Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0003775

Physical Location & Seq

Genomic Coordinates Reverse (-)

30019951 .. 30024967

Gene Structure 5017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG290700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGAATCAAATCCAATCACTGCAATTAGGGTTCAAGAGTTTCCTCAGTCTCACCAGCTTTACAGTTGCTCCCAGGAATCTTAGAAGTGGAGTGCTTAGAGTAAAAGCAACAACAGCGAGACCCATTTCGAGTTCAACAAAGAAGCCCGCGCTCAAAGCAGCAATGGGAGCAAACCCCACTGTTATCAAGGAGATTGAGAGTTTGAAAGGTGACCTCTCTAAGATTGAGGCAATGACAGTTGAACAACTCAGGACAACACTGAGGAATATTGGGGCCTCTGCCAAAGGTCGAAAATGCGAACTTGTGTCTTCATTGAAGTGCTTTCTGGAAAATAAGATAGATGGTGAAAGTTCCCAGGTAATAGAACAGCAAATATCCTCCACCATTTGTGTTGAAACTGTATCAGCCAAAACTGAGACCGAACCTTTATCTAATGAAGACCAAATTCAGAATGTCAACACTGTTTCCGATGTTCAATTACGTCAACGGAATAAGCGAACGTCATCGTCTAAGAGTAAAACTGTCGATGGTGATGATAAGGTTGTAAAGAAAGAGAAGCTATTAATTGAATCAGATGAAGTTTCAGTTGGAAACCTCTCAAGGACAAGGAGGAAAGTATCTCCAAAAGCTGCGAGTATTACCGTCAAAACCGACGATAAGGTAGCTGAACCATGGACGGTTCTTGCGCACAAGAAACCTCAGAAAGATTGGATTCCTTATAATCCTAAAACCATGAGGCCCTCAGAGCTTACTAGGGAGACTAAATTTATGAAGCTTATGTCGTGGAATGTCAATGGTTTAAGGGCATTATTGAAGTTAGAGGGATTCTCTGCTTTGCAACTTGCTGAAAGAGAAGATTTTGATGTATTATGTCTGCAGGAGACCAAATTGCAGGAGAAGGATGTTGAAGATGTGAAGAGGTCTCTCATAGACGGCTATGAGAATAGCTTCTGGACATGTAGTGTTTCCAAGCTCGGTTACTCGGGAACTGCGATTATCTCCCGAGTAAAGCCACTTTCAGTTAGCTATGGACTTGGCATGTCAGATCATGATAGCGAGGGGCGGATTGTAACAGTAGAGTTTGATTCATTTTACCTGATAAGTGGATATGTTCCTAATTCTGGAGATGGTTTGAGGAGACTGACATACAGGATTACAGAATGGGATCCATCTCTCGGTAATTACATGAAAGAGCTGGAAAAGTCAAAGCCGGTAATTTTAACTGGTGATTTGAACTGTGCGCATCAAGAGATAGACATTTATAACCCAGCTGGAAATAGAAGAAGTGCTGGGTTTACAGATGAAGAACGGCAATCCTTCGGGACAAACTTTTTATCCAGAGGATTTGTGGATACATTTAGAAGGCAACACCCTGGTGTTGTTGGCTATACTTACTGGGGCTATCGACATGGTGCACGCAAATTTAACAGAGGGTGGCGGCTTGACTACTTCCTAGTCTCAGAATCTGTGGCTGACAAGGTTCATGACTCGTACATTTTGCCTCATATTATTGGTAGCGATCATTGTCCTATAGGCCTTGTAATTAAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003906 GO:0004518 GO:0004527 GO:0004528 GO:0004529 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006289 GO:0006355 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0008296 GO:0008309 GO:0008311 GO:0008408 GO:0009295 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016796 GO:0016895 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0033683 GO:0034641 GO:0042578 GO:0042644 GO:0042646 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0140097 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

Exo_endo_phos SAP

Protein Analysis

517

Amino Acids

57.98

Weight (kDa)

