Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003613

Physical Location & Seq

Genomic Coordinates Forward (+)

21911501 .. 21917860

Gene Structure 6360 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G59290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGAAGAAAGCATTTGGTCAAACTGTCAGAGACCTCAAGAGAGGGGTCAACAAGAAAGTGCTTAAAGTACCTGGAATAGAACAGAAGGTTCTAGATGCTACCAGCAATGAGTCCTGGGGTCCGCATGGATCACTTCTTGCGGACATTGCACATGCTTCGAGAAATTACCATGAATACCAGATTACTATGGGAGTGTTATGGAAACGTCTTAGTGACTCTGGAAAAAATTGGCGGCATGTCTATAAGGCATTGACAGTCTTGGAGTACATGGTAGGCCATGGATCAGAACGTGTCATAGAAGAGGTTAAAGAACATGCATATCAAATTACGACATTATCTGGTTTTCAGTATATTGATTCCAGCGGTAAAGATCAAGGTAGCAATGTCAGGAAGAAGGCGCAGAGCCTTGTGGCTTTGGTTAATGACAAAGAAAGAATAACGGAGGTCAGAGAGAAGGCTGCTGCTAACAGAGATAAGTATCATAACTCAATGCATAGGCCGTCAGGAGGATATGGGGACAAATATGATTACGAAGGCCGCTATGGAGACAGAGATGAAGGGCGAAGTAGTTATGGGAAAGAGAGAGAATATGGTTACAGGGATGATGATAGAAATAGTCGTGATGGCGATCGTTATTCTAGAGACTCTGAAGACCGATATGGAAGAGATGGTAACACGGATGACGAATACCGTGGAAGGAGCAGAAGTGTTGATAATTACAATGGATCAAGAGGTAGGAGCTCGGACAGGGAACGGCCTATTGAGGATGATGGCCAATCCTCATCGCGGGATAGTGGTGCGCCAGCTGATGATCATTCTCAAGATGGGAGAGGGGGGCTAGAGAGAAAGTTCTCTGAACAAAATATTGGTGCTGCTCCACCTAGTTATGAAGAAGCTGTGAGTGAATCACGGAGCCCTGTATACAGTGAAAGGGATGGTGGAGAGACCCCACAAGTTGCTCCTCCAGGAGCTGCTGCTTCTCCTCTTGCTGAAAACATCAGCGTGGACAACAAAGCTGCTGATTTTGTTAATGAATCATCTCCTCAGCAAGTTGAGGCTTTTGATGAATTTGATCCACGAGGTTCAGTTTCAGCAGCATGTGCACCTACAGCTGGTGCTTCGGTTCCTGCACCTATCCCACCAACAGTGGTTTCTACGCCTGCCCCGCCTGCCTCAATTAATGCAGAAATGGATTTGCTTGGCTCTCTTTCAGATGTATTTTCACCAAATCCCTTGGCTATTGTAACATCTGATTCCACTTCTGTTGAAACCAATGGACAAGCAAACACTGGTTTAGCTCCATCGTTTTCTACTTCTCAGTCATCTACTCAGCCTTTTGATGATCCATTTGGTGACTCTCCTTTCAAAGCCATCACTTCTGCTGACACTGAGACAAGCCAACATCAGAGTTTTGGAGTTCCTTTTCAGCCAACACCACCAACTTCAAATCCTAACAATGAACATAACTTTGGTTTTGGGGAAGCATTTTCAGCTGTTACCGATTCTGAACCTGGCGTTCAAAATATGCAAGCTCCACCGAACTTATCCGTCTTTCCTCAAGAGCAGTTTGATACATCGCAGAGCGAAATCGATATTCTTGCCGGCATTCTCCCACCATCTGGACCGCCAGTTTCTCTGTCTCCACAACCAGATTCCACTATGCCAACATCCCAATTTCATCCCAATGGTAACTCCTATGAAAGCTATCATCATCAAGCCGCGCCTACAGATCTAAACATGCAAGGACAAACACCGTTTGGTCAAGCTTCACAACAATTTAACATGGTTTCACATTCACAAAATCATCATGAAGGTATGCAATTCAACAATGGGGGCTTCACGCAACAGCCAGGCTATGCAGGTCCAGCAACCTCTCAACCTCCACAATATACTCCTGGTGTATCTTCACACCCACCAAGTGAGAGTTTTCCTCACCAACCAGGTTCTGCCACCTCAGCAAGCTCGCAAACTCCTTACGCTACTACACCCAATGTATCAGCTGGGCAGTTTGATGGTGGGAGTTTCATGACACAGCAACCTTATGGTGTGACACAACAAGTTCATGTTGTCCCTTCCCATATACCACAGCGAACTCAATCTGGACCTGTTGCAGCGTTTGGGAATAATAACAATATCGTTGGAGATATGCACCAACCTGGTTCTACCCCCTCATCAAGCTCGCAAACTCCTTACCCTACTACGCCCAATGCACCAAGTGGTCAGTTTGATGGTGGAAATTTTATGACACAACAACCTTATGGTGTGATACCGCAAGTTCATGGCGTCCCTTCCCATATACCACAGCGAACTCAATCTGGACCTGTTGCAGCGCACGGGAATAGTAACAATGTTGTTGGGGATATGTTTTCACCAGCTGGACTAAGTTCCTTGGAGACATCAGCATCGCAACCATCTCTCACACCTTTAACAGGAGCAATTGAAATTGTTCCCCAAAATCAGAAGAAGTTTGAGCCAAAATCAACAATTTGGGCTGATACATTAAGTAGAGGGCTAGTTAACTTCAACATTTCTGGACCGAAAACAAATCCATTGGCGGATATAGGAGTTGACTTCGAGGCAATCAACAGGAAAGAGAAACGGCTAGAGAAACCAACTATCACACAACAACAAGTAACATCAACTATCAACATGGGGAAAGCCATGGGATCTGGTACTGGCTTAGGTCGCGCTGGTGCAGGTGCTATGAGACCTCCAACAAATTCAATGGTAGGCTCAAGCATGCCCACGGGCATGAATGTTGGTGGCTATGGAGGCATGAACCAACACCAACCCATAGGCATGAACCAAAACCATCCCATGGGCATGAACCAAAACCTTTCCATGGGAATGAACCAGAACTATCCCATGGGAATGAACCAAAACTATCCAATGGGAATGGGCATGAACATGAACATGGGCGGGTATGGACAAGGGTATCCGATGCAACCACAACAAGGAATGGGCATGGCTCCTCCTGGTGCACCACAAGGCATGACCGGTGCCTATAATCCAATGATGGGTCAAGGCGGTTACAACCCTCAGCAGCAGCAACCATATGGTGGAGGTTACCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0008289 GO:0012505 GO:0016020 GO:0030276 GO:0031090 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ENTH

Protein Analysis

1024

Amino Acids

109.69

Weight (kDa)

5.42

Isoelectric Point (pI)

48.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ENTH	PF01417	26 - 146	4.3e-45	ENTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43160 AT2G43160 AT2G43160 AT2G43160 AT2G43160 AT3G59290
fragaria_vesca	FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622 FvH4_4g11622
malus_domestica	MD00G1184300.v1.1 MD04G1031100.v1.1
prunus_persica	Prupe.1G182600_v2.0.a1 Prupe.1G182600_v2.0.a1
pyrus_communis	pycom13g29520
rosa_chinensis	RchiOBHm_Chr4g0408771
rosa_laevigata	RLG00000008632
rosa_multiflora	Rmu_co8298845.1_g000001 Rmu_sc0005878.1_g000006 Rmu_sc0007333.1_g000008
rosa_roxburghii	Rroxscaffold_5G00353120
rosa_rugosa	Rorug04G0087500 Rorug04G0087600 Rorug04G0087700
rosa_samantha	Rh4AG151800 Rh4BG149100 Rh4CG159900 Rh4DG145000
rosa_wichuraiana	Rw4G012450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2687
Acc36I	ACCTGC	2 cut(s)	1850, 2687
AccB1I	GGYRCC	1 cut(s)	2999
