Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009362

Physical Location & Seq

Genomic Coordinates Reverse (-)

41930461 .. 41932991

Gene Structure 2531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1304200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGATGGGAAGAGACTGGAGTACACGGGTGAGGAGGCATTGAAGGAGATTGAGAGGCTCACAGCCAAGGCTGGTAGGGTTCAGTTGAACATTTTGAAGGAGATCTTATCACAAAATTCGAAAACCGAATATTTGAGTAAGTATATGAAGGGATCAAAAGATGTATCAGCTTTTAAGCAATGTGTCCCAGTCATTACTTACAAGGCCATTCAGCCTTACATCCAAAGGATTGCTAATGGTGAAGACTCTTCTCTCATTACTGGCCACCCCATAACTGAAATGTTGTGCAGTTCAGGAACTTCAGGAAGAGAGCCTAAGATGATGCCATCGATCGCTGAAGATCTGGATCGTAGAACCTTTCTATATAATCTCATTATGCCGATTATGAACCAGTATGTCCCTGGACTGGATGAGGGCAAGGCTATGTTCCTCTACTTTGTGAAGGCAGAAATGTCAACACCGTGCGGCTTACCAGCTCGAACGGTGCTTACCAGCTACTACAAGAGCAGCCACTTCAAGTGCCGTGGCCCTGACCCTTTTAACAATTGTACAAGTCCTGACCAGACCATTTTTTGCAATGACAGCAACCAAAGCATGTATTGCCAACTCCTCTCCGGCCTAGTCCACCGCCACCAAGTCCTGAGGCTTGGCGCCGTCTTTGCATCCGCCTTTCTACGAGCCATTTCATTCCTAGAACGAAATTGGATCAACTTTTGCAATGACATACGTACCGGCCAATTAGATCCTTTAATCACAGATCCCGAATGCCGGTCATCAATGGCTCCCTTAATTTCCGTCCCTAACCCTAGTCTAGCCGATGAGATCAATGAAATTTGTAGCCTTCCATCATGGAAGGGAATTGTATGCCATCTTTGGCCTAAAGCGAAGTACATTGAGGCTGTTGTCACGGGGTCCATGGCACAATATATCCCAGCTCTAGAGTACTATAGTGACGGAAAACTTCCCTTGGTTTGCACCATGTATGCTTCCTCAGAGTGCTACTTTGGTGTCAACTTGAAGCCCTTGTCCGACCCTGCTGACGTGTCGTTTACCCTTTTGCCGAATATGGGGTATTTCGAATTCATACCGTTGGGAGAGAATGGGACTCGACTCATGAACATAGATGAGGATGAGGAGGTGCGTAGTGATAAACTTGTTGATTTGGTGCAAGTGAGGCTTGGCTGCTATTATGAACTGGTGGTCACCACCTTTGCCGGATTGAATCGTTATCGAATCGGTGATGTGCTCCAAGTGACTGGATTTCACAATAAAGCACCACAATTTCGGTTCATCTGTAGGAGGAATGTTGTTCTCAGCATTGACACTGACAAAACTAATGAGGAGGACTTGCACAAGAGCGTTTCTGTAGCAAAGAAGTTGTTAGAACCCTTCAATGCTCTTCTTGTGGAGTACACTAGCTACGCGGATACGTCATGTCTACCCGGCCACTACGTACTGTATTGGGAAATTATATATCATGGATCAATGGTGGATTCAACAGCCCCACTTGATGATAAGGTGATGCAAGAATGCTGCATTGCTGTGGAAGAGGAACTTGACTACATCTATCGCCGGTGCCGCACGTATGACAAGTCCGTAGGGCCGCTTGAGATTCGGGTGGTGGAGCCTGGGACGTTTGACGCGTTGATGGACTATTTCATCAGCCAAGGGGGTTCGATCAATCAATATAAAACGCCGAGGTGCATCAAGTCGAATAAGGCGCTTAAGCTGCTTGATTCTAATGTCAAGGCATGTTTCTTTAGTCCAAGAGATCCTAAGTGGATCCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

