Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007686

Physical Location & Seq

Genomic Coordinates Reverse (-)

13743289 .. 13751113

Gene Structure 7825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g15970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2874 bp

ATGCGCACATTGGCAGGTAGTAATTGGCCAGAAAGCTTGACCAATAATTGTAGTTCTAATATGGAGGACAAGGATTTGAGTTCTGGATATGAGGCACTTCGTAAAAGTCCCCATTCCATAACTGGCATTGCCCCTGCTGCTAAAGAGTTAAAATTGAAAAATCCAAGGAAACCAAACTCAGCTGATTATAGTCAGGGAGGAAGTGGATTTAGAAGTAAGGATTCACATGGTGATTCTGTGTCAGAAGATAATGATCAGATATTGCTGAGAGTTAGACGTGAGCTTAGAGAAATGCATTCTAGCGTTCGAAGTCTGAAGCCTTCTTCAAGCAATTCCTCTGAGCAAGACACTGATAAAATGTTGGCATATGTAAGGGCTAGGAACAGCAAGATCATCTCAAGCAATATGCTAAGTATTGCCAAAAAGCAGCTGAAAATCCATTCTACTAATAGCCATCTTCAATCTCTTGTGAAGGAAACATCGAAGGGAAAGGGTATCAGTAAAATTTCAGTTATGGACCAGAAGGTATCTTGCGGTACAAGGATGAAATCATTTATGCAAAATGGTCAGCATTCTTCAGTTGTCCTTGATAGGTCTGGTCCAGAATCTGTCAGTACTGGGATTTGCCTGAGGGAGTGGCTTGAACCTGGTTGTCACAAGGTAGATAGAGCTGAAAGACTGCTCATATTTAGGCAGATTGTGGAGTTGGTGGATTTTGCACATTGTCAAGGTGTTGCCTTGCAAGAGTTGCGGCCATCACGCTTCATTTTATTGCCATCAAATGTTATTAAATATACTGGAGCCATCATACGATCAGATAGTATCGTGAACCGAGATTTGAGTAAGAAGAGGCTATTAGAGCAAGGGGACTGTGCTGGACGTAATGTAGGTGGAAAACAGCAAAAACTGAGTGATAAGATGATAACCACGAGTGGTGGCTCTGGGACTAAAGAACGTACTGAGAAGGAGTTCTGCATAGATCCTGAAGATTCTGGGTATGGTGAACTCCAGTTCCAGAATACATTACTTTTACCCAAACAACAAACCATTTCTGCAACAGTTCATTTGGAAGAGACGTGGTATACTAGCCCAGAGGATCTCAGTGAGATAGGCTGTACACTTTCATCAAATGTCTATGGCCTCGGCATTCTTCTTTTTGAGTTGTTGTGCTGCTGTGAATCTTGGGAGGTGCATTCTGCAGTGATGTCGGATTTGTACCATCGAATCCTACCACCATATTTTCTTTCACGAAGTCCAAAGGAAGCTGGCTTCTGCTTTTGGCTTCTCCATCCTGAACCTTTATCTCGTCCAACATCCAGAGAAATCTTGCAGTCTGAACTCTTAGGTGGACACCAAGAAGCGTATTGTTGTGATGATTTCTCAAATTTTAATGATGATCTTGATGCAGAATCTGAGTTGCGCAGTTTTCTTCTCTCATTAAAGGACAGGAAGCATGGGCATGCCTCTAAGTTAATCGAAGATATAAGATGCTTAGAAGAAGATATAAGCAAGTTTACGACGAGGGACTTGTCAGGGGCATCCTCAGATTATTTCAGGGCACCCGATCAGCTTTCCTGTCAAAGAGAACAGGGATTTTGTCTGGAAGAGCCTGTACGTTCCGGTGCTTCGTCTAGACTATTCTCAGATTCAGACATGAATGAGGCACAAATGATGAAAAGTATCAGTCAGCTAGACGGTGCCTACTTCTCCGCAAGATCCCAAATGCTGGTAACGGAAACTGCTTCTGCAGCAGAATCTAATAAGGACTTGTTAGACAAGCGAGATAATGTGCGAAATGATTCTCAAGATTTAAGCATCAATAAGAAATCAGGTGATCCCCTTGGGGCCTTTTTCAATGGCCTCTCCAAGTATGCTTGCCACAAAAAGTTTAAAGAATGTGGGACACTAAGGAATGCAGATCTTCACAACTCTTCCAGTGCAATCTGCTCTTTAAGTTTCGACCGTGATGAGGACTATATTGCTACAGCCGGAGTATCAAAGAAAATCAAAATCTTTGATTTTGGTGCCCTTGTAGACAACTGTTTAGACATCTATTATCCTTCAGTTGAGATGTCGAACAATTCTAGGCTGAGCTCTGTTTGCTGGAACAACTACTTTAGGAGCTATCTCGCATCATCAGATTATGATGGAGTGGTAAAGATATGGGATGCAAACACCGGTCAAGGAATTTGTCAGCATAAAGAACACCAAAGGAGGGCTTGGTCTGTCGACTTTTCTCAAGCTGACCCAACAAAGTTTGCTAGTGGAAGTGATGACTTTTCAGTGAGATTGTGGGATGTTAAAGAGGAAAATTCAATAAACACGATCTGGAACCCTGCTAATGTCTGCTTTGTTCAGTTCTCCGCTTACTCTTCTCATCTCTTAATTCTTGGATGTGCTGATTACAAGGTCTACGGCTATGATCTTCGGCATACTAAATTGCCTTGGTGTACTTTACCGGGTCATGCAAAAGCTGTTAGCTATGTCAGGTGTGTAGATAAAGAAACTCTAGTTTCCGCTTCGACAGACAACACTCTGAAGCTTTGGGATCTTAACAAATCTAGTTCAACCGGGTTGTCTTCCAATGCGTGCAGCTTAACTTTTAGTGGTCATACTAATGAGAAGAATTTTGTAGGTTTATCTGTTTTTGATGGATACATAGCATGCGGTTCAGAAACTAACGAGGTTTATAGTTATCACAGAAGTCTACCCATTCCAATCACTTCTCACAAATTTGGATCTATTGATCCTGTCCCTAGAAGGGAGGTTGGTGATAGTGGACCGTATGTCTCAAGTGTCTGTTGGCGAAGAAAGTCTAACACACTTGTTGCTGCCAACTCAAGTGGAACAATGAAATTATTGCAGATAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009648 GO:0009657 GO:0009658 GO:0009791 GO:0009987 GO:0010017 GO:0010099 GO:0010100 GO:0010114 GO:0010218 GO:0010228 GO:0016043 GO:0016604 GO:0022414 GO:0023052 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048519 GO:0048572 GO:0048573 GO:0048575 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080008 GO:0104004 GO:1902494 GO:1990234 GO:2000026 GO:2000028 GO:2000030 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

958

Amino Acids

106.62

Weight (kDa)

6.51

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_WDHD1_1st	PF24817	639 - 779	2.4e-06	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	641 - 808	6.8e-14	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	642 - 900	1.5e-27	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	648 - 770	4.8e-07	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	695 - 813	5.5e-14	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	696 - 794	1.6e-09	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	709 - 856	2.7e-09	WDHD1 first WD40 domain
WDR55	PF24796	709 - 862	5e-10	WDR55
WD40_Prp19	PF24814	710 - 777	1.7e-06	Prp19 WD40 domain
EIF3I	PF24805	710 - 796	2.3e-08	EIF3I
