Indole-3-acetic acid-amido synthetase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47750 |
| fragaria_vesca | FvH4_2g25330 FvH4_2g25330 FvH4_2g25330 |
| malus_domestica | MD03G1284700.v1.1 MD11G1304200.v1.1 |
| prunus_persica | Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 |
| pyrus_communis | pycom03g22560 |
| rosa_chinensis | RchiOBHm_Chr6g0293491 |
| rosa_laevigata | RLG00000011945 |
| rosa_multiflora | Rmu_sc0006269.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00174130 |
| rosa_rugosa | Rorug06G0235800 Rorug06G0235900 |
| rosa_samantha | Rh6AG348600 Rh6BG356100 Rh6CG362700 Rh6DG349700 |
| rosa_wichuraiana | Rw6G030320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1224 |
| AccB1I | GGYRCC | 2 cut(s) | 650, 1575 |
| AccI | GTMKAC | 1 cut(s) | 1438 |
| AccII | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| AciI | CCGC | 7 cut(s) | 465, 628, 666, 1035, 1424, 1579, 1604 |
| AclWI | GGATC | 5 cut(s) | 160, 354, 527, 713, 1489 |
| AcoI | YGGCCR | 4 cut(s) | 262, 733, 1444, 1663 |
| AcsI | RAATTY | 4 cut(s) | 115, 831, 858, 1079 |
| AcuI | CTGAAG | 1 cut(s) | 285 |
| AcvI | CACGTG | 1 cut(s) | 1687 |
| AcyI | GRCGYC | 1 cut(s) | 651 |
| AfaI | GTAC | 5 cut(s) | 23, 730, 890, 944, 1412 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 406, 1067 |
| AflIII | ACRYGT | 3 cut(s) | 1041, 1641, 1686 |
| AgsI | TTSAA | 5 cut(s) | 43, 97, 517, 541, 1018 |
| AjiI | CACGTC | 2 cut(s) | 1042, 1436 |
| AjnI | CCWGG | 2 cut(s) | 400, 1627 |
| AluBI | AGCT | 5 cut(s) | 476, 495, 528, 871, 935 |
| AluI | AGCT | 5 cut(s) | 476, 495, 528, 871, 935 |
| Alw21I | GWGCWC | 1 cut(s) | 1248 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| AlwI | GGATC | 5 cut(s) | 160, 354, 527, 713, 1489 |
| AoxI | GGCC | 7 cut(s) | 204, 262, 733, 875, 1444, 1601, 1663 |
| ApeKI | GCWGC | 3 cut(s) | 507, 1182, 1533 |
| ApoI | RAATTY | 4 cut(s) | 115, 831, 858, 1079 |
| AspLEI | GCGC | 2 cut(s) | 653, 1583 |
| AspS9I | GGNCC | 1 cut(s) | 1601 |
| AsuC2I | CCSGG | 1 cut(s) | 1443 |
| AsuHPI | GGTGA | 3 cut(s) | 251, 1250, 1531 |
| AsuII | TTCGAA | 2 cut(s) | 119, 1077 |
| AxyI | CCTNAGG | 1 cut(s) | 641 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 712, 745 |
| BalI | TGGCCA | 1 cut(s) | 264 |
| BanI | GGYRCC | 2 cut(s) | 650, 1575 |
| BanII | GRGCYC | 2 cut(s) | 315, 682 |
| BbrPI | CACGTG | 1 cut(s) | 1687 |
| BbsI | GAAGAC | 1 cut(s) | 249 |
| Bbv12I | GWGCWC | 1 cut(s) | 1248 |
| BbvI | GCAGC | 3 cut(s) | 519, 1169, 1520 |
