCATGTCAAGTATGGGCTTAGAGGGACAGGATTGCCGGCCAGAATTTCAAAAAAGATGCAAAAGAAAAACCAAGTAGTTATATTACTTGATCCTGAAAGACAGGACATACGGCGAGAGGGAGAAGTTCCTGTTGCTGATTTCTTGTGGTATTCTGCTGCCAGGCCCTGCAATAGGAATTGTTTTGATCGTGCTGAAATTGCTCGAGTTATGAATGCAGCAGGCAGGACAAGAGATGCCCTTCCACAGGACCTTCAGAAAGGACTGGATCTTGGTTTGGTATCTCCAGAGGTATTACAGAACTTCTTTGATCTGGAGCAATATCCTCTGGTTTCAGAACTTACTCAACGGTTCCAGGGTTTCAGGGAAAGATTGTTGGTAGATCCCAAATTCTTGCACAGATTAGCTATAGAAGAATCTATCTCAATAACTACTACTCTAATAGCACAATATGAGAGGCGTAAAGAAAATTTCTTTGAGGAGCTGGACTACGTGATTACGGATACTTTAAGGGGGATTGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCTCCGACGTTGTCGTTCCTTTCATATGCTGATGAAATGAATGCGCCTGATAGCATGGATGCTATTAAAGGTCTCCTTGGGTCCATTCCAGACAATGCGTTTCAGAAGAGTCTTGTGGGGCAGGATTGGAGTATCAATCATAGACTTGCATCTGTGCTTTTGGGTGGTCTAAAACTAGCTAGTGTTGGATTTATTTCCAGTATCGGGGCTGTTGCTTCCTCAAATTTTCTGTTTGCAGTTCGCAAATTCATCAATCCAGCTCTGGTTACTAATCAGCAAAAGAAAAGAACTCCAATACTTAAAACAGCAATAATCTATGGAGGCTTTCTCGGAACTTCCGCAAATCTCCGTTATCAGCAATGGATTGATCTTGCACGCTTCACTGGACTGCAAGCTTCGAAGAGTGAACCTTCCATTTACCAAACACCGGATTCTACTATCCAGGTTGCATTGGAATGTAACAACACAGAGGAAACAAGTGTAGACGATATGCAAAACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009741 GO:0009987 GO:0010033 GO:0014070 GO:0015994 GO:0015995 GO:0018130 GO:0019438 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cofac_haem_bdg RETICULATA-like

Protein Analysis

564

Amino Acids

63.0

Weight (kDa)

7.52

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cofac_haem_bdg	PF04187	10 - 230	1.6e-44	Haem-binding uptake, Tiki superfamily, ChaN
RETICULATA-like	PF11891	337 - 516	3.9e-58	Protein RETICULATA-related

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40400 AT2G40400 AT2G40400 AT3G56140 AT3G56140 AT3G56140
fragaria_vesca	FvH4_7g25380 FvH4_7g25380 FvH4_7g25380
malus_domestica	MD01G1160000.v1.1
prunus_persica	Prupe.2G258000_v2.0.a1
pyrus_communis	pycom01g17640
rosa_chinensis	RchiOBHm_Chr1g0371311 RchiOBHm_Chr1g0371331
rosa_laevigata	RLG00000026971
rosa_multiflora	Rmu_co8326835.1_g000001 Rmu_sc0000809.1_g000039
rosa_roxburghii	Rroxscaffold_4G00285790
rosa_rugosa	Rorug01G0363100
rosa_samantha	Rh1AG373000 Rh1BG336500 Rh1CG349900 Rh1DG367600
