indole-3-acetic acid-amido synthetase GH3.9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47750 |
| fragaria_vesca | FvH4_2g25330 FvH4_2g25330 FvH4_2g25330 |
| malus_domestica | MD03G1284700.v1.1 MD11G1304200.v1.1 |
| prunus_persica | Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 |
| pyrus_communis | pycom03g22560 |
| rosa_chinensis | RchiOBHm_Chr6g0293491 |
| rosa_laevigata | RLG00000011945 |
| rosa_multiflora | Rmu_sc0006269.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00174130 |
| rosa_rugosa | Rorug06G0235800 Rorug06G0235900 |
| rosa_samantha | Rh6AG348600 Rh6BG356100 Rh6CG362700 Rh6DG349700 |
| rosa_wichuraiana | Rw6G030320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1625 |
| AatII | GACGTC | 1 cut(s) | 1038 |
| Acc36I | ACCTGC | 1 cut(s) | 934 |
| AccII | CGCG | 2 cut(s) | 174, 1415 |
| AciI | CCGC | 8 cut(s) | 346, 721, 835, 1177, 1250, 1397, 1415, 1505 |
| AclI | AACGTT | 3 cut(s) | 1358, 1598, 1688 |
| AclWI | GGATC | 6 cut(s) | 59, 104, 521, 746, 1453, 1623 |
| AcoI | YGGCCR | 2 cut(s) | 256, 1174 |
| AcsI | RAATTY | 1 cut(s) | 427 |
| AcuI | CTGAAG | 3 cut(s) | 90, 351, 642 |
| AcyI | GRCGYC | 1 cut(s) | 1035 |
| AdeI | CACNNNGTG | 2 cut(s) | 631, 1444 |
| AfaI | GTAC | 8 cut(s) | 125, 137, 212, 389, 422, 593, 1217, 1403 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 628, 1747 |
| AflIII | ACRYGT | 3 cut(s) | 1059, 1419, 1708 |
| AgeI | ACCGGT | 1 cut(s) | 725 |
| AgsI | TTSAA | 5 cut(s) | 77, 535, 1244, 1693, 1702 |
| AhlI | ACTAGT | 1 cut(s) | 485 |
| AjiI | CACGTC | 1 cut(s) | 1422 |
| AjnI | CCWGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 944, 964, 976, 996 |
| AleI | CACNNNNGTG | 1 cut(s) | 27 |
| Alw21I | GWGCWC | 1 cut(s) | 1270 |
| Alw26I | GTCTC | 2 cut(s) | 737, 983 |
| AlwI | GGATC | 6 cut(s) | 59, 104, 521, 746, 1453, 1623 |
| Ama87I | CYCGRG | 2 cut(s) | 686, 1472 |
| AoxI | GGCC | 3 cut(s) | 256, 869, 1174 |
| ApeKI | GCWGC | 2 cut(s) | 65, 282 |
| ApoI | RAATTY | 1 cut(s) | 427 |
| AsiGI | ACCGGT | 1 cut(s) | 725 |
| AspLEI | GCGC | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 5 cut(s) | 46, 611, 643, 739, 1597 |
| AsuNHI | GCTAGC | 1 cut(s) | 809 |
| AvaI | CYCGRG | 2 cut(s) | 686, 1472 |
| AxyI | CCTNAGG | 1 cut(s) | 873 |
| BalI | TGGCCA | 1 cut(s) | 258 |
| BanII | GRGCYC | 1 cut(s) | 908 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1326, 1358 |
| BauI | CACGAG | 2 cut(s) | 1405, 1734 |
| BbsI | GAAGAC | 3 cut(s) | 243, 579, 720 |
| Bbv12I | GWGCWC | 1 cut(s) | 1270 |
| BbvI | GCAGC | 2 cut(s) | 52, 294 |
| BccI | CCATC | 4 cut(s) | 569, 1036, 1480, 1606 |
| BciT130I | CCWGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| BclI | TGATCA | 2 cut(s) | 19, 744 |
