AT2G43160

Clathrin interactor EPSIN

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0003613
Physical Location & Seq
Forward (+)
17947800 .. 17953669
5870 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43160.2

Sequence Viewer

Length: 2688 bp
ATGAAGAAAGTCTTCGGACAAACTGTTAGAGACCTTAAGAGAGAGGTCAACAAGAAAGTGCTCAAAGTTCCTGGAGTAGAACAGAAGGTTCTAGATGCTACTAGTAATGAGCCATGGGGTCCACATGGATCACTTCTTGCTGATCTTGCGCAAGCTTCCAGAAATTATCATGAATATCAGCTGATCATGGTGGTCATATGGAAACGCCTTAGCGACACCGGAAAAAACTGGCGGCATGTCTATAAGGCTTTGACAGTTTTGGAGTACATGGTAGGCCATGGATCAGAACGTGTTATAGACGAGATTAGAGAACGTGCATATCAAATTTCGACATTGTCCGATTTTCAGTATATTGATTCCGGTGGTAGAGATCAAGGAAGCAATGTTAGGAAGAAATCACAGAGCCTGGTGGCTTTGGTGAATGACAAGGAAAGAATAGCTGAAGTCAGACAGAAGGCTGCTGCTAATAGAGATAAGTATCGCAGCTCAGCACCAGGTGGGATGTATAAGCCTTCAGGCGGATATGGGGATAAATATGATTACGGAAGCCGGGATGAAGAGCGAAGTAGTTATGGAAGAGAAAGAGAATATGGTTACAGAGATGATGATAGAAATAGTCGTGATGGAGATCGTCATTCCAGGGACTCTGAAGACCGGTATGGGAGAGATGGTAATAGGGATGATGATTACAGGGGAAGGAGCAGAAGTGTTGATAACTATGGGTCACGAGGTAGGAGTTCGGAAAGAGAGCGGGAGGATGATGGCCATTCTTCATCACGGGGCAGTGGTGCTCGAGCTGATGATAATTCTCAGGATGGGAGAGGGGGGCTCCAGAGGAAGTTTTCTGAACAAAATATTGGCGCTCCACCCAGTTATGAAGAAGCTGTCAGTGATTCACGCAGCCCTGTATATAGTGAAAGGGATGGTGGGGAGACCCCACAAGTTACCGCTCCAGGAGCTGCTTCTCCTCCTCCCCCACAAGTTGCTGCTCCAGAGGCTGCTTCTCCTCCAACTGGAACCAACACAGCCAATACAACTGCTACTTTTGTTAATGAATCACCTTCTCAGAAAGTTGAGACTTTCGATGAATTTGATCCACGCAGTGCGTTTTCAGCTGGCCCTCCAGCATATGCATCTACAGATGGTGTTACAGCTCCTCCAACTGTGACTTCTATGTCTGCCCCTACCACCTCAAACAGTGTTGAGATGGACTTGCTTGGTTCCCTTGCAGACGTATTTTCATCAAACGCATTGGCCATTGTACCAGCTGATTCTATCTATGTTGAAACCAATGGACAAGCAAACGCTGGTCCAGCTCCATCGTTTTCTACATCTCAGCCATCAACTCAGTCATTTGATGACCCATTTGGTGACTCTCCTTTCAAGGCCTTCACTTCTACTGACACCGACTCAACCCCACAGCAGAATTTTGGAGCTTCTTTCCAGCCACCACCTCCAGCCTTCACTTCAGAGGTCTCACATCCTGATACTGCTCATAACTTTGGCTTTGGGGACTCATTTTCCGCCGTTGCCAATCCTGATCCTGCTTCTCAGAATGTGCAACCTCCATCGAACTCACCAGGTTTTCCTCAAGAGCAATTTGCTACATCTCAGAGTGGTATTGATATCCTCGCTGGCATTCTCCCACCATCTGGACCTCCAGTACAATCGGGTCCCTCAATACCAACATCTCAATTTCCTCCCAGTGGAAACAACATGTACGAGGGATTTCATTCTCAGCCGCCGGTATCTACAGCTCCAAACCTGCCTGGACAAACTCCATTTGGACAAGCTGTTCAACCATATAACATGGTTCCTCATTCTCAAAATATGACTGGAGCCATGCCATTTAATAGTGGAGGCTTCATGCACCAGCCGGGCTCACAAACTCCTTACTCTACCCCAAGTGGACCAGCTGGTCAGTTCATGGCACACCAAGGTCATGGAATGCCGCCATCCCATGGTCCACAACGAACTCAATCCGGACCTGTTACTCTGCAAGGGAACAACAATGTCATGGGAGACATGTTCTCGCAAGCTACGCCCAACTCCTTGACGTCATCATCATCTCATCCAGATCTCACACCTTTAACAGGAGCAATTGAGATTGTTCCTCCGCCTCAGAAAAAGTTTGAGCCAAAATCATCAGTCTGGGCAGACACGTTGAGCAGGGGGCTTGTTAACTTTAACATATCTGGATCTAAAACAAATCCATTGGCAGACATAGGAGTTGACTTCGAGGCGATCAACAGGAGAGAGAAACGGCTGGAGAAACAAACAAACACACCAGCAACATCGACTATCAATATGGGTAAAGCCATGGGATCAGGCACTGGCTTAGGGCGTTCTGGTGCAACTGCTATGAGACCTCCACCTAATCCAATGACAGGCTCTGGCATGCCCATGGGCGGAGGAATGGGTGTTGGTAGCTACGGAGGTATGAACCAGAACCAACCCATGGGTATGGGTATGGGGGCCGGAATGAACCAAAACCAACCGATGGGTATGGGAATGGGACCCGGCATGAACATGAACATGAACATGGGAGGATATGGCCAAGGCTATCCGATGCAACCACAAAACCCAGGGATGGTACCTAGCCCAAACATGCCTGGCAATAACTACAATCCGATGATGGGTCAAGGTGGTTACAACCCTCAACAATCCTATGGTGGTGGATACCGGTAA

Protein Analysis

895

Amino Acids

95.48

Weight (kDa)

5.63

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 26 - 146 1.5e-46 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1174, 1917
AatII GACGTC 1 cut(s) 2060
Acc16I TGCGCA 1 cut(s) 150
Acc36I ACCTGC 1 cut(s) 1773
Acc65I GGTACC 1 cut(s) 2593
AccB1I GGYRCC 1 cut(s) 2593
AccB7I CCANNNNNTGG 4 cut(s) 1652, 1961, 2458, 2500
AccBSI CCGCTC 2 cut(s) 751, 950
AccIII TCCGGA 1 cut(s) 1982
AciI CCGC 9 cut(s) 232, 519, 751, 948, 1524, 1742, 1952, 2117, 2409
AclWI GGATC 6 cut(s) 136, 289, 1088, 1535, 2206, 2332
AcoI YGGCCR 3 cut(s) 763, 1254, 2554
AcsI RAATTY 3 cut(s) 324, 1088, 1426
AcuI CTGAAG 4 cut(s) 462, 498, 669, 1452
AcyI GRCGYC 1 cut(s) 2057
AdeI CACNNNGTG 2 cut(s) 497, 1103
AfaI GTAC 5 cut(s) 266, 1263, 1665, 1721, 2595
AflII CTTAAG 1 cut(s) 35
AflIII ACRYGT 4 cut(s) 289, 1716, 2025, 2160
AgeI ACCGGT 2 cut(s) 654, 2682
AgsI TTSAA 3 cut(s) 1286, 1384, 1799
AhlI ACTAGT 1 cut(s) 101
AjnI CCWGG 9 cut(s) 70, 405, 493, 638, 952, 1579, 1768, 2584, 2611
AjuI GAANNNNNNNTTGG 4 cut(s) 840, 872, 1153, 1185
AloI GAACNNNNNNTCC 2 cut(s) 1779, 1811
Alw21I GWGCWC 2 cut(s) 63, 793
Alw26I GTCTC 6 cut(s) 24, 926, 1070, 1480, 2016, 2359
AlwI GGATC 6 cut(s) 136, 289, 1088, 1535, 2206, 2332