rosa_wichuraiana	Rw1G032810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	70, 425
AccI	GTMKAC	1 cut(s)	1674
AccII	CGCG	2 cut(s)	93, 359
AciI	CCGC	5 cut(s)	5, 272, 359, 380, 1530
AclWI	GGATC	3 cut(s)	728, 918, 1019
AcoI	YGGCCR	2 cut(s)	269, 681
AcsI	RAATTY	6 cut(s)	387, 687, 1031, 1111, 1414, 1436
AcuI	CTGAAG	3 cut(s)	182, 269, 881
AfaI	GTAC	3 cut(s)	218, 349, 375
AfiI	CCNNNNNNNGG	5 cut(s)	434, 816, 889, 1395, 1618
AgsI	TTSAA	3 cut(s)	179, 402, 693
AjnI	CCWGG	3 cut(s)	803, 996, 1632
Alw21I	GWGCWC	1 cut(s)	114
Alw26I	GTCTC	1 cut(s)	1268
AlwI	GGATC	3 cut(s)	728, 918, 1019
AlwNI	CAGNNNCTG	1 cut(s)	810
Ama87I	CYCGRG	1 cut(s)	846
AoxI	GGCC	5 cut(s)	269, 521, 591, 681, 806
ApeKI	GCWGC	3 cut(s)	274, 800, 860
ApoI	RAATTY	6 cut(s)	387, 687, 1031, 1111, 1414, 1436
Asp700I	GAANNNNTTC	1 cut(s)	183
AspLEI	GCGC	1 cut(s)	1237
AspS9I	GGNCC	5 cut(s)	202, 521, 807, 892, 1272
AsuHPI	GGTGA	2 cut(s)	251, 471
AsuII	TTCGAA	1 cut(s)	1589
AvaI	CYCGRG	1 cut(s)	846
AvaII	GGWCC	3 cut(s)	202, 892, 1272
BanII	GRGCYC	1 cut(s)	114
Bbv12I	GWGCWC	1 cut(s)	114
BbvI	GCAGC	3 cut(s)	261, 787, 872
BccI	CCATC	1 cut(s)	230
BceAI	ACGGC	1 cut(s)	770
BciT130I	CCWGG	3 cut(s)	805, 998, 1634
BciVI	GTATCC	1 cut(s)	1138
BcoDI	GTCTC	1 cut(s)	1268
BfaI	CTAG	5 cut(s)	51, 65, 623, 1367, 1371
BfmI	CTRYAG	1 cut(s)	1050
BfuAI	ACCTGC	2 cut(s)	70, 425
BfuI	GTATCC	1 cut(s)	1138
BisI	GCNGC	4 cut(s)	272, 275, 801, 861
BlsI	GCNGC	4 cut(s)	273, 276, 802, 862
Bme1390I	CCNGG	3 cut(s)	805, 998, 1634
Bme18I	GGWCC	3 cut(s)	202, 892, 1272
BmeT110I	CYCGRG	1 cut(s)	846
BmgT120I	GGNCC	5 cut(s)	202, 521, 807, 892, 1272
BmiI	GGNNCC	3 cut(s)	84, 995, 1273
BmrFI	CCNGG	3 cut(s)	805, 998, 1634
BmsI	GCATC	4 cut(s)	690, 868, 1240, 1349
BplI	GAGNNNNNCTC	2 cut(s)	1503, 1535
BpmI	CTGGAG	3 cut(s)	414, 912, 977
Bpu14I	TTCGAA	1 cut(s)	1589
BsaAI	YACGTR	1 cut(s)	1135
BsaI	GGTCTC	1 cut(s)	1268
BsaJI	CCNNGG	4 cut(s)	162, 594, 997, 1267
BsaWI	WCCGGW	1 cut(s)	1618
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 816, 889, 1395, 1618
Bse118I	RCCGGY	1 cut(s)	679
Bse1I	ACTGG	5 cut(s)	482, 619, 912, 1389, 1579
