Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012137

Physical Location & Seq

Genomic Coordinates Reverse (-)

19636867 .. 19638678

Gene Structure 1812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G47990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGAGGAAGAGCTTCGTGTTCGGCTGAATGACCATCAAGTGTCAAAGGTTTTCCCTGTGAAGCCCAAATCAACGGCGAAACCTGTTTCCGAATCGGAGACTCCGGAATCGAGGTACTGGTCCTCCTTCAAAAATCATTCCACACCTAATCTCGTCTCCTCCGTAGCCGCTTTGGCTTTCTCTCCGGTCCACCCTCACTCCTTGGCCGTCGCTCACTCCGCCACCGTCTCCCTCTTTTCCTCGCAGTCGCTTTCCTCCTCCCGCCGTTTCTCCTTCCGCGATGTTGTCTCCTCCGTCTGTTTCCGTTCCGACGGAGCTCTTTTCGCGGCATGCGATCTCTCCGGTGTGGTCCAGGTCTTCGACATCAAGGAACGAATGGCTCTCCGTACTCTCCGCTCCCACAGCGCCCCCGCTCGATTCGTCAAGTATCCAGTTCAGGACAAGCTCCACTTGGTCTCCGGAGGCGACGATGGAGTCGTCAAGTACTGGGATGTCGCCGGAGCAACAGTCATCTCAGATCTGCTAGGCCACAAGGATTATGTCCGCTGCGGTGATTGCTCGCCCGTCAACGATTCAATGTTGGTAACAGGCTCTTACGATCACACGGTGAAGGTGTGGGACGCCAGAGTCCACACGTCCAATTGGATTGCCGAGATCAACCACGGACTCCCAGTGGAGGACGTCGTATACCTGCCTTCCGGTGGATTGATCGCAACCGCTGGTGGCAACAGCGTCAAGGTATGGGATTTGATCGGAGGCGGGAAGATGGTTTGCTCCATGGAGAGTCACAACAAGACCGTCACGTCTCTCCGCGTTGCGAGAATGGAATCGGCTGAGAGTCGACTTGTGAGCGTTGCTTTGGACGGATACATGAAAGTCTTCGATTACGGGAGAGCAAAGGTGACTTACTCTATGAGGTTTCCTGCTCCTCTCATGTCTCTTGGCCTTTCCCCCGATGGTTCCACTCGGGTAATCGGAGGGTCTAATGGCATGGTGTTTGCCGGTAAGAAGAAGGTGAGAGATGTTGTTGGAGGACAGAAGAAAAGTTTGAATCTCTGGAGTCTGATAAGCGATGTGGATGAGAGTAGGAGAAGGGCACTGAGGCCTACGTATTTCAGGTACTTCCAGAGAGGGCAGAGCGAGAAGCCATCCAAAGATGATTACTTGGTCAAGGAGAAGAAAGGATTGAAGCTGACGAGACACGATAAGCTCTTGAAGAAGTTCAGGCATAAGGAAGCTCTGGTCTCGGTGTTGGAGGAGAAGAAACCGGCCAATGTTGTGGCAGTGATGGAAGAATTAGTGGCGAGGAGGAAGCTGATGAAGTGCGTGTCGAATATGGAGGAAGGCGAGTTGGGAATGCTGCTAGGCTTCTTACAAAGGTACTGCACTGTGCAGAGGTATTCAGGATTGTTGATGGGATTGACGAAGAAGGTTTTGGAGACGAGAGCTGAAGACATCAAGGGTAAAAACGAGTTTAAAGGGCTTCTCAGGAACTTGAAGAGGGAGGTTAATCAGGAGATTAGGATACAACAGTCTCTTCTAGAGATTCAGGGTGTTATTGCTCCTTTGATGAGAATTGCGGGTAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009561 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

UTP15_C WD40

Protein Analysis

530

Amino Acids

58.9

Weight (kDa)