9.15

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	260 - 508	2.4e-31	Endonuclease/Exonuclease/phosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41460 AT2G41460 AT2G41460 AT2G41460
fragaria_vesca	FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881 FvH4_6g24881
malus_domestica	MD12G1086000.v1.1
prunus_persica	Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1 Prupe.7G050000_v2.0.a1
pyrus_communis	pycom12g07320
rosa_chinensis	RchiOBHm_Chr3g0484531
rosa_laevigata	RLG00000023226
rosa_multiflora	Rmu_sc0012967.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397730
rosa_rugosa	Rorug03G0211400 Rorug03G0211500 Rorug03G0211500
rosa_samantha	Rh3AG262000 Rh3BG297100 Rh3CG294400 Rh3DG290700
rosa_wichuraiana	Rw3G023480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	720, 1263
Acc16I	TGCGCA	2 cut(s)	687, 1242
AccII	CGCG	1 cut(s)	149
AciI	CCGC	3 cut(s)	147, 1063, 1438
AclWI	GGATC	2 cut(s)	1160, 1173
AcsI	RAATTY	3 cut(s)	444, 764, 1421
AfaI	GTAC	1 cut(s)	1493
AfiI	CCNNNNNNNGG	2 cut(s)	1121, 1175
AflIII	ACRYGT	1 cut(s)	956
AjnI	CCWGG	3 cut(s)	71, 354, 1372
AjuI	GAANNNNNNNTTGG	2 cut(s)	570, 602
AleI	CACNNNNGTG	1 cut(s)	1374
Alw21I	GWGCWC	1 cut(s)	1417
Alw26I	GTCTC	8 cut(s)	53, 112, 410, 752, 875, 927, 1132, 1462
Alw44I	GTGCAC	1 cut(s)	1413
AlwI	GGATC	2 cut(s)	1160, 1173
AlwNI	CAGNNNCTG	1 cut(s)	1466
Ama87I	CYCGRG	2 cut(s)	982, 1002
AoxI	GGCC	3 cut(s)	273, 737, 1534
ApaLI	GTGCAC	1 cut(s)	1413
ApeKI	GCWGC	2 cut(s)	158, 629
ApoI	RAATTY	3 cut(s)	444, 764, 1421
AseI	ATTAAT	1 cut(s)	563
Asp700I	GAANNNNTTC	1 cut(s)	947
AspLEI	GCGC	3 cut(s)	151, 688, 1243
AspS9I	GGNCC	2 cut(s)	273, 738
AsuHPI	GGTGA	5 cut(s)	43, 221, 356, 542, 1238
AvaI	CYCGRG	2 cut(s)	982, 1002
BaeGI	GKGCMC	1 cut(s)	1417
BamHI	GGATCC	1 cut(s)	1165
BbsI	GAAGAC	2 cut(s)	300, 444
Bbv12I	GWGCWC	1 cut(s)	1417
BbvI	GCAGC	2 cut(s)	170, 616
BccI	CCATC	4 cut(s)	335, 521, 1121, 1177
BceAI	ACGGC	2 cut(s)	949, 1325
BciT130I	CCWGG	3 cut(s)	73, 356, 1374
BciVI	GTATCC	1 cut(s)	1345
BcoDI	GTCTC	8 cut(s)	53, 112, 410, 752, 875, 927, 1132, 1462
BfaI	CTAG	2 cut(s)	753, 1454
BfmI	CTRYAG	2 cut(s)	875, 1530