AlwNI CAGNNNCTG 5 cut(s) 406, 959, 998, 2333, 2393
Ama87I CYCGRG 1 cut(s) 792
Aor13HI TCCGGA 1 cut(s) 1982
AoxI GGCC 7 cut(s) 274, 763, 1117, 1254, 1386, 2475, 2554
ApeKI GCWGC 7 cut(s) 458, 461, 483, 900, 959, 986, 998
ApoI RAATTY 3 cut(s) 324, 1088, 1426
AsiGI ACCGGT 2 cut(s) 654, 2682
Asp700I GAANNNNTTC 1 cut(s) 11
Asp718I GGTACC 1 cut(s) 2593
AspLEI GCGC 2 cut(s) 151, 863
AsuC2I CCSGG 3 cut(s) 551, 1878, 2520
AsuHPI GGTGA 4 cut(s) 430, 1050, 1382, 1569
AvaI CYCGRG 1 cut(s) 792
AvaII GGWCC 8 cut(s) 119, 1310, 1655, 1673, 1910, 1964, 1985, 2516
BalI TGGCCA 3 cut(s) 765, 1256, 2556
BanI GGYRCC 1 cut(s) 2593
BanII GRGCYC 2 cut(s) 831, 1883
BauI CACGAG 1 cut(s) 726
BbsI GAAGAC 2 cut(s) 4, 657
Bbv12I GWGCWC 2 cut(s) 63, 793
BbvI GCAGC 7 cut(s) 445, 448, 495, 912, 946, 973, 985
BceAI ACGGC 2 cut(s) 1511, 2279
BciT130I CCWGG 9 cut(s) 72, 407, 495, 640, 954, 1581, 1770, 2586, 2613
BciVI GTATCC 1 cut(s) 2672
BclI TGATCA 1 cut(s) 183
BcnI CCSGG 3 cut(s) 551, 1878, 2520
BcoDI GTCTC 6 cut(s) 24, 926, 1070, 1480, 2016, 2359
BcuI ACTAGT 1 cut(s) 101
BfaI CTAG 3 cut(s) 92, 102, 2598
BfmI CTRYAG 2 cut(s) 1137, 1752
BfoI RGCGCY 1 cut(s) 864
BfrI CTTAAG 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 1773
BfuI GTATCC 1 cut(s) 2672
BglII AGATCT 1 cut(s) 2077
BlpI GCTNAGC 1 cut(s) 487
Bme18I GGWCC 8 cut(s) 119, 1310, 1655, 1673, 1910, 1964, 1985, 2516
BmeT110I CYCGRG 1 cut(s) 792
BmrI ACTGGG 2 cut(s) 864, 1698
BmsI GCATC 3 cut(s) 85, 1142, 2559
BmuI ACTGGG 2 cut(s) 864, 1698
BpiI GAAGAC 2 cut(s) 4, 657
BplI GAGNNNNNCTC 2 cut(s) 813, 845
BpmI CTGGAG 9 cut(s) 93, 815, 936, 975, 1107, 1440, 1644, 1857, 2288
Bpu10I CCTNAGC 2 cut(s) 209, 2338
Bpu1102I GCTNAGC 1 cut(s) 487
BpuEI CTTGAG 1 cut(s) 1575
BpuMI CCSGG 3 cut(s) 551, 1878, 2520
BsaBI GATNNNNATC 2 cut(s) 477, 627
BsaHI GRCGYC 1 cut(s) 2057
BsaI GGTCTC 4 cut(s) 24, 926, 1480, 2359
BsaWI WCCGGW 5 cut(s) 218, 359, 654, 1982, 2682
BsaXI ACNNNNNCTCC 6 cut(s) 655, 685, 691, 721, 1141, 1171
Bse118I RCCGGY 3 cut(s) 654, 1744, 2682
Bse1I ACTGG 7 cut(s) 233, 870, 1018, 1661, 1704, 1840, 2338
Bse3DI GCAATG 1 cut(s) 388