9.62

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	30 - 138	5.6e-06	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	36 - 134	3.3e-07	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	44 - 240	3.3e-20	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	53 - 146	2.9e-06	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	53 - 207	2.2e-18	WDR3 first beta-propeller domain
WDR55	PF24796	54 - 182	6.2e-08	WDR55
Beta-prop_EML_2	PF23414	56 - 185	9.4e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz	PF24807	66 - 330	8.7e-21	CDC20/Fizzy WD40 domain
Beta-prop_EML	PF23409	78 - 251	5.7e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	92 - 172	1.4e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	95 - 249	1e-22	WDR5 beta-propeller domain
WD40_Gbeta	PF25391	98 - 284	1.7e-06	G protein beta WD-40 repeat protein
Beta-prop_EIPR1	PF23609	107 - 206	2.4e-09	EIPR1 beta-propeller
Beta-prop_WDR41	PF25178	127 - 250	5.3e-07	WDR41
WD40_Prp19	PF24814	147 - 242	4.2e-10	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	172 - 298	2.6e-06	TEP-1 second beta-propeller
WD40	PF00400	172 - 207	1e-05	WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd	PF25168	177 - 321	1.3e-06	WDR36/Utp21 second beta-propeller domain
WDR55	PF24796	193 - 333	5.1e-09	WDR55
Beta-prop_WDR3_1st	PF25173	223 - 329	1.6e-06	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	225 - 332	6.3e-07	THOC3 beta-propeller domain
UTP15_C	PF09384	381 - 522	2.8e-37	UTP15 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0012137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47990
fragaria_vesca	FvH4_5g25500
malus_domestica	MD03G1274200.v1.1 MD11G1296600.v1.1
prunus_persica	Prupe.1G201800_v2.0.a1 Prupe.1G201800_v2.0.a1
pyrus_communis	pycom03g21860
rosa_chinensis	RchiOBHm_Chr7g0215731
rosa_laevigata	RLG00000002628 RLG00000002630
rosa_multiflora	Rmu_sc0000898.1_g000015
rosa_roxburghii	Rroxscaffold_3G00243890
rosa_rugosa	Rorug07G0156300
rosa_samantha	Rh7AG293400 Rh7BG285700 Rh7CG313600 Rh7CG313800 Rh7DG296700
rosa_wichuraiana	Rw7G024970