BfuI	GTATCC	1 cut(s)	1345
BisI	GCNGC	3 cut(s)	159, 630, 1439
BlsI	GCNGC	3 cut(s)	160, 631, 1440
Bme1390I	CCNGG	3 cut(s)	73, 356, 1374
BmeT110I	CYCGRG	2 cut(s)	982, 1002
BmgT120I	GGNCC	2 cut(s)	273, 738
BmiI	GGNNCC	2 cut(s)	274, 1167
BmrFI	CCNGG	3 cut(s)	73, 356, 1374
BmrI	ACTGGG	1 cut(s)	1405
BmsI	GCATC	1 cut(s)	1252
BmuI	ACTGGG	1 cut(s)	1405
BpiI	GAAGAC	2 cut(s)	300, 444
BplI	GAGNNNNNCTC	2 cut(s)	812, 844
BpmI	CTGGAG	1 cut(s)	1143
BpuEI	CTTGAG	1 cut(s)	583
BsaI	GGTCTC	4 cut(s)	112, 410, 875, 927
BsaJI	CCNNGG	4 cut(s)	71, 354, 671, 1372
BsaXI	ACNNNNNCTCC	2 cut(s)	52, 82
Bsc4I	CCNNNNNNNGG	2 cut(s)	1121, 1175
Bse118I	RCCGGY	1 cut(s)	1210
Bse1I	ACTGG	2 cut(s)	1228, 1400
Bse3DI	GCAATG	2 cut(s)	168, 237
BseBI	CCWGG	3 cut(s)	73, 356, 1374
BseDI	CCNNGG	4 cut(s)	71, 354, 671, 1372
BseGI	GGATG	1 cut(s)	907
BseLI	CCNNNNNNNGG	2 cut(s)	1121, 1175
BseMI	GCAATG	2 cut(s)	168, 237
BseMII	CTCAG	7 cut(s)	58, 251, 262, 405, 713, 756, 1473
BseNI	ACTGG	2 cut(s)	1228, 1400
BseRI	GAGGAG	1 cut(s)	1150
BseSI	GKGCMC	1 cut(s)	1417
BseXI	GCAGC	2 cut(s)	170, 616
BseYI	CCCAGC	2 cut(s)	1267, 1289
Bsh1236I	CGCG	1 cut(s)	149
BshFI	GGCC	3 cut(s)	275, 739, 1536
BsiHKAI	GWGCWC	1 cut(s)	1417
BsiHKCI	CYCGRG	2 cut(s)	982, 1002
BsiSI	CCGG	1 cut(s)	1211
BslFI	GGGAC	1 cut(s)	1336
BslI	CCNNNNNNNGG	2 cut(s)	1121, 1175
BsmAI	GTCTC	8 cut(s)	53, 112, 410, 752, 875, 927, 1132, 1462
BsmFI	GGGAC	1 cut(s)	1336
BsnI	GGCC	3 cut(s)	275, 739, 1536
Bso31I	GGTCTC	4 cut(s)	112, 410, 875, 927
BsoBI	CYCGRG	2 cut(s)	982, 1002
Bsp1286I	GDGCHC	1 cut(s)	1417
Bsp143I	GATC	3 cut(s)	1045, 1165, 1519
Bsp19I	CCATGG	1 cut(s)	671
BspACI	CCGC	3 cut(s)	147, 1063, 1438
BspANI	GGCC	3 cut(s)	275, 739, 1536
BspCNI	CTCAG	7 cut(s)	57, 252, 261, 406, 712, 755, 1472
BspFNI	CGCG	1 cut(s)	149
BspHI	TCATGA	2 cut(s)	1048, 1483
BspLI	GGNNCC	2 cut(s)	274, 1167
BspMAI	CTGCAG	1 cut(s)	879
BspPI	GGATC	2 cut(s)	1160, 1173
BspTNI	GGTCTC	4 cut(s)	112, 410, 875, 927
BsrDI	GCAATG	2 cut(s)	168, 237
BsrFI	RCCGGY	1 cut(s)	1210
BsrI	ACTGG	2 cut(s)	1228, 1400
BssAI	RCCGGY	1 cut(s)	1210
BssECI	CCNNGG	4 cut(s)	71, 354, 671, 1372
BssMI	GATC	3 cut(s)	1045, 1165, 1519
BssT1I	CCWWGG	1 cut(s)	671
