Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007686

Physical Location & Seq

Genomic Coordinates Reverse (-)

19022154 .. 19027528

Gene Structure 5375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G46340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGCCTGTTATGGAAAGAGTAGCTGAAGAAACTGTGGCGACTAACAACATACAATTGAAAGCACGAGTGGATGATGTTCCTTGTAATAAGCTTGATGCTCGTCATAACGATATGGTGATTCAATCAGAAACTGCAAACAGTGATTGTCCTGGAAGCTCAGCTCACAGGAATGTTGATTTGACTAAGCCGCCGCCTCCTGAGGAAGCCGCAGGAGCTAAGCTTTCTGTTGAAGAGTTGACATTGGGGAACTACAGGATTGTTCAAGGGAGTAATAATACTAATGTGGATAGTCCTAGGGCTGGCAAGTTTGAGCATCTTTATCGTTTGGCTAGAGGGTCTGCTTTTAGGGCAGGAGATGGGGATCTTGATTCTCAACCTCGTGATATGGATCAAATGTTGTCCAGAATCAGACAACAGCTTGCTGGAGCTCCTTCTGAGAGGCAAAACTTGAAACCTTTTATGTCTAGGAGGAGCGATCAGAATCTTGAAGCTTTTTCTGAACGTCTAAGAGCAGCTGGTGAGAATAGTATTATGAATGCTCCTGCATTGATCAGTGAAGGTGTCCAAATGAAAACGCCGGTGAGTTCTTCGAATTTTTCTCAGTTGTTACTTAAAAGAGCTATGAAAGGGAAAGGGGTAGTAGGAAAGAACCAGGAAACTCCTCCTGAATTTGTCTCTGATCAAGATTTAGGAAGCAAGGAAAAAAAGTTGGATATTAGCAAGTCGCCTACTCCTCACGATGTGTTACCTCTAAAATCAAGTCCCAAAGGAAATGGTATGGTATCACATGGTGATGGGAATCATAGTAAATCTTCTATTGGAATCAGTTTGAGGGAGTTTCTTAGATCAAGTTATGCTAAAAGAGAAAAAAGACATGGCCTTTGTCTATTTAGGCAGCTGGTGGAACTGGTTGACTCAGCCCATTCAAAAAGATTATTCTTGCTAGACTTGAGACCATCCCTTTTCACTTTAGTTCCATCAAAGAAACTTAGATATATTGGTAATTTTGGAAAGAACGATCTAGAATCAGATGTTGACGAAGATTTGAATAGGAGGAGGCCTGTTGTTGAGGAATCATCTAGTGGAGGTAGGGATTCGAAGAAAAGAAAAATGGACTTGCATTTGAATTCTCCAGGGAATCAACTTCAGGCCACTTCAACCGGGCGACCTTTCAAAAGGAAAAGCCCTGTGATTGATTTAAACATGGTTGATGCACGTAATCCAGACAGTTGCGAGCTTCAACAGCAAGACTACATAAAAAATTTAAGCGTGTCTTCAGTGTCGAGAAAACAGTCTATGTCCACATGGCTAGAAGAGCAATGGTATACTTGTCCAGAGGAGATAAATGGAGAAGATATTGGAGAAAAATCAAATATTTATGCCCTTGGTGTTCTTCTGTTTGAGTTGCTATGCCATTGCGAGTCAGGCGAGATGCATGCTGCAATGATGGCAGATTTACGCCATCGGATTCTCCCACCAACATTTCTCTCGAAATACCCGAAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAACCCTCCTCCCGACCATCAGCTAGAGATATACTAAAGTCAGAGTTGATATGCGAGGATGATTCAGTTAAATCGACTGCTGCTGCTGAGGAGATATCTGAGCTGTTACTTCATTTTTTGTCTTCATTAGAAGTGCAGAAGAAGAAAAAAGCATCTAAACTTTTGCAAGATATCCAGACCTTAGAGGATGATATTAAGGAGGCCGAGCGAAGATATTCTTCAAATGTATCTCTGGTGAGATCTCATGGAGCTATTGAAAAAAGGGTGCAATCATCTCCCCTAGACGAGCACTGTACAACTTCCAGTGCCTTGTTTGTACCAACTGCTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTTTTCATGCGATCACAAATCAACTTATCGAGTTCTGCTGCTACTGCCCGTTCTGACAAAACACTAAAGGACAGGGACAGATGCTCTGAAAACCAAAATGAAAATCAGGATATGAGTACCAAAGGAAAATCTTCAGATCAACTCGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATAGCAAGTTCGAAACCTGTGGGACAATAAGAAGTGGGGACCTTTTAAACTCTGCAAGTGTGGTCTGCTCGTTGAGTTTTGACCCTGATGAAGAACACATAGCAGCAGCTGGGATATCAAAGAAGATCAAGATTTTTGACTTCAATGCATTTATGAATGAATCTGTCGGTGTTCATTATCCACTAGTAGAGATGGTCAACAAATCTAAATTAAGCTGTGTTTGCTGGAATAGCTACATCAAAAACTACTTGGCCTCGACTGACTACGATGGTGTAGTTCAGATATGGGATGCCGGCACTGGACAAGGATTTTCGCAGTACACAGAACACCAGAAGAGAGCCTGGTCAGTTGATTTTTCTCCATCTGACCCGACAAAATTTGTTAGTGGAAGTGATGACTGCTCGGTGAAGCTTTGGAGCATCAATGAGAAACGTTCATTAGGCACAATCTGGAGTCCAGCAAATGTGTGTTGCGTGCAATTCTCTTCTTATTCCAATCACTTATTGGCATTTGGGTCAGCTGATTACAAGGTCTATTGCTATGACCTTCGGTATGTCAAAACACCTTGGTGCACATTGGCTGGTCATGAGAAAGCGGTGAGTTATGTTAAATTTATGGATTCAGAAACCATTGTTTCTGCTTCCACTGATAACTCTCTCAAGCTTTGGAATCTTAACAAGACAAATTCCTCTGGTTTATCTCCTGGTGCTTGTTCATTGACATATAAAGGACATACAAATCAGAAGAATTTCGTTGGATTGTCGGTTTTGGACGGATACATAGCTTGTGGTTCAGAGACCAATGAGGTATATAGTTACTATAAATCTTTACCGATGCCAATGACTTCATACAAGTTTGGATCCGTCGATCCCATTTCTGGAAACGAATACTTTGATGACAATGGACAGTTTGTGTCGAGCGTCTGTTGGAGGAAAAAATCGAATATGCTTGTAGCTGCAAACTCTACTGGAAACATGAAGCTACTAAAACTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009648 GO:0009657 GO:0009658 GO:0009791 GO:0009987 GO:0010017 GO:0010099 GO:0010100 GO:0010114 GO:0010218 GO:0010228 GO:0016043 GO:0016604 GO:0022414 GO:0023052 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048519 GO:0048572 GO:0048573 GO:0048575 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080008 GO:0104004 GO:1902494 GO:1990234 GO:2000026 GO:2000028 GO:2000030 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

1029

Amino Acids

114.69

Weight (kDa)

7.06

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	427 - 527	1.7e-07	Protein kinase domain
WD40_WDHD1_1st	PF24817	707 - 810	2.8e-07	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	715 - 880	3.7e-15	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	716 - 881	2.9e-08	G protein beta WD-40 repeat protein
Beta-prop_RIG_2nd	PF23775	716 - 827	1.1e-08	RIG second beta-propeller
Beta-prop_WDR5	PF25175	717 - 970	3e-30	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	721 - 922	8.8e-11	WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	752 - 924	9.8e-09	WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3	PF25174	765 - 964	8.2e-22	THOC3 beta-propeller domain
