FvH4_2g25330

Indole-3-acetic acid-amido synthetase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
20594678 .. 20597644
2967 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g25330.t2

Sequence Viewer

Length: 1842 bp
ATGGACGGGAAGAAGCTCGAGTACAAAGGTGAGGAGGCATTGAAGGAGATTGAGAGGCTCACTTCAAAGGCTGATAAAGTTCAGCTGAACATTTTGAAAGAGATCTTAACCAGAAATGTGGAGACTGAGTATCTGAGCAAGTACATGAAGGGATCACAAGAAGTTGCAGATTTTAAGAAGTGTGTTCCTGTCATTACTTACAAGGAGATCCAACCTTATATCCAAAGGATAGCTAATGGTGAAGACTCCTCTCTCATAACTGGTCACCCAATAACTGAAATGCTATGCAGCTCAGGAACTTCAGGAAGAGAGCCTAAGATGATGCCAACAATCGCTGAAGATCTCGACCGTCGAACCTTTATCTACAATCTCATTATGCCAATTATCAACCAGTATGTTCCTGATCTGGACAAGGGCAAGGCCATGTTCCTCTACTTTGTCAAGGCAGAGATGTCGACGCCGTGCGGCTTACCGGCACGGACAGTCCTCACCAGCTACTACAAGAGCAACCACTTCAAGTGCCGAGGCGAAGACCCTTTCAACAACTGTACTAGCCCTGACCAGACCGTTTTTTGCAACGACAGCAATCAAAGCATGTATTGCCAGCTCCTCTCTGGCCTACTCCACCGCCATCAAGTCCTGAGGCTCGGGGCCGTTTTCGCCTCAGCTTTTCTACGAGCCATTTCGTTCCTCGAACGAAACTGGGTCAATTTCTGCAATGACATACGAACCGGGAAGTTGGATCCCCTGATCACAGACCCTGATTGCCGCAAATCCATGGCTAAAATTCTCTCCTCACCTGATCCTGACCTGGCTGACGAGATCAGCAGCATTTGTAGCCTTCAATCCTGGAAGGGAATTCTGTGCCAGCTATGGCCTAAGGCTAAGTACATTGAAGCCGTTGTCACTGGATCCATGGCGCAGTACATACCGGCTTTGGAGTATTACAGTGATGGAAAGCTTCCATTAGTCGGCACCATGTATGCATCTTCAGAATGTTACTTTGGTGTGAACTTGAAGCCCTTCTGTGACCCTGCTGATGTGGCGTTCACCCTGATGCCCAATATGGGGTACTTTGAGTTTATACCATTGGGAAGAGGAGAGAATGGGACAAGCAGGGTGATGGACATTGAAGAGGATGAGGATGAGGATGTGCTTAGTGACAAGCTTGTGGACTTGGTGCATGTCAAGCTGGGCGGTTACTATGAATTGGTGGTAACAACCTTTGCTGGGTTATATCGTTATCGTATTGGTGATGTGCTACAAGTCACCGGATTTCACAATCAAGCCCCGCAATTCCGGTTCATATGTAGGAGGAATGTTGTTCTAAGCATCGACACTGACAAAACTAATGAAGAGGACTTGCATAGGAGCATTACCGTGGCCAAAAAGTTGTTAGAGCCTTTCAATGCTCTTCTTGTGGAGTACACGAGCTATGCCGATACGTCGCGCGTTCCAGGCCACTACGTAATGTATTGGGAGATCGTACACCACCATGGATCGCTGTCACCGTCACCAACGGTGGACTCCTTGATCAACAATGTAGTCACGCCACTAGATGATAAGGTGCTCCAAGAATGTTGCATCGCAGTGGAGGAGGAGCTTGATTACATATACCGTCGATGCCGCTCGCACGACAAGTCTGTAGGGCCGCTCGAGATACGTGTTGTGGAGCCTGGCACATTTGAGGCATTGATGGACTACTTCATCAACCAAGGGGGTTCCATCAATCAGTATAAGACGCCGAGGTGTATCAAGTCTAAGAAGGCTCTGAAGCTGCTTGATTCTAATGTTAAGGCTCGTTACTTTAGTCCGAGAGATCCTCATTGGAGTCCTAAATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