Bst2UI	CCWGG	3 cut(s)	73, 356, 1374
Bst6I	CTCTTC	1 cut(s)	911
BstC8I	GCNNGC	2 cut(s)	147, 1417
BstDSI	CCRYGG	1 cut(s)	671
BstEII	GGTNACC	1 cut(s)	209
BstF5I	GGATG	1 cut(s)	907
BstFNI	CGCG	1 cut(s)	149
BstHHI	GCGC	3 cut(s)	151, 688, 1243
BstKTI	GATC	3 cut(s)	1048, 1168, 1522
BstMAI	GTCTC	8 cut(s)	53, 112, 410, 752, 875, 927, 1132, 1462
BstMBI	GATC	3 cut(s)	1045, 1165, 1519
BstMWI	GCNNNNNNNGC	4 cut(s)	113, 155, 167, 745
BstNI	CCWGG	3 cut(s)	73, 356, 1374
BstNSI	RCATGY	2 cut(s)	960, 1042
BstPI	GGTNACC	1 cut(s)	209
BstSCI	CCNGG	3 cut(s)	71, 354, 1372
BstSFI	CTRYAG	2 cut(s)	875, 1530
BstSLI	GKGCMC	1 cut(s)	1417
BstUI	CGCG	1 cut(s)	149
BstV1I	GCAGC	2 cut(s)	170, 616
BstV2I	GAAGAC	2 cut(s)	300, 444
BstX2I	RGATCY	1 cut(s)	1165
BstYI	RGATCY	1 cut(s)	1165
BsuI	GTATCC	1 cut(s)	1345
BsuRI	GGCC	3 cut(s)	275, 739, 1536
BtgI	CCRYGG	1 cut(s)	671
BtsCI	GGATG	1 cut(s)	907
BtsI	GCAGTG	1 cut(s)	17
BtsIMutI	CAGTG	4 cut(s)	17, 177, 257, 459
Cac8I	GCNNGC	2 cut(s)	147, 1417
CaiI	CAGNNNCTG	1 cut(s)	1466
CciI	TCATGA	2 cut(s)	1048, 1483
CfoI	GCGC	3 cut(s)	151, 688, 1243
Cfr10I	RCCGGY	1 cut(s)	1210
Cfr13I	GGNCC	2 cut(s)	273, 738
Csp6I	GTAC	1 cut(s)	1492
CviAII	CATG	8 cut(s)	672, 733, 957, 1039, 1049, 1186, 1409, 1484
CviQI	GTAC	1 cut(s)	1492
DpnI	GATC	3 cut(s)	1047, 1167, 1521
DpnII	GATC	3 cut(s)	1045, 1165, 1519
Eam1104I	CTCTTC	1 cut(s)	911
EarI	CTCTTC	1 cut(s)	911
EciI	GGCGGA	1 cut(s)	1078
Eco130I	CCWWGG	1 cut(s)	671
Eco147I	AGGCCT	1 cut(s)	1536
Eco31I	GGTCTC	4 cut(s)	112, 410, 875, 927
Eco88I	CYCGRG	2 cut(s)	982, 1002
Eco91I	GGTNACC	1 cut(s)	209
EcoO109I	RGGNCCY	2 cut(s)	273, 738
EcoO65I	GGTNACC	1 cut(s)	209
EcoRII	CCWGG	3 cut(s)	71, 354, 1372
EcoT14I	CCWWGG	1 cut(s)	671
ErhI	CCWWGG	1 cut(s)	671
FaeI	CATG	8 cut(s)	675, 736, 960, 1042, 1052, 1189, 1412, 1487
FaqI	GGGAC	1 cut(s)	1336
FatI	CATG	8 cut(s)	671, 732, 956, 1038, 1048, 1185, 1408, 1483
FauI	CCCGC	1 cut(s)	154
Fnu4HI	GCNGC	3 cut(s)	159, 630, 1439
FokI	GGATG	1 cut(s)	914
Fsp4HI	GCNGC	3 cut(s)	159, 630, 1439
FspAI	RTGCGCAY	1 cut(s)	1242
FspBI	CTAG	2 cut(s)	753, 1454
FspI	TGCGCA	2 cut(s)	687, 1242
GlaI	GCGC	3 cut(s)	150, 687, 1242