Beta-prop_WDR36-Utp21_1st	PF25171	716 - 849	3.2e-08	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	730 - 856	7e-12	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	748 - 865	6.4e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	751 - 899	1.1e-13	WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	751 - 863	2.8e-06	WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	754 - 869	9.7e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_EIPR1	PF23609	772 - 849	5.3e-06	EIPR1 beta-propeller
WD40_Prp19	PF24814	780 - 892	3.5e-07	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	794 - 955	1.4e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46340 AT2G46340
fragaria_vesca	FvH4_7g15970
malus_domestica	MD01G1076400.v1.1 MD07G1145300.v1.1
prunus_persica	Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1
pyrus_communis	pycom01g10530
rosa_chinensis	RchiOBHm_Chr1g0358871
rosa_laevigata	RLG00000027920
rosa_multiflora	Rmu_sc0008757.1_g000013
rosa_roxburghii	Rroxscaffold_4G00297550
rosa_rugosa	Rorug01G0265700 Rorug01G0265800 Rorug01G0265900 Rorug01G0266000
rosa_samantha	Rh1AG279700 Rh1BG246600 Rh1CG263700 Rh1DG275000
rosa_wichuraiana	Rw1G024850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	5, 1421
Acc36I	ACCTGC	1 cut(s)	5
AccB1I	GGYRCC	3 cut(s)	1558, 1697, 2024
AccB7I	CCANNNNNTGG	1 cut(s)	1726
AccI	GTMKAC	5 cut(s)	1082, 2034, 2229, 2412, 2707
AciI	CCGC	6 cut(s)	534, 751, 1710, 2364, 2517, 2667
AclWI	GGATC	7 cut(s)	974, 1104, 1710, 1829, 2556, 2741, 2746
AcoI	YGGCCR	2 cut(s)	26, 752
AcsI	RAATTY	6 cut(s)	504, 1384, 2187, 2311, 2626, 2732
AcuI	CTGAAG	5 cut(s)	335, 561, 1005, 2046, 2558
AdeI	CACNNNGTG	1 cut(s)	230
AfaI	GTAC	7 cut(s)	538, 616, 958, 1117, 1217, 1614, 2452
AfiI	CCNNNNNNNGG	4 cut(s)	1726, 1969, 2215, 2761
AgeI	ACCGGT	1 cut(s)	2177
AgsI	TTSAA	7 cut(s)	157, 327, 461, 644, 1855, 2316, 2568
AhdI	GACNNNNNGTC	1 cut(s)	2786
AjiI	CACGTC	2 cut(s)	278, 1077
AjnI	CCWGG	1 cut(s)	646
AloI	GAACNNNNNNTCC	2 cut(s)	996, 1028
Alw21I	GWGCWC	1 cut(s)	2096
Alw26I	GTCTC	2 cut(s)	1067, 2794
AlwI	GGATC	7 cut(s)	974, 1104, 1710, 1829, 2556, 2741, 2746
AlwNI	CAGNNNCTG	2 cut(s)	608, 1412
AoxI	GGCC	5 cut(s)	26, 752, 1138, 1845, 1858
ApeKI	GCWGC	6 cut(s)	137, 427, 1170, 1748, 2592, 2831
ApoI	RAATTY	6 cut(s)	504, 1384, 2187, 2311, 2626, 2732
AsiGI	ACCGGT	1 cut(s)	2177
Asp700I	GAANNNNTTC	2 cut(s)	968, 1798
AspLEI	GCGC	2 cut(s)	6, 1422
AspS9I	GGNCC	4 cut(s)	517, 599, 1845, 2780