Beta-prop_EML	PF23409	765 - 925	9.1e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19	PF24814	766 - 843	3.7e-08	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	771 - 920	4.9e-17	CDC20/Fizzy WD40 domain
WDR55	PF24796	778 - 928	1.7e-09	WDR55
EIF3I	PF24805	781 - 868	7.5e-08	EIF3I
WD40_WDHD1_1st	PF24817	804 - 926	5.5e-11	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	812 - 1026	7.3e-11	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	850 - 963	7.1e-10	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	851 - 926	5.6e-08	TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	851 - 921	1e-06	WDR36/Utp21 first beta-propeller
Beta-prop_EIPR1	PF23609	852 - 920	2.6e-07	EIPR1 beta-propeller
Beta-prop_WDR3_1st	PF25173	852 - 967	1.1e-10	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0007686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46340 AT2G46340
fragaria_vesca	FvH4_7g15970
malus_domestica	MD01G1076400.v1.1 MD07G1145300.v1.1
prunus_persica	Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1
pyrus_communis	pycom01g10530
rosa_chinensis	RchiOBHm_Chr1g0358871
rosa_laevigata	RLG00000027920
rosa_multiflora	Rmu_sc0008757.1_g000013
rosa_roxburghii	Rroxscaffold_4G00297550
rosa_rugosa	Rorug01G0265700 Rorug01G0265800 Rorug01G0265900 Rorug01G0266000
rosa_samantha	Rh1AG279700 Rh1BG246600 Rh1CG263700 Rh1DG275000
rosa_wichuraiana	Rw1G024850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1325
AciI	CCGC	4 cut(s)	188, 191, 207, 2687
AclI	AACGTT	1 cut(s)	2524
AclWI	GGATC	5 cut(s)	369, 396, 2946, 2954, 2959
AcsI	RAATTY	9 cut(s)	592, 668, 1126, 1261, 2081, 2468, 2702, 2776, 2839
AcuI	CTGAAG	4 cut(s)	45, 1130, 1260, 2028
AdeI	CACNNNGTG	2 cut(s)	742, 791
AfaI	GTAC	4 cut(s)	1831, 1854, 2029, 2411
AfiI	CCNNNNNNNGG	2 cut(s)	299, 2969
AhlI	ACTAGT	1 cut(s)	2275
AjnI	CCWGG	5 cut(s)	148, 651, 1132, 2432, 2794
AleI	CACNNNNGTG	1 cut(s)	2659
Alw21I	GWGCWC	3 cut(s)	430, 1827, 2666
Alw26I	GTCTC	3 cut(s)	679, 946, 2882
Alw44I	GTGCAC	1 cut(s)	2662
AlwI	GGATC	5 cut(s)	369, 396, 2946, 2954, 2959
AlwNI	CAGNNNCTG	2 cut(s)	131, 2201
AoxI	GGCC	5 cut(s)	877, 1058, 1149, 1737, 2343
ApaLI	GTGCAC	1 cut(s)	2662
ApeKI	GCWGC	9 cut(s)	512, 895, 1439, 1616, 1619, 1949, 2195, 2198, 3047