GluI	GCNGC	3 cut(s)	159, 630, 1439
GsaI	CCCAGC	2 cut(s)	1271, 1293
GsuI	CTGGAG	1 cut(s)	1143
HaeIII	GGCC	3 cut(s)	275, 739, 1536
HapII	CCGG	1 cut(s)	1211
HhaI	GCGC	3 cut(s)	151, 688, 1243
Hin1II	CATG	8 cut(s)	675, 736, 960, 1042, 1052, 1189, 1412, 1487
Hin6I	GCGC	3 cut(s)	149, 686, 1241
HinP1I	GCGC	3 cut(s)	149, 686, 1241
HincII	GTYRAC	2 cut(s)	457, 485
HindII	GTYRAC	2 cut(s)	457, 485
HindIII	AAGCTT	2 cut(s)	773, 1547
HinfI	GANTC	8 cut(s)	4, 76, 569, 712, 825, 1085, 1463, 1487
HpaII	CCGG	1 cut(s)	1211
HphI	GGTGA	5 cut(s)	43, 221, 356, 542, 1238
Hpy166II	GTNNAC	4 cut(s)	457, 485, 1296, 1415
Hpy188I	TCNGA	7 cut(s)	450, 469, 574, 702, 745, 1045, 1462
Hpy8I	GTNNAC	4 cut(s)	457, 485, 1296, 1415
Hpy99I	CGWCG	1 cut(s)	656
HpyAV	CCTTC	3 cut(s)	892, 1327, 1356
HpyCH4IV	ACGT	2 cut(s)	481, 500
HpyCH4V	TGCA	5 cut(s)	22, 838, 877, 892, 1415
HpyF10VI	GCNNNNNNNGC	4 cut(s)	113, 155, 167, 745
HpySE526I	ACGT	2 cut(s)	481, 500
Hsp92II	CATG	8 cut(s)	675, 736, 960, 1042, 1052, 1189, 1412, 1487
HspAI	GCGC	3 cut(s)	149, 686, 1241
Kzo9I	GATC	3 cut(s)	1045, 1165, 1519
LmnI	GCTCC	2 cut(s)	73, 167
Lsp1109I	GCAGC	2 cut(s)	170, 616
LweI	GCATC	1 cut(s)	1252
MaeI	CTAG	2 cut(s)	753, 1454
MaeII	ACGT	2 cut(s)	481, 500
MaeIII	GTNAC	3 cut(s)	209, 977, 1069
MalI	GATC	3 cut(s)	1047, 1167, 1521
MboI	GATC	3 cut(s)	1045, 1165, 1519
MboII	GAAGA	7 cut(s)	300, 449, 866, 920, 928, 1293, 1316
MflI	RGATCY	1 cut(s)	1165
MhlI	GDGCHC	1 cut(s)	1417
MlyI	GAGTC	1 cut(s)	1481
MmeI	TCCRAC	1 cut(s)	568
MroXI	GAANNNNTTC	1 cut(s)	947
MseI	TTAA	5 cut(s)	563, 800, 1220, 1425, 1545
MslI	CAYNNNNRTG	2 cut(s)	316, 1374
MspA1I	CMGCKG	1 cut(s)	1271
MspI	CCGG	1 cut(s)	1211
MspR9I	CCNGG	3 cut(s)	73, 356, 1374
MvaI	CCWGG	3 cut(s)	73, 356, 1374
MvnI	CGCG	1 cut(s)	149
MwoI	GCNNNNNNNGC	4 cut(s)	113, 155, 167, 745
NcoI	CCATGG	1 cut(s)	671
NdeII	GATC	3 cut(s)	1045, 1165, 1519
NlaIII	CATG	8 cut(s)	675, 736, 960, 1042, 1052, 1189, 1412, 1487
NlaIV	GGNNCC	2 cut(s)	274, 1167
NmuCI	GTSAC	1 cut(s)	209
NsbI	TGCGCA	2 cut(s)	687, 1242
NspI	RCATGY	2 cut(s)	960, 1042
OliI	CACNNNNGTG	1 cut(s)	1374
PagI	TCATGA	2 cut(s)	1048, 1483
PceI	AGGCCT	1 cut(s)	1536