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	473, 626, 802
AatII	GACGTC	1 cut(s)	684
Acc36I	ACCTGC	1 cut(s)	699
AccBSI	CCGCTC	2 cut(s)	396, 413
AccI	GTMKAC	2 cut(s)	687, 841
AccII	CGCG	3 cut(s)	279, 326, 813
AccIII	TCCGGA	2 cut(s)	103, 458
AcoI	YGGCCR	2 cut(s)	204, 1269
AcuI	CTGAAG	1 cut(s)	1470
AcyI	GRCGYC	2 cut(s)	621, 681
AdeI	CACNNNGTG	1 cut(s)	607
AfaI	GTAC	5 cut(s)	116, 388, 485, 1121, 1382
AfiI	CCNNNNNNNGG	2 cut(s)	676, 701
AflIII	ACRYGT	1 cut(s)	633
AgsI	TTSAA	6 cut(s)	130, 576, 1051, 1189, 1216, 1498
AjiI	CACGTC	2 cut(s)	636, 804
AjnI	CCWGG	1 cut(s)	351
AjuI	GAANNNNNNNTTGG	2 cut(s)	1418, 1450
AluBI	AGCT	8 cut(s)	13, 317, 445, 1192, 1210, 1238, 1315, 1448
AluI	AGCT	8 cut(s)	13, 317, 445, 1192, 1210, 1238, 1315, 1448
Alw21I	GWGCWC	1 cut(s)	319
Ama87I	CYCGRG	1 cut(s)	966
Aor13HI	TCCGGA	2 cut(s)	103, 458
AoxI	GGCC	5 cut(s)	204, 526, 943, 1103, 1269
ApeKI	GCWGC	2 cut(s)	546, 1360
Asp700I	GAANNNNTTC	3 cut(s)	12, 878, 1220
AspLEI	GCGC	1 cut(s)	407
AspS9I	GGNCC	3 cut(s)	120, 187, 349
AsuHPI	GGTGA	4 cut(s)	563, 619, 913, 1027
AvaI	CYCGRG	1 cut(s)	966
AvaII	GGWCC	3 cut(s)	120, 187, 349
BaeGI	GKGCMC	1 cut(s)	1099
BaeI	ACNNNNGTAYC	2 cut(s)	1517, 1550
BanII	GRGCYC	1 cut(s)	319
BbsI	GAAGAC	3 cut(s)	349, 871, 1458
Bbv12I	GWGCWC	1 cut(s)	319
BbvI	GCAGC	2 cut(s)	533, 1347
BccI	CCATC	7 cut(s)	42, 464, 760, 950, 1156, 1282, 1408
BceAI	ACGGC	3 cut(s)	90, 191, 249
BciT130I	CCWGG	1 cut(s)	353
BciVI	GTATCC	3 cut(s)	438, 860, 1518
BfaI	CTAG	3 cut(s)	524, 1364, 1541
BfoI	RGCGCY	1 cut(s)	408
BfuAI	ACCTGC	1 cut(s)	699
BfuI	GTATCC	3 cut(s)	438, 860, 1518
BglI	GCCNNNNNGGC	1 cut(s)	173
BglII	AGATCT	1 cut(s)	517
BisI	GCNGC	4 cut(s)	168, 327, 547, 1361
BlsI	GCNGC	4 cut(s)	169, 328, 548, 1362
BmcAI	AGTACT	1 cut(s)	485
Bme1390I	CCNGG	1 cut(s)	353
Bme18I	GGWCC	3 cut(s)	120, 187, 349
BmeT110I	CYCGRG	1 cut(s)	966
BmgBI	CACGTC	2 cut(s)	636, 804
BmgT120I	GGNCC	3 cut(s)	120, 187, 349
BmiI	GGNNCC	1 cut(s)	961
BmrFI	CCNGG	1 cut(s)	353
BmrI	ACTGGG	2 cut(s)	496, 665
BmuI	ACTGGG	2 cut(s)	496, 665
BpiI	GAAGAC	3 cut(s)	349, 871, 1458
BpmI	CTGGAG	1 cut(s)	1078
BsaAI	YACGTR	1 cut(s)	1110
BsaHI	GRCGYC	2 cut(s)	621, 681
BsaI	GGTCTC	2 cut(s)	460, 1249
BsaJI	CCNNGG	3 cut(s)	201, 661, 777
BsaWI	WCCGGW	5 cut(s)	103, 184, 341, 458, 698
BsaXI	ACNNNNNCTCC	8 cut(s)	107, 137, 182, 212, 440, 470, 492, 522
Bsc4I	CCNNNNNNNGG	2 cut(s)	676, 701