ApoI	RAATTY	9 cut(s)	592, 668, 1126, 1261, 2081, 2468, 2702, 2776, 2839
ArsI	GACNNNNNNTTYG	2 cut(s)	864, 896
Asp700I	GAANNNNTTC	3 cut(s)	1750, 2041, 2840
AspA2I	CCTAGG	1 cut(s)	293
AspS9I	GGNCC	1 cut(s)	2131
AsuC2I	CCSGG	1 cut(s)	1162
AsuHPI	GGTGA	7 cut(s)	127, 530, 592, 803, 1783, 2509, 2701
AsuII	TTCGAA	3 cut(s)	590, 1097, 2103
AvaII	GGWCC	1 cut(s)	2131
AvrII	CCTAGG	1 cut(s)	293
AxyI	CCTNAGG	1 cut(s)	198
BaeGI	GKGCMC	1 cut(s)	2666
BamHI	GGATCC	1 cut(s)	2951
BanII	GRGCYC	1 cut(s)	430
BauI	CACGAG	2 cut(s)	63, 378
BbsI	GAAGAC	2 cut(s)	1266, 1650
Bbv12I	GWGCWC	3 cut(s)	430, 1827, 2666
BbvCI	CCTCAGC	1 cut(s)	1623
BbvI	GCAGC	9 cut(s)	524, 907, 1426, 1603, 1606, 1936, 2207, 2210, 3034
BcgI	CGANNNNNNTGC	4 cut(s)	302, 336, 1418, 1452
BciT130I	CCWGG	5 cut(s)	150, 653, 1134, 2434, 2796
BciVI	GTATCC	1 cut(s)	2861
BclI	TGATCA	2 cut(s)	549, 679
BcnI	CCSGG	1 cut(s)	1162
BcoDI	GTCTC	3 cut(s)	679, 946, 2882
BcuI	ACTAGT	1 cut(s)	2275
BfmI	CTRYAG	1 cut(s)	250
BfuI	GTATCC	1 cut(s)	2861
BglII	AGATCT	1 cut(s)	1775
BlnI	CCTAGG	1 cut(s)	293
BlpI	GCTNAGC	2 cut(s)	157, 216
Bme1390I	CCNGG	6 cut(s)	150, 653, 1134, 1162, 2434, 2796
Bme18I	GGWCC	1 cut(s)	2131
BmgT120I	GGNCC	1 cut(s)	2131
BmiI	GGNNCC	2 cut(s)	2132, 2953
BmrFI	CCNGG	6 cut(s)	150, 653, 1134, 1162, 2434, 2796
BpiI	GAAGAC	2 cut(s)	1266, 1650
BpmI	CTGGAG	3 cut(s)	444, 1116, 2563
Bpu10I	CCTNAGC	1 cut(s)	1623
Bpu1102I	GCTNAGC	2 cut(s)	157, 216
Bpu14I	TTCGAA	3 cut(s)	590, 1097, 2103
BpuEI	CTTGAG	2 cut(s)	970, 2735
BpuMI	CCSGG	1 cut(s)	1162
BsaAI	YACGTR	1 cut(s)	1217
BsaBI	GATNNNNATC	4 cut(s)	360, 387, 480, 798
BsaI	GGTCTC	2 cut(s)	946, 2882
BsaJI	CCNNGG	4 cut(s)	293, 1133, 1384, 2657
Bsc4I	CCNNNNNNNGG	2 cut(s)	299, 2969
Bse118I	RCCGGY	2 cut(s)	577, 2384
Bse1I	ACTGG	4 cut(s)	912, 1839, 2395, 3064
Bse21I	CCTNAGG	1 cut(s)	198
Bse3DI	GCAATG	3 cut(s)	1325, 1414, 1449
Bse8I	GATNNNNATC	4 cut(s)	360, 387, 480, 798
BseBI	CCWGG	5 cut(s)	150, 653, 1134, 2434, 2796
BseDI	CCNNGG	4 cut(s)	293, 1133, 1384, 2657
BseGI	GGATG	6 cut(s)	76, 956, 1531, 1600, 1729, 2386
BseJI	GATNNNNATC	4 cut(s)	360, 387, 480, 798
BseLI	CCNNNNNNNGG	2 cut(s)	299, 2969
BseMI	GCAATG	3 cut(s)	1325, 1414, 1449
BseMII	CTCAG	7 cut(s)	171, 189, 426, 614, 930, 1614, 1626
BseNI	ACTGG	4 cut(s)	912, 1839, 2395, 3064
BseRI	GAGGAG	7 cut(s)	484, 651, 723, 1069, 1352, 1534, 1640