614

Amino Acids

69.65

Weight (kDa)

5.81

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GH3 PF03321 2 - 178 5.2e-63 GH3 family N-terminal domain
GH3_M PF23571 209 - 297 1e-29 GH3 family central domain
GH3_C PF23572 312 - 447 8.4e-36 GH3 family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 974
AccBSI CCGCTC 2 cut(s) 1629, 1654
AccI GTMKAC 1 cut(s) 455
AccII CGCG 2 cut(s) 1450, 1452
AciI CCGC 7 cut(s) 465, 628, 769, 1197, 1292, 1627, 1652
AclWI GGATC 9 cut(s) 160, 202, 737, 750, 797, 906, 919, 1507, 1814
AcoI YGGCCR 1 cut(s) 1383
AcsI RAATTY 2 cut(s) 786, 858
AcuI CTGAAG 4 cut(s) 285, 357, 975, 1793
AcyI GRCGYC 2 cut(s) 458, 1742
AfaI GTAC 8 cut(s) 23, 143, 550, 890, 926, 1073, 1427, 1488
AfiI CCNNNNNNNGG 4 cut(s) 971, 1067, 1068, 1230
AflIII ACRYGT 1 cut(s) 1663
AjnI CCWGG 4 cut(s) 810, 848, 1456, 1675
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
Alw21I GWGCWC 1 cut(s) 1572
Alw26I GTCTC 1 cut(s) 116
AlwI GGATC 9 cut(s) 160, 202, 737, 750, 797, 906, 919, 1507, 1814
AlwNI CAGNNNCTG 1 cut(s) 761
Ama87I CYCGRG 3 cut(s) 17, 647, 1655
AoxI GGCC 7 cut(s) 420, 616, 651, 875, 1383, 1459, 1649
ApeKI GCWGC 3 cut(s) 288, 828, 1777
ApoI RAATTY 2 cut(s) 786, 858
Asp700I GAANNNNTTC 1 cut(s) 1022
AspLEI GCGC 2 cut(s) 922, 1452
AspS9I GGNCC 2 cut(s) 651, 1649
AsuC2I CCSGG 1 cut(s) 733
AvaI CYCGRG 3 cut(s) 17, 647, 1655
AxyI CCTNAGG 2 cut(s) 641, 879
BalI TGGCCA 1 cut(s) 1385
BamHI GGATCC 2 cut(s) 742, 911
BanI GGYRCC 1 cut(s) 974
BarI GAAGNNNNNNTAC 1 cut(s) 37
BauI CACGAG 1 cut(s) 1429
BbsI GAAGAC 2 cut(s) 249, 537
Bbv12I GWGCWC 1 cut(s) 1572
BbvCI CCTCAGC 1 cut(s) 664
BbvI GCAGC 3 cut(s) 300, 840, 1764
BccI CCATC 5 cut(s) 639, 947, 1117, 1690, 1733
BceAI ACGGC 3 cut(s) 445, 638, 884
BcgI CGANNNNNNTGC 2 cut(s) 435, 469
BciT130I CCWGG 4 cut(s) 812, 850, 1458, 1677
BclI TGATCA 2 cut(s) 750, 1533
BcnI CCSGG 1 cut(s) 733
BcoDI GTCTC 1 cut(s) 116
BfaI CTAG 2 cut(s) 552, 1556
BfmI CTRYAG 1 cut(s) 1644
BglII AGATCT 2 cut(s) 102, 340
BisI GCNGC 7 cut(s) 289, 466, 769, 829, 1627, 1652, 1778
BlsI GCNGC 7 cut(s) 290, 467, 770, 830, 1628, 1653, 1779
Bme1390I CCNGG 5 cut(s) 733, 812, 850, 1458, 1677