AccB7I	CCANNNNNTGG	3 cut(s)	1619, 2818, 3059
AccI	GTMKAC	1 cut(s)	921
AccII	CGCG	3 cut(s)	787, 1721, 2688
AclWI	GGATC	6 cut(s)	136, 289, 733, 1067, 1337, 2674
AcoI	YGGCCR	1 cut(s)	772
AcsI	RAATTY	3 cut(s)	1067, 2236, 2719
AcuI	CTGAAG	1 cut(s)	669
AcyI	GRCGYC	1 cut(s)	2283
AdeI	CACNNNGTG	2 cut(s)	1919, 2216
AfaI	GTAC	3 cut(s)	69, 266, 2674
AflIII	ACRYGT	1 cut(s)	289
AgeI	ACCGGT	2 cut(s)	2996, 3069
AgsI	TTSAA	8 cut(s)	1268, 1366, 1446, 1520, 1825, 2441, 2524, 2724
AjnI	CCWGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
AjuI	GAANNNNNNNTTGG	6 cut(s)	849, 881, 1135, 1167, 1452, 1484
Alw21I	GWGCWC	3 cut(s)	743, 1105, 2983
Alw26I	GTCTC	8 cut(s)	24, 540, 636, 938, 1385, 1644, 2387, 2701
Alw44I	GTGCAC	2 cut(s)	1101, 2979
AlwI	GGATC	6 cut(s)	136, 289, 733, 1067, 1337, 2674
AlwNI	CAGNNNCTG	2 cut(s)	971, 1946
AoxI	GGCC	5 cut(s)	274, 497, 535, 755, 772
ApaLI	GTGCAC	2 cut(s)	1101, 2979
ApoI	RAATTY	3 cut(s)	1067, 2236, 2719
AseI	ATTAAT	1 cut(s)	1179
AsiGI	ACCGGT	2 cut(s)	2996, 3069
Asp700I	GAANNNNTTC	1 cut(s)	2445
AspLEI	GCGC	5 cut(s)	400, 802, 1723, 2332, 2690
AspS9I	GGNCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
AsuHPI	GGTGA	4 cut(s)	1215, 1364, 1925, 2361
AvaII	GGWCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
BaeGI	GKGCMC	2 cut(s)	1105, 2983
BaeI	ACNNNNGTAYC	2 cut(s)	2918, 2951
BalI	TGGCCA	1 cut(s)	774
BanI	GGYRCC	1 cut(s)	2999
BanII	GRGCYC	2 cut(s)	743, 917
BauI	CACGAG	1 cut(s)	1077
BbsI	GAAGAC	1 cut(s)	657
Bbv12I	GWGCWC	3 cut(s)	743, 1105, 2983
BbvCI	CCTCAGC	3 cut(s)	1044, 1954, 3039
BceAI	ACGGC	3 cut(s)	484, 770, 2615
BcgI	CGANNNNNNTGC	4 cut(s)	138, 172, 1580, 1614
BciT130I	CCWGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
BciVI	GTATCC	1 cut(s)	2946
BclI	TGATCA	1 cut(s)	811
BcoDI	GTCTC	8 cut(s)	24, 540, 636, 938, 1385, 1644, 2387, 2701
BfaI	CTAG	6 cut(s)	92, 639, 839, 882, 2513, 2603
BfmI	CTRYAG	2 cut(s)	1107, 1725
BfuAI	ACCTGC	2 cut(s)	1850, 2687
BfuI	GTATCC	1 cut(s)	2946
BglII	AGATCT	1 cut(s)	1729
Bme1390I	CCNGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
Bme18I	GGWCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
BmgT120I	GGNCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
BmiI	GGNNCC	5 cut(s)	120, 914, 1125, 2970, 3001
BmrFI	CCNGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