| BccI | CCATC | 4 cut(s) | 334, 853, 947, 1642 |
| BceAI | ACGGC | 3 cut(s) | 507, 638, 800 |
| BciT130I | CCWGG | 2 cut(s) | 402, 1629 |
| BciVI | GTATCC | 1 cut(s) | 1420 |
| BclI | TGATCA | 1 cut(s) | 750 |
| BcnI | CCSGG | 1 cut(s) | 1443 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| BfaI | CTAG | 5 cut(s) | 692, 807, 812, 938, 1416 |
| BfmI | CTRYAG | 3 cut(s) | 946, 1294, 1365 |
| BfoI | RGCGCY | 1 cut(s) | 654 |
| BfuI | GTATCC | 1 cut(s) | 1420 |
| BglII | AGATCT | 2 cut(s) | 102, 340 |
| BisI | GCNGC | 6 cut(s) | 466, 508, 1183, 1534, 1579, 1604 |
| BlsI | GCNGC | 6 cut(s) | 467, 509, 1184, 1535, 1580, 1605 |
| BmcAI | AGTACT | 1 cut(s) | 944 |
| Bme1390I | CCNGG | 3 cut(s) | 402, 1443, 1629 |
| BmgBI | CACGTC | 2 cut(s) | 1042, 1436 |
| BmgT120I | GGNCC | 1 cut(s) | 1601 |
| BmiI | GGNNCC | 4 cut(s) | 652, 783, 1577, 1626 |
| BmrFI | CCNGG | 3 cut(s) | 402, 1443, 1629 |
| BmsI | GCATC | 5 cut(s) | 312, 671, 1326, 1384, 1512 |
| BpiI | GAAGAC | 1 cut(s) | 249 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| Bpu14I | TTCGAA | 2 cut(s) | 119, 1077 |
| BpuEI | CTTGAG | 1 cut(s) | 1628 |
| BpuMI | CCSGG | 1 cut(s) | 1443 |
| Bsa29I | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| BsaAI | YACGTR | 2 cut(s) | 1453, 1687 |
| BsaBI | GATNNNNATC | 1 cut(s) | 345 |
| BsaHI | GRCGYC | 1 cut(s) | 651 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 400, 966, 1177, 1477, 1628, 1666 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1616, 1646 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 406, 1067 |
| Bse118I | RCCGGY | 3 cut(s) | 731, 768, 1572 |
| Bse1I | ACTGG | 6 cut(s) | 21, 265, 391, 411, 1200, 1261 |
| Bse21I | CCTNAGG | 1 cut(s) | 641 |
| Bse3DI | GCAATG | 4 cut(s) | 185, 583, 724, 1536 |
| Bse8I | GATNNNNATC | 1 cut(s) | 345 |
| BseBI | CCWGG | 2 cut(s) | 402, 1629 |
| BseCI | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| BseDI | CCNNGG | 7 cut(s) | 66, 400, 966, 1177, 1477, 1628, 1666 |
| BseGI | GGATG | 5 cut(s) | 10, 415, 662, 723, 927 |
| BseJI | GATNNNNATC | 1 cut(s) | 345 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 406, 1067 |
| BseMI | GCAATG | 4 cut(s) | 185, 583, 724, 1536 |
| BseMII | CTCAG | 4 cut(s) | 632, 1005, 1163, 1327 |
| BseNI | ACTGG | 6 cut(s) | 21, 265, 391, 411, 1200, 1261 |
| BseRI | GAGGAG | 3 cut(s) | 47, 1148, 1355 |
| BseXI | GCAGC | 3 cut(s) | 519, 1169, 1520 |
| BseYI | CCCAGC | 1 cut(s) | 931 |
| BsgI | GTGCAG | 1 cut(s) | 307 |