Bse118I	RCCGGY	2 cut(s)	1001, 1267
Bse1I	ACTGG	4 cut(s)	122, 431, 491, 671
BseAI	TCCGGA	2 cut(s)	103, 458
BseBI	CCWGG	1 cut(s)	353
BseDI	CCNNGG	3 cut(s)	201, 661, 777
BseGI	GGATG	3 cut(s)	496, 1084, 1148
BseLI	CCNNNNNNNGG	2 cut(s)	676, 701
BseMII	CTCAG	4 cut(s)	528, 825, 1091, 1501
BseNI	ACTGG	4 cut(s)	122, 431, 491, 671
BseRI	GAGGAG	6 cut(s)	148, 247, 280, 918, 1271, 1321
BseSI	GKGCMC	1 cut(s)	1099
BseXI	GCAGC	2 cut(s)	533, 1347
BsgI	GTGCAG	2 cut(s)	1369, 1412
Bsh1236I	CGCG	3 cut(s)	279, 326, 813
BshFI	GGCC	5 cut(s)	206, 528, 945, 1105, 1271
BsiHKAI	GWGCWC	1 cut(s)	319
BsiHKCI	CYCGRG	1 cut(s)	966
BsiSI	CCGG	8 cut(s)	104, 185, 342, 459, 498, 699, 1002, 1268
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	2 cut(s)	676, 701
BsmBI	CGTCTC	4 cut(s)	160, 232, 810, 1433
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	1 cut(s)	1362
BsnI	GGCC	5 cut(s)	206, 528, 945, 1105, 1271
Bso31I	GGTCTC	2 cut(s)	460, 1249
BsoBI	CYCGRG	1 cut(s)	966
Bsp1286I	GDGCHC	2 cut(s)	319, 1099
Bsp13I	TCCGGA	2 cut(s)	103, 458
Bsp143I	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
Bsp19I	CCATGG	1 cut(s)	777
BspANI	GGCC	5 cut(s)	206, 528, 945, 1105, 1271
BspCNI	CTCAG	4 cut(s)	527, 826, 1092, 1500
BspEI	TCCGGA	2 cut(s)	103, 458
BspFNI	CGCG	3 cut(s)	279, 326, 813
BspLI	GGNNCC	1 cut(s)	961
BspMI	ACCTGC	1 cut(s)	699
BspQI	GCTCTTC	1 cut(s)	3
BspTNI	GGTCTC	2 cut(s)	460, 1249
BsrBI	CCGCTC	2 cut(s)	396, 413
BsrFI	RCCGGY	2 cut(s)	1001, 1267
BsrI	ACTGG	4 cut(s)	122, 431, 491, 671
BssAI	RCCGGY	2 cut(s)	1001, 1267
BssECI	CCNNGG	3 cut(s)	201, 661, 777
BssMI	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
BssNAI	GTATAC	1 cut(s)	688
BssNI	GRCGYC	2 cut(s)	621, 681
BssT1I	CCWWGG	2 cut(s)	201, 777
Bst1107I	GTATAC	1 cut(s)	688
Bst2UI	CCWGG	1 cut(s)	353
Bst4CI	ACNGT	6 cut(s)	226, 508, 607, 799, 1390, 1533
Bst6I	CTCTTC	3 cut(s)	3, 1493, 1542
BstACI	GRCGYC	2 cut(s)	621, 681
BstBAI	YACGTR	1 cut(s)	1110
BstC8I	GCNNGC	2 cut(s)	331, 560
BstDEI	CTNAG	4 cut(s)	514, 834, 1100, 1487
BstDSI	CCRYGG	2 cut(s)	661, 777
BstF5I	GGATG	3 cut(s)	496, 1084, 1148
BstFNI	CGCG	3 cut(s)	279, 326, 813
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	1 cut(s)	407
BstKTI	GATC	6 cut(s)	337, 520, 601, 657, 711, 753
BstMBI	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
BstMWI	GCNNNNNNNGC	5 cut(s)	173, 218, 323, 402, 555
BstNI	CCWGG	1 cut(s)	353