BmeT110I CYCGRG 3 cut(s) 17, 647, 1655
BmgT120I GGNCC 2 cut(s) 651, 1649
BmiI GGNNCC 6 cut(s) 652, 744, 913, 976, 1674, 1723
BmrFI CCNGG 5 cut(s) 733, 812, 850, 1458, 1677
BmrI ACTGGG 1 cut(s) 712
BmsI GCATC 6 cut(s) 312, 995, 1047, 1341, 1593, 1613
BmuI ACTGGG 1 cut(s) 712
BpiI GAAGAC 2 cut(s) 249, 537
BplI GAGNNNNNCTC 2 cut(s) 1807, 1839
Bpu10I CCTNAGC 2 cut(s) 292, 664
BpuMI CCSGG 1 cut(s) 733
BsaAI YACGTR 2 cut(s) 1468, 1664
BsaHI GRCGYC 2 cut(s) 458, 1742
BsaJI CCNNGG 7 cut(s) 523, 777, 915, 1380, 1495, 1714, 1745
BsaWI WCCGGW 2 cut(s) 1271, 1299
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 4 cut(s) 971, 1067, 1068, 1230
Bse118I RCCGGY 2 cut(s) 472, 931
Bse1I ACTGG 4 cut(s) 265, 391, 707, 913
Bse21I CCTNAGG 2 cut(s) 641, 879
Bse3DI GCAATG 1 cut(s) 724
BseBI CCWGG 4 cut(s) 812, 850, 1458, 1677
BseDI CCNNGG 7 cut(s) 523, 777, 915, 1380, 1495, 1714, 1745
BseGI GGATG 3 cut(s) 1144, 1150, 1156
BseLI CCNNNNNNNGG 4 cut(s) 971, 1067, 1068, 1230
BseMI GCAATG 1 cut(s) 724
BseMII CTCAG 5 cut(s) 117, 125, 306, 632, 678
BseNI ACTGG 4 cut(s) 265, 391, 707, 913
BseRI GAGGAG 7 cut(s) 47, 238, 599, 784, 1113, 1610, 1613
BseXI GCAGC 3 cut(s) 300, 840, 1764
BseYI CCCAGC 2 cut(s) 1192, 1229
Bsh1236I CGCG 2 cut(s) 1450, 1452
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 7 cut(s) 422, 618, 653, 877, 1385, 1461, 1651
BshNI GGYRCC 1 cut(s) 974
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 1572
BsiHKCI CYCGRG 3 cut(s) 17, 647, 1655
BsiSI CCGG 5 cut(s) 473, 732, 932, 1272, 1300
BslFI GGGAC 1 cut(s) 1123
BslI CCNNNNNNNGG 4 cut(s) 971, 1067, 1068, 1230
BsmAI GTCTC 1 cut(s) 116
BsmFI GGGAC 1 cut(s) 1123
BsnI GGCC 7 cut(s) 422, 618, 653, 877, 1385, 1461, 1651
BsoBI CYCGRG 3 cut(s) 17, 647, 1655
Bsp1286I GDGCHC 1 cut(s) 1572
Bsp19I CCATGG 3 cut(s) 777, 915, 1495
BspACI CCGC 7 cut(s) 465, 628, 769, 1197, 1292, 1627, 1652
BspANI GGCC 7 cut(s) 422, 618, 653, 877, 1385, 1461, 1651
BspCNI CTCAG 5 cut(s) 118, 126, 305, 633, 677
BspFNI CGCG 2 cut(s) 1450, 1452
BspLI GGNNCC 6 cut(s) 652, 744, 913, 976, 1674, 1723
BspPI GGATC 9 cut(s) 160, 202, 737, 750, 797, 906, 919, 1507, 1814