AsuC2I	CCSGG	2 cut(s)	2460, 2572
AsuHPI	GGTGA	4 cut(s)	242, 1013, 1844, 2783
AsuII	TTCGAA	1 cut(s)	307
AvaII	GGWCC	3 cut(s)	517, 599, 2780
AxyI	CCTNAGG	1 cut(s)	629
BaeGI	GKGCMC	2 cut(s)	1561, 2029
BalI	TGGCCA	1 cut(s)	28
BanI	GGYRCC	3 cut(s)	1558, 1697, 2024
BanII	GRGCYC	1 cut(s)	2096
BarI	GAAGNNNNNNTAC	2 cut(s)	1596, 1628
BauI	CACGAG	1 cut(s)	928
BbsI	GAAGAC	1 cut(s)	2571
Bbv12I	GWGCWC	1 cut(s)	2096
BbvI	GCAGC	6 cut(s)	124, 439, 1157, 1760, 2604, 2818
BccI	CCATC	8 cut(s)	462, 763, 784, 812, 1227, 1296, 2141, 2645
BceAI	ACGGC	1 cut(s)	2431
BcgI	CGANNNNNNTGC	2 cut(s)	1188, 1222
BciT130I	CCWGG	1 cut(s)	648
BciVI	GTATCC	1 cut(s)	2648
BclI	TGATCA	1 cut(s)	253
BcnI	CCSGG	2 cut(s)	2460, 2572
BcoDI	GTCTC	2 cut(s)	1067, 2794
BfmI	CTRYAG	3 cut(s)	1197, 1746, 1983
BfuAI	ACCTGC	1 cut(s)	5
BfuI	GTATCC	1 cut(s)	2648
BglII	AGATCT	1 cut(s)	1918
BisI	GCNGC	7 cut(s)	138, 428, 752, 1171, 1749, 2593, 2832
BlpI	GCTNAGC	1 cut(s)	2090
BlsI	GCNGC	7 cut(s)	139, 429, 753, 1172, 1750, 2594, 2833
BmcAI	AGTACT	1 cut(s)	616
Bme1390I	CCNGG	3 cut(s)	648, 2460, 2572
Bme18I	GGWCC	3 cut(s)	517, 599, 2780
BmeRI	GACNNNNNGTC	1 cut(s)	2786
BmgBI	CACGTC	2 cut(s)	278, 1077
BmgT120I	GGNCC	4 cut(s)	517, 599, 1845, 2780
BmiI	GGNNCC	6 cut(s)	802, 1560, 1699, 1846, 2026, 2333
BmrFI	CCNGG	3 cut(s)	648, 2460, 2572
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	6 cut(s)	1393, 1478, 1547, 1824, 2141, 2158
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	1 cut(s)	2571
BpmI	CTGGAG	2 cut(s)	819, 992
Bpu1102I	GCTNAGC	1 cut(s)	2090
Bpu14I	TTCGAA	1 cut(s)	307
BpuEI	CTTGAG	5 cut(s)	382, 1788, 2223, 2776, 2824
BpuMI	CCSGG	2 cut(s)	2460, 2572
BsaBI	GATNNNNATC	1 cut(s)	252
BsaJI	CCNNGG	4 cut(s)	164, 1141, 1840, 2444
BsaWI	WCCGGW	2 cut(s)	1619, 2177
Bsc4I	CCNNNNNNNGG	4 cut(s)	1726, 1969, 2215, 2761
Bse118I	RCCGGY	1 cut(s)	2177
Bse1I	ACTGG	5 cut(s)	127, 622, 802, 1009, 1935
Bse21I	CCTNAGG	1 cut(s)	629
Bse3DI	GCAATG	1 cut(s)	126
Bse8I	GATNNNNATC	1 cut(s)	252
BseBI	CCWGG	1 cut(s)	648
BseDI	CCNNGG	4 cut(s)	164, 1141, 1840, 2444
BseGI	GGATG	7 cut(s)	549, 1288, 1313, 1538, 2173, 2302, 2399
BseJI	GATNNNNATC	1 cut(s)	252
BseLI	CCNNNNNNNGG	4 cut(s)	1726, 1969, 2215, 2761
BseMI	GCAATG	1 cut(s)	126
BseNI	ACTGG	5 cut(s)	127, 622, 802, 1009, 1935
BseSI	GKGCMC	2 cut(s)	1561, 2029
