transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47270 |
| fragaria_vesca | FvH4_1g26990 |
| malus_domestica | MD09G1285300.v1.1 MD17G1278000.v1.1 |
| prunus_persica | Prupe.3G008700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0487231 |
| rosa_laevigata | RLG00000023021 |
| rosa_multiflora | Rmu_ssc0000366.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00394990 |
| rosa_rugosa | Rorug03G0232400 |
| rosa_samantha | Rh3AG280400 Rh3BG316300 Rh3CG314400 Rh3DG311800 |
| rosa_wichuraiana | Rw3G024830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 247, 260 |
| AcuI | CTGAAG | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 262 |
| AgsI | TTSAA | 4 cut(s) | 43, 110, 166, 277 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 283, 315 |
| AluBI | AGCT | 1 cut(s) | 344 |
| AluI | AGCT | 1 cut(s) | 344 |
| Alw26I | GTCTC | 2 cut(s) | 274, 332 |
| AlwI | GGATC | 2 cut(s) | 247, 260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 413 |
| AspS9I | GGNCC | 1 cut(s) | 52 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 277 |
| AvaII | GGWCC | 1 cut(s) | 52 |
| BamHI | GGATCC | 1 cut(s) | 252 |
| BccI | CCATC | 2 cut(s) | 179, 385 |
| BcoDI | GTCTC | 2 cut(s) | 274, 332 |
| BfaI | CTAG | 1 cut(s) | 117 |
| Bme18I | GGWCC | 1 cut(s) | 52 |
| BmgT120I | GGNCC | 1 cut(s) | 52 |
| BmiI | GGNNCC | 1 cut(s) | 254 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 363, 395 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 262 |
| BseGI | GGATG | 1 cut(s) | 16 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 262 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 262 |
| BsmAI | GTCTC | 2 cut(s) | 274, 332 |
| Bsp143I | GATC | 1 cut(s) | 252 |
| BspCNI | CTCAG | 1 cut(s) | 92 |
| BspLI | GGNNCC | 1 cut(s) | 254 |
| BspPI | GGATC | 2 cut(s) | 247, 260 |
| BssMI | GATC | 1 cut(s) | 252 |
| Bst6I | CTCTTC | 3 cut(s) | 170, 200, 272 |
| BstDEI | CTNAG | 1 cut(s) | 79 |
| BstF5I | GGATG | 1 cut(s) | 16 |
| BstKTI | GATC | 1 cut(s) | 255 |
| BstMAI | GTCTC | 2 cut(s) | 274, 332 |
| BstMBI | GATC | 1 cut(s) | 252 |
| BstX2I | RGATCY | 1 cut(s) | 252 |
| BstYI | RGATCY | 1 cut(s) | 252 |
| BtsCI | GGATG | 1 cut(s) | 16 |
| CaiI | CAGNNNCTG | 1 cut(s) | 413 |
| Cfr13I | GGNCC | 1 cut(s) | 52 |
| CviAII | CATG | 2 cut(s) | 62, 382 |
| CviJI | RGCY | 3 cut(s) | 5, 219, 344 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 219, 344 |
| DdeI | CTNAG | 1 cut(s) | 79 |
| DpnI | GATC | 1 cut(s) | 254 |
| DpnII | GATC | 1 cut(s) | 252 |
| Eam1104I | CTCTTC | 3 cut(s) | 170, 200, 272 |
| EarI | CTCTTC | 3 cut(s) | 170, 200, 272 |
| Eco47I | GGWCC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 221 |
| FaeI | CATG | 2 cut(s) | 65, 385 |
| FaiI | YATR | 3 cut(s) | 50, 63, 383 |
| FatI | CATG | 2 cut(s) | 61, 381 |
| FokI | GGATG | 1 cut(s) | 3 |
| FspBI | CTAG | 1 cut(s) | 117 |
| Hin1II | CATG | 2 cut(s) | 65, 385 |
| HinfI | GANTC | 5 cut(s) | 196, 286, 299, 372, 410 |
| HphI | GGTGA | 2 cut(s) | 139, 277 |
| Hpy188I | TCNGA | 4 cut(s) | 82, 201, 257, 415 |
| HpyAV | CCTTC | 4 cut(s) | 37, 204, 231, 255 |
| HpyCH4V | TGCA | 2 cut(s) | 364, 385 |
| HpyF3I | CTNAG | 1 cut(s) | 79 |
| Hsp92II | CATG | 2 cut(s) | 65, 385 |
| Kzo9I | GATC | 1 cut(s) | 252 |
| LmnI | GCTCC | 1 cut(s) | 230 |
| LpnPI | CCDG | 1 cut(s) | 319 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeIII | GTNAC | 1 cut(s) | 373 |
| MalI | GATC | 1 cut(s) | 254 |
| MboI | GATC | 1 cut(s) | 252 |
| MboII | GAAGA | 7 cut(s) | 98, 178, 187, 214, 217, 270, 289 |
| MflI | RGATCY | 1 cut(s) | 252 |
| MluCI | AATT | 2 cut(s) | 37, 224 |
| MlyI | GAGTC | 1 cut(s) | 381 |
| MnlI | CCTC | 4 cut(s) | 32, 58, 117, 230 |
| MseI | TTAA | 2 cut(s) | 36, 396 |
| MslI | CAYNNNNRTG | 2 cut(s) | 380, 386 |
| MspA1I | CMGCKG | 1 cut(s) | 344 |
| NdeII | GATC | 1 cut(s) | 252 |
| NlaIII | CATG | 2 cut(s) | 65, 385 |
| NlaIV | GGNNCC | 1 cut(s) | 254 |
| NmuCI | GTSAC | 1 cut(s) | 373 |
| PfeI | GAWTC | 4 cut(s) | 196, 286, 299, 410 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| PspN4I | GGNNCC | 1 cut(s) | 254 |
| PspPI | GGNCC | 1 cut(s) | 52 |
| PstNI | CAGNNNCTG | 1 cut(s) | 413 |
| PsuI | RGATCY | 1 cut(s) | 252 |
| PvuII | CAGCTG | 1 cut(s) | 344 |
| RseI | CAYNNNNRTG | 2 cut(s) | 380, 386 |
| SaqAI | TTAA | 2 cut(s) | 36, 396 |
| Sau3AI | GATC | 1 cut(s) | 252 |
| Sau96I | GGNCC | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 381 |
| SetI | ASST | 2 cut(s) | 275, 346 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SinI | GGWCC | 1 cut(s) | 52 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 380, 386 |
| Sse9I | AATT | 2 cut(s) | 37, 224 |
| SspMI | CTAG | 1 cut(s) | 117 |
| TasI | AATT | 2 cut(s) | 37, 224 |
| TfiI | GAWTC | 4 cut(s) | 196, 286, 299, 410 |
| Tru1I | TTAA | 2 cut(s) | 36, 396 |
| Tru9I | TTAA | 2 cut(s) | 36, 396 |
| TseFI | GTSAC | 1 cut(s) | 373 |
| Tsp45I | GTSAC | 1 cut(s) | 373 |
| TspGWI | ACGGA | 1 cut(s) | 339 |
| VpaK11BI | GGWCC | 1 cut(s) | 52 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 316 |
| XspI | CTAG | 1 cut(s) | 117 |