BspQI GCTCTTC 1 cut(s) 1419
BspT107I GGYRCC 1 cut(s) 974
BsrBI CCGCTC 2 cut(s) 1629, 1654
BsrDI GCAATG 1 cut(s) 724
BsrFI RCCGGY 2 cut(s) 472, 931
BsrI ACTGG 4 cut(s) 265, 391, 707, 913
BssAI RCCGGY 2 cut(s) 472, 931
BssECI CCNNGG 7 cut(s) 523, 777, 915, 1380, 1495, 1714, 1745
BssNI GRCGYC 2 cut(s) 458, 1742
BssSI CACGAG 1 cut(s) 1429
BssT1I CCWWGG 4 cut(s) 777, 915, 1495, 1714
Bst2BI CACGAG 1 cut(s) 1429
Bst2UI CCWGG 4 cut(s) 812, 850, 1458, 1677
Bst4CI ACNGT 9 cut(s) 350, 484, 548, 568, 950, 1381, 1512, 1522, 1619
Bst6I CTCTTC 5 cut(s) 301, 1090, 1128, 1350, 1419
BstACI GRCGYC 2 cut(s) 458, 1742
BstAPI GCANNNNNTGC 1 cut(s) 600
BstBAI YACGTR 2 cut(s) 1468, 1664
BstC8I GCNNGC 3 cut(s) 605, 869, 1631
BstDSI CCRYGG 4 cut(s) 777, 915, 1380, 1495
BstEII GGTNACC 1 cut(s) 263
BstF5I GGATG 3 cut(s) 1144, 1150, 1156
BstFNI CGCG 2 cut(s) 1450, 1452
BstHHI GCGC 2 cut(s) 922, 1452
BstMAI GTCTC 1 cut(s) 116
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 8 cut(s) 582, 591, 600, 659, 837, 1043, 1189, 1458
BstNI CCWGG 4 cut(s) 812, 850, 1458, 1677
BstNSI RCATGY 2 cut(s) 598, 1187
BstPI GGTNACC 1 cut(s) 263
BstSCI CCNGG 5 cut(s) 731, 810, 848, 1456, 1675
BstSFI CTRYAG 1 cut(s) 1644
BstSNI TACGTA 1 cut(s) 1468
BstUI CGCG 2 cut(s) 1450, 1452
BstV1I GCAGC 3 cut(s) 300, 840, 1764
BstV2I GAAGAC 2 cut(s) 249, 537
BstX2I RGATCY 6 cut(s) 102, 207, 340, 742, 911, 1819
BstXI CCANNNNNNTGG 1 cut(s) 118
BstYI RGATCY 6 cut(s) 102, 207, 340, 742, 911, 1819
Bsu36I CCTNAGG 2 cut(s) 641, 879
BsuRI GGCC 7 cut(s) 422, 618, 653, 877, 1385, 1461, 1651
BtgI CCRYGG 4 cut(s) 777, 915, 1380, 1495
BtgZI GCGATG 1 cut(s) 1570
BtsCI GGATG 3 cut(s) 1144, 1150, 1156
BtsI GCAGTG 1 cut(s) 1596
BtsIMutI CAGTG 4 cut(s) 906, 955, 1338, 1596
Cac8I GCNNGC 3 cut(s) 605, 869, 1631
CaiI CAGNNNCTG 1 cut(s) 761
CfoI GCGC 2 cut(s) 922, 1452
Cfr10I RCCGGY 2 cut(s) 472, 931
Cfr13I GGNCC 2 cut(s) 651, 1649
CseI GACGC 2 cut(s) 466, 1750
Csp6I GTAC 8 cut(s) 22, 142, 549, 889, 925, 1072, 1426, 1487
CviAII CATG 8 cut(s) 145, 424, 595, 778, 916, 979, 1184, 1496
CviQI GTAC 8 cut(s) 22, 142, 549, 889, 925, 1072, 1426, 1487
EaeI YGGCCR 1 cut(s) 1383