BmsI	GCATC	3 cut(s)	85, 2411, 2931
BpiI	GAAGAC	1 cut(s)	657
BplI	GAGNNNNNCTC	2 cut(s)	1915, 1947
BpmI	CTGGAG	1 cut(s)	948
Bpu10I	CCTNAGC	4 cut(s)	1044, 1954, 2680, 3039
BpuEI	CTTGAG	4 cut(s)	20, 804, 1542, 2719
Bsa29I	ATCGAT	1 cut(s)	1590
BsaBI	GATNNNNATC	2 cut(s)	477, 627
BsaHI	GRCGYC	1 cut(s)	2283
BsaI	GGTCTC	3 cut(s)	24, 938, 2701
BsaWI	WCCGGW	2 cut(s)	2996, 3069
BsaXI	ACNNNNNCTCC	2 cut(s)	691, 721
Bse118I	RCCGGY	3 cut(s)	1601, 2996, 3069
Bse1I	ACTGG	3 cut(s)	1294, 1628, 2680
Bse3DI	GCAATG	3 cut(s)	112, 144, 388
Bse8I	GATNNNNATC	2 cut(s)	477, 627
BseBI	CCWGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
BseCI	ATCGAT	1 cut(s)	1590
BseGI	GGATG	7 cut(s)	607, 685, 772, 940, 1667, 1678, 2812
BseJI	GATNNNNATC	2 cut(s)	477, 627
BseMI	GCAATG	3 cut(s)	112, 144, 388
BseMII	CTCAG	6 cut(s)	1058, 1331, 1343, 1380, 1968, 3053
BseNI	ACTGG	3 cut(s)	1294, 1628, 2680
BseRI	GAGGAG	4 cut(s)	951, 972, 1032, 2961
BseSI	GKGCMC	2 cut(s)	1105, 2983
BseYI	CCCAGC	1 cut(s)	2000
BsgI	GTGCAG	2 cut(s)	1113, 2715
Bsh1236I	CGCG	3 cut(s)	787, 1721, 2688
Bsh1285I	CGRYCG	1 cut(s)	631
BshFI	GGCC	5 cut(s)	276, 499, 537, 757, 774
BshNI	GGYRCC	1 cut(s)	2999
BshTI	ACCGGT	2 cut(s)	2996, 3069
BshVI	ATCGAT	1 cut(s)	1590
BsiEI	CGRYCG	1 cut(s)	631
BsiHKAI	GWGCWC	3 cut(s)	743, 1105, 2983
BsiSI	CCGG	3 cut(s)	1602, 2997, 3070
BslFI	GGGAC	3 cut(s)	530, 2054, 2270
BsmAI	GTCTC	8 cut(s)	24, 540, 636, 938, 1385, 1644, 2387, 2701
BsmFI	GGGAC	3 cut(s)	530, 2054, 2270
BsmI	GAATGC	1 cut(s)	1605
BsnI	GGCC	5 cut(s)	276, 499, 537, 757, 774
Bso31I	GGTCTC	3 cut(s)	24, 938, 2701
Bsp1286I	GDGCHC	4 cut(s)	743, 917, 1105, 2983
Bsp19I	CCATGG	5 cut(s)	277, 2661, 2817, 2841, 2865
BspANI	GGCC	5 cut(s)	276, 499, 537, 757, 774
BspCNI	CTCAG	6 cut(s)	1057, 1330, 1342, 1381, 1967, 3052
BspDI	ATCGAT	1 cut(s)	1590
BspFNI	CGCG	3 cut(s)	787, 1721, 2688
BspHI	TCATGA	2 cut(s)	1807, 2025
BspLI	GGNNCC	5 cut(s)	120, 914, 1125, 2970, 3001
BspMI	ACCTGC	2 cut(s)	1850, 2687
BspPI	GGATC	6 cut(s)	136, 289, 733, 1067, 1337, 2674
BspT107I	GGYRCC	1 cut(s)	2999
BspTNI	GGTCTC	3 cut(s)	24, 938, 2701
BsrDI	GCAATG	3 cut(s)	112, 144, 388
BsrFI	RCCGGY	3 cut(s)	1601, 2996, 3069
BsrI	ACTGG	3 cut(s)	1294, 1628, 2680
BssAI	RCCGGY	3 cut(s)	1601, 2996, 3069
BssNAI	GTATAC	1 cut(s)	922