597

Amino Acids

67.41

Weight (kDa)

5.75

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	14 - 319	1.5e-114	GH3 family N-terminal domain
GH3_M	PF23571	350 - 433	4e-29	GH3 family central domain
GH3_C	PF23572	448 - 572	3.1e-35	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47750
fragaria_vesca	FvH4_2g25330 FvH4_2g25330 FvH4_2g25330
malus_domestica	MD03G1284700.v1.1 MD11G1304200.v1.1
prunus_persica	Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1 Prupe.8G257800_v2.0.a1
pyrus_communis	pycom03g22560
rosa_chinensis	RchiOBHm_Chr6g0293491
rosa_laevigata	RLG00000011945
rosa_multiflora	Rmu_sc0006269.1_g000011
rosa_roxburghii	Rroxscaffold_7G00174130
rosa_rugosa	Rorug06G0235800 Rorug06G0235900
rosa_samantha	Rh6AG348600 Rh6BG356100 Rh6CG362700 Rh6DG349700
rosa_wichuraiana	Rw6G030320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	650, 1575
AccI	GTMKAC	1 cut(s)	1438
AccII	CGCG	2 cut(s)	1424, 1643
AciI	CCGC	6 cut(s)	465, 628, 666, 1424, 1579, 1604
AclWI	GGATC	9 cut(s)	160, 354, 713, 737, 752, 1489, 1766, 1777, 1790
AcoI	YGGCCR	3 cut(s)	262, 733, 1444
AcsI	RAATTY	3 cut(s)	115, 831, 1079
AcuI	CTGAAG	2 cut(s)	285, 357
AcyI	GRCGYC	1 cut(s)	651
AfaI	GTAC	7 cut(s)	23, 550, 730, 890, 944, 1412, 1455
AfiI	CCNNNNNNNGG	3 cut(s)	406, 768, 1067
AflII	CTTAAG	1 cut(s)	1724
AflIII	ACRYGT	2 cut(s)	1041, 1641
AgsI	TTSAA	8 cut(s)	43, 88, 97, 517, 1018, 1222, 1393, 1497
AjiI	CACGTC	1 cut(s)	1042
AjnI	CCWGG	2 cut(s)	400, 1627
AluBI	AGCT	6 cut(s)	170, 476, 495, 935, 1419, 1729
AluI	AGCT	6 cut(s)	170, 476, 495, 935, 1419, 1729
Alw21I	GWGCWC	1 cut(s)	1248
Alw26I	GTCTC	1 cut(s)	7
AlwI	GGATC	9 cut(s)	160, 354, 713, 737, 752, 1489, 1766, 1777, 1790
AoxI	GGCC	8 cut(s)	204, 262, 526, 616, 733, 875, 1444, 1601
ApeKI	GCWGC	4 cut(s)	507, 1182, 1533, 1729
ApoI	RAATTY	3 cut(s)	115, 831, 1079
AspLEI	GCGC	2 cut(s)	653, 1723
AspS9I	GGNCC	3 cut(s)	527, 912, 1601
AsuC2I	CCSGG	1 cut(s)	1443
AsuHPI	GGTGA	5 cut(s)	41, 251, 1195, 1250, 1531
