Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0012137

Physical Location & Seq

Genomic Coordinates Forward (+)

41419001 .. 41420650

Gene Structure 1650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1296600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGCGGAACCACAAATCTCCAAGACCTTCCCTGTGAAACCCAAGCACAAGCCTAAGCCCCGAACTCCCAAACAATCCTCCGAATCCAAATACTGGTCCTCCTTCAAAACCAAGCAAATCCCTGACCTCATCTCCGCCATCACCTCCCTCACCTTCTCCCCCAACGCCCCACACTCTTTCGCCGCCGCCCACTCCGCCTCCCTCACTCTCTACAACCCCCTAAACCAATTCTCCCCCACCGCCACCATCTCCGCCTTCCGCGACGTCGTTTCTTCAGCCTCATTCCGCTGCGATGGCCTCCTCGTCGCCGCCGCCGACCTCTCTGGCCTCGTCCAGGTCTTCGATGTCAAAACCCGAAACCCGCTTCGGAAACTTAAATCCCACACGCGCCCAGCTCGGTTCGTCAAATACCCAGCTTCTGACAAGCTCCATTTGGTCTCCGGCGGCGACGATGCCATTGTCAAGTACTGGGACGTCGCCGGCGAGACTCCGATTTCCGACTTGCTCGGCCACAAGGACTACGTGCGGTGCGGGGATTGCTCGCCGGTCAGTTCGGATATGTTTGTTACTGGGTCTTATGATCACACGGTGAAGCTTTGGGATGTGAGGGTTAGAGATTCGGGGTCGGTGATGGAGGTGAATCACGGAAAGCCGGTGGAGGACGTGATTTTCTTGCCATCCGGTGGGTTAATTGCGACGGCTGGCGGCGATTCCGTGAAGATATGGGATTTGATGGCAGGTGGGAAAATGGTGTATTCGATGGAGAGCCACAATAAGACTGTGACTTCGATTTGCGTCGCGAAAATCGGAAAGGATAGCGGGGAGGAGGCGCAGCAATACAGGATTTTGAGTGTGGCATTGGATGGTTACATGAAGGTGTTTGATTATGCAAAGATGAAGGTCACTCACTCAATGCGGTTCCCTGCGCCGCTAATGTCGGTAGGGTTTTCGCCCGATTGTATGACGAGGGTGATTGGAACTTCGAACGGGATGATCTACGCTGGGAGGAGGAAGTACAAGGAAGGCGCAGGGGGTGGTTCTGATGAGGAGCTAGATAGGCCGCTTTCGAAGTATGAGAAGAGGGAGAAAAGGTTGAAGGCCTTAGGGGATGCTGGGGGTTTGGGACCTGTGATGGAGGAACCGCAGATTCGGGTTTTAAGGCCTTCGAATTTTCGGTATTTCCATAGAGGGCAAGGGGAGAAGCCGTCCGAGCGGGACTATGTGGTAATGAGGCCAAAGAAAGTGAAATTGGCCGAGCATGACAAGCTATTGAAGAAGTTTAGGCACAAGGATGCTCTGGTGTCTGTCTTGCGCGGCAAGAATCCGGAGAATGCCGTGGCGGTGATGGAGGAATTGGTGGCGAGGAATAAACTGCTGAAATGCGTGTTGAATTTGGATTCGGAGGAGCTGGAATTGCTGCTCAAGTTCTTGCAGAAGCACTTGACCGTGCCAAGTTACTCGGGGTTGTTGATGGGGTTGACAAAGAAGGTTCTTGAGATGAGGACTGAGGACATTAAAGCTTCCGAAGCGTTGAAGGGCCATATTCGAAACCTTAAACGGTCTGTTGAGGAGGAAATTCGGATACAACAGTCGTTGCAGGAGATGCAGGGTATAATTTCTCCTCTGTTGAGAATTACTGGAAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009561 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

UTP15_C WD40

Protein Analysis

550

Amino Acids

61.05

Weight (kDa)

9.52

Isoelectric Point (pI)