BstNSI	RCATGY	1 cut(s)	333
BstSCI	CCNGG	1 cut(s)	351
BstSLI	GKGCMC	1 cut(s)	1099
BstSNI	TACGTA	1 cut(s)	1110
BstUI	CGCG	3 cut(s)	279, 326, 813
BstV1I	GCAGC	2 cut(s)	533, 1347
BstV2I	GAAGAC	3 cut(s)	349, 871, 1458
BstX2I	RGATCY	1 cut(s)	517
BstXI	CCANNNNNNTGG	1 cut(s)	1279
BstYI	RGATCY	1 cut(s)	517
BstZ17I	GTATAC	1 cut(s)	688
BsuI	GTATCC	3 cut(s)	438, 860, 1518
BsuRI	GGCC	5 cut(s)	206, 528, 945, 1105, 1271
BtgI	CCRYGG	2 cut(s)	661, 777
BtgZI	GCGATG	2 cut(s)	294, 1086
BtrI	CACGTC	2 cut(s)	636, 804
BtsCI	GGATG	3 cut(s)	496, 1084, 1148
BtsI	GCAGTG	1 cut(s)	1290
BtsIMutI	CAGTG	4 cut(s)	678, 1097, 1290, 1386
BveI	ACCTGC	1 cut(s)	699
Cac8I	GCNNGC	2 cut(s)	331, 560
CfoI	GCGC	1 cut(s)	407
Cfr10I	RCCGGY	2 cut(s)	1001, 1267
Cfr13I	GGNCC	3 cut(s)	120, 187, 349
CseI	GACGC	2 cut(s)	629, 721
Csp6I	GTAC	5 cut(s)	115, 387, 484, 1120, 1381
CviAII	CATG	5 cut(s)	330, 778, 871, 934, 991
CviQI	GTAC	5 cut(s)	115, 387, 484, 1120, 1381
DdeI	CTNAG	4 cut(s)	514, 834, 1100, 1487
DpnI	GATC	6 cut(s)	336, 519, 600, 656, 710, 752
DpnII	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
DraI	TTTAAA	1 cut(s)	1477
DraIII	CACNNNGTG	1 cut(s)	607
DrdI	GACNNNNNNGTC	3 cut(s)	473, 626, 802
DseDI	GACNNNNNNGTC	3 cut(s)	473, 626, 802
EaeI	YGGCCR	2 cut(s)	204, 1269
Eam1104I	CTCTTC	3 cut(s)	3, 1493, 1542
EarI	CTCTTC	3 cut(s)	3, 1493, 1542
EciI	GGCGGA	1 cut(s)	208
Ecl136II	GAGCTC	1 cut(s)	317
Eco105I	TACGTA	1 cut(s)	1110
Eco130I	CCWWGG	2 cut(s)	201, 777
Eco147I	AGGCCT	1 cut(s)	1105
Eco24I	GRGCYC	1 cut(s)	319
Eco31I	GGTCTC	2 cut(s)	460, 1249
Eco47I	GGWCC	3 cut(s)	120, 187, 349
Eco53kI	GAGCTC	1 cut(s)	317
Eco57I	CTGAAG	1 cut(s)	1470
Eco88I	CYCGRG	1 cut(s)	966
EcoICRI	GAGCTC	1 cut(s)	317
EcoRII	CCWGG	1 cut(s)	351
EcoT14I	CCWWGG	2 cut(s)	201, 777
EcoT38I	GRGCYC	1 cut(s)	319
ErhI	CCWWGG	2 cut(s)	201, 777
Esp3I	CGTCTC	4 cut(s)	160, 232, 810, 1433
FaeI	CATG	5 cut(s)	333, 781, 874, 937, 994
FalI	AAGNNNNNCTT	2 cut(s)	434, 466
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	5 cut(s)	329, 777, 870, 933, 990
FauI	CCCGC	4 cut(s)	269, 418, 752, 1573
FblI	GTMKAC	2 cut(s)	687, 841
Fnu4HI	GCNGC	4 cut(s)	168, 327, 547, 1361
FokI	GGATG	3 cut(s)	503, 1091, 1135
FriOI	GRGCYC	1 cut(s)	319
Fsp4HI	GCNGC	4 cut(s)	168, 327, 547, 1361
FspBI	CTAG	3 cut(s)	524, 1364, 1541
GlaI	GCGC	1 cut(s)	406
GluI	GCNGC	4 cut(s)	168, 327, 547, 1361
GsuI	CTGGAG	1 cut(s)	1078