BssNI	GRCGYC	1 cut(s)	2283
BssSI	CACGAG	1 cut(s)	1077
BssT1I	CCWWGG	7 cut(s)	277, 1233, 2388, 2661, 2817, 2841, 2865
Bst1107I	GTATAC	1 cut(s)	922
Bst2BI	CACGAG	1 cut(s)	1077
Bst2UI	CCWGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
Bst4CI	ACNGT	6 cut(s)	25, 256, 692, 926, 1147, 1755
Bst6I	CTCTTC	2 cut(s)	294, 658
BstACI	GRCGYC	1 cut(s)	2283
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstC8I	GCNNGC	9 cut(s)	804, 1161, 1170, 1530, 1603, 1960, 1964, 2180, 2741
BstDEI	CTNAG	9 cut(s)	209, 1044, 1317, 1329, 1389, 1954, 2381, 2680, 3039
BstDSI	CCRYGG	7 cut(s)	277, 691, 2661, 2745, 2817, 2841, 2865
BstEII	GGTNACC	1 cut(s)	3065
BstENI	CCTNNNNNAGG	1 cut(s)	2427
BstF5I	GGATG	7 cut(s)	607, 685, 772, 940, 1667, 1678, 2812
BstFNI	CGCG	3 cut(s)	787, 1721, 2688
BstHHI	GCGC	5 cut(s)	400, 802, 1723, 2332, 2690
BstMAI	GTCTC	8 cut(s)	24, 540, 636, 938, 1385, 1644, 2387, 2701
BstMCI	CGRYCG	1 cut(s)	631
BstNI	CCWGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
BstNSI	RCATGY	6 cut(s)	155, 239, 317, 1101, 1741, 2743
BstPI	GGTNACC	1 cut(s)	3065
BstSCI	CCNGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
BstSFI	CTRYAG	2 cut(s)	1107, 1725
BstSLI	GKGCMC	2 cut(s)	1105, 2983
BstUI	CGCG	3 cut(s)	787, 1721, 2688
BstV2I	GAAGAC	1 cut(s)	657
BstX2I	RGATCY	2 cut(s)	1729, 2666
BstYI	RGATCY	2 cut(s)	1729, 2666
BstZ17I	GTATAC	1 cut(s)	922
Bsu15I	ATCGAT	1 cut(s)	1590
BsuI	GTATCC	1 cut(s)	2946
BsuRI	GGCC	5 cut(s)	276, 499, 537, 757, 774
BsuTUI	ATCGAT	1 cut(s)	1590
BtgI	CCRYGG	7 cut(s)	277, 691, 2661, 2745, 2817, 2841, 2865
BtgZI	GCGATG	3 cut(s)	768, 1560, 2388
BtsCI	GGATG	7 cut(s)	607, 685, 772, 940, 1667, 1678, 2812
BtsIMutI	CAGTG	4 cut(s)	931, 1152, 1287, 1386
BveI	ACCTGC	2 cut(s)	1850, 2687
Cac8I	GCNNGC	9 cut(s)	804, 1161, 1170, 1530, 1603, 1960, 1964, 2180, 2741
CaiI	CAGNNNCTG	2 cut(s)	971, 1946
CciI	TCATGA	2 cut(s)	1807, 2025
CfoI	GCGC	5 cut(s)	400, 802, 1723, 2332, 2690
Cfr10I	RCCGGY	3 cut(s)	1601, 2996, 3069
Cfr13I	GGNCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
ClaI	ATCGAT	1 cut(s)	1590
CseI	GACGC	1 cut(s)	2272
CsiI	ACCWGGT	2 cut(s)	1939, 2155
Csp6I	GTAC	3 cut(s)	68, 265, 2673
CspAI	ACCGGT	2 cut(s)	2996, 3069
CspCI	CAANNNNNGTGG	2 cut(s)	1246, 1281
CviQI	GTAC	3 cut(s)	68, 265, 2673