45.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	44 - 158	2.3e-09	Prp19 WD40 domain
WDR55	PF24796	45 - 176	1.6e-07	WDR55
Beta-prop_WDR3_1st	PF25173	45 - 202	1.8e-16	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	46 - 141	1.9e-06	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	58 - 264	7.9e-17	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	85 - 264	1.6e-27	WDR5 beta-propeller domain
Beta-prop_EML	PF23409	86 - 265	2.3e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta	PF25391	90 - 271	2.7e-12	G protein beta WD-40 repeat protein
Beta-prop_EIPR1	PF23609	102 - 200	1.7e-08	EIPR1 beta-propeller
Beta-prop_WDR41	PF25178	106 - 243	1.4e-06	WDR41
Beta-prop_TEP1_2nd	PF25047	123 - 294	9.7e-11	TEP-1 second beta-propeller
WD40_Prp19	PF24814	124 - 334	1.2e-16	Prp19 WD40 domain
EIF3I	PF24805	124 - 233	5e-07	EIF3I
Beta-prop_THOC3	PF25174	142 - 244	1.2e-13	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	167 - 271	1.5e-07	WDR3 second beta-propeller domain
WDR55	PF24796	190 - 333	5.5e-07	WDR55
Beta-prop_WDR3_1st	PF25173	214 - 328	6.1e-06	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	215 - 332	1.5e-07	THOC3 beta-propeller domain
UTP15_C	PF09384	400 - 542	1.3e-38	UTP15 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47990
fragaria_vesca	FvH4_5g25500
malus_domestica	MD03G1274200.v1.1 MD11G1296600.v1.1
prunus_persica	Prupe.1G201800_v2.0.a1 Prupe.1G201800_v2.0.a1
pyrus_communis	pycom03g21860
rosa_chinensis	RchiOBHm_Chr7g0215731
rosa_laevigata	RLG00000002628 RLG00000002630
rosa_multiflora	Rmu_sc0000898.1_g000015
rosa_roxburghii	Rroxscaffold_3G00243890
rosa_rugosa	Rorug07G0156300
rosa_samantha	Rh7AG293400 Rh7BG285700 Rh7CG313600 Rh7CG313800 Rh7DG296700
rosa_wichuraiana	Rw7G024970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	728
AatII	GACGTC	2 cut(s)	267, 477
Acc36I	ACCTGC	1 cut(s)	728
AccB7I	CCANNNNNTGG	2 cut(s)	93, 683
AccBSI	CCGCTC	1 cut(s)	1213
AccII	CGCG	4 cut(s)	261, 388, 800, 1314
AccIII	TCCGGA	1 cut(s)	1324
AcoI	YGGCCR	2 cut(s)	508, 1251
AcsI	RAATTY	3 cut(s)	1168, 1390, 1575
AcuI	CTGAAG	1 cut(s)	258
AcyI	GRCGYC	2 cut(s)	264, 474
AdeI	CACNNNGTG	1 cut(s)	589
AfaI	GTAC	2 cut(s)	467, 1016
AfiI	CCNNNNNNNGG	3 cut(s)	93, 334, 683
AgsI	TTSAA	5 cut(s)	106, 1096, 1273, 1390, 1534
AjiI	CACGTC	1 cut(s)	664
AjnI	CCWGG	1 cut(s)	333
AjuI	GAANNNNNNNTTGG	2 cut(s)	1232, 1264
AluBI	AGCT	8 cut(s)	395, 416, 427, 595, 1051, 1267, 1408, 1520
AluI	AGCT	8 cut(s)	395, 416, 427, 595, 1051, 1267, 1408, 1520
Alw26I	GTCTC	2 cut(s)	442, 479
AlwNI	CAGNNNCTG	1 cut(s)	419