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	5 cut(s)	206, 528, 945, 1105, 1271
HapII	CCGG	8 cut(s)	104, 185, 342, 459, 498, 699, 1002, 1268
HgaI	GACGC	2 cut(s)	629, 721
HhaI	GCGC	1 cut(s)	407
Hin1I	GRCGYC	2 cut(s)	621, 681
Hin1II	CATG	5 cut(s)	333, 781, 874, 937, 994
Hin6I	GCGC	1 cut(s)	405
HinP1I	GCGC	1 cut(s)	405
HincII	GTYRAC	2 cut(s)	568, 842
HindII	GTYRAC	2 cut(s)	568, 842
HpaII	CCGG	8 cut(s)	104, 185, 342, 459, 498, 699, 1002, 1268
HphI	GGTGA	4 cut(s)	563, 619, 913, 1027
Hpy166II	GTNNAC	5 cut(s)	190, 568, 631, 688, 842
Hpy188I	TCNGA	7 cut(s)	91, 97, 310, 517, 755, 977, 1065
Hpy8I	GTNNAC	5 cut(s)	190, 568, 631, 688, 842
Hpy99I	CGWCG	4 cut(s)	212, 314, 470, 686
HpyAV	CCTTC	8 cut(s)	136, 283, 604, 705, 1006, 1086, 1337, 1423
HpyCH4III	ACNGT	6 cut(s)	226, 508, 607, 799, 1390, 1533
HpyCH4IV	ACGT	4 cut(s)	635, 681, 803, 1109
HpyCH4V	TGCA	2 cut(s)	1386, 1393
HpyF10VI	GCNNNNNNNGC	5 cut(s)	173, 218, 323, 402, 555
HpyF3I	CTNAG	4 cut(s)	514, 834, 1100, 1487
HpySE526I	ACGT	4 cut(s)	635, 681, 803, 1109
Hsp92I	GRCGYC	2 cut(s)	621, 681
Hsp92II	CATG	5 cut(s)	333, 781, 874, 937, 994
HspAI	GCGC	1 cut(s)	405
Kpn2I	TCCGGA	2 cut(s)	103, 458
Kzo9I	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
LguI	GCTCTTC	1 cut(s)	3
LmnI	GCTCC	7 cut(s)	314, 401, 450, 500, 779, 931, 1567
Lsp1109I	GCAGC	2 cut(s)	533, 1347
MaeI	CTAG	3 cut(s)	524, 1364, 1541
MaeII	ACGT	4 cut(s)	635, 681, 803, 1109
MaeIII	GTNAC	4 cut(s)	583, 785, 799, 901
MalI	GATC	6 cut(s)	336, 519, 600, 656, 710, 752
MbiI	CCGCTC	2 cut(s)	396, 413
MboI	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
MfeI	CAATTG	1 cut(s)	640
MflI	RGATCY	1 cut(s)	517
MhlI	GDGCHC	2 cut(s)	319, 1099
MluCI	AATT	3 cut(s)	640, 1295, 1575
MlyI	GAGTC	7 cut(s)	94, 483, 636, 660, 793, 847, 1069
MmeI	TCCRAC	3 cut(s)	333, 1009, 1233
MroI	TCCGGA	2 cut(s)	103, 458
MroXI	GAANNNNTTC	3 cut(s)	12, 878, 1220
MseI	TTAA	2 cut(s)	1476, 1509
MspA1I	CMGCKG	2 cut(s)	546, 719
MspI	CCGG	8 cut(s)	104, 185, 342, 459, 498, 699, 1002, 1268
MspR9I	CCNGG	1 cut(s)	353
MunI	CAATTG	1 cut(s)	640
Mva1269I	GAATGC	1 cut(s)	1362
MvaI	CCWGG	1 cut(s)	353
MvnI	CGCG	3 cut(s)	279, 326, 813
MwoI	GCNNNNNNNGC	5 cut(s)	173, 218, 323, 402, 555
NcoI	CCATGG	1 cut(s)	777
NdeII	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
NlaIII	CATG	5 cut(s)	333, 781, 874, 937, 994
NlaIV	GGNNCC	1 cut(s)	961