| Bsh1236I | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| Bsh1285I | CGRYCG | 2 cut(s) | 333, 1680 |
| BshFI | GGCC | 7 cut(s) | 206, 264, 735, 877, 1446, 1603, 1665 |
| BshNI | GGYRCC | 2 cut(s) | 650, 1575 |
| BshVI | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| BsiEI | CGRYCG | 2 cut(s) | 333, 1680 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1248 |
| BsiSI | CCGG | 4 cut(s) | 732, 769, 1443, 1573 |
| BslFI | GGGAC | 3 cut(s) | 383, 782, 1117 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 406, 1067 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BsmBI | CGTCTC | 1 cut(s) | 255 |
| BsmFI | GGGAC | 3 cut(s) | 383, 782, 1117 |
| BsmI | GAATGC | 2 cut(s) | 770, 1535 |
| BsnI | GGCC | 7 cut(s) | 206, 264, 735, 877, 1446, 1603, 1665 |
| Bsp119I | TTCGAA | 2 cut(s) | 119, 1077 |
| Bsp1286I | GDGCHC | 3 cut(s) | 315, 682, 1248 |
| Bsp19I | CCATGG | 1 cut(s) | 1477 |
| BspACI | CCGC | 7 cut(s) | 465, 628, 666, 1035, 1424, 1579, 1604 |
| BspANI | GGCC | 7 cut(s) | 206, 264, 735, 877, 1446, 1603, 1665 |
| BspCNI | CTCAG | 4 cut(s) | 633, 1004, 1164, 1326 |
| BspDI | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| BspFNI | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| BspHI | TCATGA | 1 cut(s) | 1113 |
| BspLI | GGNNCC | 4 cut(s) | 652, 783, 1577, 1626 |
| BspPI | GGATC | 5 cut(s) | 160, 354, 527, 713, 1489 |
| BspQI | GCTCTTC | 1 cut(s) | 1404 |
| BspT104I | TTCGAA | 2 cut(s) | 119, 1077 |
| BspT107I | GGYRCC | 2 cut(s) | 650, 1575 |
| BsrDI | GCAATG | 4 cut(s) | 185, 583, 724, 1536 |
| BsrFI | RCCGGY | 3 cut(s) | 731, 768, 1572 |
| BsrI | ACTGG | 6 cut(s) | 21, 265, 391, 411, 1200, 1261 |
| BssAI | RCCGGY | 3 cut(s) | 731, 768, 1572 |
| BssECI | CCNNGG | 7 cut(s) | 66, 400, 966, 1177, 1477, 1628, 1666 |
| BssNI | GRCGYC | 1 cut(s) | 651 |
| BssT1I | CCWWGG | 5 cut(s) | 66, 966, 1177, 1477, 1666 |
| Bst2UI | CCWGG | 2 cut(s) | 402, 1629 |
| Bst4CI | ACNGT | 3 cut(s) | 484, 1089, 1221 |
| Bst6I | CTCTTC | 3 cut(s) | 301, 1404, 1542 |
| BstACI | GRCGYC | 1 cut(s) | 651 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 600 |
| BstBAI | YACGTR | 2 cut(s) | 1453, 1687 |
| BstBI | TTCGAA | 2 cut(s) | 119, 1077 |
| BstC8I | GCNNGC | 1 cut(s) | 869 |
| BstDEI | CTNAG | 4 cut(s) | 641, 991, 1172, 1313 |
| BstDSI | CCRYGG | 1 cut(s) | 1477 |
| BstEII | GGTNACC | 1 cut(s) | 1201 |
| BstF5I | GGATG | 5 cut(s) | 10, 415, 662, 723, 927 |
| BstFNI | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| BstH2I | RGCGCY | 1 cut(s) | 654 |