Ama87I	CYCGRG	1 cut(s)	1459
Aor13HI	TCCGGA	1 cut(s)	1324
AoxI	GGCC	9 cut(s)	295, 325, 508, 1058, 1098, 1160, 1232, 1251, 1537
ApeKI	GCWGC	3 cut(s)	288, 832, 1417
ApoI	RAATTY	3 cut(s)	1168, 1390, 1575
ArsI	GACNNNNNNTTYG	2 cut(s)	769, 801
AspLEI	GCGC	5 cut(s)	390, 832, 928, 1028, 1314
AspS9I	GGNCC	3 cut(s)	96, 1124, 1537
AsuHPI	GGTGA	7 cut(s)	133, 142, 601, 640, 649, 982, 1354
AsuII	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
AvaI	CYCGRG	1 cut(s)	1459
AvaII	GGWCC	2 cut(s)	96, 1124
AxyI	CCTNAGG	1 cut(s)	1102
BaeI	ACNNNNGTAYC	2 cut(s)	1574, 1607
BbsI	GAAGAC	1 cut(s)	331
BbvI	GCAGC	3 cut(s)	275, 844, 1404
BceAI	ACGGC	3 cut(s)	714, 1189, 1319
BciT130I	CCWGG	1 cut(s)	335
BciVI	GTATCC	1 cut(s)	1575
BclI	TGATCA	1 cut(s)	580
BcoDI	GTCTC	2 cut(s)	442, 479
BfaI	CTAG	1 cut(s)	1052
BfuAI	ACCTGC	1 cut(s)	728
BfuI	GTATCC	1 cut(s)	1575
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	1 cut(s)	335
Bme18I	GGWCC	2 cut(s)	96, 1124
BmeT110I	CYCGRG	1 cut(s)	1459
BmgBI	CACGTC	1 cut(s)	664
BmgT120I	GGNCC	3 cut(s)	96, 1124, 1537
BmiI	GGNNCC	4 cut(s)	9, 920, 1125, 1140
BmrFI	CCNGG	1 cut(s)	335
BmrI	ACTGGG	2 cut(s)	478, 579
BmsI	GCATC	4 cut(s)	442, 1099, 1282, 1593
BmuI	ACTGGG	2 cut(s)	478, 579
BpiI	GAAGAC	1 cut(s)	331
Bpu10I	CCTNAGC	1 cut(s)	54
Bpu14I	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
BpuEI	CTTGAG	2 cut(s)	1406, 1514
BsaAI	YACGTR	1 cut(s)	523
BsaHI	GRCGYC	2 cut(s)	264, 474
BsaI	GGTCTC	1 cut(s)	442
BsaJI	CCNNGG	1 cut(s)	1335
BsaWI	WCCGGW	2 cut(s)	680, 1324
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 334, 683
Bse118I	RCCGGY	3 cut(s)	479, 544, 652
Bse1I	ACTGG	4 cut(s)	98, 473, 574, 1642
Bse21I	CCTNAGG	1 cut(s)	1102
BseAI	TCCGGA	1 cut(s)	1324
BseBI	CCWGG	1 cut(s)	335
BseDI	CCNNGG	1 cut(s)	1335
BseGI	GGATG	6 cut(s)	607, 677, 868, 996, 1114, 1297
BseLI	CCNNNNNNNGG	3 cut(s)	93, 334, 683
BseMII	CTCAG	1 cut(s)	1497
BseNI	ACTGG	4 cut(s)	98, 473, 574, 1642
BseRI	GAGGAG	7 cut(s)	290, 839, 1021, 1061, 1418, 1583, 1611
BseXI	GCAGC	3 cut(s)	275, 844, 1404
BseYI	CCCAGC	4 cut(s)	391, 412, 1001, 1112
Bsh1236I	CGCG	4 cut(s)	261, 388, 800, 1314
BshFI	GGCC	9 cut(s)	297, 327, 510, 1060, 1100, 1162, 1234, 1253, 1539
BsiHKCI	CYCGRG	1 cut(s)	1459
BsiSI	CCGG	6 cut(s)	441, 480, 545, 653, 681, 1325
BslFI	GGGAC	3 cut(s)	485, 1137, 1229
BslI	CCNNNNNNNGG	3 cut(s)	93, 334, 683
BsmAI	GTCTC	2 cut(s)	442, 479
BsmFI	GGGAC	3 cut(s)	485, 1137, 1229
BsmI	GAATGC	1 cut(s)	1336
BsnI	GGCC	9 cut(s)	297, 327, 510, 1060, 1100, 1162, 1234, 1253, 1539
Bso31I	GGTCTC	1 cut(s)	442