Bse3DI	GCAATG	1 cut(s)	1556
BseBI	CCWGG	3 cut(s)	805, 998, 1634
BseDI	CCNNGG	4 cut(s)	162, 594, 997, 1267
BseGI	GGATG	1 cut(s)	1255
BseLI	CCNNNNNNNGG	5 cut(s)	434, 816, 889, 1395, 1618
BseMI	GCAATG	1 cut(s)	1556
BseMII	CTCAG	1 cut(s)	465
BseNI	ACTGG	5 cut(s)	482, 619, 912, 1389, 1579
BseRI	GAGGAG	2 cut(s)	621, 1136
BseXI	GCAGC	3 cut(s)	261, 787, 872
BsgI	GTGCAG	1 cut(s)	525
Bsh1236I	CGCG	2 cut(s)	93, 359
BshFI	GGCC	5 cut(s)	271, 523, 593, 683, 808
BsiHKAI	GWGCWC	1 cut(s)	114
BsiHKCI	CYCGRG	1 cut(s)	846
BsiSI	CCGG	2 cut(s)	680, 1619
BslFI	GGGAC	2 cut(s)	559, 682
BslI	CCNNNNNNNGG	5 cut(s)	434, 816, 889, 1395, 1618
BsmAI	GTCTC	1 cut(s)	1268
BsmFI	GGGAC	2 cut(s)	559, 682
BsmI	GAATGC	2 cut(s)	862, 1237
BsnI	GGCC	5 cut(s)	271, 523, 593, 683, 808
Bso31I	GGTCTC	1 cut(s)	1268
BsoBI	CYCGRG	1 cut(s)	846
Bsp119I	TTCGAA	1 cut(s)	1589
Bsp1286I	GDGCHC	1 cut(s)	114
Bsp1407I	TGTACA	1 cut(s)	373
Bsp19I	CCATGG	1 cut(s)	594
Bsp68I	TCGCGA	1 cut(s)	93
BspACI	CCGC	5 cut(s)	5, 272, 359, 380, 1530
BspANI	GGCC	5 cut(s)	271, 523, 593, 683, 808
BspCNI	CTCAG	1 cut(s)	464
BspFNI	CGCG	2 cut(s)	93, 359
BspLI	GGNNCC	3 cut(s)	84, 995, 1273
BspMI	ACCTGC	2 cut(s)	70, 425
BspPI	GGATC	3 cut(s)	728, 918, 1019
BspT104I	TTCGAA	1 cut(s)	1589
BspTNI	GGTCTC	1 cut(s)	1268
BsrDI	GCAATG	1 cut(s)	1556
BsrFI	RCCGGY	1 cut(s)	679
BsrGI	TGTACA	1 cut(s)	373
BsrI	ACTGG	5 cut(s)	482, 619, 912, 1389, 1579
BssAI	RCCGGY	1 cut(s)	679
BssECI	CCNNGG	4 cut(s)	162, 594, 997, 1267
BssT1I	CCWWGG	3 cut(s)	162, 594, 1267
Bst2UI	CCWGG	3 cut(s)	805, 998, 1634
Bst4CI	ACNGT	5 cut(s)	282, 373, 511, 993, 1180
Bst6I	CTCTTC	3 cut(s)	306, 1292, 1586
BstAUI	TGTACA	1 cut(s)	373
BstBAI	YACGTR	1 cut(s)	1135
BstBI	TTCGAA	1 cut(s)	1589
BstC8I	GCNNGC	5 cut(s)	643, 681, 865, 1567, 1584
BstDEI	CTNAG	3 cut(s)	305, 451, 662
BstDSI	CCRYGG	1 cut(s)	594
BstENI	CCTNNNNNAGG	3 cut(s)	432, 814, 887
BstF5I	GGATG	1 cut(s)	1255
BstFNI	CGCG	2 cut(s)	93, 359
BstHHI	GCGC	1 cut(s)	1237
BstMAI	GTCTC	1 cut(s)	1268
BstMWI	GCNNNNNNNGC	3 cut(s)	283, 431, 842
BstNI	CCWGG	3 cut(s)	805, 998, 1634
BstSCI	CCNGG	3 cut(s)	803, 996, 1632
BstSFI	CTRYAG	1 cut(s)	1050