NmeAIII	GCCGAG	1 cut(s)	676
NmuCI	GTSAC	3 cut(s)	785, 799, 901
NspI	RCATGY	1 cut(s)	333
PaeI	GCATGC	1 cut(s)	333
PceI	AGGCCT	1 cut(s)	1105
PciSI	GCTCTTC	1 cut(s)	3
PcsI	WCGNNNNNNNCGW	3 cut(s)	159, 330, 474
PctI	GAATGC	1 cut(s)	1362
PdmI	GAANNNNTTC	3 cut(s)	12, 878, 1220
PfeI	GAWTC	7 cut(s)	92, 107, 417, 572, 827, 1051, 1546
PkrI	GCNGC	4 cut(s)	169, 328, 548, 1362
PleI	GAGTC	7 cut(s)	94, 482, 635, 660, 792, 846, 1068
PpsI	GAGTC	7 cut(s)	94, 482, 635, 660, 792, 846, 1068
Ppu21I	YACGTR	1 cut(s)	1110
Psp124BI	GAGCTC	1 cut(s)	319
Psp6I	CCWGG	1 cut(s)	351
PspGI	CCWGG	1 cut(s)	351
PspN4I	GGNNCC	1 cut(s)	961
PspPI	GGNCC	3 cut(s)	120, 187, 349
PsuI	RGATCY	1 cut(s)	517
RsaI	GTAC	5 cut(s)	116, 388, 485, 1121, 1382
RsaNI	GTAC	5 cut(s)	115, 387, 484, 1120, 1381
SacI	GAGCTC	1 cut(s)	319
SalI	GTCGAC	1 cut(s)	840
SapI	GCTCTTC	1 cut(s)	3
SaqAI	TTAA	2 cut(s)	1476, 1509
SatI	GCNGC	4 cut(s)	168, 327, 547, 1361
Sau3AI	GATC	6 cut(s)	334, 517, 598, 654, 708, 750
Sau96I	GGNCC	3 cut(s)	120, 187, 349
ScaI	AGTACT	1 cut(s)	485
SchI	GAGTC	7 cut(s)	94, 483, 636, 660, 793, 847, 1069
ScrFI	CCNGG	1 cut(s)	353
SduI	GDGCHC	2 cut(s)	319, 1099
SinI	GGWCC	3 cut(s)	120, 187, 349
SnaBI	TACGTA	1 cut(s)	1110
SphI	GCATGC	1 cut(s)	333
Sse9I	AATT	3 cut(s)	640, 1295, 1575
SseBI	AGGCCT	1 cut(s)	1105
SspMI	CTAG	3 cut(s)	524, 1364, 1541
SstI	GAGCTC	1 cut(s)	319
StuI	AGGCCT	1 cut(s)	1105
StyD4I	CCNGG	1 cut(s)	351
StyI	CCWWGG	2 cut(s)	201, 777
TaaI	ACNGT	6 cut(s)	226, 508, 607, 799, 1390, 1533
TaiI	ACGT	4 cut(s)	638, 684, 806, 1112
TaqI	TCGA	6 cut(s)	110, 360, 415, 841, 882, 1331
TasI	AATT	3 cut(s)	640, 1295, 1575
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	2 cut(s)	170, 329
TfiI	GAWTC	7 cut(s)	92, 107, 417, 572, 827, 1051, 1546
Tru1I	TTAA	2 cut(s)	1476, 1509
Tru9I	TTAA	2 cut(s)	1476, 1509
TscAI	CASTG	4 cut(s)	678, 1104, 1290, 1393
TseFI	GTSAC	3 cut(s)	785, 799, 901
TseI	GCWGC	2 cut(s)	546, 1360
Tsp45I	GTSAC	3 cut(s)	785, 799, 901
TspDTI	ATGAA	2 cut(s)	887, 1334
TspGWI	ACGGA	7 cut(s)	151, 283, 293, 327, 374, 678, 879
TspRI	CASTG	4 cut(s)	678, 1104, 1290, 1393
VpaK11BI	GGWCC	3 cut(s)	120, 187, 349
XbaI	TCTAGA	1 cut(s)	1540
XceI	RCATGY	1 cut(s)	333
XmiI	GTMKAC	2 cut(s)	687, 841
XmnI	GAANNNNTTC	3 cut(s)	12, 878, 1220
XspI	CTAG	3 cut(s)	524, 1364, 1541
ZraI	GACGTC	1 cut(s)	682
ZrmI	AGTACT	1 cut(s)	485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.