BsoBI	CYCGRG	1 cut(s)	1459
Bsp119I	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
Bsp13I	TCCGGA	1 cut(s)	1324
Bsp143I	GATC	2 cut(s)	580, 993
Bsp68I	TCGCGA	1 cut(s)	800
BspANI	GGCC	9 cut(s)	297, 327, 510, 1060, 1100, 1162, 1234, 1253, 1539
BspCNI	CTCAG	1 cut(s)	1498
BspEI	TCCGGA	1 cut(s)	1324
BspFNI	CGCG	4 cut(s)	261, 388, 800, 1314
BspLI	GGNNCC	4 cut(s)	9, 920, 1125, 1140
BspMI	ACCTGC	1 cut(s)	728
BspT104I	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
BspTNI	GGTCTC	1 cut(s)	442
BsrBI	CCGCTC	1 cut(s)	1213
BsrFI	RCCGGY	3 cut(s)	479, 544, 652
BsrI	ACTGG	4 cut(s)	98, 473, 574, 1642
BssAI	RCCGGY	3 cut(s)	479, 544, 652
BssECI	CCNNGG	1 cut(s)	1335
BssMI	GATC	2 cut(s)	580, 993
BssNI	GRCGYC	2 cut(s)	264, 474
Bst2UI	CCWGG	1 cut(s)	335
Bst4CI	ACNGT	5 cut(s)	589, 781, 1447, 1560, 1590
Bst6I	CTCTTC	1 cut(s)	1073
BstACI	GRCGYC	2 cut(s)	264, 474
BstAPI	GCANNNNNTGC	1 cut(s)	1603
BstBAI	YACGTR	1 cut(s)	523
BstBI	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
BstC8I	GCNNGC	3 cut(s)	481, 542, 703
BstDEI	CTNAG	3 cut(s)	54, 1102, 1506
BstDSI	CCRYGG	1 cut(s)	1335
BstENI	CCTNNNNNAGG	1 cut(s)	332
BstF5I	GGATG	6 cut(s)	607, 677, 868, 996, 1114, 1297
BstFNI	CGCG	4 cut(s)	261, 388, 800, 1314
BstHHI	GCGC	5 cut(s)	390, 832, 928, 1028, 1314
BstKTI	GATC	2 cut(s)	583, 996
BstMAI	GTCTC	2 cut(s)	442, 479
BstMBI	GATC	2 cut(s)	580, 993
BstMWI	GCNNNNNNNGC	9 cut(s)	194, 294, 537, 1057, 1210, 1264, 1414, 1526, 1603
BstNI	CCWGG	1 cut(s)	335
BstSCI	CCNGG	1 cut(s)	333
BstUI	CGCG	4 cut(s)	261, 388, 800, 1314
BstV1I	GCAGC	3 cut(s)	275, 844, 1404
BstV2I	GAAGAC	1 cut(s)	331
Bsu36I	CCTNAGG	1 cut(s)	1102
BsuI	GTATCC	1 cut(s)	1575
BsuRI	GGCC	9 cut(s)	297, 327, 510, 1060, 1100, 1162, 1234, 1253, 1539
BtgI	CCRYGG	1 cut(s)	1335
BtgZI	GCGATG	1 cut(s)	306
BtrI	CACGTC	1 cut(s)	664
BtsCI	GGATG	6 cut(s)	607, 677, 868, 996, 1114, 1297
BtuMI	TCGCGA	1 cut(s)	800
BveI	ACCTGC	1 cut(s)	728
Cac8I	GCNNGC	3 cut(s)	481, 542, 703
CaiI	CAGNNNCTG	1 cut(s)	419
CfoI	GCGC	5 cut(s)	390, 832, 928, 1028, 1314
Cfr10I	RCCGGY	3 cut(s)	479, 544, 652
Cfr13I	GGNCC	3 cut(s)	96, 1124, 1537
CseI	GACGC	1 cut(s)	784
Csp6I	GTAC	2 cut(s)	466, 1015
CviAII	CATG	2 cut(s)	871, 1259
CviQI	GTAC	2 cut(s)	466, 1015
DdeI	CTNAG	3 cut(s)	54, 1102, 1506
DpnI	GATC	2 cut(s)	582, 995
DpnII	GATC	2 cut(s)	580, 993
DraIII	CACNNNGTG	1 cut(s)	589
EaeI	YGGCCR	2 cut(s)	508, 1251
Eam1104I	CTCTTC	1 cut(s)	1073
EarI	CTCTTC	1 cut(s)	1073
EciI	GGCGGA	4 cut(s)	20, 124, 184, 241
Eco147I	AGGCCT	2 cut(s)	1100, 1162
Eco31I	GGTCTC	1 cut(s)	442
Eco47I	GGWCC	2 cut(s)	96, 1124