Bse8I GATNNNNATC 2 cut(s) 477, 627
BseAI TCCGGA 1 cut(s) 1982
BseBI CCWGG 9 cut(s) 72, 407, 495, 640, 954, 1581, 1770, 2586, 2613
BseJI GATNNNNATC 2 cut(s) 477, 627
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 9 cut(s) 501, 824, 1079, 1349, 1361, 1565, 1625, 1751, 2135
BseNI ACTGG 7 cut(s) 233, 870, 1018, 1661, 1704, 1840, 2338
BseRI GAGGAG 4 cut(s) 957, 960, 996, 1146
BseXI GCAGC 7 cut(s) 445, 448, 495, 912, 946, 973, 985
BshFI GGCC 7 cut(s) 276, 765, 1119, 1256, 1388, 2477, 2556
BshNI GGYRCC 1 cut(s) 2593
BshTI ACCGGT 2 cut(s) 654, 2682
BsiHKAI GWGCWC 2 cut(s) 63, 793
BsiHKCI CYCGRG 1 cut(s) 792
BslFI GGGAC 4 cut(s) 656, 1526, 1659, 2529
BsmAI GTCTC 6 cut(s) 24, 926, 1070, 1480, 2016, 2359
BsmFI GGGAC 4 cut(s) 656, 1526, 1659, 2529
BsmI GAATGC 2 cut(s) 1638, 1953
BsnI GGCC 7 cut(s) 276, 765, 1119, 1256, 1388, 2477, 2556
Bso31I GGTCTC 4 cut(s) 24, 926, 1480, 2359
BsoBI CYCGRG 1 cut(s) 792
Bsp1286I GDGCHC 4 cut(s) 63, 793, 831, 1883
Bsp13I TCCGGA 1 cut(s) 1982
Bsp1720I GCTNAGC 1 cut(s) 487
Bsp19I CCATGG 6 cut(s) 113, 277, 1960, 2319, 2403, 2457
BspACI CCGC 9 cut(s) 232, 519, 751, 948, 1524, 1742, 1952, 2117, 2409
BspANI GGCC 7 cut(s) 276, 765, 1119, 1256, 1388, 2477, 2556
BspCNI CTCAG 9 cut(s) 500, 823, 1078, 1348, 1360, 1564, 1624, 1750, 2134
BspEI TCCGGA 1 cut(s) 1982
BspHI TCATGA 1 cut(s) 169
BspMI ACCTGC 1 cut(s) 1773
BspPI GGATC 6 cut(s) 136, 289, 1088, 1535, 2206, 2332
BspQI GCTCTTC 1 cut(s) 552
BspT107I GGYRCC 1 cut(s) 2593
BspTI CTTAAG 1 cut(s) 35
BspTNI GGTCTC 4 cut(s) 24, 926, 1480, 2359
BsrBI CCGCTC 2 cut(s) 751, 950
BsrDI GCAATG 1 cut(s) 388
BsrFI RCCGGY 3 cut(s) 654, 1744, 2682
BsrI ACTGG 7 cut(s) 233, 870, 1018, 1661, 1704, 1840, 2338
BssAI RCCGGY 3 cut(s) 654, 1744, 2682
BssNI GRCGYC 1 cut(s) 2057
BssSI CACGAG 1 cut(s) 726
BssT1I CCWWGG 8 cut(s) 113, 277, 1936, 1960, 2319, 2403, 2457, 2557
Bst2BI CACGAG 1 cut(s) 726
Bst2UI CCWGG 9 cut(s) 72, 407, 495, 640, 954, 1581, 1770, 2586, 2613
Bst4CI ACNGT 4 cut(s) 25, 256, 1165, 1199
Bst6I CTCTTC 2 cut(s) 552, 571
BstACI GRCGYC 1 cut(s) 2057
BstAFI CTTAAG 1 cut(s) 35
BstC8I GCNNGC 5 cut(s) 153, 1117, 1636, 2037, 2399
