transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47270 |
| fragaria_vesca | FvH4_1g26990 |
| malus_domestica | MD09G1285300.v1.1 MD17G1278000.v1.1 |
| prunus_persica | Prupe.3G008700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0487231 |
| rosa_laevigata | RLG00000023021 |
| rosa_multiflora | Rmu_ssc0000366.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00394990 |
| rosa_rugosa | Rorug03G0232400 |
| rosa_samantha | Rh3AG280400 Rh3BG316300 Rh3CG314400 Rh3DG311800 |
| rosa_wichuraiana | Rw3G024830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 138 |
| AclWI | GGATC | 1 cut(s) | 88 |
| AluBI | AGCT | 2 cut(s) | 119, 172 |
| AluI | AGCT | 2 cut(s) | 119, 172 |
| AlwI | GGATC | 1 cut(s) | 88 |
| AspLEI | GCGC | 1 cut(s) | 140 |
| BaeGI | GKGCMC | 1 cut(s) | 76 |
| BanII | GRGCYC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 3 cut(s) | 61, 133, 164 |
| BccI | CCATC | 1 cut(s) | 200 |
| BceAI | ACGGC | 1 cut(s) | 240 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BpiI | GAAGAC | 3 cut(s) | 61, 133, 164 |
| BsaBI | GATNNNNATC | 1 cut(s) | 92 |
| BsaJI | CCNNGG | 1 cut(s) | 101 |
| Bse8I | GATNNNNATC | 1 cut(s) | 92 |
| BseDI | CCNNGG | 1 cut(s) | 101 |
| BseJI | GATNNNNATC | 1 cut(s) | 92 |
| BseSI | GKGCMC | 1 cut(s) | 76 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| Bsp1286I | GDGCHC | 2 cut(s) | 67, 76 |
| Bsp143I | GATC | 2 cut(s) | 87, 93 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspHI | TCATGA | 1 cut(s) | 90 |
| BspPI | GGATC | 1 cut(s) | 88 |
| BssECI | CCNNGG | 1 cut(s) | 101 |
| BssMI | GATC | 2 cut(s) | 87, 93 |
| BssT1I | CCWWGG | 1 cut(s) | 101 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| Bst6I | CTCTTC | 1 cut(s) | 101 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstHHI | GCGC | 1 cut(s) | 140 |
| BstKTI | GATC | 2 cut(s) | 90, 96 |
| BstMBI | GATC | 2 cut(s) | 87, 93 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 71, 169 |
| BstSLI | GKGCMC | 1 cut(s) | 76 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BstV2I | GAAGAC | 3 cut(s) | 61, 133, 164 |
| CciI | TCATGA | 1 cut(s) | 90 |
| CfoI | GCGC | 1 cut(s) | 140 |
| CseI | GACGC | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 4 cut(s) | 65, 119, 172, 242 |
| CviKI_1 | RGCY | 4 cut(s) | 65, 119, 172, 242 |
| DpnI | GATC | 2 cut(s) | 89, 95 |
| DpnII | GATC | 2 cut(s) | 87, 93 |
| Eam1104I | CTCTTC | 1 cut(s) | 101 |
| EarI | CTCTTC | 1 cut(s) | 101 |
| Eco130I | CCWWGG | 1 cut(s) | 101 |
| Eco24I | GRGCYC | 1 cut(s) | 67 |
| EcoT14I | CCWWGG | 1 cut(s) | 101 |
| EcoT38I | GRGCYC | 1 cut(s) | 67 |
| ErhI | CCWWGG | 1 cut(s) | 101 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 3 cut(s) | 92, 234, 266 |
| FatI | CATG | 1 cut(s) | 90 |
| FriOI | GRGCYC | 1 cut(s) | 67 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GlaI | GCGC | 1 cut(s) | 139 |
| HgaI | GACGC | 1 cut(s) | 169 |
| HhaI | GCGC | 1 cut(s) | 140 |
| Hin1II | CATG | 1 cut(s) | 94 |
| Hin6I | GCGC | 1 cut(s) | 138 |
| HinP1I | GCGC | 1 cut(s) | 138 |
| HindIII | AAGCTT | 1 cut(s) | 117 |
| HinfI | GANTC | 2 cut(s) | 32, 210 |
| Hpy188I | TCNGA | 2 cut(s) | 98, 196 |
| Hpy188III | TCNNGA | 2 cut(s) | 91, 123 |
| HpyAV | CCTTC | 3 cut(s) | 11, 63, 191 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 1 cut(s) | 268 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 71, 169 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| HspAI | GCGC | 1 cut(s) | 138 |
| Kzo9I | GATC | 2 cut(s) | 87, 93 |
| LpnPI | CCDG | 1 cut(s) | 266 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeIII | GTNAC | 1 cut(s) | 7 |
| MalI | GATC | 2 cut(s) | 89, 95 |
| MboI | GATC | 2 cut(s) | 87, 93 |
| MboII | GAAGA | 6 cut(s) | 66, 94, 97, 118, 138, 169 |
| MhlI | GDGCHC | 2 cut(s) | 67, 76 |
| MluCI | AATT | 1 cut(s) | 36 |
| MlyI | GAGTC | 1 cut(s) | 204 |
| MmeI | TCCRAC | 1 cut(s) | 121 |
| MseI | TTAA | 1 cut(s) | 307 |
| MvnI | CGCG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 71, 169 |
| NdeII | GATC | 2 cut(s) | 87, 93 |
| NlaIII | CATG | 1 cut(s) | 94 |
| PagI | TCATGA | 1 cut(s) | 90 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PflFI | GACNNNGTC | 1 cut(s) | 132 |
| PleI | GAGTC | 1 cut(s) | 204 |
| PpsI | GAGTC | 1 cut(s) | 204 |
| PsyI | GACNNNGTC | 1 cut(s) | 132 |
| SaqAI | TTAA | 1 cut(s) | 307 |
| Sau3AI | GATC | 2 cut(s) | 87, 93 |
| SchI | GAGTC | 1 cut(s) | 204 |
| SduI | GDGCHC | 2 cut(s) | 67, 76 |
| SetI | ASST | 5 cut(s) | 121, 133, 174, 202, 285 |
| Sse9I | AATT | 1 cut(s) | 36 |
| SspMI | CTAG | 1 cut(s) | 123 |
| StyI | CCWWGG | 1 cut(s) | 101 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TaqI | TCGA | 1 cut(s) | 67 |
| TaqII | GACCGA | 1 cut(s) | 305 |
| TasI | AATT | 1 cut(s) | 36 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 307 |
| Tru9I | TTAA | 1 cut(s) | 307 |
| TspDTI | ATGAA | 1 cut(s) | 266 |
| Tth111I | GACNNNGTC | 1 cut(s) | 132 |
| XbaI | TCTAGA | 1 cut(s) | 122 |
| XspI | CTAG | 1 cut(s) | 123 |