| BstHHI | GCGC | 2 cut(s) | 653, 1583 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstMCI | CGRYCG | 2 cut(s) | 333, 1680 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 582, 591, 600, 659, 1005, 1182, 1578 |
| BstNI | CCWGG | 2 cut(s) | 402, 1629 |
| BstNSI | RCATGY | 1 cut(s) | 598 |
| BstPI | GGTNACC | 1 cut(s) | 1201 |
| BstSCI | CCNGG | 3 cut(s) | 400, 1441, 1627 |
| BstSFI | CTRYAG | 3 cut(s) | 946, 1294, 1365 |
| BstSNI | TACGTA | 1 cut(s) | 1453 |
| BstUI | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| BstV1I | GCAGC | 3 cut(s) | 519, 1169, 1520 |
| BstV2I | GAAGAC | 1 cut(s) | 249 |
| BstX2I | RGATCY | 2 cut(s) | 102, 340 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1256 |
| BstYI | RGATCY | 2 cut(s) | 102, 340 |
| Bsu15I | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| Bsu36I | CCTNAGG | 1 cut(s) | 641 |
| BsuI | GTATCC | 1 cut(s) | 1420 |
| BsuRI | GGCC | 7 cut(s) | 206, 264, 735, 877, 1446, 1603, 1665 |
| BsuTUI | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| BtgI | CCRYGG | 1 cut(s) | 1477 |
| BtrI | CACGTC | 2 cut(s) | 1042, 1436 |
| BtsCI | GGATG | 5 cut(s) | 10, 415, 662, 723, 927 |
| Cac8I | GCNNGC | 1 cut(s) | 869 |
| CciI | TCATGA | 1 cut(s) | 1113 |
| CfoI | GCGC | 2 cut(s) | 653, 1583 |
| Cfr10I | RCCGGY | 3 cut(s) | 731, 768, 1572 |
| Cfr13I | GGNCC | 1 cut(s) | 1601 |
| ClaI | ATCGAT | 3 cut(s) | 329, 1320, 1680 |
| CseI | GACGC | 1 cut(s) | 1649 |
| Csp6I | GTAC | 5 cut(s) | 22, 729, 889, 943, 1411 |
| CviAII | CATG | 5 cut(s) | 595, 849, 979, 1114, 1478 |
| CviQI | GTAC | 5 cut(s) | 22, 729, 889, 943, 1411 |
| DdeI | CTNAG | 4 cut(s) | 641, 991, 1172, 1313 |
| DinI | GGCGCC | 1 cut(s) | 652 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1224 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1224 |
| EaeI | YGGCCR | 4 cut(s) | 262, 733, 1444, 1663 |
| Eam1104I | CTCTTC | 3 cut(s) | 301, 1404, 1542 |
| EarI | CTCTTC | 3 cut(s) | 301, 1404, 1542 |
| EciI | GGCGGA | 1 cut(s) | 655 |
| Eco105I | TACGTA | 1 cut(s) | 1453 |
| Eco130I | CCWWGG | 5 cut(s) | 66, 966, 1177, 1477, 1666 |
| Eco24I | GRGCYC | 2 cut(s) | 315, 682 |
| Eco57I | CTGAAG | 1 cut(s) | 285 |
| Eco72I | CACGTG | 1 cut(s) | 1687 |
| Eco81I | CCTNAGG | 1 cut(s) | 641 |
| Eco91I | GGTNACC | 1 cut(s) | 1201 |
| EcoO65I | GGTNACC | 1 cut(s) | 1201 |
| EcoRI | GAATTC | 1 cut(s) | 1079 |
| EcoRII | CCWGG | 2 cut(s) | 400, 1627 |
| EcoT14I | CCWWGG | 5 cut(s) | 66, 966, 1177, 1477, 1666 |