BseSI	GKGCMC	1 cut(s)	2666
BseXI	GCAGC	9 cut(s)	524, 907, 1426, 1603, 1606, 1936, 2207, 2210, 3034
BseYI	CCCAGC	1 cut(s)	2201
BsgI	GTGCAG	1 cut(s)	1691
BshFI	GGCC	5 cut(s)	879, 1060, 1151, 1739, 2345
BsiHKAI	GWGCWC	3 cut(s)	430, 1827, 2666
BsiSI	CCGG	3 cut(s)	578, 1161, 2385
BslFI	GGGAC	4 cut(s)	747, 2000, 2128, 2144
BslI	CCNNNNNNNGG	2 cut(s)	299, 2969
BsmAI	GTCTC	3 cut(s)	679, 946, 2882
BsmFI	GGGAC	4 cut(s)	747, 2000, 2128, 2144
BsmI	GAATGC	1 cut(s)	541
BsnI	GGCC	5 cut(s)	879, 1060, 1151, 1739, 2345
Bso31I	GGTCTC	2 cut(s)	946, 2882
Bsp119I	TTCGAA	3 cut(s)	590, 1097, 2103
Bsp1286I	GDGCHC	3 cut(s)	430, 1827, 2666
Bsp1407I	TGTACA	1 cut(s)	1829
Bsp1720I	GCTNAGC	2 cut(s)	157, 216
BspACI	CCGC	4 cut(s)	188, 191, 207, 2687
BspANI	GGCC	5 cut(s)	879, 1060, 1151, 1739, 2345
BspCNI	CTCAG	7 cut(s)	170, 190, 427, 613, 929, 1615, 1627
BspHI	TCATGA	1 cut(s)	2677
BspLI	GGNNCC	2 cut(s)	2132, 2953
BspPI	GGATC	5 cut(s)	369, 396, 2946, 2954, 2959
BspQI	GCTCTTC	1 cut(s)	1308
BspT104I	TTCGAA	3 cut(s)	590, 1097, 2103
BspTNI	GGTCTC	2 cut(s)	946, 2882
BsrDI	GCAATG	3 cut(s)	1325, 1414, 1449
BsrFI	RCCGGY	2 cut(s)	577, 2384
BsrGI	TGTACA	1 cut(s)	1829
BsrI	ACTGG	4 cut(s)	912, 1839, 2395, 3064
BssAI	RCCGGY	2 cut(s)	577, 2384
BssECI	CCNNGG	4 cut(s)	293, 1133, 1384, 2657
BssNAI	GTATAC	1 cut(s)	1326
BssSI	CACGAG	2 cut(s)	63, 378
BssT1I	CCWWGG	3 cut(s)	293, 1384, 2657
Bst1107I	GTATAC	1 cut(s)	1326
Bst2BI	CACGAG	2 cut(s)	63, 378
Bst2UI	CCWGG	5 cut(s)	150, 653, 1134, 2434, 2796
Bst4CI	ACNGT	6 cut(s)	34, 140, 1229, 1293, 1829, 3000
Bst6I	CTCTTC	4 cut(s)	225, 1308, 2420, 2581
BstAUI	TGTACA	1 cut(s)	1829
BstBAI	YACGTR	1 cut(s)	1217
BstBI	TTCGAA	3 cut(s)	590, 1097, 2103
BstC8I	GCNNGC	6 cut(s)	301, 420, 1235, 1437, 2386, 2567
BstF5I	GGATG	6 cut(s)	76, 956, 1531, 1600, 1729, 2386
BstMAI	GTCTC	3 cut(s)	679, 946, 2882
BstMWI	GCNNNNNNNGC	9 cut(s)	212, 347, 1243, 1315, 1425, 1448, 1955, 2313, 2322
BstNI	CCWGG	5 cut(s)	150, 653, 1134, 2434, 2796
BstNSI	RCATGY	1 cut(s)	1439
BstSCI	CCNGG	6 cut(s)	148, 651, 1132, 1160, 2432, 2794
BstSFI	CTRYAG	1 cut(s)	250
BstSLI	GKGCMC	1 cut(s)	2666
BstV1I	GCAGC	9 cut(s)	524, 907, 1426, 1603, 1606, 1936, 2207, 2210, 3034
BstV2I	GAAGAC	2 cut(s)	1266, 1650
BstX2I	RGATCY	3 cut(s)	361, 1775, 2951
BstYI	RGATCY	3 cut(s)	361, 1775, 2951
BstZ17I	GTATAC	1 cut(s)	1326
