DNA-(apurinic or apyrimidinic site) lyase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41460 AT2G41460 AT2G41460 AT2G41460 |
| fragaria_vesca | FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 |
| malus_domestica | MD12G1086000.v1.1 |
| prunus_persica | Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 |
| pyrus_communis | pycom12g07320 |
| rosa_chinensis | RchiOBHm_Chr3g0484531 |
| rosa_laevigata | RLG00000023226 |
| rosa_multiflora | Rmu_sc0012967.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00397730 |
| rosa_rugosa | Rorug03G0211400 Rorug03G0211500 Rorug03G0211500 |
| rosa_samantha | Rh3AG262000 Rh3BG297100 Rh3CG294400 Rh3DG290700 |
| rosa_wichuraiana | Rw3G023480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 340, 815 |
| AccB1I | GGYRCC | 3 cut(s) | 64, 340, 815 |
| AccI | GTMKAC | 1 cut(s) | 554 |
| AccII | CGCG | 1 cut(s) | 599 |
| AccIII | TCCGGA | 1 cut(s) | 1178 |
| AciI | CCGC | 4 cut(s) | 36, 1328, 1474, 1529 |
| AclI | AACGTT | 1 cut(s) | 9 |
| AclWI | GGATC | 3 cut(s) | 312, 1217, 1230 |
| AcoI | YGGCCR | 2 cut(s) | 1471, 1530 |
| AcsI | RAATTY | 3 cut(s) | 639, 913, 1136 |
| AcuI | CTGAAG | 3 cut(s) | 510, 531, 714 |
| AfaI | GTAC | 4 cut(s) | 342, 738, 817, 1090 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 327, 350, 1178 |
| AgsI | TTSAA | 7 cut(s) | 130, 272, 308, 527, 571, 871, 1321 |
| AjnI | CCWGG | 3 cut(s) | 199, 948, 1429 |
| Alw21I | GWGCWC | 2 cut(s) | 35, 1300 |
| Alw26I | GTCTC | 5 cut(s) | 29, 787, 932, 1027, 1489 |
| AlwI | GGATC | 3 cut(s) | 312, 1217, 1230 |
| Ama87I | CYCGRG | 1 cut(s) | 712 |
| Aor13HI | TCCGGA | 1 cut(s) | 1178 |
| AoxI | GGCC | 3 cut(s) | 1471, 1530, 1591 |
| ApeKI | GCWGC | 4 cut(s) | 206, 634, 895, 1017 |
| ApoI | RAATTY | 3 cut(s) | 639, 913, 1136 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1385, 1417 |
| Asp718I | GGTACC | 2 cut(s) | 340, 815 |
| AspS9I | GGNCC | 1 cut(s) | 1011 |
| AsuHPI | GGTGA | 3 cut(s) | 442, 964, 1295 |
| AvaI | CYCGRG | 1 cut(s) | 712 |
| AvaII | GGWCC | 1 cut(s) | 1011 |
| BanI | GGYRCC | 3 cut(s) | 64, 340, 815 |
| BanII | GRGCYC | 1 cut(s) | 35 |
| Bbv12I | GWGCWC | 2 cut(s) | 35, 1300 |
| BbvCI | CCTCAGC | 1 cut(s) | 1232 |
| BbvI | GCAGC | 4 cut(s) | 218, 646, 907, 1029 |
| BccI | CCATC | 6 cut(s) | 226, 461, 677, 983, 1178, 1485 |
| BciT130I | CCWGG | 3 cut(s) | 201, 950, 1431 |
| BclI | TGATCA | 4 cut(s) | 214, 409, 997, 1576 |
| BcoDI | GTCTC | 5 cut(s) | 29, 787, 932, 1027, 1489 |
| BfaI | CTAG | 1 cut(s) | 675 |
| BfmI | CTRYAG | 4 cut(s) | 153, 893, 1015, 1269 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1470, 1590 |
| BisI | GCNGC | 6 cut(s) | 207, 635, 896, 1018, 1474, 1530 |