| EcoT38I | GRGCYC | 2 cut(s) | 315, 682 |
| EgeI | GGCGCC | 1 cut(s) | 652 |
| EheI | GGCGCC | 1 cut(s) | 652 |
| ErhI | CCWWGG | 5 cut(s) | 66, 966, 1177, 1477, 1666 |
| Esp3I | CGTCTC | 1 cut(s) | 255 |
| FaeI | CATG | 5 cut(s) | 598, 852, 982, 1117, 1481 |
| FaqI | GGGAC | 3 cut(s) | 383, 782, 1117 |
| FatI | CATG | 5 cut(s) | 594, 848, 978, 1113, 1477 |
| FauI | CCCGC | 1 cut(s) | 1042 |
| FauNDI | CATATG | 1 cut(s) | 1585 |
| FbaI | TGATCA | 1 cut(s) | 750 |
| FblI | GTMKAC | 1 cut(s) | 1438 |
| Fnu4HI | GCNGC | 6 cut(s) | 466, 508, 1183, 1534, 1579, 1604 |
| FokI | GGATG | 5 cut(s) | 17, 422, 649, 710, 914 |
| FriOI | GRGCYC | 2 cut(s) | 315, 682 |
| Fsp4HI | GCNGC | 6 cut(s) | 466, 508, 1183, 1534, 1579, 1604 |
| FspBI | CTAG | 5 cut(s) | 692, 807, 812, 938, 1416 |
| GlaI | GCGC | 2 cut(s) | 652, 1582 |
| GluI | GCNGC | 6 cut(s) | 466, 508, 1183, 1534, 1579, 1604 |
| GsaI | CCCAGC | 1 cut(s) | 935 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HaeII | RGCGCY | 1 cut(s) | 654 |
| HaeIII | GGCC | 7 cut(s) | 206, 264, 735, 877, 1446, 1603, 1665 |
| HapII | CCGG | 4 cut(s) | 732, 769, 1443, 1573 |
| HgaI | GACGC | 1 cut(s) | 1649 |
| HhaI | GCGC | 2 cut(s) | 653, 1583 |
| Hin1I | GRCGYC | 1 cut(s) | 651 |
| Hin1II | CATG | 5 cut(s) | 598, 852, 982, 1117, 1481 |
| Hin6I | GCGC | 2 cut(s) | 651, 1581 |
| HinP1I | GCGC | 2 cut(s) | 651, 1581 |
| HincII | GTYRAC | 2 cut(s) | 456, 1012 |
| HindII | GTYRAC | 2 cut(s) | 456, 1012 |
| HinfI | GANTC | 5 cut(s) | 245, 1105, 1233, 1493, 1612 |
| HpaI | GTTAAC | 1 cut(s) | 1012 |
| HpaII | CCGG | 4 cut(s) | 732, 769, 1443, 1573 |
| HphI | GGTGA | 3 cut(s) | 251, 1250, 1531 |
| Hpy166II | GTNNAC | 7 cut(s) | 456, 625, 1012, 1050, 1413, 1439, 1492 |
| Hpy188I | TCNGA | 5 cut(s) | 169, 532, 677, 994, 1030 |
| Hpy188III | TCNNGA | 6 cut(s) | 294, 303, 344, 640, 938, 1114 |
| Hpy8I | GTNNAC | 7 cut(s) | 456, 625, 1012, 1050, 1413, 1439, 1492 |
| Hpy99I | CGWCG | 1 cut(s) | 1643 |
| HpyAV | CCTTC | 6 cut(s) | 37, 142, 436, 847, 851, 1399 |
| HpyCH4III | ACNGT | 3 cut(s) | 484, 1089, 1221 |
| HpyCH4IV | ACGT | 6 cut(s) | 452, 1041, 1430, 1435, 1452, 1686 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 582, 591, 600, 659, 1005, 1182, 1578 |
| HpyF3I | CTNAG | 4 cut(s) | 641, 991, 1172, 1313 |
| HpySE526I | ACGT | 6 cut(s) | 452, 1041, 1430, 1435, 1452, 1686 |
| Hsp92I | GRCGYC | 1 cut(s) | 651 |
| Hsp92II | CATG | 5 cut(s) | 598, 852, 982, 1117, 1481 |
| HspAI | GCGC | 2 cut(s) | 651, 1581 |
| KasI | GGCGCC | 1 cut(s) | 650 |