Eam1104I CTCTTC 5 cut(s) 301, 1090, 1128, 1350, 1419
EarI CTCTTC 5 cut(s) 301, 1090, 1128, 1350, 1419
Eco105I TACGTA 1 cut(s) 1468
Eco130I CCWWGG 4 cut(s) 777, 915, 1495, 1714
Eco57I CTGAAG 4 cut(s) 285, 357, 975, 1793
Eco81I CCTNAGG 2 cut(s) 641, 879
Eco88I CYCGRG 3 cut(s) 17, 647, 1655
Eco91I GGTNACC 1 cut(s) 263
EcoO65I GGTNACC 1 cut(s) 263
EcoRI GAATTC 1 cut(s) 858
EcoRII CCWGG 4 cut(s) 810, 848, 1456, 1675
EcoT14I CCWWGG 4 cut(s) 777, 915, 1495, 1714
EcoT22I ATGCAT 1 cut(s) 988
ErhI CCWWGG 4 cut(s) 777, 915, 1495, 1714
FaeI CATG 8 cut(s) 148, 427, 598, 781, 919, 982, 1187, 1499
FaqI GGGAC 1 cut(s) 1123
FatI CATG 8 cut(s) 144, 423, 594, 777, 915, 978, 1183, 1495
FauI CCCGC 1 cut(s) 1299
FauNDI CATATG 1 cut(s) 1307
FbaI TGATCA 2 cut(s) 750, 1533
FblI GTMKAC 1 cut(s) 455
Fnu4HI GCNGC 7 cut(s) 289, 466, 769, 829, 1627, 1652, 1778
FokI GGATG 3 cut(s) 1151, 1157, 1163
Fsp4HI GCNGC 7 cut(s) 289, 466, 769, 829, 1627, 1652, 1778
FspBI CTAG 2 cut(s) 552, 1556
GlaI GCGC 2 cut(s) 921, 1451
GluI GCNGC 7 cut(s) 289, 466, 769, 829, 1627, 1652, 1778
GsaI CCCAGC 2 cut(s) 1196, 1233
HaeIII GGCC 7 cut(s) 422, 618, 653, 877, 1385, 1461, 1651
HapII CCGG 5 cut(s) 473, 732, 932, 1272, 1300
HgaI GACGC 2 cut(s) 466, 1750
HhaI GCGC 2 cut(s) 922, 1452
Hin1I GRCGYC 2 cut(s) 458, 1742
Hin1II CATG 8 cut(s) 148, 427, 598, 781, 919, 982, 1187, 1499
Hin6I GCGC 2 cut(s) 920, 1450
HinP1I GCGC 2 cut(s) 920, 1450
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HindIII AAGCTT 2 cut(s) 959, 1166
HinfI GANTC 4 cut(s) 245, 1526, 1784, 1831
HpaII CCGG 5 cut(s) 473, 732, 932, 1272, 1300
Hpy166II GTNNAC 7 cut(s) 456, 1012, 1050, 1174, 1428, 1489, 1525
Hpy188I TCNGA 4 cut(s) 135, 994, 1773, 1815
Hpy188III TCNNGA 8 cut(s) 294, 303, 344, 401, 407, 640, 806, 1657
Hpy8I GTNNAC 7 cut(s) 456, 1012, 1050, 1174, 1428, 1489, 1525
Hpy99I CGWCG 4 cut(s) 354, 460, 1450, 1623
HpyAV CCTTC 6 cut(s) 37, 142, 847, 851, 1033, 1759
HpyCH4III ACNGT 9 cut(s) 350, 484, 548, 568, 950, 1381, 1512, 1522, 1619
HpyCH4IV ACGT 3 cut(s) 1445, 1467, 1663
HpyCH4V TGCA 8 cut(s) 167, 288, 576, 717, 986, 1183, 1366, 1584
HpyF10VI GCNNNNNNNGC 8 cut(s) 582, 591, 600, 659, 837, 1043, 1189, 1458