BseXI	GCAGC	6 cut(s)	124, 439, 1157, 1760, 2604, 2818
BsgI	GTGCAG	1 cut(s)	2611
Bsh1285I	CGRYCG	1 cut(s)	1963
BshFI	GGCC	5 cut(s)	28, 754, 1140, 1847, 1860
BshNI	GGYRCC	3 cut(s)	1558, 1697, 2024
BshTI	ACCGGT	1 cut(s)	2177
BsiEI	CGRYCG	1 cut(s)	1963
BsiHKAI	GWGCWC	1 cut(s)	2096
BsiSI	CCGG	5 cut(s)	1620, 1989, 2178, 2459, 2571
BslFI	GGGAC	6 cut(s)	93, 881, 958, 1538, 1915, 2738
BslI	CCNNNNNNNGG	4 cut(s)	1726, 1969, 2215, 2761
BsmAI	GTCTC	2 cut(s)	1067, 2794
BsmBI	CGTCTC	1 cut(s)	1067
BsmFI	GGGAC	6 cut(s)	93, 881, 958, 1538, 1915, 2738
BsmI	GAATGC	5 cut(s)	295, 571, 1146, 1192, 1918
BsnI	GGCC	5 cut(s)	28, 754, 1140, 1847, 1860
Bsp119I	TTCGAA	1 cut(s)	307
Bsp1286I	GDGCHC	3 cut(s)	1561, 2029, 2096
Bsp1407I	TGTACA	1 cut(s)	1115
Bsp1720I	GCTNAGC	1 cut(s)	2090
BspACI	CCGC	6 cut(s)	534, 751, 1710, 2364, 2517, 2667
BspANI	GGCC	5 cut(s)	28, 754, 1140, 1847, 1860
BspLI	GGNNCC	6 cut(s)	802, 1560, 1699, 1846, 2026, 2333
BspMAI	CTGCAG	2 cut(s)	1201, 1750
BspMI	ACCTGC	1 cut(s)	5
BspPI	GGATC	7 cut(s)	974, 1104, 1710, 1829, 2556, 2741, 2746
BspQI	GCTCTTC	1 cut(s)	1599
BspT104I	TTCGAA	1 cut(s)	307
BspT107I	GGYRCC	3 cut(s)	1558, 1697, 2024
BsrDI	GCAATG	1 cut(s)	126
BsrFI	RCCGGY	1 cut(s)	2177
BsrGI	TGTACA	1 cut(s)	1115
BsrI	ACTGG	5 cut(s)	127, 622, 802, 1009, 1935
BssAI	RCCGGY	1 cut(s)	2177
BssECI	CCNNGG	4 cut(s)	164, 1141, 1840, 2444
BssNAI	GTATAC	1 cut(s)	1083
BssSI	CACGAG	1 cut(s)	928
BssT1I	CCWWGG	3 cut(s)	164, 1840, 2444
Bst1107I	GTATAC	1 cut(s)	1083
Bst2BI	CACGAG	1 cut(s)	928
Bst2UI	CCWGG	1 cut(s)	648
Bst4CI	ACNGT	6 cut(s)	872, 1060, 1697, 1964, 2042, 2784
Bst6I	CTCTTC	5 cut(s)	842, 1065, 1599, 1936, 2377
BstAPI	GCANNNNNTGC	1 cut(s)	748
BstAUI	TGTACA	1 cut(s)	1115
BstBI	TTCGAA	1 cut(s)	307
BstC8I	GCNNGC	5 cut(s)	1267, 1461, 1876, 2590, 2665
BstF5I	GGATG	7 cut(s)	549, 1288, 1313, 1538, 2173, 2302, 2399
BstHHI	GCGC	2 cut(s)	6, 1422
BstMAI	GTCTC	2 cut(s)	1067, 2794
BstMCI	CGRYCG	1 cut(s)	1963
BstMWI	GCNNNNNNNGC	5 cut(s)	137, 748, 859, 1748, 2100
BstNI	CCWGG	1 cut(s)	648
BstNSI	RCATGY	2 cut(s)	1463, 2667
BstSCI	CCNGG	3 cut(s)	646, 2458, 2570
BstSFI	CTRYAG	3 cut(s)	1197, 1746, 1983
BstSLI	GKGCMC	2 cut(s)	1561, 2029
BstV1I	GCAGC	6 cut(s)	124, 439, 1157, 1760, 2604, 2818
BstV2I	GAAGAC	1 cut(s)	2571
BstX2I	RGATCY	6 cut(s)	979, 1096, 1715, 1918, 2548, 2738