AsuII	TTCGAA	2 cut(s)	119, 1077
AvaII	GGWCC	1 cut(s)	912
AxyI	CCTNAGG	1 cut(s)	641
BaeI	ACNNNNGTAYC	2 cut(s)	712, 745
BalI	TGGCCA	1 cut(s)	264
BamHI	GGATCC	1 cut(s)	1782
BanI	GGYRCC	2 cut(s)	650, 1575
BbsI	GAAGAC	1 cut(s)	249
Bbv12I	GWGCWC	1 cut(s)	1248
BbvI	GCAGC	4 cut(s)	519, 1169, 1520, 1716
BccI	CCATC	4 cut(s)	334, 853, 876, 1642
BceAI	ACGGC	2 cut(s)	507, 638
BciT130I	CCWGG	2 cut(s)	402, 1629
BciVI	GTATCC	1 cut(s)	1420
BcnI	CCSGG	1 cut(s)	1443
BcoDI	GTCTC	1 cut(s)	7
BfaI	CTAG	6 cut(s)	620, 692, 807, 812, 938, 1416
BfmI	CTRYAG	3 cut(s)	946, 1294, 1365
BfoI	RGCGCY	2 cut(s)	654, 1724
BfrI	CTTAAG	1 cut(s)	1724
BfuI	GTATCC	1 cut(s)	1420
BglII	AGATCT	2 cut(s)	102, 340
BisI	GCNGC	7 cut(s)	466, 508, 1183, 1534, 1579, 1604, 1730
BlsI	GCNGC	7 cut(s)	467, 509, 1184, 1535, 1580, 1605, 1731
BmcAI	AGTACT	1 cut(s)	944
Bme1390I	CCNGG	3 cut(s)	402, 1443, 1629
Bme18I	GGWCC	1 cut(s)	912
BmgBI	CACGTC	1 cut(s)	1042
BmgT120I	GGNCC	3 cut(s)	527, 912, 1601
BmiI	GGNNCC	6 cut(s)	652, 783, 913, 1577, 1626, 1784
BmrFI	CCNGG	3 cut(s)	402, 1443, 1629
BmrI	ACTGGG	1 cut(s)	182
BmsI	GCATC	4 cut(s)	312, 671, 1512, 1713
BmuI	ACTGGG	1 cut(s)	182
BpiI	GAAGAC	1 cut(s)	249
BpmI	CTGGAG	1 cut(s)	38
Bpu14I	TTCGAA	2 cut(s)	119, 1077
BpuEI	CTTGAG	1 cut(s)	1628
BpuMI	CCSGG	1 cut(s)	1443
Bsa29I	ATCGAT	1 cut(s)	329
BsaAI	YACGTR	3 cut(s)	728, 1453, 1584
BsaBI	GATNNNNATC	1 cut(s)	345
BsaHI	GRCGYC	1 cut(s)	651
BsaJI	CCNNGG	8 cut(s)	66, 400, 523, 915, 966, 1628, 1666, 1697
Bsc4I	CCNNNNNNNGG	3 cut(s)	406, 768, 1067
Bse118I	RCCGGY	3 cut(s)	731, 768, 1572
Bse1I	ACTGG	7 cut(s)	21, 188, 265, 391, 411, 1200, 1261
Bse21I	CCTNAGG	1 cut(s)	641
Bse3DI	GCAATG	4 cut(s)	185, 583, 724, 1536
Bse8I	GATNNNNATC	1 cut(s)	345
BseBI	CCWGG	2 cut(s)	402, 1629
BseCI	ATCGAT	1 cut(s)	329
BseDI	CCNNGG	8 cut(s)	66, 400, 523, 915, 966, 1628, 1666, 1697
BseGI	GGATG	5 cut(s)	10, 219, 415, 662, 1135
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	3 cut(s)	406, 768, 1067
BseMI	GCAATG	4 cut(s)	185, 583, 724, 1536
BseMII	CTCAG	3 cut(s)	632, 1005, 1327