BstDSI CCRYGG 6 cut(s) 113, 277, 1960, 2319, 2403, 2457
BstENI CCTNNNNNAGG 1 cut(s) 2091
BstH2I RGCGCY 1 cut(s) 864
BstHHI GCGC 2 cut(s) 151, 863
BstMAI GTCTC 6 cut(s) 24, 926, 1070, 1480, 2016, 2359
BstMWI GCNNNNNNNGC 6 cut(s) 146, 956, 995, 1112, 1313, 2041
BstNI CCWGG 9 cut(s) 72, 407, 495, 640, 954, 1581, 1770, 2586, 2613
BstNSI RCATGY 5 cut(s) 239, 1720, 2029, 2401, 2611
BstSFI CTRYAG 2 cut(s) 1137, 1752
BstV1I GCAGC 7 cut(s) 445, 448, 495, 912, 946, 973, 985
BstV2I GAAGAC 2 cut(s) 4, 657
BstX2I RGATCY 2 cut(s) 2077, 2198
BstXI CCANNNNNNTGG 2 cut(s) 1943, 2464
BstYI RGATCY 2 cut(s) 2077, 2198
BsuI GTATCC 1 cut(s) 2672
BsuRI GGCC 7 cut(s) 276, 765, 1119, 1256, 1388, 2477, 2556
BtgI CCRYGG 6 cut(s) 113, 277, 1960, 2319, 2403, 2457
BtsI GCAGTG 2 cut(s) 790, 1108
BtsIMutI CAGTG 6 cut(s) 790, 895, 1108, 1204, 1711, 2331
BveI ACCTGC 1 cut(s) 1773
Cac8I GCNNGC 5 cut(s) 153, 1117, 1636, 2037, 2399
CaiI CAGNNNCTG 5 cut(s) 406, 959, 998, 2333, 2393
CciI TCATGA 1 cut(s) 169
CfoI GCGC 2 cut(s) 151, 863
Cfr10I RCCGGY 3 cut(s) 654, 1744, 2682
CsiI ACCWGGT 2 cut(s) 493, 1579
Csp6I GTAC 5 cut(s) 265, 1262, 1664, 1720, 2594
CspAI ACCGGT 2 cut(s) 654, 2682
CviQI GTAC 5 cut(s) 265, 1262, 1664, 1720, 2594
DraIII CACNNNGTG 2 cut(s) 497, 1103
DrdI GACNNNNNNGTC 2 cut(s) 1174, 1917
DseDI GACNNNNNNGTC 2 cut(s) 1174, 1917
EaeI YGGCCR 3 cut(s) 763, 1254, 2554
Eam1104I CTCTTC 2 cut(s) 552, 571
EarI CTCTTC 2 cut(s) 552, 571
EciI GGCGGA 4 cut(s) 534, 1513, 2106, 2424
Eco130I CCWWGG 8 cut(s) 113, 277, 1936, 1960, 2319, 2403, 2457, 2557
Eco147I AGGCCT 1 cut(s) 1388
Eco24I GRGCYC 2 cut(s) 831, 1883
Eco31I GGTCTC 4 cut(s) 24, 926, 1480, 2359
Eco32I GATATC 1 cut(s) 1627
Eco47I GGWCC 8 cut(s) 119, 1310, 1655, 1673, 1910, 1964, 1985, 2516
Eco57I CTGAAG 4 cut(s) 462, 498, 669, 1452
Eco88I CYCGRG 1 cut(s) 792
EcoNI CCTNNNNNAGG 1 cut(s) 2091
EcoO109I RGGNCCY 2 cut(s) 1673, 2516
EcoRII CCWGG 9 cut(s) 70, 405, 493, 638, 952, 1579, 1768, 2584, 2611
EcoRV GATATC 1 cut(s) 1627
EcoT14I CCWWGG 8 cut(s) 113, 277, 1936, 1960, 2319, 2403, 2457, 2557
EcoT22I ATGCAT 1 cut(s) 1135