| Ksp22I | TGATCA | 1 cut(s) | 750 |
| KspAI | GTTAAC | 1 cut(s) | 1012 |
| LguI | GCTCTTC | 1 cut(s) | 1404 |
| LmnI | GCTCC | 3 cut(s) | 787, 1251, 1624 |
| Lsp1109I | GCAGC | 3 cut(s) | 519, 1169, 1520 |
| LweI | GCATC | 5 cut(s) | 312, 671, 1326, 1384, 1512 |
| MaeI | CTAG | 5 cut(s) | 692, 807, 812, 938, 1416 |
| MaeII | ACGT | 6 cut(s) | 452, 1041, 1430, 1435, 1452, 1686 |
| MaeIII | GTNAC | 4 cut(s) | 904, 1201, 1252, 1431 |
| MboII | GAAGA | 6 cut(s) | 22, 254, 318, 350, 1391, 1559 |
| MfeI | CAATTG | 1 cut(s) | 544 |
| MflI | RGATCY | 2 cut(s) | 102, 340 |
| MhlI | GDGCHC | 3 cut(s) | 315, 682, 1248 |
| MlsI | TGGCCA | 1 cut(s) | 264 |
| MluI | ACGCGT | 1 cut(s) | 1641 |
| MluNI | TGGCCA | 1 cut(s) | 264 |
| Mly113I | GGCGCC | 1 cut(s) | 651 |
| MlyI | GAGTC | 4 cut(s) | 239, 1099, 1242, 1487 |
| MmeI | TCCRAC | 1 cut(s) | 66 |
| Mox20I | TGGCCA | 1 cut(s) | 264 |
| MscI | TGGCCA | 1 cut(s) | 264 |
| MseI | TTAA | 4 cut(s) | 107, 174, 788, 1011 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1541 |
| Msp20I | TGGCCA | 1 cut(s) | 264 |
| MspA1I | CMGCKG | 1 cut(s) | 1037 |
| MspI | CCGG | 4 cut(s) | 732, 769, 1443, 1573 |
| MspR9I | CCNGG | 3 cut(s) | 402, 1443, 1629 |
| MunI | CAATTG | 1 cut(s) | 544 |
| Mva1269I | GAATGC | 2 cut(s) | 770, 1535 |
| MvaI | CCWGG | 2 cut(s) | 402, 1629 |
| MvnI | CGCG | 3 cut(s) | 1424, 1581, 1643 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 582, 591, 600, 659, 1005, 1182, 1578 |
| NarI | GGCGCC | 1 cut(s) | 651 |
| NciI | CCSGG | 1 cut(s) | 1443 |
| NcoI | CCATGG | 1 cut(s) | 1477 |
| NdeI | CATATG | 1 cut(s) | 1585 |
| NlaIII | CATG | 5 cut(s) | 598, 852, 982, 1117, 1481 |
| NlaIV | GGNNCC | 4 cut(s) | 652, 783, 1577, 1626 |
| NmeAIII | GCCGAG | 1 cut(s) | 1087 |
| NmuCI | GTSAC | 3 cut(s) | 904, 1252, 1431 |
| NspI | RCATGY | 1 cut(s) | 598 |
| NspV | TTCGAA | 2 cut(s) | 119, 1077 |
| PagI | TCATGA | 1 cut(s) | 1113 |
| PciSI | GCTCTTC | 1 cut(s) | 1404 |
| PctI | GAATGC | 2 cut(s) | 770, 1535 |
| PfeI | GAWTC | 1 cut(s) | 1612 |
| PkrI | GCNGC | 6 cut(s) | 467, 509, 1184, 1535, 1580, 1605 |
| Ple19I | CGATCG | 2 cut(s) | 333, 1680 |
| PleI | GAGTC | 4 cut(s) | 239, 1099, 1241, 1487 |
| PluTI | GGCGCC | 1 cut(s) | 654 |
| PmaCI | CACGTG | 1 cut(s) | 1687 |
| PmlI | CACGTG | 1 cut(s) | 1687 |
| PpsI | GAGTC | 4 cut(s) | 239, 1099, 1241, 1487 |
| Ppu21I | YACGTR | 2 cut(s) | 1453, 1687 |
| Psp6I | CCWGG | 2 cut(s) | 400, 1627 |
| PspCI | CACGTG | 1 cut(s) | 1687 |