BseNI	ACTGG	7 cut(s)	21, 188, 265, 391, 411, 1200, 1261
BseRI	GAGGAG	4 cut(s)	47, 599, 1148, 1355
BseXI	GCAGC	4 cut(s)	519, 1169, 1520, 1716
BseYI	CCCAGC	1 cut(s)	931
BsgI	GTGCAG	1 cut(s)	307
Bsh1236I	CGCG	2 cut(s)	1424, 1643
Bsh1285I	CGRYCG	1 cut(s)	333
BshFI	GGCC	8 cut(s)	206, 264, 528, 618, 735, 877, 1446, 1603
BshNI	GGYRCC	2 cut(s)	650, 1575
BshVI	ATCGAT	1 cut(s)	329
BsiEI	CGRYCG	1 cut(s)	333
BsiHKAI	GWGCWC	1 cut(s)	1248
BsiSI	CCGG	6 cut(s)	615, 732, 769, 1215, 1443, 1573
BslFI	GGGAC	5 cut(s)	170, 383, 782, 1117, 1645
BslI	CCNNNNNNNGG	3 cut(s)	406, 768, 1067
BsmAI	GTCTC	1 cut(s)	7
BsmFI	GGGAC	5 cut(s)	170, 383, 782, 1117, 1645
BsmI	GAATGC	2 cut(s)	770, 1535
BsnI	GGCC	8 cut(s)	206, 264, 528, 618, 735, 877, 1446, 1603
Bsp119I	TTCGAA	2 cut(s)	119, 1077
Bsp1286I	GDGCHC	1 cut(s)	1248
Bsp1407I	TGTACA	1 cut(s)	548
Bsp19I	CCATGG	1 cut(s)	915
BspACI	CCGC	6 cut(s)	465, 628, 666, 1424, 1579, 1604
BspANI	GGCC	8 cut(s)	206, 264, 528, 618, 735, 877, 1446, 1603
BspCNI	CTCAG	3 cut(s)	633, 1004, 1326
BspDI	ATCGAT	1 cut(s)	329
BspFNI	CGCG	2 cut(s)	1424, 1643
BspHI	TCATGA	1 cut(s)	1113
BspLI	GGNNCC	6 cut(s)	652, 783, 913, 1577, 1626, 1784
BspPI	GGATC	9 cut(s)	160, 354, 713, 737, 752, 1489, 1766, 1777, 1790
BspQI	GCTCTTC	1 cut(s)	1404
BspT104I	TTCGAA	2 cut(s)	119, 1077
BspT107I	GGYRCC	2 cut(s)	650, 1575
BspTI	CTTAAG	1 cut(s)	1724
BsrDI	GCAATG	4 cut(s)	185, 583, 724, 1536
BsrFI	RCCGGY	3 cut(s)	731, 768, 1572
BsrGI	TGTACA	1 cut(s)	548
BsrI	ACTGG	7 cut(s)	21, 188, 265, 391, 411, 1200, 1261
BssAI	RCCGGY	3 cut(s)	731, 768, 1572
BssECI	CCNNGG	8 cut(s)	66, 400, 523, 915, 966, 1628, 1666, 1697
BssNI	GRCGYC	1 cut(s)	651
BssT1I	CCWWGG	4 cut(s)	66, 915, 966, 1666
Bst2UI	CCWGG	2 cut(s)	402, 1629
Bst4CI	ACNGT	4 cut(s)	462, 484, 1089, 1458
Bst6I	CTCTTC	5 cut(s)	5, 253, 301, 1404, 1542
BstACI	GRCGYC	1 cut(s)	651
BstAFI	CTTAAG	1 cut(s)	1724
BstAPI	GCANNNNNTGC	1 cut(s)	600
BstAUI	TGTACA	1 cut(s)	548
BstBAI	YACGTR	3 cut(s)	728, 1453, 1584
BstBI	TTCGAA	2 cut(s)	119, 1077
BstDEI	CTNAG	6 cut(s)	315, 641, 991, 1313, 1776, 1788