EcoT38I GRGCYC 2 cut(s) 831, 1883
ErhI CCWWGG 8 cut(s) 113, 277, 1936, 1960, 2319, 2403, 2457, 2557
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 4 cut(s) 656, 1526, 1659, 2529
FauI CCCGC 1 cut(s) 744
FauNDI CATATG 2 cut(s) 197, 1129
FbaI TGATCA 1 cut(s) 183
FriOI GRGCYC 2 cut(s) 831, 1883
FspBI CTAG 3 cut(s) 92, 102, 2598
FspI TGCGCA 1 cut(s) 150
GlaI GCGC 2 cut(s) 150, 862
GsuI CTGGAG 9 cut(s) 93, 815, 936, 975, 1107, 1440, 1644, 1857, 2288
HaeII RGCGCY 1 cut(s) 864
HaeIII GGCC 7 cut(s) 276, 765, 1119, 1256, 1388, 2477, 2556
HhaI GCGC 2 cut(s) 151, 863
Hin1I GRCGYC 1 cut(s) 2057
Hin6I GCGC 2 cut(s) 149, 861
HinP1I GCGC 2 cut(s) 149, 861
HincII GTYRAC 3 cut(s) 49, 2182, 2233
HindII GTYRAC 3 cut(s) 49, 2182, 2233
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 8 cut(s) 356, 644, 893, 1055, 1271, 1373, 1409, 1514
HpaI GTTAAC 1 cut(s) 2182
HphI GGTGA 4 cut(s) 430, 1050, 1382, 1569
Hpy166II GTNNAC 6 cut(s) 49, 122, 1910, 1967, 2182, 2233
Hpy8I GTNNAC 6 cut(s) 49, 122, 1910, 1967, 2182, 2233
HpyAV CCTTC 7 cut(s) 79, 448, 522, 690, 1071, 1399, 1471
HpyCH4III ACNGT 4 cut(s) 25, 256, 1165, 1199
HpyCH4IV ACGT 5 cut(s) 289, 313, 1233, 2057, 2162
HpyCH4V TGCA 8 cut(s) 317, 1133, 1229, 1561, 1870, 1999, 2354, 2572
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 956, 995, 1112, 1313, 2041
HpySE526I ACGT 5 cut(s) 289, 313, 1233, 2057, 2162
Hsp92I GRCGYC 1 cut(s) 2057
HspAI GCGC 2 cut(s) 149, 861
KflI GGGWCCC 2 cut(s) 1673, 2516
Kpn2I TCCGGA 1 cut(s) 1982
KpnI GGTACC 1 cut(s) 2597
Ksp22I TGATCA 1 cut(s) 183
KspAI GTTAAC 1 cut(s) 2182
LguI GCTCTTC 1 cut(s) 552
Lsp1109I GCAGC 7 cut(s) 445, 448, 495, 912, 946, 973, 985
LweI GCATC 3 cut(s) 85, 1142, 2559
MabI ACCWGGT 2 cut(s) 493, 1579
MaeI CTAG 3 cut(s) 92, 102, 2598
MaeII ACGT 5 cut(s) 289, 313, 1233, 2057, 2162
MaeIII GTNAC 8 cut(s) 593, 723, 943, 1147, 1165, 1370, 1990, 2648
MbiI CCGCTC 2 cut(s) 751, 950
MboII GAAGA 8 cut(s) 4, 16, 403, 569, 588, 662, 762, 890
MfeI CAATTG 1 cut(s) 2100
MflI RGATCY 2 cut(s) 2077, 2198
MhlI GDGCHC 4 cut(s) 63, 793, 831, 1883
MlsI TGGCCA 3 cut(s) 765, 1256, 2556