BstUI	CGCG	2 cut(s)	93, 359
BstV1I	GCAGC	3 cut(s)	261, 787, 872
BstX2I	RGATCY	2 cut(s)	910, 1024
BstYI	RGATCY	2 cut(s)	910, 1024
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	5 cut(s)	271, 523, 593, 683, 808
BtgI	CCRYGG	1 cut(s)	594
BtsCI	GGATG	1 cut(s)	1255
BtsIMutI	CAGTG	2 cut(s)	1185, 1572
BtuMI	TCGCGA	1 cut(s)	93
BveI	ACCTGC	2 cut(s)	70, 425
Cac8I	GCNNGC	5 cut(s)	643, 681, 865, 1567, 1584
CaiI	CAGNNNCTG	1 cut(s)	810
CfoI	GCGC	1 cut(s)	1237
Cfr10I	RCCGGY	1 cut(s)	679
Cfr13I	GGNCC	5 cut(s)	202, 521, 807, 892, 1272
Csp6I	GTAC	3 cut(s)	217, 348, 374
CviAII	CATG	5 cut(s)	220, 571, 595, 647, 1246
CviQI	GTAC	3 cut(s)	217, 348, 374
DdeI	CTNAG	3 cut(s)	305, 451, 662
EaeI	YGGCCR	2 cut(s)	269, 681
Eam1104I	CTCTTC	3 cut(s)	306, 1292, 1586
EarI	CTCTTC	3 cut(s)	306, 1292, 1586
Ecl136II	GAGCTC	1 cut(s)	112
Eco130I	CCWWGG	3 cut(s)	162, 594, 1267
Eco24I	GRGCYC	1 cut(s)	114
Eco31I	GGTCTC	1 cut(s)	1268
Eco47I	GGWCC	3 cut(s)	202, 892, 1272
Eco53kI	GAGCTC	1 cut(s)	112
Eco57I	CTGAAG	3 cut(s)	182, 269, 881
Eco88I	CYCGRG	1 cut(s)	846
EcoICRI	GAGCTC	1 cut(s)	112
EcoNI	CCTNNNNNAGG	3 cut(s)	432, 814, 887
EcoO109I	RGGNCCY	2 cut(s)	807, 892
EcoRI	GAATTC	1 cut(s)	387
EcoRII	CCWGG	3 cut(s)	803, 996, 1632
EcoT14I	CCWWGG	3 cut(s)	162, 594, 1267
EcoT38I	GRGCYC	1 cut(s)	114
ErhI	CCWWGG	3 cut(s)	162, 594, 1267
FaeI	CATG	5 cut(s)	223, 574, 598, 650, 1249
FalI	AAGNNNNNCTT	4 cut(s)	128, 160, 1251, 1283
FaqI	GGGAC	2 cut(s)	559, 682
FatI	CATG	5 cut(s)	219, 570, 594, 646, 1245
FauNDI	CATATG	1 cut(s)	1216
FblI	GTMKAC	1 cut(s)	1674
Fnu4HI	GCNGC	4 cut(s)	272, 275, 801, 861
FokI	GGATG	1 cut(s)	1262
FriOI	GRGCYC	1 cut(s)	114
Fsp4HI	GCNGC	4 cut(s)	272, 275, 801, 861
FspBI	CTAG	5 cut(s)	51, 65, 623, 1367, 1371
GlaI	GCGC	1 cut(s)	1236
GluI	GCNGC	4 cut(s)	272, 275, 801, 861
GsuI	CTGGAG	3 cut(s)	414, 912, 977
HaeIII	GGCC	5 cut(s)	271, 523, 593, 683, 808
HapII	CCGG	2 cut(s)	680, 1619
HhaI	GCGC	1 cut(s)	1237
Hin1II	CATG	5 cut(s)	223, 574, 598, 650, 1249
Hin6I	GCGC	1 cut(s)	1235
HinP1I	GCGC	1 cut(s)	1235
HindIII	AAGCTT	1 cut(s)	1584
HinfI	GANTC	5 cut(s)	179, 502, 1058, 1300, 1622