| BlsI | GCNGC | 6 cut(s) | 208, 636, 897, 1019, 1475, 1531 |
| Bme1390I | CCNGG | 3 cut(s) | 201, 950, 1431 |
| Bme18I | GGWCC | 1 cut(s) | 1011 |
| BmeT110I | CYCGRG | 1 cut(s) | 712 |
| BmgT120I | GGNCC | 1 cut(s) | 1011 |
| BmiI | GGNNCC | 3 cut(s) | 66, 342, 817 |
| BmrFI | CCNGG | 3 cut(s) | 201, 950, 1431 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 869, 901 |
| BpmI | CTGGAG | 3 cut(s) | 11, 932, 1274 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1232 |
| BpuEI | CTTGAG | 2 cut(s) | 176, 1586 |
| BsaI | GGTCTC | 2 cut(s) | 29, 787 |
| BsaJI | CCNNGG | 2 cut(s) | 728, 1465 |
| BsaWI | WCCGGW | 1 cut(s) | 1178 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 96, 126 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 327, 350, 1178 |
| Bse1I | ACTGG | 3 cut(s) | 770, 1096, 1503 |
| Bse3DI | GCAATG | 1 cut(s) | 1579 |
| BseAI | TCCGGA | 1 cut(s) | 1178 |
| BseBI | CCWGG | 3 cut(s) | 201, 950, 1431 |
| BseDI | CCNNGG | 2 cut(s) | 728, 1465 |
| BseGI | GGATG | 4 cut(s) | 707, 1426, 1496, 1551 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 327, 350, 1178 |
| BseMI | GCAATG | 1 cut(s) | 1579 |
| BseMII | CTCAG | 5 cut(s) | 549, 770, 848, 1089, 1246 |
| BseNI | ACTGG | 3 cut(s) | 770, 1096, 1503 |
| BseXI | GCAGC | 4 cut(s) | 218, 646, 907, 1029 |
| Bsh1236I | CGCG | 1 cut(s) | 599 |
| BshFI | GGCC | 3 cut(s) | 1473, 1532, 1593 |
| BshNI | GGYRCC | 3 cut(s) | 64, 340, 815 |
| BsiHKAI | GWGCWC | 2 cut(s) | 35, 1300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 712 |
| BsiSI | CCGG | 1 cut(s) | 1179 |
| BslFI | GGGAC | 2 cut(s) | 1154, 1501 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 327, 350, 1178 |
| BsmAI | GTCTC | 5 cut(s) | 29, 787, 932, 1027, 1489 |
| BsmBI | CGTCTC | 1 cut(s) | 1027 |
| BsmFI | GGGAC | 2 cut(s) | 1154, 1501 |
| BsmI | GAATGC | 1 cut(s) | 503 |
| BsnI | GGCC | 3 cut(s) | 1473, 1532, 1593 |
| Bso31I | GGTCTC | 2 cut(s) | 29, 787 |
| BsoBI | CYCGRG | 1 cut(s) | 712 |
| Bsp1286I | GDGCHC | 2 cut(s) | 35, 1300 |
| Bsp13I | TCCGGA | 1 cut(s) | 1178 |
| Bsp19I | CCATGG | 1 cut(s) | 1465 |
| Bsp68I | TCGCGA | 1 cut(s) | 599 |
| BspACI | CCGC | 4 cut(s) | 36, 1328, 1474, 1529 |
| BspANI | GGCC | 3 cut(s) | 1473, 1532, 1593 |
| BspCNI | CTCAG | 5 cut(s) | 550, 769, 849, 1088, 1245 |
| BspEI | TCCGGA | 1 cut(s) | 1178 |
| BspFNI | CGCG | 1 cut(s) | 599 |
| BspHI | TCATGA | 2 cut(s) | 1105, 1300 |
| BspLI | GGNNCC | 3 cut(s) | 66, 342, 817 |
| BspMAI | CTGCAG | 2 cut(s) | 897, 1019 |
| BspPI | GGATC | 3 cut(s) | 312, 1217, 1230 |
| BspQI | GCTCTTC | 1 cut(s) | 474 |
| BspT107I | GGYRCC | 3 cut(s) | 64, 340, 815 |
| BspTNI | GGTCTC | 2 cut(s) | 29, 787 |