| BcoDI | GTCTC | 2 cut(s) | 737, 983 |
| BcuI | ACTAGT | 1 cut(s) | 485 |
| BfaI | CTAG | 4 cut(s) | 486, 605, 810, 1115 |
| BfmI | CTRYAG | 1 cut(s) | 1288 |
| BfuAI | ACCTGC | 1 cut(s) | 934 |
| BglII | AGATCT | 3 cut(s) | 334, 825, 1339 |
| BisI | GCNGC | 4 cut(s) | 66, 283, 346, 1177 |
| BlsI | GCNGC | 4 cut(s) | 67, 284, 347, 1178 |
| BmcAI | AGTACT | 1 cut(s) | 125 |
| Bme1390I | CCNGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| BmeT110I | CYCGRG | 2 cut(s) | 686, 1472 |
| BmgBI | CACGTC | 1 cut(s) | 1422 |
| BmiI | GGNNCC | 2 cut(s) | 1014, 1752 |
| BmrFI | CCNGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| BmsI | GCATC | 2 cut(s) | 624, 1320 |
| BmtI | GCTAGC | 1 cut(s) | 813 |
| BpiI | GAAGAC | 3 cut(s) | 243, 579, 720 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 465, 497 |
| BpmI | CTGGAG | 2 cut(s) | 182, 321 |
| BpuEI | CTTGAG | 3 cut(s) | 65, 148, 953 |
| Bsa29I | ATCGAT | 1 cut(s) | 1559 |
| BsaAI | YACGTR | 3 cut(s) | 92, 1444, 1711 |
| BsaBI | GATNNNNATC | 2 cut(s) | 204, 339 |
| BsaHI | GRCGYC | 1 cut(s) | 1035 |
| BsaJI | CCNNGG | 3 cut(s) | 946, 1462, 1630 |
| BsaWI | WCCGGW | 2 cut(s) | 725, 1278 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 436, 466, 993, 1023 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 628, 1747 |
| Bse118I | RCCGGY | 2 cut(s) | 608, 725 |
| Bse1I | ACTGG | 4 cut(s) | 259, 511, 546, 1194 |
| Bse21I | CCTNAGG | 1 cut(s) | 873 |
| Bse3DI | GCAATG | 2 cut(s) | 423, 777 |
| Bse8I | GATNNNNATC | 2 cut(s) | 204, 339 |
| BseBI | CCWGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| BseCI | ATCGAT | 1 cut(s) | 1559 |
| BseDI | CCNNGG | 3 cut(s) | 946, 1462, 1630 |
| BseGI | GGATG | 4 cut(s) | 10, 160, 561, 717 |
| BseJI | GATNNNNATC | 2 cut(s) | 204, 339 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 628, 1747 |
| BseMI | GCAATG | 2 cut(s) | 423, 777 |
| BseMII | CTCAG | 1 cut(s) | 978 |
| BseNI | ACTGG | 4 cut(s) | 259, 511, 546, 1194 |
| BseX3I | CGGCCG | 1 cut(s) | 1174 |
| BseXI | GCAGC | 2 cut(s) | 52, 294 |
| BsgI | GTGCAG | 3 cut(s) | 535, 912, 1561 |
| Bsh1236I | CGCG | 2 cut(s) | 174, 1415 |
| Bsh1285I | CGRYCG | 2 cut(s) | 839, 1177 |
| BshFI | GGCC | 3 cut(s) | 258, 871, 1176 |
| BshTI | ACCGGT | 1 cut(s) | 725 |
| BshVI | ATCGAT | 1 cut(s) | 1559 |
| BsiEI | CGRYCG | 2 cut(s) | 839, 1177 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1270 |
| BsiHKCI | CYCGRG | 2 cut(s) | 686, 1472 |
| BsiSI | CCGG | 3 cut(s) | 609, 726, 1279 |
| BslFI | GGGAC | 3 cut(s) | 304, 1111, 1118 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 628, 1747 |
| BsmAI | GTCTC | 2 cut(s) | 737, 983 |