HpySE526I ACGT 3 cut(s) 1445, 1467, 1663
Hsp92I GRCGYC 2 cut(s) 458, 1742
Hsp92II CATG 8 cut(s) 148, 427, 598, 781, 919, 982, 1187, 1499
HspAI GCGC 2 cut(s) 920, 1450
Ksp22I TGATCA 2 cut(s) 750, 1533
LguI GCTCTTC 1 cut(s) 1419
LmnI GCTCC 5 cut(s) 612, 1371, 1575, 1600, 1672
Lsp1109I GCAGC 3 cut(s) 300, 840, 1764
LweI GCATC 6 cut(s) 312, 995, 1047, 1341, 1593, 1613
MaeI CTAG 2 cut(s) 552, 1556
MaeII ACGT 3 cut(s) 1445, 1467, 1663
MbiI CCGCTC 2 cut(s) 1629, 1654
MflI RGATCY 6 cut(s) 102, 207, 340, 742, 911, 1819
MhlI GDGCHC 1 cut(s) 1572
MlsI TGGCCA 1 cut(s) 1385
MluCI AATT 6 cut(s) 381, 709, 786, 858, 1208, 1295
MluNI TGGCCA 1 cut(s) 1385
MlyI GAGTC 3 cut(s) 239, 1520, 1840
MmeI TCCRAC 2 cut(s) 235, 720
Mox20I TGGCCA 1 cut(s) 1385
Mph1103I ATGCAT 1 cut(s) 988
MroXI GAANNNNTTC 1 cut(s) 1022
MscI TGGCCA 1 cut(s) 1385
MseI TTAA 3 cut(s) 107, 174, 1794
MslI CAYNNNNRTG 4 cut(s) 1055, 1379, 1494, 1589
Msp20I TGGCCA 1 cut(s) 1385
MspA1I CMGCKG 1 cut(s) 85
MspI CCGG 5 cut(s) 473, 732, 932, 1272, 1300
MspR9I CCNGG 5 cut(s) 733, 812, 850, 1458, 1677
MvaI CCWGG 4 cut(s) 812, 850, 1458, 1677
MvnI CGCG 2 cut(s) 1450, 1452
MwoI GCNNNNNNNGC 8 cut(s) 582, 591, 600, 659, 837, 1043, 1189, 1458
NciI CCSGG 1 cut(s) 733
NcoI CCATGG 3 cut(s) 777, 915, 1495
NdeI CATATG 1 cut(s) 1307
NlaIII CATG 8 cut(s) 148, 427, 598, 781, 919, 982, 1187, 1499
NlaIV GGNNCC 6 cut(s) 652, 744, 913, 976, 1674, 1723
NmeAIII GCCGAG 2 cut(s) 548, 1770
NmuCI GTSAC 8 cut(s) 263, 904, 1028, 1160, 1267, 1506, 1512, 1546
NsiI ATGCAT 1 cut(s) 988
NspI RCATGY 2 cut(s) 598, 1187
PaeR7I CTCGAG 2 cut(s) 17, 1655
PciSI GCTCTTC 1 cut(s) 1419
PcsI WCGNNNNNNNCGW 1 cut(s) 1508
PdmI GAANNNNTTC 1 cut(s) 1022
PfeI GAWTC 1 cut(s) 1784
PfoI TCCNGGA 1 cut(s) 848
PkrI GCNGC 7 cut(s) 290, 467, 770, 830, 1628, 1653, 1779
PleI GAGTC 3 cut(s) 239, 1520, 1839
PpsI GAGTC 3 cut(s) 239, 1520, 1839
Ppu21I YACGTR 2 cut(s) 1468, 1664
Psp6I CCWGG 4 cut(s) 810, 848, 1456, 1675
PspEI GGTNACC 1 cut(s) 263
PspFI CCCAGC 2 cut(s) 1192, 1229
PspGI CCWGG 4 cut(s) 810, 848, 1456, 1675
PspN4I GGNNCC 6 cut(s) 652, 744, 913, 976, 1674, 1723
PspPI GGNCC 2 cut(s) 651, 1649