PciI	ACATGT	1 cut(s)	956
PcsI	WCGNNNNNNNCGW	2 cut(s)	493, 989
PdmI	GAANNNNTTC	1 cut(s)	947
PfeI	GAWTC	7 cut(s)	4, 76, 569, 712, 825, 1085, 1463
PkrI	GCNGC	3 cut(s)	160, 631, 1440
PleI	GAGTC	1 cut(s)	1481
PpsI	GAGTC	1 cut(s)	1481
PscI	ACATGT	1 cut(s)	956
PshBI	ATTAAT	1 cut(s)	563
PsiI	TTATAA	2 cut(s)	720, 1263
Psp6I	CCWGG	3 cut(s)	71, 354, 1372
PspEI	GGTNACC	1 cut(s)	209
PspFI	CCCAGC	2 cut(s)	1267, 1289
PspGI	CCWGG	3 cut(s)	71, 354, 1372
PspN4I	GGNNCC	2 cut(s)	274, 1167
PspPI	GGNCC	2 cut(s)	273, 738
PstI	CTGCAG	1 cut(s)	879
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	1 cut(s)	1165
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	1 cut(s)	1493
RsaNI	GTAC	1 cut(s)	1492
RseI	CAYNNNNRTG	2 cut(s)	316, 1374
SaqAI	TTAA	5 cut(s)	563, 800, 1220, 1425, 1545
SatI	GCNGC	3 cut(s)	159, 630, 1439
Sau3AI	GATC	3 cut(s)	1045, 1165, 1519
Sau96I	GGNCC	2 cut(s)	273, 738
SchI	GAGTC	1 cut(s)	1481
ScrFI	CCNGG	3 cut(s)	73, 356, 1374
SduI	GDGCHC	1 cut(s)	1417
SfaNI	GCATC	1 cut(s)	1252
SfcI	CTRYAG	2 cut(s)	875, 1530
SmiMI	CAYNNNNRTG	2 cut(s)	316, 1374
SmlI	CTYRAG	1 cut(s)	598
SmoI	CTYRAG	1 cut(s)	598
SseBI	AGGCCT	1 cut(s)	1536
SsiI	CCGC	3 cut(s)	147, 1063, 1438
SspI	AATATT	1 cut(s)	268
SspMI	CTAG	2 cut(s)	753, 1454
StuI	AGGCCT	1 cut(s)	1536
StyD4I	CCNGG	3 cut(s)	71, 354, 1372
StyI	CCWWGG	1 cut(s)	671
TaiI	ACGT	2 cut(s)	484, 503
TaqI	TCGA	4 cut(s)	128, 289, 525, 1405
TaqII	GACCGA	1 cut(s)	434
TauI	GCSGC	1 cut(s)	1441
TfiI	GAWTC	7 cut(s)	4, 76, 569, 712, 825, 1085, 1463
Tru1I	TTAA	5 cut(s)	563, 800, 1220, 1425, 1545
Tru9I	TTAA	5 cut(s)	563, 800, 1220, 1425, 1545
TscAI	CASTG	4 cut(s)	24, 184, 264, 466
TseFI	GTSAC	1 cut(s)	209
TseI	GCWGC	2 cut(s)	158, 629
Tsp45I	GTSAC	1 cut(s)	209
TspDTI	ATGAA	9 cut(s)	17, 300, 450, 591, 785, 1077, 1202, 1317, 1472
TspGWI	ACGGA	1 cut(s)	502
TspRI	CASTG	4 cut(s)	24, 184, 264, 466
VneI	GTGCAC	1 cut(s)	1413
VspI	ATTAAT	1 cut(s)	563
XapI	RAATTY	3 cut(s)	444, 764, 1421
XceI	RCATGY	2 cut(s)	960, 1042
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1345
XmnI	GAANNNNTTC	1 cut(s)	947
XspI	CTAG	2 cut(s)	753, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.