MluCI AATT 8 cut(s) 163, 324, 805, 1088, 1426, 1598, 1694, 2100
MluNI TGGCCA 3 cut(s) 765, 1256, 2556
MlyI GAGTC 4 cut(s) 638, 1367, 1403, 1508
MmeI TCCRAC 2 cut(s) 1034, 1184
Mox20I TGGCCA 3 cut(s) 765, 1256, 2556
Mph1103I ATGCAT 1 cut(s) 1135
MroI TCCGGA 1 cut(s) 1982
MroXI GAANNNNTTC 1 cut(s) 11
MscI TGGCCA 3 cut(s) 765, 1256, 2556
MseI TTAA 6 cut(s) 36, 1050, 1851, 2090, 2181, 2187
MslI CAYNNNNRTG 5 cut(s) 2402, 2462, 2528, 2534, 2540
Msp20I TGGCCA 3 cut(s) 765, 1256, 2556
MspA1I CMGCKG 4 cut(s) 181, 1115, 1268, 1916
MspCI CTTAAG 1 cut(s) 35
MunI CAATTG 1 cut(s) 2100
Mva1269I GAATGC 2 cut(s) 1638, 1953
MvaI CCWGG 9 cut(s) 72, 407, 495, 640, 954, 1581, 1770, 2586, 2613
MwoI GCNNNNNNNGC 6 cut(s) 146, 956, 995, 1112, 1313, 2041
NciI CCSGG 3 cut(s) 551, 1878, 2520
NcoI CCATGG 6 cut(s) 113, 277, 1960, 2319, 2403, 2457
NdeI CATATG 2 cut(s) 197, 1129
NmuCI GTSAC 3 cut(s) 723, 1165, 1370
NsbI TGCGCA 1 cut(s) 150
NsiI ATGCAT 1 cut(s) 1135
NspI RCATGY 5 cut(s) 239, 1720, 2029, 2401, 2611
PaeI GCATGC 1 cut(s) 2401
PaeR7I CTCGAG 1 cut(s) 792
PagI TCATGA 1 cut(s) 169
PasI CCCWGGG 1 cut(s) 2585
PceI AGGCCT 1 cut(s) 1388
PciI ACATGT 2 cut(s) 1716, 2025
PciSI GCTCTTC 1 cut(s) 552
PctI GAATGC 2 cut(s) 1638, 1953
PdmI GAANNNNTTC 1 cut(s) 11
PfeI GAWTC 4 cut(s) 356, 893, 1055, 1271
PflFI GACNNNGTC 1 cut(s) 334
PflMI CCANNNNNTGG 4 cut(s) 1652, 1961, 2458, 2500
PfoI TCCNGGA 2 cut(s) 70, 952
PinAI ACCGGT 2 cut(s) 654, 2682
PleI GAGTC 4 cut(s) 638, 1367, 1403, 1508
PpsI GAGTC 4 cut(s) 638, 1367, 1403, 1508
PpuMI RGGWCCY 2 cut(s) 1673, 2516
PscI ACATGT 2 cut(s) 1716, 2025
Psp5II RGGWCCY 2 cut(s) 1673, 2516
Psp6I CCWGG 9 cut(s) 70, 405, 493, 638, 952, 1579, 1768, 2584, 2611
PspGI CCWGG 9 cut(s) 70, 405, 493, 638, 952, 1579, 1768, 2584, 2611
PspPPI RGGWCCY 2 cut(s) 1673, 2516
PspXI VCTCGAGB 1 cut(s) 792
PstNI CAGNNNCTG 5 cut(s) 406, 959, 998, 2333, 2393
PsuI RGATCY 2 cut(s) 2077, 2198
PsyI GACNNNGTC 1 cut(s) 334
PvuII CAGCTG 4 cut(s) 181, 1115, 1268, 1916
RsaI GTAC 5 cut(s) 266, 1263, 1665, 1721, 2595
RsaNI GTAC 5 cut(s) 265, 1262, 1664, 1720, 2594
RseI CAYNNNNRTG 5 cut(s) 2402, 2462, 2528, 2534, 2540