DdeI	CTNAG	9 cut(s)	209, 1044, 1317, 1329, 1389, 1954, 2381, 2680, 3039
DraIII	CACNNNGTG	2 cut(s)	1919, 2216
EaeI	YGGCCR	1 cut(s)	772
Eam1104I	CTCTTC	2 cut(s)	294, 658
EarI	CTCTTC	2 cut(s)	294, 658
EciI	GGCGGA	1 cut(s)	2570
Ecl136II	GAGCTC	1 cut(s)	741
Eco130I	CCWWGG	7 cut(s)	277, 1233, 2388, 2661, 2817, 2841, 2865
Eco24I	GRGCYC	2 cut(s)	743, 917
Eco31I	GGTCTC	3 cut(s)	24, 938, 2701
Eco47I	GGWCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
Eco53kI	GAGCTC	1 cut(s)	741
Eco57I	CTGAAG	1 cut(s)	669
Eco91I	GGTNACC	1 cut(s)	3065
EcoICRI	GAGCTC	1 cut(s)	741
EcoNI	CCTNNNNNAGG	1 cut(s)	2427
EcoO65I	GGTNACC	1 cut(s)	3065
EcoRII	CCWGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
EcoT14I	CCWWGG	7 cut(s)	277, 1233, 2388, 2661, 2817, 2841, 2865
EcoT22I	ATGCAT	2 cut(s)	319, 495
EcoT38I	GRGCYC	2 cut(s)	743, 917
ErhI	CCWWGG	7 cut(s)	277, 1233, 2388, 2661, 2817, 2841, 2865
FaqI	GGGAC	3 cut(s)	530, 2054, 2270
FauI	CCCGC	3 cut(s)	780, 1173, 2912
FauNDI	CATATG	1 cut(s)	3055
FbaI	TGATCA	1 cut(s)	811
FblI	GTMKAC	1 cut(s)	921
FokI	GGATG	7 cut(s)	614, 692, 779, 947, 1654, 1665, 2799
FriOI	GRGCYC	2 cut(s)	743, 917
FspBI	CTAG	6 cut(s)	92, 639, 839, 882, 2513, 2603
GlaI	GCGC	5 cut(s)	399, 801, 1722, 2331, 2689
GsaI	CCCAGC	1 cut(s)	2004
GsuI	CTGGAG	1 cut(s)	948
HaeIII	GGCC	5 cut(s)	276, 499, 537, 757, 774
HapII	CCGG	3 cut(s)	1602, 2997, 3070
HgaI	GACGC	1 cut(s)	2272
HhaI	GCGC	5 cut(s)	400, 802, 1723, 2332, 2690
Hin1I	GRCGYC	1 cut(s)	2283
Hin6I	GCGC	5 cut(s)	398, 800, 1721, 2330, 2688
HinP1I	GCGC	5 cut(s)	398, 800, 1721, 2330, 2688
HincII	GTYRAC	3 cut(s)	49, 2518, 2569
HindII	GTYRAC	3 cut(s)	49, 2518, 2569
HindIII	AAGCTT	1 cut(s)	1764
HpaI	GTTAAC	1 cut(s)	2518
HpaII	CCGG	3 cut(s)	1602, 2997, 3070
HphI	GGTGA	4 cut(s)	1215, 1364, 1925, 2361
Hpy166II	GTNNAC	7 cut(s)	49, 922, 1006, 1103, 2518, 2569, 2981
Hpy8I	GTNNAC	7 cut(s)	49, 922, 1006, 1103, 2518, 2569, 2981
HpyAV	CCTTC	9 cut(s)	79, 388, 448, 527, 551, 690, 1805, 2082, 2298
HpyCH4III	ACNGT	6 cut(s)	25, 256, 692, 926, 1147, 1755
HpyCH4IV	ACGT	2 cut(s)	205, 289
HpyF3I	CTNAG	9 cut(s)	209, 1044, 1317, 1329, 1389, 1954, 2381, 2680, 3039
HpySE526I	ACGT	2 cut(s)	205, 289
Hsp92I	GRCGYC	1 cut(s)	2283
HspAI	GCGC	5 cut(s)	398, 800, 1721, 2330, 2688
KroI	GCCGGC	1 cut(s)	1601
KroNI	GCCGGC	1 cut(s)	1603
