AT3G02520

Belongs to the 14-3-3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009784
Physical Location & Seq
Reverse (-)
526293 .. 528388
2096 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02520.2

Sequence Viewer

Length: 798 bp
ATGTCGTCTTCTCGGGAAGAGAATGTGTACTTAGCCAAGTTAGCTGAGCAAGCTGAACGTTATGAGGAAATGGTTGAGTTCATGGAGAAAGTTGCAAAGACTGTTGACACCGATGAGCTTACTGTCGAAGAGAGAAACCTCTTGTCTGTTGCTTACAAGAACGTCATTGGTGCTAGGAGAGCTTCCTGGAGGATCATATCTTCCATTGAACAGAAGGAAGAAAGCAGAGGAAACGATGATCATGTTTCCATTATCAAGGACTACAGAGGAAAGATCGAAACTGAACTCAGCAAAATCTGTGATGGAATACTCAATCTTCTGGATTCTCACCTTGTTCCCACTGCATCTTTGGCCGAGTCCAAAGTCTTTTACCTCAAAATGAAAGGAGATTACCACAGGTACCTTGCTGAGTTTAAGACTGGAGCTGAGAGGAAAGAAGCTGCTGAGAGCACTCTGGTTGCTTACAAGTCAGCTCAGGATATTGCACTTGCTGATTTAGCTCCTACTCATCCGATTAGACTGGGACTTGCTCTTAACTTCTCTGTCTTCTACTACGAGATTCTCAACTCACCTGATCGTGCCTGCAGTCTCGCAAAACAGGCTTTTGATGAGGCCATTTCTGAGCTGGATACATTAGGAGAAGAATCATACAAAGACAGTACGTTGATAATGCAACTTCTCCGTGACAATCTGACCCTTTGGAACTCTGACATCAATGATGAGGCGGGCGGTGATGAGATCAAGGAGGCGTCAAAACATGAGCCGGAAGAGGGGAAACCAGCTGAGACAGGGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000166 GO:0001505 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004620 GO:0004623 GO:0004857 GO:0004860 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006469 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006587 GO:0006588 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008144 GO:0008150 GO:0008152 GO:0008426 GO:0009058 GO:0009072 GO:0009308 GO:0009506 GO:0009507 GO:0009536 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010563 GO:0010605 GO:0012505 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0017076 GO:0018130 GO:0018958 GO:0019207 GO:0019210 GO:0019220 GO:0019222 GO:0019438 GO:0019752 GO:0019887 GO:0030054 GO:0030234 GO:0030291 GO:0030312 GO:0030554 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031570 GO:0032268 GO:0032269 GO:0032553 GO:0032555 GO:0032559 GO:0032768 GO:0032770 GO:0033554 GO:0033673 GO:0034641 GO:0035639 GO:0036094 GO:0042133 GO:0042136 GO:0042221 GO:0042325 GO:0042326 GO:0042427 GO:0042428 GO:0042430 GO:0042435 GO:0043085 GO:0043086 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043549 GO:0044092 GO:0044093 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045786 GO:0045859 GO:0045936 GO:0046189 GO:0046483 GO:0046686 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051341 GO:0051348 GO:0051353 GO:0051716 GO:0051726 GO:0052689 GO:0055044 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0097159 GO:0097164 GO:0097367 GO:0098772 GO:1901160 GO:1901162 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901615 GO:1901617
KEGG Pathways
Metabolic & Signaling
ko04011 ko04110 ko04114 ko04142 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04142 map04151 map04390 map04391 map04722 map05169 map05203
Pfam Domains
Protein Families
14-3-3

Protein Analysis

265

Amino Acids

29.82

Weight (kDa)