Eco57I	CTGAAG	1 cut(s)	258
Eco81I	CCTNAGG	1 cut(s)	1102
Eco88I	CYCGRG	1 cut(s)	1459
EcoNI	CCTNNNNNAGG	1 cut(s)	332
EcoO109I	RGGNCCY	1 cut(s)	1124
EcoRII	CCWGG	1 cut(s)	333
FaeI	CATG	2 cut(s)	874, 1262
FaqI	GGGAC	3 cut(s)	485, 1137, 1229
FatI	CATG	2 cut(s)	870, 1258
FauI	CCCGC	4 cut(s)	369, 524, 812, 1206
FbaI	TGATCA	1 cut(s)	580
FokI	GGATG	6 cut(s)	614, 664, 875, 1003, 1121, 1304
FspBI	CTAG	1 cut(s)	1052
GlaI	GCGC	5 cut(s)	389, 831, 927, 1027, 1313
GsaI	CCCAGC	4 cut(s)	395, 416, 1005, 1116
HaeIII	GGCC	9 cut(s)	297, 327, 510, 1060, 1100, 1162, 1234, 1253, 1539
HapII	CCGG	6 cut(s)	441, 480, 545, 653, 681, 1325
HgaI	GACGC	1 cut(s)	784
HhaI	GCGC	5 cut(s)	390, 832, 928, 1028, 1314
Hin1I	GRCGYC	2 cut(s)	264, 474
Hin1II	CATG	2 cut(s)	874, 1262
Hin6I	GCGC	5 cut(s)	388, 830, 926, 1026, 1312
HinP1I	GCGC	5 cut(s)	388, 830, 926, 1026, 1312
HincII	GTYRAC	1 cut(s)	1479
HindII	GTYRAC	1 cut(s)	1479
HindIII	AAGCTT	2 cut(s)	593, 1518
HinfI	GANTC	8 cut(s)	83, 487, 617, 640, 710, 1147, 1321, 1397
HpaII	CCGG	6 cut(s)	441, 480, 545, 653, 681, 1325
HphI	GGTGA	7 cut(s)	133, 142, 601, 640, 649, 982, 1354
Hpy166II	GTNNAC	1 cut(s)	1479
Hpy188III	TCNNGA	3 cut(s)	799, 1325, 1493
Hpy8I	GTNNAC	1 cut(s)	1479
Hpy99I	CGWCG	7 cut(s)	266, 269, 308, 452, 479, 700, 800
HpyCH4III	ACNGT	5 cut(s)	589, 781, 1447, 1560, 1590
HpyCH4IV	ACGT	4 cut(s)	264, 474, 522, 663
HpyCH4V	TGCA	4 cut(s)	890, 1432, 1597, 1606
HpyF10VI	GCNNNNNNNGC	9 cut(s)	194, 294, 537, 1057, 1210, 1264, 1414, 1526, 1603
HpyF3I	CTNAG	3 cut(s)	54, 1102, 1506
HpySE526I	ACGT	4 cut(s)	264, 474, 522, 663
Hsp92I	GRCGYC	2 cut(s)	264, 474
Hsp92II	CATG	2 cut(s)	874, 1262
HspAI	GCGC	5 cut(s)	388, 830, 926, 1026, 1312
Kpn2I	TCCGGA	1 cut(s)	1324
KroI	GCCGGC	1 cut(s)	479
KroNI	GCCGGC	1 cut(s)	481
Ksp22I	TGATCA	1 cut(s)	580
Kzo9I	GATC	2 cut(s)	580, 993
LmnI	GCTCC	3 cut(s)	432, 1048, 1405
Lsp1109I	GCAGC	3 cut(s)	275, 844, 1404
LweI	GCATC	4 cut(s)	442, 1099, 1282, 1593
MaeI	CTAG	1 cut(s)	1052
MaeII	ACGT	4 cut(s)	264, 474, 522, 663
MaeIII	GTNAC	5 cut(s)	565, 781, 866, 901, 1454
MalI	GATC	2 cut(s)	582, 995
MbiI	CCGCTC	1 cut(s)	1213
MboI	GATC	2 cut(s)	580, 993
MboII	GAAGA	5 cut(s)	264, 331, 730, 1090, 1285
MlyI	GAGTC	1 cut(s)	481
MmeI	TCCRAC	1 cut(s)	522
MreI	CGCCGGCG	1 cut(s)	479
MroI	TCCGGA	1 cut(s)	1324
MroNI	GCCGGC	1 cut(s)	479
MseI	TTAA	5 cut(s)	375, 689, 1157, 1515, 1554
MslI	CAYNNNNRTG	2 cut(s)	875, 1290
MspA1I	CMGCKG	1 cut(s)	288
MspI	CCGG	6 cut(s)	441, 480, 545, 653, 681, 1325
MspR9I	CCNGG	1 cut(s)	335
Mva1269I	GAATGC	1 cut(s)	1336
MvaI	CCWGG	1 cut(s)	335