| BsrDI | GCAATG | 1 cut(s) | 1579 |
| BsrI | ACTGG | 3 cut(s) | 770, 1096, 1503 |
| BssECI | CCNNGG | 2 cut(s) | 728, 1465 |
| BssT1I | CCWWGG | 1 cut(s) | 1465 |
| Bst2UI | CCWGG | 3 cut(s) | 201, 950, 1431 |
| Bst4CI | ACNGT | 6 cut(s) | 304, 552, 729, 736, 1200, 1295 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 474 |
| BstC8I | GCNNGC | 3 cut(s) | 179, 900, 932 |
| BstDEI | CTNAG | 8 cut(s) | 71, 314, 558, 756, 857, 1075, 1232, 1263 |
| BstDSI | CCRYGG | 2 cut(s) | 728, 1465 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 348 |
| BstF5I | GGATG | 4 cut(s) | 707, 1426, 1496, 1551 |
| BstFNI | CGCG | 1 cut(s) | 599 |
| BstMAI | GTCTC | 5 cut(s) | 29, 787, 932, 1027, 1489 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1470, 1590 |
| BstNI | CCWGG | 3 cut(s) | 201, 950, 1431 |
| BstSCI | CCNGG | 3 cut(s) | 199, 948, 1429 |
| BstSFI | CTRYAG | 4 cut(s) | 153, 893, 1015, 1269 |
| BstUI | CGCG | 1 cut(s) | 599 |
| BstV1I | GCAGC | 4 cut(s) | 218, 646, 907, 1029 |
| BstX2I | RGATCY | 1 cut(s) | 317 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 58 |
| BstYI | RGATCY | 1 cut(s) | 317 |
| BsuRI | GGCC | 3 cut(s) | 1473, 1532, 1593 |
| BtgI | CCRYGG | 2 cut(s) | 728, 1465 |
| BtgZI | GCGATG | 1 cut(s) | 311 |
| BtsCI | GGATG | 4 cut(s) | 707, 1426, 1496, 1551 |
| BtuMI | TCGCGA | 1 cut(s) | 599 |
| Cac8I | GCNNGC | 3 cut(s) | 179, 900, 932 |
| CciI | TCATGA | 2 cut(s) | 1105, 1300 |
| Cfr13I | GGNCC | 1 cut(s) | 1011 |
| CseI | GACGC | 2 cut(s) | 363, 1009 |
| Csp6I | GTAC | 4 cut(s) | 341, 737, 816, 1089 |
| CviAII | CATG | 4 cut(s) | 1106, 1301, 1466, 1541 |
| CviQI | GTAC | 4 cut(s) | 341, 737, 816, 1089 |
| DdeI | CTNAG | 8 cut(s) | 71, 314, 558, 756, 857, 1075, 1232, 1263 |
| EaeI | YGGCCR | 2 cut(s) | 1471, 1530 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 474 |
| EarI | CTCTTC | 2 cut(s) | 273, 474 |
| EciI | GGCGGA | 1 cut(s) | 25 |
| Ecl136II | GAGCTC | 1 cut(s) | 33 |
| Eco130I | CCWWGG | 1 cut(s) | 1465 |
| Eco24I | GRGCYC | 1 cut(s) | 35 |
| Eco31I | GGTCTC | 2 cut(s) | 29, 787 |
| Eco32I | GATATC | 1 cut(s) | 1564 |
| Eco47I | GGWCC | 1 cut(s) | 1011 |
| Eco53kI | GAGCTC | 1 cut(s) | 33 |
| Eco57I | CTGAAG | 3 cut(s) | 510, 531, 714 |
| Eco88I | CYCGRG | 1 cut(s) | 712 |
| EcoICRI | GAGCTC | 1 cut(s) | 33 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 348 |
| EcoRI | GAATTC | 1 cut(s) | 1136 |
| EcoRII | CCWGG | 3 cut(s) | 199, 948, 1429 |
| EcoRV | GATATC | 1 cut(s) | 1564 |
| EcoT14I | CCWWGG | 1 cut(s) | 1465 |
| EcoT38I | GRGCYC | 1 cut(s) | 35 |
| ErhI | CCWWGG | 1 cut(s) | 1465 |
| Esp3I | CGTCTC | 1 cut(s) | 1027 |
| FaeI | CATG | 4 cut(s) | 1109, 1304, 1469, 1544 |