HpaII	CCGG	2 cut(s)	680, 1619
HphI	GGTGA	2 cut(s)	251, 471
Hpy166II	GTNNAC	2 cut(s)	1598, 1675
Hpy188I	TCNGA	8 cut(s)	249, 409, 501, 900, 979, 1197, 1296, 1523
Hpy188III	TCNNGA	7 cut(s)	92, 176, 200, 737, 929, 956, 1280
Hpy8I	GTNNAC	2 cut(s)	1598, 1675
Hpy99I	CGWCG	2 cut(s)	98, 1201
HpyAV	CCTTC	5 cut(s)	40, 593, 893, 905, 1611
HpyCH4III	ACNGT	5 cut(s)	282, 373, 511, 993, 1180
HpyCH4IV	ACGT	2 cut(s)	1134, 1199
HpyF10VI	GCNNNNNNNGC	3 cut(s)	283, 431, 842
HpyF3I	CTNAG	3 cut(s)	305, 451, 662
HpySE526I	ACGT	2 cut(s)	1134, 1199
Hsp92II	CATG	5 cut(s)	223, 574, 598, 650, 1249
HspAI	GCGC	1 cut(s)	1235
KroI	GCCGGC	1 cut(s)	679
KroNI	GCCGGC	1 cut(s)	681
LmnI	GCTCC	5 cut(s)	109, 608, 958, 1123, 1198
Lsp1109I	GCAGC	3 cut(s)	261, 787, 872
LweI	GCATC	4 cut(s)	690, 868, 1240, 1349
MaeI	CTAG	5 cut(s)	51, 65, 623, 1367, 1371
MaeII	ACGT	2 cut(s)	1134, 1199
MaeIII	GTNAC	4 cut(s)	308, 631, 1456, 1649
MboII	GAAGA	5 cut(s)	188, 293, 1067, 1309, 1603
MflI	RGATCY	2 cut(s)	910, 1024
MhlI	GDGCHC	1 cut(s)	114
MlyI	GAGTC	2 cut(s)	496, 1309
MmeI	TCCRAC	2 cut(s)	1220, 1357
MroNI	GCCGGC	1 cut(s)	679
MroXI	GAANNNNTTC	1 cut(s)	183
MseI	TTAA	5 cut(s)	210, 587, 1151, 1257, 1491
MslI	CAYNNNNRTG	1 cut(s)	1645
MspA1I	CMGCKG	1 cut(s)	274
MspI	CCGG	2 cut(s)	680, 1619
MspR9I	CCNGG	3 cut(s)	805, 998, 1634
Mva1269I	GAATGC	2 cut(s)	862, 1237
MvaI	CCWGG	3 cut(s)	805, 998, 1634
MvnI	CGCG	2 cut(s)	93, 359
MwoI	GCNNNNNNNGC	3 cut(s)	283, 431, 842
NaeI	GCCGGC	1 cut(s)	681
NcoI	CCATGG	1 cut(s)	594
NdeI	CATATG	1 cut(s)	1216
NgoMIV	GCCGGC	1 cut(s)	679
NlaIII	CATG	5 cut(s)	223, 574, 598, 650, 1249
NlaIV	GGNNCC	3 cut(s)	84, 995, 1273
NmeAIII	GCCGAG	1 cut(s)	341
NmuCI	GTSAC	1 cut(s)	631
NruI	TCGCGA	1 cut(s)	93
NspV	TTCGAA	1 cut(s)	1589
PaeR7I	CTCGAG	1 cut(s)	846
PctI	GAATGC	2 cut(s)	862, 1237
PdiI	GCCGGC	1 cut(s)	681
PdmI	GAANNNNTTC	1 cut(s)	183
PfeI	GAWTC	3 cut(s)	179, 1058, 1622
PflFI	GACNNNGTC	1 cut(s)	1201
PkrI	GCNGC	4 cut(s)	273, 276, 802, 862
PleI	GAGTC	2 cut(s)	496, 1308
PpsI	GAGTC	2 cut(s)	496, 1308
Ppu21I	YACGTR	1 cut(s)	1135
PpuMI	RGGWCCY	1 cut(s)	892