Bsu36I	CCTNAGG	1 cut(s)	198
BsuI	GTATCC	1 cut(s)	2861
BsuRI	GGCC	5 cut(s)	879, 1060, 1151, 1739, 2345
BtsCI	GGATG	6 cut(s)	76, 956, 1531, 1600, 1729, 2386
BtsIMutI	CAGTG	7 cut(s)	145, 559, 1284, 1825, 1846, 2388, 2736
Cac8I	GCNNGC	6 cut(s)	301, 420, 1235, 1437, 2386, 2567
CaiI	CAGNNNCTG	2 cut(s)	131, 2201
CciI	TCATGA	1 cut(s)	2677
Cfr10I	RCCGGY	2 cut(s)	577, 2384
Cfr13I	GGNCC	1 cut(s)	2131
CseI	GACGC	1 cut(s)	3001
Csp6I	GTAC	4 cut(s)	1830, 1853, 2028, 2410
CviAII	CATG	9 cut(s)	788, 875, 1204, 1305, 1436, 1781, 1918, 2678, 3067
CviQI	GTAC	4 cut(s)	1830, 1853, 2028, 2410
DraI	TTTAAA	2 cut(s)	1200, 2139
DraIII	CACNNNGTG	2 cut(s)	742, 791
Eam1104I	CTCTTC	4 cut(s)	225, 1308, 2420, 2581
EarI	CTCTTC	4 cut(s)	225, 1308, 2420, 2581
Ecl136II	GAGCTC	1 cut(s)	428
Eco130I	CCWWGG	3 cut(s)	293, 1384, 2657
Eco147I	AGGCCT	1 cut(s)	1060
Eco24I	GRGCYC	1 cut(s)	430
Eco31I	GGTCTC	2 cut(s)	946, 2882
Eco32I	GATATC	3 cut(s)	1632, 1708, 2208
Eco47I	GGWCC	1 cut(s)	2131
Eco53kI	GAGCTC	1 cut(s)	428
Eco57I	CTGAAG	4 cut(s)	45, 1130, 1260, 2028
Eco81I	CCTNAGG	1 cut(s)	198
EcoICRI	GAGCTC	1 cut(s)	428
EcoO109I	RGGNCCY	1 cut(s)	2131
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	5 cut(s)	148, 651, 1132, 2432, 2794
EcoRV	GATATC	3 cut(s)	1632, 1708, 2208
EcoT14I	CCWWGG	3 cut(s)	293, 1384, 2657
EcoT22I	ATGCAT	3 cut(s)	1437, 1909, 2242
EcoT38I	GRGCYC	1 cut(s)	430
ErhI	CCWWGG	3 cut(s)	293, 1384, 2657
FaeI	CATG	9 cut(s)	791, 878, 1207, 1308, 1439, 1784, 1921, 2681, 3070
FalI	AAGNNNNNCTT	4 cut(s)	1258, 1290, 1738, 1770
FaqI	GGGAC	4 cut(s)	747, 2000, 2128, 2144
FatI	CATG	9 cut(s)	787, 874, 1203, 1304, 1435, 1780, 1917, 2677, 3066
FbaI	TGATCA	2 cut(s)	549, 679
FblI	GTMKAC	1 cut(s)	1325
FokI	GGATG	6 cut(s)	83, 943, 1518, 1607, 1736, 2393
FriOI	GRGCYC	1 cut(s)	430
GsaI	CCCAGC	1 cut(s)	2205
GsuI	CTGGAG	3 cut(s)	444, 1116, 2563
HaeIII	GGCC	5 cut(s)	879, 1060, 1151, 1739, 2345
HapII	CCGG	3 cut(s)	578, 1161, 2385
HgaI	GACGC	1 cut(s)	3001
Hin1II	CATG	9 cut(s)	791, 878, 1207, 1308, 1439, 1784, 1921, 2681, 3070
HincII	GTYRAC	5 cut(s)	237, 913, 1036, 1895, 2290
HindII	GTYRAC	5 cut(s)	237, 913, 1036, 1895, 2290
HindIII	AAGCTT	5 cut(s)	89, 218, 489, 2501, 2753
HpaII	CCGG	3 cut(s)	578, 1161, 2385
HphI	GGTGA	7 cut(s)	127, 530, 592, 803, 1783, 2509, 2701