BstDSI	CCRYGG	2 cut(s)	523, 915
BstEII	GGTNACC	1 cut(s)	1201
BstF5I	GGATG	5 cut(s)	10, 219, 415, 662, 1135
BstFNI	CGCG	2 cut(s)	1424, 1643
BstH2I	RGCGCY	2 cut(s)	654, 1724
BstHHI	GCGC	2 cut(s)	653, 1723
BstMAI	GTCTC	1 cut(s)	7
BstMCI	CGRYCG	1 cut(s)	333
BstMWI	GCNNNNNNNGC	7 cut(s)	582, 591, 600, 659, 1174, 1578, 1729
BstNI	CCWGG	2 cut(s)	402, 1629
BstNSI	RCATGY	2 cut(s)	598, 1755
BstPI	GGTNACC	1 cut(s)	1201
BstSCI	CCNGG	3 cut(s)	400, 1441, 1627
BstSFI	CTRYAG	3 cut(s)	946, 1294, 1365
BstSNI	TACGTA	2 cut(s)	728, 1453
BstUI	CGCG	2 cut(s)	1424, 1643
BstV1I	GCAGC	4 cut(s)	519, 1169, 1520, 1716
BstV2I	GAAGAC	1 cut(s)	249
BstX2I	RGATCY	6 cut(s)	102, 340, 742, 757, 1771, 1782
BstXI	CCANNNNNNTGG	1 cut(s)	1256
BstYI	RGATCY	6 cut(s)	102, 340, 742, 757, 1771, 1782
Bsu15I	ATCGAT	1 cut(s)	329
Bsu36I	CCTNAGG	1 cut(s)	641
BsuI	GTATCC	1 cut(s)	1420
BsuRI	GGCC	8 cut(s)	206, 264, 528, 618, 735, 877, 1446, 1603
BsuTUI	ATCGAT	1 cut(s)	329
BtgI	CCRYGG	2 cut(s)	523, 915
BtrI	CACGTC	1 cut(s)	1042
BtsCI	GGATG	5 cut(s)	10, 219, 415, 662, 1135
BtsIMutI	CAGTG	1 cut(s)	1323
CciI	TCATGA	1 cut(s)	1113
CfoI	GCGC	2 cut(s)	653, 1723
Cfr10I	RCCGGY	3 cut(s)	731, 768, 1572
Cfr13I	GGNCC	3 cut(s)	527, 912, 1601
ClaI	ATCGAT	1 cut(s)	329
CseI	GACGC	1 cut(s)	1649
Csp6I	GTAC	7 cut(s)	22, 549, 729, 889, 943, 1411, 1454
CspCI	CAANNNNNGTGG	2 cut(s)	505, 540
CviAII	CATG	8 cut(s)	595, 849, 916, 979, 1114, 1434, 1478, 1752
CviQI	GTAC	7 cut(s)	22, 549, 729, 889, 943, 1411, 1454
DdeI	CTNAG	6 cut(s)	315, 641, 991, 1313, 1776, 1788
DinI	GGCGCC	1 cut(s)	652
EaeI	YGGCCR	3 cut(s)	262, 733, 1444
Eam1104I	CTCTTC	5 cut(s)	5, 253, 301, 1404, 1542
EarI	CTCTTC	5 cut(s)	5, 253, 301, 1404, 1542
EciI	GGCGGA	1 cut(s)	655
Eco105I	TACGTA	2 cut(s)	728, 1453
Eco130I	CCWWGG	4 cut(s)	66, 915, 966, 1666
Eco47I	GGWCC	1 cut(s)	912
Eco57I	CTGAAG	2 cut(s)	285, 357
Eco81I	CCTNAGG	1 cut(s)	641
Eco91I	GGTNACC	1 cut(s)	1201
EcoO65I	GGTNACC	1 cut(s)	1201
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	2 cut(s)	400, 1627
EcoT14I	CCWWGG	4 cut(s)	66, 915, 966, 1666