| BsmFI | GGGAC | 3 cut(s) | 304, 1111, 1118 |
| BsmI | GAATGC | 1 cut(s) | 1388 |
| BsnI | GGCC | 3 cut(s) | 258, 871, 1176 |
| BsoBI | CYCGRG | 2 cut(s) | 686, 1472 |
| Bsp1286I | GDGCHC | 2 cut(s) | 908, 1270 |
| BspACI | CCGC | 8 cut(s) | 346, 721, 835, 1177, 1250, 1397, 1415, 1505 |
| BspANI | GGCC | 3 cut(s) | 258, 871, 1176 |
| BspCNI | CTCAG | 1 cut(s) | 979 |
| BspDI | ATCGAT | 1 cut(s) | 1559 |
| BspFNI | CGCG | 2 cut(s) | 174, 1415 |
| BspLI | GGNNCC | 2 cut(s) | 1014, 1752 |
| BspMAI | CTGCAG | 1 cut(s) | 1292 |
| BspMI | ACCTGC | 1 cut(s) | 934 |
| BspOI | GCTAGC | 1 cut(s) | 813 |
| BspPI | GGATC | 6 cut(s) | 59, 104, 521, 746, 1453, 1623 |
| BspQI | GCTCTTC | 1 cut(s) | 1509 |
| BsrDI | GCAATG | 2 cut(s) | 423, 777 |
| BsrFI | RCCGGY | 2 cut(s) | 608, 725 |
| BsrI | ACTGG | 4 cut(s) | 259, 511, 546, 1194 |
| BssAI | RCCGGY | 2 cut(s) | 608, 725 |
| BssECI | CCNNGG | 3 cut(s) | 946, 1462, 1630 |
| BssNI | GRCGYC | 1 cut(s) | 1035 |
| BssSI | CACGAG | 2 cut(s) | 1405, 1734 |
| BssT1I | CCWWGG | 2 cut(s) | 1462, 1630 |
| Bst2BI | CACGAG | 2 cut(s) | 1405, 1734 |
| Bst2UI | CCWGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| Bst4CI | ACNGT | 7 cut(s) | 29, 596, 623, 1220, 1275, 1539, 1682 |
| Bst6I | CTCTTC | 3 cut(s) | 816, 1485, 1509 |
| BstACI | GRCGYC | 1 cut(s) | 1035 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 653 |
| BstBAI | YACGTR | 3 cut(s) | 92, 1444, 1711 |
| BstC8I | GCNNGC | 2 cut(s) | 503, 811 |
| BstDEI | CTNAG | 5 cut(s) | 150, 873, 987, 1307, 1318 |
| BstF5I | GGATG | 4 cut(s) | 10, 160, 561, 717 |
| BstFNI | CGCG | 2 cut(s) | 174, 1415 |
| BstHHI | GCGC | 1 cut(s) | 176 |
| BstMAI | GTCTC | 2 cut(s) | 737, 983 |
| BstMCI | CGRYCG | 2 cut(s) | 839, 1177 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 585, 653, 1394 |
| BstNI | CCWGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| BstNSI | RCATGY | 2 cut(s) | 592, 1063 |
| BstSCI | CCNGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| BstSFI | CTRYAG | 1 cut(s) | 1288 |
| BstUI | CGCG | 2 cut(s) | 174, 1415 |
| BstV1I | GCAGC | 2 cut(s) | 52, 294 |
| BstV2I | GAAGAC | 3 cut(s) | 243, 579, 720 |
| BstX2I | RGATCY | 6 cut(s) | 96, 334, 825, 1339, 1458, 1615 |
| BstYI | RGATCY | 6 cut(s) | 96, 334, 825, 1339, 1458, 1615 |
| BstZI | CGGCCG | 1 cut(s) | 1174 |
| Bsu15I | ATCGAT | 1 cut(s) | 1559 |
| Bsu36I | CCTNAGG | 1 cut(s) | 873 |
| BsuRI | GGCC | 3 cut(s) | 258, 871, 1176 |
| BsuTUI | ATCGAT | 1 cut(s) | 1559 |
| BtrI | CACGTC | 1 cut(s) | 1422 |
| BtsCI | GGATG | 4 cut(s) | 10, 160, 561, 717 |
| BtsIMutI | CAGTG | 5 cut(s) | 34, 518, 1434, 1544, 1687 |
| BveI | ACCTGC | 1 cut(s) | 934 |