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 6 cut(s) 36, 1050, 1851, 2090, 2181, 2187
SchI GAGTC 4 cut(s) 638, 1367, 1403, 1508
SduI GDGCHC 4 cut(s) 63, 793, 831, 1883
SexAI ACCWGGT 2 cut(s) 493, 1579
SfaNI GCATC 3 cut(s) 85, 1142, 2559
SfcI CTRYAG 2 cut(s) 1137, 1752
Sfr274I CTCGAG 1 cut(s) 792
SinI GGWCC 8 cut(s) 119, 1310, 1655, 1673, 1910, 1964, 1985, 2516
SlaI CTCGAG 1 cut(s) 792
SmiMI CAYNNNNRTG 5 cut(s) 2402, 2462, 2528, 2534, 2540
SmlI CTYRAG 3 cut(s) 35, 792, 1590
SmoI CTYRAG 3 cut(s) 35, 792, 1590
SpeI ACTAGT 1 cut(s) 101
SphI GCATGC 1 cut(s) 2401
Sse9I AATT 8 cut(s) 163, 324, 805, 1088, 1426, 1598, 1694, 2100
SseBI AGGCCT 1 cut(s) 1388
SsiI CCGC 9 cut(s) 232, 519, 751, 948, 1524, 1742, 1952, 2117, 2409
SspI AATATT 1 cut(s) 856
SspMI CTAG 3 cut(s) 92, 102, 2598
StuI AGGCCT 1 cut(s) 1388
StyI CCWWGG 8 cut(s) 113, 277, 1936, 1960, 2319, 2403, 2457, 2557
TaaI ACNGT 4 cut(s) 25, 256, 1165, 1199
TaiI ACGT 5 cut(s) 292, 316, 1236, 2060, 2165
TaqI TCGA 6 cut(s) 329, 793, 1083, 1571, 2238, 2297
TasI AATT 8 cut(s) 163, 324, 805, 1088, 1426, 1598, 1694, 2100
TatI WGTACW 2 cut(s) 264, 1663
TauI GCSGC 3 cut(s) 235, 1744, 1954
TfiI GAWTC 4 cut(s) 356, 893, 1055, 1271
Tru1I TTAA 6 cut(s) 36, 1050, 1851, 2090, 2181, 2187
Tru9I TTAA 6 cut(s) 36, 1050, 1851, 2090, 2181, 2187
TscAI CASTG 6 cut(s) 790, 895, 1108, 1204, 1711, 2338
TseFI GTSAC 3 cut(s) 723, 1165, 1370
TseI GCWGC 7 cut(s) 458, 461, 483, 900, 959, 986, 998
Tsp45I GTSAC 3 cut(s) 723, 1165, 1370
TspGWI ACGGA 2 cut(s) 558, 2448
TspRI CASTG 6 cut(s) 790, 895, 1108, 1204, 1711, 2338
Tth111I GACNNNGTC 1 cut(s) 334
Van91I CCANNNNNTGG 4 cut(s) 1652, 1961, 2458, 2500
Vha464I CTTAAG 1 cut(s) 35
VpaK11BI GGWCC 8 cut(s) 119, 1310, 1655, 1673, 1910, 1964, 1985, 2516
XagI CCTNNNNNAGG 1 cut(s) 2091
XapI RAATTY 3 cut(s) 324, 1088, 1426
XbaI TCTAGA 1 cut(s) 91
XceI RCATGY 5 cut(s) 239, 1720, 2029, 2401, 2611
XhoI CTCGAG 1 cut(s) 792
XmnI GAANNNNTTC 1 cut(s) 11
XspI CTAG 3 cut(s) 92, 102, 2598
ZraI GACGTC 1 cut(s) 2058
Zsp2I ATGCAT 1 cut(s) 1135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.