Ksp22I	TGATCA	1 cut(s)	811
KspAI	GTTAAC	1 cut(s)	2518
LweI	GCATC	3 cut(s)	85, 2411, 2931
MabI	ACCWGGT	2 cut(s)	1939, 2155
MaeI	CTAG	6 cut(s)	92, 639, 839, 882, 2513, 2603
MaeII	ACGT	2 cut(s)	205, 289
MboII	GAAGA	8 cut(s)	16, 311, 403, 662, 675, 902, 1896, 2473
MfeI	CAATTG	1 cut(s)	2436
MflI	RGATCY	2 cut(s)	1729, 2666
MhlI	GDGCHC	4 cut(s)	743, 917, 1105, 2983
MlsI	TGGCCA	1 cut(s)	774
MluNI	TGGCCA	1 cut(s)	774
MlyI	GAGTC	4 cut(s)	119, 209, 638, 1349
MmeI	TCCRAC	2 cut(s)	2119, 2738
Mox20I	TGGCCA	1 cut(s)	774
Mph1103I	ATGCAT	2 cut(s)	319, 495
MroNI	GCCGGC	1 cut(s)	1601
MroXI	GAANNNNTTC	1 cut(s)	2445
MscI	TGGCCA	1 cut(s)	774
MseI	TTAA	9 cut(s)	63, 306, 420, 1029, 1179, 1779, 2426, 2501, 2517
MslI	CAYNNNNRTG	9 cut(s)	1001, 1683, 2750, 2798, 2822, 2846, 2870, 2906, 2912
Msp20I	TGGCCA	1 cut(s)	774
MspA1I	CMGCKG	6 cut(s)	363, 806, 1112, 1493, 2000, 2375
MspI	CCGG	3 cut(s)	1602, 2997, 3070
MspR9I	CCNGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
MunI	CAATTG	1 cut(s)	2436
Mva1269I	GAATGC	1 cut(s)	1605
MvaI	CCWGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
MvnI	CGCG	3 cut(s)	787, 1721, 2688
NaeI	GCCGGC	1 cut(s)	1603
NcoI	CCATGG	5 cut(s)	277, 2661, 2817, 2841, 2865
NdeI	CATATG	1 cut(s)	3055
NgoMIV	GCCGGC	1 cut(s)	1601
NlaIV	GGNNCC	5 cut(s)	120, 914, 1125, 2970, 3001
NmuCI	GTSAC	3 cut(s)	212, 1352, 2047
NsiI	ATGCAT	2 cut(s)	319, 495
NspI	RCATGY	6 cut(s)	155, 239, 317, 1101, 1741, 2743
PaeI	GCATGC	1 cut(s)	2743
PagI	TCATGA	2 cut(s)	1807, 2025
PaqCI	CACCTGC	1 cut(s)	2687
PctI	GAATGC	1 cut(s)	1605
PdiI	GCCGGC	1 cut(s)	1603
PdmI	GAANNNNTTC	1 cut(s)	2445
PfeI	GAWTC	6 cut(s)	356, 905, 1034, 1253, 1502, 1652
PflMI	CCANNNNNTGG	3 cut(s)	1619, 2818, 3059
PfoI	TCCNGGA	1 cut(s)	964
PinAI	ACCGGT	2 cut(s)	2996, 3069
Ple19I	CGATCG	1 cut(s)	631
PleI	GAGTC	4 cut(s)	118, 209, 638, 1349
PpsI	GAGTC	4 cut(s)	118, 209, 638, 1349
PshBI	ATTAAT	1 cut(s)	1179
Psp124BI	GAGCTC	1 cut(s)	743
Psp6I	CCWGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
PspEI	GGTNACC	1 cut(s)	3065
PspFI	CCCAGC	1 cut(s)	2000
PspGI	CCWGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
PspN4I	GGNNCC	5 cut(s)	120, 914, 1125, 2970, 3001
PspPI	GGNCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
PstNI	CAGNNNCTG	2 cut(s)	971, 1946