EgeI	GGCGCC	1 cut(s)	652
EheI	GGCGCC	1 cut(s)	652
ErhI	CCWWGG	4 cut(s)	66, 915, 966, 1666
FaeI	CATG	8 cut(s)	598, 852, 919, 982, 1117, 1437, 1481, 1755
FalI	AAGNNNNNCTT	6 cut(s)	89, 121, 1161, 1193, 1539, 1571
FaqI	GGGAC	5 cut(s)	170, 383, 782, 1117, 1645
FatI	CATG	8 cut(s)	594, 848, 915, 978, 1113, 1433, 1477, 1751
FblI	GTMKAC	1 cut(s)	1438
Fnu4HI	GCNGC	7 cut(s)	466, 508, 1183, 1534, 1579, 1604, 1730
FokI	GGATG	5 cut(s)	17, 206, 422, 649, 1142
Fsp4HI	GCNGC	7 cut(s)	466, 508, 1183, 1534, 1579, 1604, 1730
FspBI	CTAG	6 cut(s)	620, 692, 807, 812, 938, 1416
GlaI	GCGC	2 cut(s)	652, 1722
GluI	GCNGC	7 cut(s)	466, 508, 1183, 1534, 1579, 1604, 1730
GsaI	CCCAGC	1 cut(s)	935
GsuI	CTGGAG	1 cut(s)	38
HaeII	RGCGCY	2 cut(s)	654, 1724
HaeIII	GGCC	8 cut(s)	206, 264, 528, 618, 735, 877, 1446, 1603
HapII	CCGG	6 cut(s)	615, 732, 769, 1215, 1443, 1573
HgaI	GACGC	1 cut(s)	1649
HhaI	GCGC	2 cut(s)	653, 1723
Hin1I	GRCGYC	1 cut(s)	651
Hin1II	CATG	8 cut(s)	598, 852, 919, 982, 1117, 1437, 1481, 1755
Hin6I	GCGC	2 cut(s)	651, 1721
HinP1I	GCGC	2 cut(s)	651, 1721
HincII	GTYRAC	2 cut(s)	456, 1012
HindII	GTYRAC	2 cut(s)	456, 1012
HinfI	GANTC	8 cut(s)	245, 1105, 1110, 1222, 1233, 1493, 1612, 1736
HpaII	CCGG	6 cut(s)	615, 732, 769, 1215, 1443, 1573
HphI	GGTGA	5 cut(s)	41, 251, 1195, 1250, 1531
Hpy166II	GTNNAC	7 cut(s)	24, 456, 625, 1012, 1050, 1413, 1439
Hpy188I	TCNGA	2 cut(s)	994, 1030
Hpy188III	TCNNGA	8 cut(s)	294, 303, 344, 557, 640, 761, 938, 1114
Hpy8I	GTNNAC	7 cut(s)	24, 456, 625, 1012, 1050, 1413, 1439
HpyAV	CCTTC	7 cut(s)	37, 91, 142, 436, 847, 851, 1399
HpyCH4III	ACNGT	4 cut(s)	462, 484, 1089, 1458
HpyCH4IV	ACGT	6 cut(s)	727, 1041, 1430, 1452, 1583, 1634
HpyF10VI	GCNNNNNNNGC	7 cut(s)	582, 591, 600, 659, 1174, 1578, 1729
HpyF3I	CTNAG	6 cut(s)	315, 641, 991, 1313, 1776, 1788
HpySE526I	ACGT	6 cut(s)	727, 1041, 1430, 1452, 1583, 1634
Hsp92I	GRCGYC	1 cut(s)	651
Hsp92II	CATG	8 cut(s)	598, 852, 919, 982, 1117, 1437, 1481, 1755
HspAI	GCGC	2 cut(s)	651, 1721
KasI	GGCGCC	1 cut(s)	650
LguI	GCTCTTC	1 cut(s)	1404