MvnI	CGCG	4 cut(s)	261, 388, 800, 1314
MwoI	GCNNNNNNNGC	9 cut(s)	194, 294, 537, 1057, 1210, 1264, 1414, 1526, 1603
NaeI	GCCGGC	1 cut(s)	481
NdeII	GATC	2 cut(s)	580, 993
NgoMIV	GCCGGC	1 cut(s)	479
NlaIII	CATG	2 cut(s)	874, 1262
NlaIV	GGNNCC	4 cut(s)	9, 920, 1125, 1140
NmeAIII	GCCGAG	2 cut(s)	486, 1279
NmuCI	GTSAC	2 cut(s)	781, 901
NruI	TCGCGA	1 cut(s)	800
NspV	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
PaqCI	CACCTGC	1 cut(s)	728
PceI	AGGCCT	2 cut(s)	1100, 1162
PcsI	WCGNNNNNNNCGW	2 cut(s)	312, 480
PctI	GAATGC	1 cut(s)	1336
PdiI	GCCGGC	1 cut(s)	481
PfeI	GAWTC	7 cut(s)	83, 617, 640, 710, 1147, 1321, 1397
PflMI	CCANNNNNTGG	2 cut(s)	93, 683
PleI	GAGTC	1 cut(s)	481
PpsI	GAGTC	1 cut(s)	481
Ppu21I	YACGTR	1 cut(s)	523
PpuMI	RGGWCCY	1 cut(s)	1124
Psp5II	RGGWCCY	1 cut(s)	1124
Psp6I	CCWGG	1 cut(s)	333
PspFI	CCCAGC	4 cut(s)	391, 412, 1001, 1112
PspGI	CCWGG	1 cut(s)	333
PspN4I	GGNNCC	4 cut(s)	9, 920, 1125, 1140
PspPI	GGNCC	3 cut(s)	96, 1124, 1537
PspPPI	RGGWCCY	1 cut(s)	1124
PstNI	CAGNNNCTG	1 cut(s)	419
RruI	TCGCGA	1 cut(s)	800
RsaI	GTAC	2 cut(s)	467, 1016
RsaNI	GTAC	2 cut(s)	466, 1015
RseI	CAYNNNNRTG	2 cut(s)	875, 1290
SaqAI	TTAA	5 cut(s)	375, 689, 1157, 1515, 1554
Sau3AI	GATC	2 cut(s)	580, 993
Sau96I	GGNCC	3 cut(s)	96, 1124, 1537
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	1 cut(s)	481
ScrFI	CCNGG	1 cut(s)	335
SfaNI	GCATC	4 cut(s)	442, 1099, 1282, 1593
SfuI	TTCGAA	4 cut(s)	983, 1067, 1166, 1546
SgrAI	CRCCGGYG	1 cut(s)	479
SinI	GGWCC	2 cut(s)	96, 1124
SmiMI	CAYNNNNRTG	2 cut(s)	875, 1290
SmlI	CTYRAG	2 cut(s)	1421, 1493
SmoI	CTYRAG	2 cut(s)	1421, 1493
SseBI	AGGCCT	2 cut(s)	1100, 1162
SspMI	CTAG	1 cut(s)	1052
StuI	AGGCCT	2 cut(s)	1100, 1162
StyD4I	CCNGG	1 cut(s)	333
TaaI	ACNGT	5 cut(s)	589, 781, 1447, 1560, 1590
TaiI	ACGT	4 cut(s)	267, 477, 525, 666
TaqI	TCGA	7 cut(s)	342, 758, 788, 983, 1067, 1166, 1546
TatI	WGTACW	2 cut(s)	465, 1014
TauI	GCSGC	9 cut(s)	185, 188, 311, 314, 447, 708, 931, 1063, 1317
TfiI	GAWTC	7 cut(s)	83, 617, 640, 710, 1147, 1321, 1397
Tru1I	TTAA	5 cut(s)	375, 689, 1157, 1515, 1554
Tru9I	TTAA	5 cut(s)	375, 689, 1157, 1515, 1554
TseFI	GTSAC	2 cut(s)	781, 901
TseI	GCWGC	3 cut(s)	288, 832, 1417
Tsp45I	GTSAC	2 cut(s)	781, 901
TspDTI	ATGAA	2 cut(s)	887, 911
TspGWI	ACGGA	2 cut(s)	660, 703
Van91I	CCANNNNNTGG	2 cut(s)	93, 683
VpaK11BI	GGWCC	2 cut(s)	96, 1124
XagI	CCTNNNNNAGG	1 cut(s)	332
XapI	RAATTY	3 cut(s)	1168, 1390, 1575
XspI	CTAG	1 cut(s)	1052
ZraI	GACGTC	2 cut(s)	265, 475
ZrmI	AGTACT	1 cut(s)	467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.