PspXI VCTCGAGB 1 cut(s) 17
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 6 cut(s) 102, 207, 340, 742, 911, 1819
PvuII CAGCTG 1 cut(s) 85
RsaI GTAC 8 cut(s) 23, 143, 550, 890, 926, 1073, 1427, 1488
RsaNI GTAC 8 cut(s) 22, 142, 549, 889, 925, 1072, 1426, 1487
RseI CAYNNNNRTG 4 cut(s) 1055, 1379, 1494, 1589
SalI GTCGAC 1 cut(s) 454
SapI GCTCTTC 1 cut(s) 1419
SaqAI TTAA 3 cut(s) 107, 174, 1794
SatI GCNGC 7 cut(s) 289, 466, 769, 829, 1627, 1652, 1778
Sau96I GGNCC 2 cut(s) 651, 1649
SchI GAGTC 3 cut(s) 239, 1520, 1840
ScrFI CCNGG 5 cut(s) 733, 812, 850, 1458, 1677
SduI GDGCHC 1 cut(s) 1572
SfaNI GCATC 6 cut(s) 312, 995, 1047, 1341, 1593, 1613
SfcI CTRYAG 1 cut(s) 1644
Sfr274I CTCGAG 2 cut(s) 17, 1655
SlaI CTCGAG 2 cut(s) 17, 1655
SmiMI CAYNNNNRTG 4 cut(s) 1055, 1379, 1494, 1589
SmlI CTYRAG 2 cut(s) 17, 1655
SmoI CTYRAG 2 cut(s) 17, 1655
SnaBI TACGTA 1 cut(s) 1468
Sse9I AATT 6 cut(s) 381, 709, 786, 858, 1208, 1295
SsiI CCGC 7 cut(s) 465, 628, 769, 1197, 1292, 1627, 1652
SspMI CTAG 2 cut(s) 552, 1556
StyD4I CCNGG 5 cut(s) 731, 810, 848, 1456, 1675
StyI CCWWGG 4 cut(s) 777, 915, 1495, 1714
TaaI ACNGT 9 cut(s) 350, 484, 548, 568, 950, 1381, 1512, 1522, 1619
TaiI ACGT 3 cut(s) 1448, 1470, 1666
TaqI TCGA 8 cut(s) 18, 345, 352, 455, 693, 1335, 1621, 1656
TasI AATT 6 cut(s) 381, 709, 786, 858, 1208, 1295
TatI WGTACW 6 cut(s) 21, 141, 548, 888, 924, 1425
TauI GCSGC 4 cut(s) 468, 771, 1629, 1654
TfiI GAWTC 1 cut(s) 1784
Tru1I TTAA 3 cut(s) 107, 174, 1794
Tru9I TTAA 3 cut(s) 107, 174, 1794
TscAI CASTG 4 cut(s) 913, 955, 1345, 1596
TseFI GTSAC 8 cut(s) 263, 904, 1028, 1160, 1267, 1506, 1512, 1546
TseI GCWGC 3 cut(s) 288, 828, 1777
Tsp45I GTSAC 8 cut(s) 263, 904, 1028, 1160, 1267, 1506, 1512, 1546
TspDTI ATGAA 5 cut(s) 161, 1221, 1294, 1368, 1696
TspGWI ACGGA 1 cut(s) 493
TspRI CASTG 4 cut(s) 913, 955, 1345, 1596
XapI RAATTY 2 cut(s) 786, 858
XceI RCATGY 2 cut(s) 598, 1187
XcmI CCANNNNNNNNNTGG 1 cut(s) 611
XhoI CTCGAG 2 cut(s) 17, 1655
XmiI GTMKAC 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 1022
XspI CTAG 2 cut(s) 552, 1556
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.