LmnI	GCTCC	3 cut(s)	787, 1251, 1624
Lsp1109I	GCAGC	4 cut(s)	519, 1169, 1520, 1716
LweI	GCATC	4 cut(s)	312, 671, 1512, 1713
MaeI	CTAG	6 cut(s)	620, 692, 807, 812, 938, 1416
MaeII	ACGT	6 cut(s)	727, 1041, 1430, 1452, 1583, 1634
MaeIII	GTNAC	4 cut(s)	904, 950, 1201, 1252
MboII	GAAGA	7 cut(s)	22, 240, 254, 318, 350, 1391, 1559
MfeI	CAATTG	1 cut(s)	544
MflI	RGATCY	6 cut(s)	102, 340, 742, 757, 1771, 1782
MhlI	GDGCHC	1 cut(s)	1248
MlsI	TGGCCA	1 cut(s)	264
MluI	ACGCGT	1 cut(s)	1641
MluNI	TGGCCA	1 cut(s)	264
Mly113I	GGCGCC	1 cut(s)	651
MlyI	GAGTC	3 cut(s)	239, 1099, 1104
MmeI	TCCRAC	1 cut(s)	1053
Mox20I	TGGCCA	1 cut(s)	264
MscI	TGGCCA	1 cut(s)	264
MseI	TTAA	5 cut(s)	174, 540, 749, 788, 1725
MslI	CAYNNNNRTG	1 cut(s)	1541
Msp20I	TGGCCA	1 cut(s)	264
MspCI	CTTAAG	1 cut(s)	1724
MspI	CCGG	6 cut(s)	615, 732, 769, 1215, 1443, 1573
MspR9I	CCNGG	3 cut(s)	402, 1443, 1629
MunI	CAATTG	1 cut(s)	544
Mva1269I	GAATGC	2 cut(s)	770, 1535
MvaI	CCWGG	2 cut(s)	402, 1629
MvnI	CGCG	2 cut(s)	1424, 1643
MwoI	GCNNNNNNNGC	7 cut(s)	582, 591, 600, 659, 1174, 1578, 1729
NarI	GGCGCC	1 cut(s)	651
NciI	CCSGG	1 cut(s)	1443
NcoI	CCATGG	1 cut(s)	915
NlaIII	CATG	8 cut(s)	598, 852, 919, 982, 1117, 1437, 1481, 1755
NlaIV	GGNNCC	6 cut(s)	652, 783, 913, 1577, 1626, 1784
NmeAIII	GCCGAG	1 cut(s)	1722
NmuCI	GTSAC	4 cut(s)	904, 950, 1201, 1252
NspI	RCATGY	2 cut(s)	598, 1755
NspV	TTCGAA	2 cut(s)	119, 1077
PagI	TCATGA	1 cut(s)	1113
PciSI	GCTCTTC	1 cut(s)	1404
PcsI	WCGNNNNNNNCGW	1 cut(s)	1640
PctI	GAATGC	2 cut(s)	770, 1535
PfeI	GAWTC	5 cut(s)	1222, 1233, 1493, 1612, 1736
PkrI	GCNGC	7 cut(s)	467, 509, 1184, 1535, 1580, 1605, 1731
Ple19I	CGATCG	1 cut(s)	333
PleI	GAGTC	3 cut(s)	239, 1099, 1104
PluTI	GGCGCC	1 cut(s)	654
PpsI	GAGTC	3 cut(s)	239, 1099, 1104
Ppu21I	YACGTR	3 cut(s)	728, 1453, 1584
Psp6I	CCWGG	2 cut(s)	400, 1627
PspEI	GGTNACC	1 cut(s)	1201
PspFI	CCCAGC	1 cut(s)	931
PspGI	CCWGG	2 cut(s)	400, 1627
PspN4I	GGNNCC	6 cut(s)	652, 783, 913, 1577, 1626, 1784
PspPI	GGNCC	3 cut(s)	527, 912, 1601
PsrI	GAACNNNNNNTAC	2 cut(s)	472, 504
PsuI	RGATCY	6 cut(s)	102, 340, 742, 757, 1771, 1782