| PspEI | GGTNACC | 1 cut(s) | 1201 |
| PspFI | CCCAGC | 1 cut(s) | 931 |
| PspGI | CCWGG | 2 cut(s) | 400, 1627 |
| PspN4I | GGNNCC | 4 cut(s) | 652, 783, 1577, 1626 |
| PspPI | GGNCC | 1 cut(s) | 1601 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 472, 504 |
| PsuI | RGATCY | 2 cut(s) | 102, 340 |
| PvuI | CGATCG | 2 cut(s) | 333, 1680 |
| RsaI | GTAC | 5 cut(s) | 23, 730, 890, 944, 1412 |
| RsaNI | GTAC | 5 cut(s) | 22, 729, 889, 943, 1411 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1541 |
| SapI | GCTCTTC | 1 cut(s) | 1404 |
| SaqAI | TTAA | 4 cut(s) | 107, 174, 788, 1011 |
| SatI | GCNGC | 6 cut(s) | 466, 508, 1183, 1534, 1579, 1604 |
| Sau96I | GGNCC | 1 cut(s) | 1601 |
| ScaI | AGTACT | 1 cut(s) | 944 |
| SchI | GAGTC | 4 cut(s) | 239, 1099, 1242, 1487 |
| ScrFI | CCNGG | 3 cut(s) | 402, 1443, 1629 |
| SduI | GDGCHC | 3 cut(s) | 315, 682, 1248 |
| SfaNI | GCATC | 5 cut(s) | 312, 671, 1326, 1384, 1512 |
| SfcI | CTRYAG | 3 cut(s) | 946, 1294, 1365 |
| SfoI | GGCGCC | 1 cut(s) | 652 |
| SfuI | TTCGAA | 2 cut(s) | 119, 1077 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1572 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1541 |
| SmlI | CTYRAG | 1 cut(s) | 1607 |
| SmoI | CTYRAG | 1 cut(s) | 1607 |
| SnaBI | TACGTA | 1 cut(s) | 1453 |
| SsiI | CCGC | 7 cut(s) | 465, 628, 666, 1035, 1424, 1579, 1604 |
| SspDI | GGCGCC | 1 cut(s) | 650 |
| SspI | AATATT | 1 cut(s) | 282 |
| SspMI | CTAG | 5 cut(s) | 692, 807, 812, 938, 1416 |
| StyD4I | CCNGG | 3 cut(s) | 400, 1441, 1627 |
| StyI | CCWWGG | 5 cut(s) | 66, 966, 1177, 1477, 1666 |
| TaaI | ACNGT | 3 cut(s) | 484, 1089, 1221 |
| TaiI | ACGT | 6 cut(s) | 455, 1044, 1433, 1438, 1455, 1689 |
| TatI | WGTACW | 4 cut(s) | 21, 888, 942, 1410 |
| TauI | GCSGC | 3 cut(s) | 468, 1581, 1606 |
| TfiI | GAWTC | 1 cut(s) | 1612 |
| Tru1I | TTAA | 4 cut(s) | 107, 174, 788, 1011 |
| Tru9I | TTAA | 4 cut(s) | 107, 174, 788, 1011 |
| TseFI | GTSAC | 3 cut(s) | 904, 1252, 1431 |
| TseI | GCWGC | 3 cut(s) | 507, 1182, 1533 |
| Tsp45I | GTSAC | 3 cut(s) | 904, 1252, 1431 |
| TspDTI | ATGAA | 8 cut(s) | 161, 401, 843, 1072, 1130, 1206, 1279, 1648 |
| TspGWI | ACGGA | 2 cut(s) | 716, 1585 |
| XapI | RAATTY | 4 cut(s) | 115, 831, 858, 1079 |
| XbaI | TCTAGA | 1 cut(s) | 937 |
| XceI | RCATGY | 1 cut(s) | 598 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 398, 611 |
| XmiI | GTMKAC | 1 cut(s) | 1438 |
| XspI | CTAG | 5 cut(s) | 692, 807, 812, 938, 1416 |
| ZrmI | AGTACT | 1 cut(s) | 944 |