| FaqI | GGGAC | 2 cut(s) | 1154, 1501 |
| FatI | CATG | 4 cut(s) | 1105, 1300, 1465, 1540 |
| FauI | CCCGC | 1 cut(s) | 1321 |
| FauNDI | CATATG | 1 cut(s) | 390 |
| FbaI | TGATCA | 4 cut(s) | 214, 409, 997, 1576 |
| FblI | GTMKAC | 1 cut(s) | 554 |
| Fnu4HI | GCNGC | 6 cut(s) | 207, 635, 896, 1018, 1474, 1530 |
| FokI | GGATG | 4 cut(s) | 694, 1413, 1503, 1538 |
| FriOI | GRGCYC | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 6 cut(s) | 207, 635, 896, 1018, 1474, 1530 |
| FspBI | CTAG | 1 cut(s) | 675 |
| GluI | GCNGC | 6 cut(s) | 207, 635, 896, 1018, 1474, 1530 |
| GsuI | CTGGAG | 3 cut(s) | 11, 932, 1274 |
| HaeIII | GGCC | 3 cut(s) | 1473, 1532, 1593 |
| HapII | CCGG | 1 cut(s) | 1179 |
| HgaI | GACGC | 2 cut(s) | 363, 1009 |
| Hin1II | CATG | 4 cut(s) | 1109, 1304, 1469, 1544 |
| HindIII | AAGCTT | 2 cut(s) | 513, 771 |
| HinfI | GANTC | 3 cut(s) | 715, 1142, 1544 |
| HpaII | CCGG | 1 cut(s) | 1179 |
| HphI | GGTGA | 3 cut(s) | 442, 964, 1295 |
| Hpy166II | GTNNAC | 4 cut(s) | 432, 555, 725, 732 |
| Hpy188I | TCNGA | 6 cut(s) | 219, 231, 442, 511, 759, 1610 |
| Hpy8I | GTNNAC | 4 cut(s) | 432, 555, 725, 732 |
| HpyAV | CCTTC | 3 cut(s) | 754, 1109, 1156 |
| HpyCH4III | ACNGT | 6 cut(s) | 304, 552, 729, 736, 1200, 1295 |
| HpyCH4IV | ACGT | 2 cut(s) | 9, 323 |
| HpyCH4V | TGCA | 6 cut(s) | 501, 895, 934, 1017, 1049, 1382 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1470, 1590 |
| HpyF3I | CTNAG | 8 cut(s) | 71, 314, 558, 756, 857, 1075, 1232, 1263 |
| HpySE526I | ACGT | 2 cut(s) | 9, 323 |
| Hsp92II | CATG | 4 cut(s) | 1109, 1304, 1469, 1544 |
| Kpn2I | TCCGGA | 1 cut(s) | 1178 |
| KpnI | GGTACC | 2 cut(s) | 344, 819 |
| Ksp22I | TGATCA | 4 cut(s) | 214, 409, 997, 1576 |
| LguI | GCTCTTC | 1 cut(s) | 474 |
| LmnI | GCTCC | 2 cut(s) | 38, 203 |
| Lsp1109I | GCAGC | 4 cut(s) | 218, 646, 907, 1029 |
| MaeI | CTAG | 1 cut(s) | 675 |
| MaeII | ACGT | 2 cut(s) | 9, 323 |
| MaeIII | GTNAC | 3 cut(s) | 448, 1126, 1442 |
| MfeI | CAATTG | 1 cut(s) | 1524 |
| MflI | RGATCY | 1 cut(s) | 317 |
| MhlI | GDGCHC | 2 cut(s) | 35, 1300 |
| MlyI | GAGTC | 2 cut(s) | 724, 1136 |
| MmeI | TCCRAC | 2 cut(s) | 82, 88 |
| MroI | TCCGGA | 1 cut(s) | 1178 |
| MseI | TTAA | 3 cut(s) | 849, 972, 1190 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1431 |
| MspI | CCGG | 1 cut(s) | 1179 |
| MspR9I | CCNGG | 3 cut(s) | 201, 950, 1431 |
| MunI | CAATTG | 1 cut(s) | 1524 |
| Mva1269I | GAATGC | 1 cut(s) | 503 |
| MvaI | CCWGG | 3 cut(s) | 201, 950, 1431 |
| MvnI | CGCG | 1 cut(s) | 599 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1470, 1590 |
| NcoI | CCATGG | 1 cut(s) | 1465 |
| NdeI | CATATG | 1 cut(s) | 390 |