PvuI	CGATCG	1 cut(s)	333
RsaI	GTAC	7 cut(s)	23, 550, 730, 890, 944, 1412, 1455
RsaNI	GTAC	7 cut(s)	22, 549, 729, 889, 943, 1411, 1454
RseI	CAYNNNNRTG	1 cut(s)	1541
SapI	GCTCTTC	1 cut(s)	1404
SaqAI	TTAA	5 cut(s)	174, 540, 749, 788, 1725
SatI	GCNGC	7 cut(s)	466, 508, 1183, 1534, 1579, 1604, 1730
Sau96I	GGNCC	3 cut(s)	527, 912, 1601
ScaI	AGTACT	1 cut(s)	944
SchI	GAGTC	3 cut(s)	239, 1099, 1104
ScrFI	CCNGG	3 cut(s)	402, 1443, 1629
SduI	GDGCHC	1 cut(s)	1248
SfaNI	GCATC	4 cut(s)	312, 671, 1512, 1713
SfcI	CTRYAG	3 cut(s)	946, 1294, 1365
SfoI	GGCGCC	1 cut(s)	652
SfuI	TTCGAA	2 cut(s)	119, 1077
SgrAI	CRCCGGYG	1 cut(s)	1572
SinI	GGWCC	1 cut(s)	912
SmiMI	CAYNNNNRTG	1 cut(s)	1541
SmlI	CTYRAG	2 cut(s)	1607, 1724
SmoI	CTYRAG	2 cut(s)	1607, 1724
SnaBI	TACGTA	2 cut(s)	728, 1453
SsiI	CCGC	6 cut(s)	465, 628, 666, 1424, 1579, 1604
SspDI	GGCGCC	1 cut(s)	650
SspI	AATATT	1 cut(s)	131
SspMI	CTAG	6 cut(s)	620, 692, 807, 812, 938, 1416
StyD4I	CCNGG	3 cut(s)	400, 1441, 1627
StyI	CCWWGG	4 cut(s)	66, 915, 966, 1666
TaaI	ACNGT	4 cut(s)	462, 484, 1089, 1458
TaiI	ACGT	6 cut(s)	730, 1044, 1433, 1455, 1586, 1637
TaqI	TCGA	8 cut(s)	119, 329, 478, 1077, 1108, 1231, 1676, 1712
TatI	WGTACW	5 cut(s)	21, 548, 888, 942, 1410
TauI	GCSGC	3 cut(s)	468, 1581, 1606
TfiI	GAWTC	5 cut(s)	1222, 1233, 1493, 1612, 1736
Tru1I	TTAA	5 cut(s)	174, 540, 749, 788, 1725
Tru9I	TTAA	5 cut(s)	174, 540, 749, 788, 1725
TscAI	CASTG	1 cut(s)	1330
TseFI	GTSAC	4 cut(s)	904, 950, 1201, 1252
TseI	GCWGC	4 cut(s)	507, 1182, 1533, 1729
Tsp45I	GTSAC	4 cut(s)	904, 950, 1201, 1252
TspDTI	ATGAA	9 cut(s)	161, 401, 675, 843, 1072, 1130, 1206, 1279, 1648
TspGWI	ACGGA	3 cut(s)	784, 969, 1585
TspRI	CASTG	1 cut(s)	1330
Vha464I	CTTAAG	1 cut(s)	1724
VpaK11BI	GGWCC	1 cut(s)	912
XapI	RAATTY	3 cut(s)	115, 831, 1079
XbaI	TCTAGA	1 cut(s)	937
XceI	RCATGY	2 cut(s)	598, 1755
XcmI	CCANNNNNNNNNTGG	1 cut(s)	398
XmiI	GTMKAC	1 cut(s)	1438
XspI	CTAG	6 cut(s)	620, 692, 807, 812, 938, 1416
ZrmI	AGTACT	1 cut(s)	944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.