Hpy166II	GTNNAC	9 cut(s)	237, 913, 1036, 1302, 1326, 1895, 2290, 2412, 2664
Hpy8I	GTNNAC	9 cut(s)	237, 913, 1036, 1302, 1326, 1895, 2290, 2412, 2664
Hpy99I	CGWCG	1 cut(s)	2960
HpyAV	CCTTC	4 cut(s)	441, 551, 1495, 2648
HpyCH4III	ACNGT	6 cut(s)	34, 140, 1229, 1293, 1829, 3000
HpyCH4IV	ACGT	3 cut(s)	502, 1216, 2524
HpyF10VI	GCNNNNNNNGC	9 cut(s)	212, 347, 1243, 1315, 1425, 1448, 1955, 2313, 2322
HpySE526I	ACGT	3 cut(s)	502, 1216, 2524
Hsp92II	CATG	9 cut(s)	791, 878, 1207, 1308, 1439, 1784, 1921, 2681, 3070
KroI	GCCGGC	1 cut(s)	2384
KroNI	GCCGGC	1 cut(s)	2386
Ksp22I	TGATCA	2 cut(s)	549, 679
LguI	GCTCTTC	1 cut(s)	1308
LmnI	GCTCC	7 cut(s)	212, 425, 433, 471, 544, 1784, 2508
Lsp1109I	GCAGC	9 cut(s)	524, 907, 1426, 1603, 1606, 1936, 2207, 2210, 3034
MaeII	ACGT	3 cut(s)	502, 1216, 2524
MaeIII	GTNAC	4 cut(s)	606, 744, 1641, 2906
MfeI	CAATTG	1 cut(s)	53
MflI	RGATCY	3 cut(s)	361, 1775, 2951
MhlI	GDGCHC	3 cut(s)	430, 1827, 2666
MlyI	GAGTC	3 cut(s)	908, 1430, 2554
MmeI	TCCRAC	3 cut(s)	690, 2827, 2999
Mph1103I	ATGCAT	3 cut(s)	1437, 1909, 2242
MroNI	GCCGGC	1 cut(s)	2384
MroXI	GAANNNNTTC	3 cut(s)	1750, 2041, 2840
MseI	TTAA	9 cut(s)	612, 1199, 1265, 1605, 1731, 2138, 2303, 2700, 2766
MslI	CAYNNNNRTG	3 cut(s)	168, 792, 2659
MspA1I	CMGCKG	4 cut(s)	515, 898, 2201, 2612
MspI	CCGG	3 cut(s)	578, 1161, 2385
MspR9I	CCNGG	6 cut(s)	150, 653, 1134, 1162, 2434, 2796
MunI	CAATTG	1 cut(s)	53
Mva1269I	GAATGC	1 cut(s)	541
MvaI	CCWGG	5 cut(s)	150, 653, 1134, 2434, 2796
MwoI	GCNNNNNNNGC	9 cut(s)	212, 347, 1243, 1315, 1425, 1448, 1955, 2313, 2322
NaeI	GCCGGC	1 cut(s)	2386
NciI	CCSGG	1 cut(s)	1162
NgoMIV	GCCGGC	1 cut(s)	2384
NlaIII	CATG	9 cut(s)	791, 878, 1207, 1308, 1439, 1784, 1921, 2681, 3070
NlaIV	GGNNCC	2 cut(s)	2132, 2953
NmeAIII	GCCGAG	1 cut(s)	1765
NsiI	ATGCAT	3 cut(s)	1437, 1909, 2242
NspI	RCATGY	1 cut(s)	1439
NspV	TTCGAA	3 cut(s)	590, 1097, 2103
OliI	CACNNNNGTG	1 cut(s)	2659
PaeI	GCATGC	1 cut(s)	1439
PagI	TCATGA	1 cut(s)	2677
PceI	AGGCCT	1 cut(s)	1060
PciSI	GCTCTTC	1 cut(s)	1308
PcsI	WCGNNNNNNNCGW	1 cut(s)	1496
PctI	GAATGC	1 cut(s)	541
PdiI	GCCGGC	1 cut(s)	2386
PdmI	GAANNNNTTC	3 cut(s)	1750, 2041, 2840
PfoI	TCCNGGA	1 cut(s)	148
PleI	GAGTC	3 cut(s)	908, 1429, 2553
PpsI	GAGTC	3 cut(s)	908, 1429, 2553
Ppu21I	YACGTR	1 cut(s)	1217
PpuMI	RGGWCCY	1 cut(s)	2131
Psp124BI	GAGCTC	1 cut(s)	430