| NlaIII | CATG | 4 cut(s) | 1109, 1304, 1469, 1544 |
| NlaIV | GGNNCC | 3 cut(s) | 66, 342, 817 |
| NmuCI | GTSAC | 1 cut(s) | 448 |
| NruI | TCGCGA | 1 cut(s) | 599 |
| PagI | TCATGA | 2 cut(s) | 1105, 1300 |
| PciSI | GCTCTTC | 1 cut(s) | 474 |
| PctI | GAATGC | 1 cut(s) | 503 |
| PfeI | GAWTC | 1 cut(s) | 1544 |
| PkrI | GCNGC | 6 cut(s) | 208, 636, 897, 1019, 1475, 1531 |
| PleI | GAGTC | 2 cut(s) | 723, 1136 |
| PpsI | GAGTC | 2 cut(s) | 723, 1136 |
| Psp124BI | GAGCTC | 1 cut(s) | 35 |
| Psp1406I | AACGTT | 1 cut(s) | 9 |
| Psp6I | CCWGG | 3 cut(s) | 199, 948, 1429 |
| PspGI | CCWGG | 3 cut(s) | 199, 948, 1429 |
| PspN4I | GGNNCC | 3 cut(s) | 66, 342, 817 |
| PspPI | GGNCC | 1 cut(s) | 1011 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 180, 212 |
| PstI | CTGCAG | 2 cut(s) | 897, 1019 |
| PsuI | RGATCY | 1 cut(s) | 317 |
| RruI | TCGCGA | 1 cut(s) | 599 |
| RsaI | GTAC | 4 cut(s) | 342, 738, 817, 1090 |
| RsaNI | GTAC | 4 cut(s) | 341, 737, 816, 1089 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1431 |
| SacI | GAGCTC | 1 cut(s) | 35 |
| SapI | GCTCTTC | 1 cut(s) | 474 |
| SaqAI | TTAA | 3 cut(s) | 849, 972, 1190 |
| SatI | GCNGC | 6 cut(s) | 207, 635, 896, 1018, 1474, 1530 |
| Sau96I | GGNCC | 1 cut(s) | 1011 |
| SchI | GAGTC | 2 cut(s) | 724, 1136 |
| ScrFI | CCNGG | 3 cut(s) | 201, 950, 1431 |
| SduI | GDGCHC | 2 cut(s) | 35, 1300 |
| SfcI | CTRYAG | 4 cut(s) | 153, 893, 1015, 1269 |
| SinI | GGWCC | 1 cut(s) | 1011 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1431 |
| SmlI | CTYRAG | 2 cut(s) | 191, 1601 |
| SmoI | CTYRAG | 2 cut(s) | 191, 1601 |
| SsiI | CCGC | 4 cut(s) | 36, 1328, 1474, 1529 |
| SspMI | CTAG | 1 cut(s) | 675 |
| SstI | GAGCTC | 1 cut(s) | 35 |
| StyD4I | CCNGG | 3 cut(s) | 199, 948, 1429 |
| StyI | CCWWGG | 1 cut(s) | 1465 |
| TaaI | ACNGT | 6 cut(s) | 304, 552, 729, 736, 1200, 1295 |
| TaiI | ACGT | 2 cut(s) | 12, 326 |
| TaqI | TCGA | 5 cut(s) | 280, 665, 1140, 1212, 1225 |
| TatI | WGTACW | 1 cut(s) | 736 |
| TauI | GCSGC | 2 cut(s) | 1476, 1532 |
| TfiI | GAWTC | 1 cut(s) | 1544 |
| Tru1I | TTAA | 3 cut(s) | 849, 972, 1190 |
| Tru9I | TTAA | 3 cut(s) | 849, 972, 1190 |
| TseFI | GTSAC | 1 cut(s) | 448 |
| TseI | GCWGC | 4 cut(s) | 206, 634, 895, 1017 |
| Tsp45I | GTSAC | 1 cut(s) | 448 |
| TspDTI | ATGAA | 6 cut(s) | 17, 81, 270, 377, 510, 1317 |
| TspGWI | ACGGA | 3 cut(s) | 546, 1075, 1127 |
| VpaK11BI | GGWCC | 1 cut(s) | 1011 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 348 |
| XapI | RAATTY | 3 cut(s) | 639, 913, 1136 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 58 |
| XmiI | GTMKAC | 1 cut(s) | 554 |
| XspI | CTAG | 1 cut(s) | 675 |