BstYI	RGATCY	6 cut(s)	979, 1096, 1715, 1918, 2548, 2738
BstZ17I	GTATAC	1 cut(s)	1083
Bsu36I	CCTNAGG	1 cut(s)	629
BsuI	GTATCC	1 cut(s)	2648
BsuRI	GGCC	5 cut(s)	28, 754, 1140, 1847, 1860
BtrI	CACGTC	2 cut(s)	278, 1077
BtsCI	GGATG	7 cut(s)	549, 1288, 1313, 1538, 2173, 2302, 2399
BtsI	GCAGTG	1 cut(s)	1206
BtsIMutI	CAGTG	5 cut(s)	348, 1108, 1206, 1942, 2289
BveI	ACCTGC	1 cut(s)	5
Cac8I	GCNNGC	5 cut(s)	1267, 1461, 1876, 2590, 2665
CaiI	CAGNNNCTG	2 cut(s)	608, 1412
CfoI	GCGC	2 cut(s)	6, 1422
Cfr10I	RCCGGY	1 cut(s)	2177
Cfr13I	GGNCC	4 cut(s)	517, 599, 1845, 2780
CsiI	ACCWGGT	1 cut(s)	646
Csp6I	GTAC	7 cut(s)	537, 615, 957, 1116, 1216, 1613, 2451
CspAI	ACCGGT	1 cut(s)	2177
CspCI	CAANNNNNGTGG	2 cut(s)	2824, 2859
CviAII	CATG	6 cut(s)	227, 1454, 1460, 1654, 2465, 2664
CviQI	GTAC	7 cut(s)	537, 615, 957, 1116, 1216, 1613, 2451
DraI	TTTAAA	1 cut(s)	1891
DraIII	CACNNNGTG	1 cut(s)	230
DriI	GACNNNNNGTC	1 cut(s)	2786
EaeI	YGGCCR	2 cut(s)	26, 752
Eam1104I	CTCTTC	5 cut(s)	842, 1065, 1599, 1936, 2377
Eam1105I	GACNNNNNGTC	1 cut(s)	2786
EarI	CTCTTC	5 cut(s)	842, 1065, 1599, 1936, 2377
Ecl136II	GAGCTC	1 cut(s)	2094
Eco130I	CCWWGG	3 cut(s)	164, 1840, 2444
Eco24I	GRGCYC	1 cut(s)	2096
Eco47I	GGWCC	3 cut(s)	517, 599, 2780
Eco53kI	GAGCTC	1 cut(s)	2094
Eco57I	CTGAAG	5 cut(s)	335, 561, 1005, 2046, 2558
Eco81I	CCTNAGG	1 cut(s)	629
EcoICRI	GAGCTC	1 cut(s)	2094
EcoO109I	RGGNCCY	1 cut(s)	1845
EcoRII	CCWGG	1 cut(s)	646
EcoT14I	CCWWGG	3 cut(s)	164, 1840, 2444
EcoT22I	ATGCAT	1 cut(s)	297
EcoT38I	GRGCYC	1 cut(s)	2096
ErhI	CCWWGG	3 cut(s)	164, 1840, 2444
Esp3I	CGTCTC	1 cut(s)	1067
FaeI	CATG	6 cut(s)	230, 1457, 1463, 1657, 2468, 2667
FalI	AAGNNNNNCTT	2 cut(s)	2203, 2235
FaqI	GGGAC	6 cut(s)	93, 881, 958, 1538, 1915, 2738
FatI	CATG	6 cut(s)	226, 1453, 1459, 1653, 2464, 2663
FauNDI	CATATG	1 cut(s)	367
FbaI	TGATCA	1 cut(s)	253
FblI	GTMKAC	5 cut(s)	1082, 2034, 2229, 2412, 2707
Fnu4HI	GCNGC	7 cut(s)	138, 428, 752, 1171, 1749, 2593, 2832
FokI	GGATG	7 cut(s)	556, 1275, 1300, 1525, 2180, 2309, 2406
FriOI	GRGCYC	1 cut(s)	2096
Fsp4HI	GCNGC	7 cut(s)	138, 428, 752, 1171, 1749, 2593, 2832
FspAI	RTGCGCAY	1 cut(s)	5
FspI	TGCGCA	2 cut(s)	5, 1421
GlaI	GCGC	2 cut(s)	5, 1421
GluI	GCNGC	7 cut(s)	138, 428, 752, 1171, 1749, 2593, 2832
GsuI	CTGGAG	2 cut(s)	819, 992