| Cac8I | GCNNGC | 2 cut(s) | 503, 811 |
| CfoI | GCGC | 1 cut(s) | 176 |
| Cfr10I | RCCGGY | 2 cut(s) | 608, 725 |
| ClaI | ATCGAT | 1 cut(s) | 1559 |
| Csp6I | GTAC | 8 cut(s) | 124, 136, 211, 388, 421, 592, 1216, 1402 |
| CspAI | ACCGGT | 1 cut(s) | 725 |
| CviAII | CATG | 5 cut(s) | 139, 589, 742, 1060, 1755 |
| CviQI | GTAC | 8 cut(s) | 124, 136, 211, 388, 421, 592, 1216, 1402 |
| DdeI | CTNAG | 5 cut(s) | 150, 873, 987, 1307, 1318 |
| DraI | TTTAAA | 1 cut(s) | 169 |
| DraIII | CACNNNGTG | 2 cut(s) | 631, 1444 |
| EaeI | YGGCCR | 2 cut(s) | 256, 1174 |
| EagI | CGGCCG | 1 cut(s) | 1174 |
| Eam1104I | CTCTTC | 3 cut(s) | 816, 1485, 1509 |
| EarI | CTCTTC | 3 cut(s) | 816, 1485, 1509 |
| EciI | GGCGGA | 1 cut(s) | 1412 |
| EclXI | CGGCCG | 1 cut(s) | 1174 |
| Eco130I | CCWWGG | 2 cut(s) | 1462, 1630 |
| Eco24I | GRGCYC | 1 cut(s) | 908 |
| Eco32I | GATATC | 1 cut(s) | 202 |
| Eco52I | CGGCCG | 1 cut(s) | 1174 |
| Eco57I | CTGAAG | 3 cut(s) | 90, 351, 642 |
| Eco81I | CCTNAGG | 1 cut(s) | 873 |
| Eco88I | CYCGRG | 2 cut(s) | 686, 1472 |
| EcoRII | CCWGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| EcoRV | GATATC | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 2 cut(s) | 1462, 1630 |
| EcoT38I | GRGCYC | 1 cut(s) | 908 |
| ErhI | CCWWGG | 2 cut(s) | 1462, 1630 |
| FaeI | CATG | 5 cut(s) | 142, 592, 745, 1063, 1758 |
| FaqI | GGGAC | 3 cut(s) | 304, 1111, 1118 |
| FatI | CATG | 5 cut(s) | 138, 588, 741, 1059, 1754 |
| FauI | CCCGC | 1 cut(s) | 1243 |
| FbaI | TGATCA | 2 cut(s) | 19, 744 |
| Fnu4HI | GCNGC | 4 cut(s) | 66, 283, 346, 1177 |
| FokI | GGATG | 4 cut(s) | 17, 167, 548, 704 |
| FriOI | GRGCYC | 1 cut(s) | 908 |
| Fsp4HI | GCNGC | 4 cut(s) | 66, 283, 346, 1177 |
| FspBI | CTAG | 4 cut(s) | 486, 605, 810, 1115 |
| GlaI | GCGC | 1 cut(s) | 175 |
| GluI | GCNGC | 4 cut(s) | 66, 283, 346, 1177 |
| GsuI | CTGGAG | 2 cut(s) | 182, 321 |
| HaeIII | GGCC | 3 cut(s) | 258, 871, 1176 |
| HapII | CCGG | 3 cut(s) | 609, 726, 1279 |
| HhaI | GCGC | 1 cut(s) | 176 |
| Hin1I | GRCGYC | 1 cut(s) | 1035 |
| Hin1II | CATG | 5 cut(s) | 142, 592, 745, 1063, 1758 |
| Hin6I | GCGC | 1 cut(s) | 174 |
| HinP1I | GCGC | 1 cut(s) | 174 |
| HincII | GTYRAC | 2 cut(s) | 1006, 1153 |
| HindII | GTYRAC | 2 cut(s) | 1006, 1153 |
| HindIII | AAGCTT | 2 cut(s) | 14, 1373 |
| HinfI | GANTC | 8 cut(s) | 239, 616, 700, 796, 853, 955, 1002, 1227 |
| HpaII | CCGG | 3 cut(s) | 609, 726, 1279 |
| HphI | GGTGA | 5 cut(s) | 46, 611, 643, 739, 1597 |
| Hpy166II | GTNNAC | 5 cut(s) | 382, 464, 1006, 1153, 1404 |
| Hpy188I | TCNGA | 7 cut(s) | 219, 473, 615, 988, 1033, 1580, 1620 |
| Hpy8I | GTNNAC | 5 cut(s) | 382, 464, 1006, 1153, 1404 |