Psp1406I	AACGTT	1 cut(s)	2524
Psp5II	RGGWCCY	1 cut(s)	2131
Psp6I	CCWGG	5 cut(s)	148, 651, 1132, 2432, 2794
PspFI	CCCAGC	1 cut(s)	2201
PspGI	CCWGG	5 cut(s)	148, 651, 1132, 2432, 2794
PspN4I	GGNNCC	2 cut(s)	2132, 2953
PspPI	GGNCC	1 cut(s)	2131
PspPPI	RGGWCCY	1 cut(s)	2131
PsrI	GAACNNNNNNTAC	2 cut(s)	2084, 2116
PstNI	CAGNNNCTG	2 cut(s)	131, 2201
PsuI	RGATCY	3 cut(s)	361, 1775, 2951
PvuII	CAGCTG	4 cut(s)	515, 898, 2201, 2612
RsaI	GTAC	4 cut(s)	1831, 1854, 2029, 2411
RsaNI	GTAC	4 cut(s)	1830, 1853, 2028, 2410
RseI	CAYNNNNRTG	3 cut(s)	168, 792, 2659
SacI	GAGCTC	1 cut(s)	430
SapI	GCTCTTC	1 cut(s)	1308
SaqAI	TTAA	9 cut(s)	612, 1199, 1265, 1605, 1731, 2138, 2303, 2700, 2766
Sau96I	GGNCC	1 cut(s)	2131
SchI	GAGTC	3 cut(s)	908, 1430, 2554
ScrFI	CCNGG	6 cut(s)	150, 653, 1134, 1162, 2434, 2796
SduI	GDGCHC	3 cut(s)	430, 1827, 2666
SfcI	CTRYAG	1 cut(s)	250
SfuI	TTCGAA	3 cut(s)	590, 1097, 2103
SgrAI	CRCCGGYG	1 cut(s)	577
SinI	GGWCC	1 cut(s)	2131
SmiMI	CAYNNNNRTG	3 cut(s)	168, 792, 2659
SmlI	CTYRAG	2 cut(s)	949, 2750
SmoI	CTYRAG	2 cut(s)	949, 2750
SpeI	ACTAGT	1 cut(s)	2275
SphI	GCATGC	1 cut(s)	1439
SseBI	AGGCCT	1 cut(s)	1060
SsiI	CCGC	4 cut(s)	188, 191, 207, 2687
SspI	AATATT	1 cut(s)	1375
SstI	GAGCTC	1 cut(s)	430
StuI	AGGCCT	1 cut(s)	1060
StyD4I	CCNGG	6 cut(s)	148, 651, 1132, 1160, 2432, 2794
StyI	CCWWGG	3 cut(s)	293, 1384, 2657
TaaI	ACNGT	6 cut(s)	34, 140, 1229, 1293, 1829, 3000
TaiI	ACGT	3 cut(s)	505, 1219, 2527
TatI	WGTACW	2 cut(s)	1829, 2409
TauI	GCSGC	3 cut(s)	190, 193, 209
Tru1I	TTAA	9 cut(s)	612, 1199, 1265, 1605, 1731, 2138, 2303, 2700, 2766
Tru9I	TTAA	9 cut(s)	612, 1199, 1265, 1605, 1731, 2138, 2303, 2700, 2766
TscAI	CASTG	7 cut(s)	145, 559, 1284, 1832, 1846, 2395, 2743
TseI	GCWGC	9 cut(s)	512, 895, 1439, 1616, 1619, 1949, 2195, 2198, 3047
TspGWI	ACGGA	3 cut(s)	1880, 2880, 2944
TspRI	CASTG	7 cut(s)	145, 559, 1284, 1832, 1846, 2395, 2743
VneI	GTGCAC	1 cut(s)	2662
VpaK11BI	GGWCC	1 cut(s)	2131
XapI	RAATTY	9 cut(s)	592, 668, 1126, 1261, 2081, 2468, 2702, 2776, 2839
XbaI	TCTAGA	1 cut(s)	1021
XceI	RCATGY	1 cut(s)	1439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2593
XmaJI	CCTAGG	1 cut(s)	293
XmiI	GTMKAC	1 cut(s)	1325
XmnI	GAANNNNTTC	3 cut(s)	1750, 2041, 2840
Zsp2I	ATGCAT	3 cut(s)	1437, 1909, 2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.