HaeIII	GGCC	5 cut(s)	28, 754, 1140, 1847, 1860
HapII	CCGG	5 cut(s)	1620, 1989, 2178, 2459, 2571
HhaI	GCGC	2 cut(s)	6, 1422
Hin1II	CATG	6 cut(s)	230, 1457, 1463, 1657, 2468, 2667
Hin6I	GCGC	2 cut(s)	4, 1420
HinP1I	GCGC	2 cut(s)	4, 1420
HincII	GTYRAC	1 cut(s)	2230
HindII	GTYRAC	1 cut(s)	2230
HindIII	AAGCTT	2 cut(s)	34, 2540
HpaII	CCGG	5 cut(s)	1620, 1989, 2178, 2459, 2571
HphI	GGTGA	4 cut(s)	242, 1013, 1844, 2783
Hpy99I	CGWCG	1 cut(s)	1522
HpyAV	CCTTC	7 cut(s)	330, 466, 478, 517, 958, 2070, 2754
HpyCH4III	ACNGT	6 cut(s)	872, 1060, 1697, 1964, 2042, 2784
HpyCH4IV	ACGT	5 cut(s)	277, 880, 955, 1076, 1615
HpyF10VI	GCNNNNNNNGC	5 cut(s)	137, 748, 859, 1748, 2100
HpySE526I	ACGT	5 cut(s)	277, 880, 955, 1076, 1615
Hsp92II	CATG	6 cut(s)	230, 1457, 1463, 1657, 2468, 2667
HspAI	GCGC	2 cut(s)	4, 1420
Ksp22I	TGATCA	1 cut(s)	253
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	2 cut(s)	800, 2121
Lsp1109I	GCAGC	6 cut(s)	124, 439, 1157, 1760, 2604, 2818
LweI	GCATC	6 cut(s)	1393, 1478, 1547, 1824, 2141, 2158
MabI	ACCWGGT	1 cut(s)	646
MaeII	ACGT	5 cut(s)	277, 880, 955, 1076, 1615
MaeIII	GTNAC	2 cut(s)	653, 1729
MflI	RGATCY	6 cut(s)	979, 1096, 1715, 1918, 2548, 2738
MhlI	GDGCHC	3 cut(s)	1561, 2029, 2096
MlsI	TGGCCA	1 cut(s)	28
MluNI	TGGCCA	1 cut(s)	28
MmeI	TCCRAC	2 cut(s)	1188, 1334
Mox20I	TGGCCA	1 cut(s)	28
Mph1103I	ATGCAT	1 cut(s)	297
MroXI	GAANNNNTTC	2 cut(s)	968, 1798
MscI	TGGCCA	1 cut(s)	28
MslI	CAYNNNNRTG	2 cut(s)	1458, 2616
Msp20I	TGGCCA	1 cut(s)	28
MspA1I	CMGCKG	2 cut(s)	182, 430
MspI	CCGG	5 cut(s)	1620, 1989, 2178, 2459, 2571
MspR9I	CCNGG	3 cut(s)	648, 2460, 2572
Mva1269I	GAATGC	5 cut(s)	295, 571, 1146, 1192, 1918
MvaI	CCWGG	1 cut(s)	648
MwoI	GCNNNNNNNGC	5 cut(s)	137, 748, 859, 1748, 2100
NciI	CCSGG	2 cut(s)	2460, 2572
NdeI	CATATG	1 cut(s)	367
NlaIII	CATG	6 cut(s)	230, 1457, 1463, 1657, 2468, 2667
NlaIV	GGNNCC	6 cut(s)	802, 1560, 1699, 1846, 2026, 2333
NmeAIII	GCCGAG	1 cut(s)	1122
NmuCI	GTSAC	1 cut(s)	653
NsbI	TGCGCA	2 cut(s)	5, 1421
NsiI	ATGCAT	1 cut(s)	297
NspI	RCATGY	2 cut(s)	1463, 2667
NspV	TTCGAA	1 cut(s)	307
PaeI	GCATGC	2 cut(s)	1463, 2667
PciSI	GCTCTTC	1 cut(s)	1599
PctI	GAATGC	5 cut(s)	295, 571, 1146, 1192, 1918
PdmI	GAANNNNTTC	2 cut(s)	968, 1798
PflMI	CCANNNNNTGG	1 cut(s)	1726
PinAI	ACCGGT	1 cut(s)	2177