| Hpy99I | CGWCG | 4 cut(s) | 844, 1040, 1124, 1238 |
| HpyCH4III | ACNGT | 7 cut(s) | 29, 596, 623, 1220, 1275, 1539, 1682 |
| HpyCH4V | TGCA | 7 cut(s) | 282, 516, 674, 929, 1290, 1542, 1685 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 585, 653, 1394 |
| HpyF3I | CTNAG | 5 cut(s) | 150, 873, 987, 1307, 1318 |
| Hsp92I | GRCGYC | 1 cut(s) | 1035 |
| Hsp92II | CATG | 5 cut(s) | 142, 592, 745, 1063, 1758 |
| HspAI | GCGC | 1 cut(s) | 174 |
| Ksp22I | TGATCA | 2 cut(s) | 19, 744 |
| LguI | GCTCTTC | 1 cut(s) | 1509 |
| LmnI | GCTCC | 3 cut(s) | 644, 1265, 1350 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 294 |
| LweI | GCATC | 2 cut(s) | 624, 1320 |
| MaeI | CTAG | 4 cut(s) | 486, 605, 810, 1115 |
| MaeIII | GTNAC | 8 cut(s) | 488, 600, 623, 898, 1195, 1220, 1436, 1736 |
| MflI | RGATCY | 6 cut(s) | 96, 334, 825, 1339, 1458, 1615 |
| MhlI | GDGCHC | 2 cut(s) | 908, 1270 |
| MlsI | TGGCCA | 1 cut(s) | 258 |
| MluCI | AATT | 2 cut(s) | 222, 427 |
| MluNI | TGGCCA | 1 cut(s) | 258 |
| MlyI | GAGTC | 3 cut(s) | 233, 709, 1011 |
| MmeI | TCCRAC | 1 cut(s) | 1701 |
| MnlI | CCTC | 8 cut(s) | 42, 67, 491, 994, 1092, 1504, 1628, 1743 |
| Mox20I | TGGCCA | 1 cut(s) | 258 |
| MscI | TGGCCA | 1 cut(s) | 258 |
| MseI | TTAA | 5 cut(s) | 35, 168, 542, 785, 1644 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| Msp20I | TGGCCA | 1 cut(s) | 258 |
| MspI | CCGG | 3 cut(s) | 609, 726, 1279 |
| MspR9I | CCNGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| MssI | GTTTAAAC | 1 cut(s) | 169 |
| Mva1269I | GAATGC | 1 cut(s) | 1388 |
| MvaI | CCWGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| MvnI | CGCG | 2 cut(s) | 174, 1415 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 585, 653, 1394 |
| NheI | GCTAGC | 1 cut(s) | 809 |
| NlaIII | CATG | 5 cut(s) | 142, 592, 745, 1063, 1758 |
| NlaIV | GGNNCC | 2 cut(s) | 1014, 1752 |
| NmeAIII | GCCGAG | 3 cut(s) | 1065, 1152, 1686 |
| NmuCI | GTSAC | 5 cut(s) | 623, 898, 1195, 1436, 1736 |
| NspI | RCATGY | 2 cut(s) | 592, 1063 |
| OliI | CACNNNNGTG | 1 cut(s) | 27 |
| PaeR7I | CTCGAG | 2 cut(s) | 686, 1472 |
| PciI | ACATGT | 1 cut(s) | 1059 |
| PciSI | GCTCTTC | 1 cut(s) | 1509 |
| PctI | GAATGC | 1 cut(s) | 1388 |
| PfeI | GAWTC | 5 cut(s) | 616, 796, 853, 955, 1227 |
| PflFI | GACNNNGTC | 1 cut(s) | 1157 |
| PinAI | ACCGGT | 1 cut(s) | 725 |
| PkrI | GCNGC | 4 cut(s) | 67, 284, 347, 1178 |
| PleI | GAGTC | 3 cut(s) | 233, 708, 1010 |
| PmeI | GTTTAAAC | 1 cut(s) | 169 |
| PpsI | GAGTC | 3 cut(s) | 233, 708, 1010 |
| Ppu21I | YACGTR | 3 cut(s) | 92, 1444, 1711 |
| PscI | ACATGT | 1 cut(s) | 1059 |
| PsiI | TTATAA | 1 cut(s) | 1625 |