PsuI	RGATCY	2 cut(s)	1729, 2666
PvuI	CGATCG	1 cut(s)	631
PvuII	CAGCTG	5 cut(s)	806, 1112, 1493, 2000, 2375
RsaI	GTAC	3 cut(s)	69, 266, 2674
RsaNI	GTAC	3 cut(s)	68, 265, 2673
RseI	CAYNNNNRTG	9 cut(s)	1001, 1683, 2750, 2798, 2822, 2846, 2870, 2906, 2912
SacI	GAGCTC	1 cut(s)	743
SaqAI	TTAA	9 cut(s)	63, 306, 420, 1029, 1179, 1779, 2426, 2501, 2517
Sau96I	GGNCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
SchI	GAGTC	4 cut(s)	119, 209, 638, 1349
ScrFI	CCNGG	9 cut(s)	72, 115, 966, 1512, 1851, 1896, 1941, 2157, 2976
SduI	GDGCHC	4 cut(s)	743, 917, 1105, 2983
SexAI	ACCWGGT	2 cut(s)	1939, 2155
SfaNI	GCATC	3 cut(s)	85, 2411, 2931
SfcI	CTRYAG	2 cut(s)	1107, 1725
SinI	GGWCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
SmiMI	CAYNNNNRTG	9 cut(s)	1001, 1683, 2750, 2798, 2822, 2846, 2870, 2906, 2912
SmlI	CTYRAG	4 cut(s)	35, 819, 1557, 2734
SmoI	CTYRAG	4 cut(s)	35, 819, 1557, 2734
SphI	GCATGC	1 cut(s)	2743
SspI	AATATT	1 cut(s)	865
SspMI	CTAG	6 cut(s)	92, 639, 839, 882, 2513, 2603
SstI	GAGCTC	1 cut(s)	743
StyD4I	CCNGG	9 cut(s)	70, 113, 964, 1510, 1849, 1894, 1939, 2155, 2974
StyI	CCWWGG	7 cut(s)	277, 1233, 2388, 2661, 2817, 2841, 2865
TaaI	ACNGT	6 cut(s)	25, 256, 692, 926, 1147, 1755
TaiI	ACGT	2 cut(s)	208, 292
TaqI	TCGA	3 cut(s)	158, 1590, 2574
TaqII	GACCGA	2 cut(s)	669, 2551
TatI	WGTACW	1 cut(s)	264
TauI	GCSGC	3 cut(s)	235, 540, 1721
TfiI	GAWTC	6 cut(s)	356, 905, 1034, 1253, 1502, 1652
Tru1I	TTAA	9 cut(s)	63, 306, 420, 1029, 1179, 1779, 2426, 2501, 2517
Tru9I	TTAA	9 cut(s)	63, 306, 420, 1029, 1179, 1779, 2426, 2501, 2517
TscAI	CASTG	4 cut(s)	931, 1152, 1294, 1393
TseFI	GTSAC	3 cut(s)	212, 1352, 2047
Tsp45I	GTSAC	3 cut(s)	212, 1352, 2047
TspGWI	ACGGA	4 cut(s)	455, 692, 925, 1537
TspRI	CASTG	4 cut(s)	931, 1152, 1294, 1393
Van91I	CCANNNNNTGG	3 cut(s)	1619, 2818, 3059
VneI	GTGCAC	2 cut(s)	1101, 2979
VpaK11BI	GGWCC	6 cut(s)	119, 1622, 1862, 2102, 2318, 2534
VspI	ATTAAT	1 cut(s)	1179
XagI	CCTNNNNNAGG	1 cut(s)	2427
XapI	RAATTY	3 cut(s)	1067, 2236, 2719
XbaI	TCTAGA	2 cut(s)	91, 638
XceI	RCATGY	6 cut(s)	155, 239, 317, 1101, 1741, 2743
XmiI	GTMKAC	1 cut(s)	921
XmnI	GAANNNNTTC	1 cut(s)	2445
XspI	CTAG	6 cut(s)	92, 639, 839, 882, 2513, 2603
Zsp2I	ATGCAT	2 cut(s)	319, 495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.