PkrI	GCNGC	7 cut(s)	139, 429, 753, 1172, 1750, 2594, 2833
Psp124BI	GAGCTC	1 cut(s)	2096
Psp6I	CCWGG	1 cut(s)	646
PspGI	CCWGG	1 cut(s)	646
PspN4I	GGNNCC	6 cut(s)	802, 1560, 1699, 1846, 2026, 2333
PspPI	GGNCC	4 cut(s)	517, 599, 1845, 2780
PstI	CTGCAG	2 cut(s)	1201, 1750
PstNI	CAGNNNCTG	2 cut(s)	608, 1412
PsuI	RGATCY	6 cut(s)	979, 1096, 1715, 1918, 2548, 2738
PvuII	CAGCTG	2 cut(s)	182, 430
RsaI	GTAC	7 cut(s)	538, 616, 958, 1117, 1217, 1614, 2452
RsaNI	GTAC	7 cut(s)	537, 615, 957, 1116, 1216, 1613, 2451
RseI	CAYNNNNRTG	2 cut(s)	1458, 2616
SacI	GAGCTC	1 cut(s)	2096
SalI	GTCGAC	1 cut(s)	2228
SapI	GCTCTTC	1 cut(s)	1599
SatI	GCNGC	7 cut(s)	138, 428, 752, 1171, 1749, 2593, 2832
Sau96I	GGNCC	4 cut(s)	517, 599, 1845, 2780
ScaI	AGTACT	1 cut(s)	616
ScrFI	CCNGG	3 cut(s)	648, 2460, 2572
SduI	GDGCHC	3 cut(s)	1561, 2029, 2096
SexAI	ACCWGGT	1 cut(s)	646
SfaNI	GCATC	6 cut(s)	1393, 1478, 1547, 1824, 2141, 2158
SfcI	CTRYAG	3 cut(s)	1197, 1746, 1983
SfuI	TTCGAA	1 cut(s)	307
SinI	GGWCC	3 cut(s)	517, 599, 2780
SmiMI	CAYNNNNRTG	2 cut(s)	1458, 2616
SmlI	CTYRAG	5 cut(s)	397, 1803, 2238, 2791, 2839
SmoI	CTYRAG	5 cut(s)	397, 1803, 2238, 2791, 2839
SphI	GCATGC	2 cut(s)	1463, 2667
SsiI	CCGC	6 cut(s)	534, 751, 1710, 2364, 2517, 2667
SstI	GAGCTC	1 cut(s)	2096
StyD4I	CCNGG	3 cut(s)	646, 2458, 2570
StyI	CCWWGG	3 cut(s)	164, 1840, 2444
TaaI	ACNGT	6 cut(s)	872, 1060, 1697, 1964, 2042, 2784
TaiI	ACGT	5 cut(s)	280, 883, 958, 1079, 1618
TaqI	TCGA	8 cut(s)	307, 482, 1222, 1476, 1959, 2075, 2229, 2522
TatI	WGTACW	3 cut(s)	614, 1115, 2450
TauI	GCSGC	1 cut(s)	754
TscAI	CASTG	5 cut(s)	355, 1108, 1206, 1942, 2289
TseFI	GTSAC	1 cut(s)	653
TseI	GCWGC	6 cut(s)	137, 427, 1170, 1748, 2592, 2831
Tsp45I	GTSAC	1 cut(s)	653
TspDTI	ATGAA	7 cut(s)	560, 754, 1052, 1113, 1670, 1688, 2867
TspGWI	ACGGA	1 cut(s)	1748
TspRI	CASTG	5 cut(s)	355, 1108, 1206, 1942, 2289
Van91I	CCANNNNNTGG	1 cut(s)	1726
VpaK11BI	GGWCC	3 cut(s)	517, 599, 2780
XapI	RAATTY	6 cut(s)	504, 1384, 2187, 2311, 2626, 2732
XbaI	TCTAGA	1 cut(s)	1631
XceI	RCATGY	2 cut(s)	1463, 2667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	119
XmiI	GTMKAC	5 cut(s)	1082, 2034, 2229, 2412, 2707
XmnI	GAANNNNTTC	2 cut(s)	968, 1798
ZrmI	AGTACT	1 cut(s)	616
Zsp2I	ATGCAT	1 cut(s)	297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.