Psp124BI	GAGCTC	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	892
Psp6I	CCWGG	3 cut(s)	803, 996, 1632
PspGI	CCWGG	3 cut(s)	803, 996, 1632
PspN4I	GGNNCC	3 cut(s)	84, 995, 1273
PspPI	GGNCC	5 cut(s)	202, 521, 807, 892, 1272
PspPPI	RGGWCCY	1 cut(s)	892
PspXI	VCTCGAGB	1 cut(s)	846
PstNI	CAGNNNCTG	1 cut(s)	810
PsuI	RGATCY	2 cut(s)	910, 1024
PsyI	GACNNNGTC	1 cut(s)	1201
RruI	TCGCGA	1 cut(s)	93
RsaI	GTAC	3 cut(s)	218, 349, 375
RsaNI	GTAC	3 cut(s)	217, 348, 374
RseI	CAYNNNNRTG	1 cut(s)	1645
SacI	GAGCTC	1 cut(s)	114
SaqAI	TTAA	5 cut(s)	210, 587, 1151, 1257, 1491
SatI	GCNGC	4 cut(s)	272, 275, 801, 861
Sau96I	GGNCC	5 cut(s)	202, 521, 807, 892, 1272
SchI	GAGTC	2 cut(s)	496, 1309
ScrFI	CCNGG	3 cut(s)	805, 998, 1634
SduI	GDGCHC	1 cut(s)	114
SfaNI	GCATC	4 cut(s)	690, 868, 1240, 1349
SfcI	CTRYAG	1 cut(s)	1050
Sfr274I	CTCGAG	1 cut(s)	846
SfuI	TTCGAA	1 cut(s)	1589
SinI	GGWCC	3 cut(s)	202, 892, 1272
SlaI	CTCGAG	1 cut(s)	846
SmiMI	CAYNNNNRTG	1 cut(s)	1645
SmlI	CTYRAG	1 cut(s)	846
SmoI	CTYRAG	1 cut(s)	846
SsiI	CCGC	5 cut(s)	5, 272, 359, 380, 1530
SspMI	CTAG	5 cut(s)	51, 65, 623, 1367, 1371
SstI	GAGCTC	1 cut(s)	114
StyD4I	CCNGG	3 cut(s)	803, 996, 1632
StyI	CCWWGG	3 cut(s)	162, 594, 1267
TaaI	ACNGT	5 cut(s)	282, 373, 511, 993, 1180
TaiI	ACGT	2 cut(s)	1137, 1202
TaqI	TCGA	4 cut(s)	114, 464, 847, 1589
TatI	WGTACW	2 cut(s)	216, 373
TauI	GCSGC	1 cut(s)	274
TfiI	GAWTC	3 cut(s)	179, 1058, 1622
Tru1I	TTAA	5 cut(s)	210, 587, 1151, 1257, 1491
Tru9I	TTAA	5 cut(s)	210, 587, 1151, 1257, 1491
TscAI	CASTG	2 cut(s)	1185, 1579
TseFI	GTSAC	1 cut(s)	631
TseI	GCWGC	3 cut(s)	274, 800, 860
Tsp45I	GTSAC	1 cut(s)	631
TspDTI	ATGAA	9 cut(s)	59, 146, 236, 436, 869, 1203, 1239, 1244, 1429
TspGWI	ACGGA	3 cut(s)	382, 1157, 1529
TspRI	CASTG	2 cut(s)	1185, 1579
Tth111I	GACNNNGTC	1 cut(s)	1201
VpaK11BI	GGWCC	3 cut(s)	202, 892, 1272
XagI	CCTNNNNNAGG	3 cut(s)	432, 814, 887
XapI	RAATTY	6 cut(s)	387, 687, 1031, 1111, 1414, 1436
XcmI	CCANNNNNNNNNTGG	1 cut(s)	653
XhoI	CTCGAG	1 cut(s)	846
XmiI	GTMKAC	1 cut(s)	1674
XmnI	GAANNNNTTC	1 cut(s)	183
XspI	CTAG	5 cut(s)	51, 65, 623, 1367, 1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.