| Psp1406I | AACGTT | 3 cut(s) | 1358, 1598, 1688 |
| Psp6I | CCWGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| PspGI | CCWGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| PspN4I | GGNNCC | 2 cut(s) | 1014, 1752 |
| PstI | CTGCAG | 1 cut(s) | 1292 |
| PsuI | RGATCY | 6 cut(s) | 96, 334, 825, 1339, 1458, 1615 |
| PsyI | GACNNNGTC | 1 cut(s) | 1157 |
| RsaI | GTAC | 8 cut(s) | 125, 137, 212, 389, 422, 593, 1217, 1403 |
| RsaNI | GTAC | 8 cut(s) | 124, 136, 211, 388, 421, 592, 1216, 1402 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SapI | GCTCTTC | 1 cut(s) | 1509 |
| SaqAI | TTAA | 5 cut(s) | 35, 168, 542, 785, 1644 |
| SatI | GCNGC | 4 cut(s) | 66, 283, 346, 1177 |
| ScaI | AGTACT | 1 cut(s) | 125 |
| SchI | GAGTC | 3 cut(s) | 233, 709, 1011 |
| ScrFI | CCNGG | 5 cut(s) | 756, 947, 1394, 1434, 1593 |
| SduI | GDGCHC | 2 cut(s) | 908, 1270 |
| SfaNI | GCATC | 2 cut(s) | 624, 1320 |
| SfcI | CTRYAG | 1 cut(s) | 1288 |
| Sfr274I | CTCGAG | 2 cut(s) | 686, 1472 |
| SlaI | CTCGAG | 2 cut(s) | 686, 1472 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| SmlI | CTYRAG | 5 cut(s) | 44, 127, 686, 932, 1472 |
| SmoI | CTYRAG | 5 cut(s) | 44, 127, 686, 932, 1472 |
| SpeI | ACTAGT | 1 cut(s) | 485 |
| Sse9I | AATT | 2 cut(s) | 222, 427 |
| SsiI | CCGC | 8 cut(s) | 346, 721, 835, 1177, 1250, 1397, 1415, 1505 |
| SspI | AATATT | 1 cut(s) | 276 |
| SspMI | CTAG | 4 cut(s) | 486, 605, 810, 1115 |
| StyD4I | CCNGG | 5 cut(s) | 754, 945, 1392, 1432, 1591 |
| StyI | CCWWGG | 2 cut(s) | 1462, 1630 |
| TaaI | ACNGT | 7 cut(s) | 29, 596, 623, 1220, 1275, 1539, 1682 |
| TaqI | TCGA | 9 cut(s) | 59, 687, 819, 888, 1071, 1314, 1473, 1559, 1602 |
| TasI | AATT | 2 cut(s) | 222, 427 |
| TatI | WGTACW | 5 cut(s) | 123, 135, 387, 591, 1401 |
| TauI | GCSGC | 2 cut(s) | 348, 1179 |
| TfiI | GAWTC | 5 cut(s) | 616, 796, 853, 955, 1227 |
| Tru1I | TTAA | 5 cut(s) | 35, 168, 542, 785, 1644 |
| Tru9I | TTAA | 5 cut(s) | 35, 168, 542, 785, 1644 |
| TscAI | CASTG | 5 cut(s) | 34, 518, 1434, 1544, 1687 |
| TseFI | GTSAC | 5 cut(s) | 623, 898, 1195, 1436, 1736 |
| TseI | GCWGC | 2 cut(s) | 65, 282 |
| Tsp45I | GTSAC | 5 cut(s) | 623, 898, 1195, 1436, 1736 |
| TspDTI | ATGAA | 5 cut(s) | 26, 155, 874, 1140, 1200 |
| TspGWI | ACGGA | 4 cut(s) | 198, 659, 1278, 1719 |
| TspRI | CASTG | 5 cut(s) | 34, 518, 1434, 1544, 1687 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1157 |
| XapI | RAATTY | 1 cut(s) | 427 |
| XbaI | TCTAGA | 1 cut(s) | 1114 |
| XceI | RCATGY | 2 cut(s) | 592, 1063 |
| XhoI | CTCGAG | 2 cut(s) | 686, 1472 |
| XspI | CTAG | 4 cut(s) | 486, 605, 810, 1115 |
| ZraI | GACGTC | 1 cut(s) | 1036 |
| ZrmI | AGTACT | 1 cut(s) | 125 |