4.74

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
14-3-3 PF00244 11 - 235 9.8e-105 14-3-3 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0009784)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02520 AT3G02520 AT5G16050 AT5G16050 AT5G38480 AT5G38480 AT5G38480
fragaria_vesca FvH4_6g45301
malus_domestica MD07G1096000.v1.1 MD17G1074900.v1.1 MD17G1105100.v1.1
prunus_persica Prupe.3G239000_v2.0.a1
pyrus_communis pycom09g01110
rosa_chinensis RchiOBHm_Chr2g0163061
rosa_laevigata RLG00000021368
rosa_multiflora Rmu_sc0003984.1_g000004
rosa_roxburghii Rroxscaffold_2G00087580
rosa_rugosa Rorug02G0500100
rosa_samantha Rh2AG566400 Rh2BG578800
rosa_wichuraiana Rw2G046890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 399
AccB1I GGYRCC 1 cut(s) 399
AciI CCGC 2 cut(s) 725, 729
AclI AACGTT 1 cut(s) 58
AclWI GGATC 1 cut(s) 200
AcoI YGGCCR 1 cut(s) 351
AcyI GRCGYC 1 cut(s) 749
AfaI GTAC 3 cut(s) 29, 401, 661
AfiI CCNNNNNNNGG 1 cut(s) 770
AgsI TTSAA 1 cut(s) 209
AjnI CCWGG 1 cut(s) 185
Alw21I GWGCWC 1 cut(s) 452
Alw26I GTCTC 2 cut(s) 593, 779
AlwI GGATC 1 cut(s) 200
Ama87I CYCGRG 1 cut(s) 12
AoxI GGCC 2 cut(s) 351, 612
ApeKI GCWGC 1 cut(s) 440
Asp718I GGTACC 1 cut(s) 399
AsuHPI GGTGA 3 cut(s) 320, 561, 743
AvaI CYCGRG 1 cut(s) 12
BanI GGYRCC 1 cut(s) 399
BbsI GAAGAC 1 cut(s) 538
Bbv12I GWGCWC 1 cut(s) 452
BbvI GCAGC 1 cut(s) 427
BccI CCATC 1 cut(s) 296
BciT130I CCWGG 1 cut(s) 187
BciVI GTATCC 1 cut(s) 622
BclI TGATCA 1 cut(s) 238
BcoDI GTCTC 2 cut(s) 593, 779
BfaI CTAG 1 cut(s) 174
BfmI CTRYAG 2 cut(s) 262, 583
BfuI GTATCC 1 cut(s) 622
BisI GCNGC 1 cut(s) 441
BlpI GCTNAGC 1 cut(s) 45
BlsI GCNGC 1 cut(s) 442
Bme1390I CCNGG 1 cut(s) 187
BmeT110I CYCGRG 1 cut(s) 12
BmiI GGNNCC 1 cut(s) 401
BmrFI CCNGG 1 cut(s) 187
BmrI ACTGGG 1 cut(s) 530
BmsI GCATC 1 cut(s) 353
BmuI ACTGGG 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 538
BpmI CTGGAG 2 cut(s) 208, 441
Bpu10I CCTNAGC 1 cut(s) 474
Bpu1102I GCTNAGC 1 cut(s) 45
BsaHI GRCGYC 1 cut(s) 749
Bsc4I CCNNNNNNNGG 1 cut(s) 770
Bse1I ACTGG 2 cut(s) 424, 525
BseBI CCWGG 1 cut(s) 187
BseGI GGATG 1 cut(s) 508
BseLI CCNNNNNNNGG 1 cut(s) 770
BseMII CTCAG 8 cut(s) 36, 301, 399, 417, 435, 488, 612, 774
BseNI ACTGG 2 cut(s) 424, 525
BseXI GCAGC 1 cut(s) 427
BshFI GGCC 2 cut(s) 353, 614
BshNI GGYRCC 1 cut(s) 399
BsiHKAI GWGCWC 1 cut(s) 452
BsiHKCI CYCGRG 1 cut(s) 12
BsiSI CCGG 1 cut(s) 764
BslFI GGGAC 1 cut(s) 537
BslI CCNNNNNNNGG 1 cut(s) 770
BsmAI GTCTC 2 cut(s) 593, 779
BsmFI GGGAC 1 cut(s) 537
BsnI GGCC 2 cut(s) 353, 614
BsoBI CYCGRG 1 cut(s) 12
Bsp1286I GDGCHC 1 cut(s) 452
Bsp143I GATC 5 cut(s) 192, 238, 273, 574, 738
Bsp1720I GCTNAGC 1 cut(s) 45
BspACI CCGC 2 cut(s) 725, 729
BspANI GGCC 2 cut(s) 353, 614
BspCNI CTCAG 8 cut(s) 37, 300, 400, 418, 436, 487, 613, 775
BspLI GGNNCC 1 cut(s) 401
BspMAI CTGCAG 1 cut(s) 587
BspPI GGATC 1 cut(s) 200
BspT107I GGYRCC 1 cut(s) 399
BsrI ACTGG 2 cut(s) 424, 525
BssMI GATC 5 cut(s) 192, 238, 273, 574, 738
BssNI GRCGYC 1 cut(s) 749
Bst2UI CCWGG 1 cut(s) 187
Bst4CI ACNGT 3 cut(s) 103, 124, 659
Bst6I CTCTTC 3 cut(s) 12, 123, 762
BstACI GRCGYC 1 cut(s) 749
BstC8I GCNNGC 3 cut(s) 51, 583, 727
BstDEI CTNAG 9 cut(s) 31, 45, 287, 408, 426, 444, 474, 621, 783
BstF5I GGATG 1 cut(s) 508
BstKTI GATC 5 cut(s) 195, 241, 276, 577, 741
BstMAI GTCTC 2 cut(s) 593, 779
BstMBI GATC 5 cut(s) 192, 238, 273, 574, 738
BstMWI GCNNNNNNNGC 6 cut(s) 41, 50, 179, 350, 497, 599
BstNI CCWGG 1 cut(s) 187
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 2 cut(s) 262, 583
BstV1I GCAGC 1 cut(s) 427
BstV2I GAAGAC 1 cut(s) 538
BsuI GTATCC 1 cut(s) 622
BsuRI GGCC 2 cut(s) 353, 614
BtsCI GGATG 1 cut(s) 508
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 3 cut(s) 51, 583, 727
CseI GACGC 1 cut(s) 738
Csp6I GTAC 3 cut(s) 28, 400, 660
CviAII CATG 3 cut(s) 82, 242, 758
CviQI GTAC 3 cut(s) 28, 400, 660
DdeI CTNAG 9 cut(s) 31, 45, 287, 408, 426, 444, 474, 621, 783
DpnI GATC 5 cut(s) 194, 240, 275, 576, 740
DpnII GATC 5 cut(s) 192, 238, 273, 574, 738
EaeI YGGCCR 1 cut(s) 351
Eam1104I CTCTTC 3 cut(s) 12, 123, 762
EarI CTCTTC 3 cut(s) 12, 123, 762
Eco88I CYCGRG 1 cut(s) 12
EcoRII CCWGG 1 cut(s) 185
FaeI CATG 3 cut(s) 85, 245, 761
FaiI YATR 6 cut(s) 63, 83, 197, 243, 649, 759
FaqI GGGAC 1 cut(s) 537
FatI CATG 3 cut(s) 81, 241, 757
FauI CCCGC 1 cut(s) 718
FbaI TGATCA 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 441
FokI GGATG 1 cut(s) 495
Fsp4HI GCNGC 1 cut(s) 441
FspBI CTAG 1 cut(s) 174
GluI GCNGC 1 cut(s) 441
GsuI CTGGAG 2 cut(s) 208, 441
HaeIII GGCC 2 cut(s) 353, 614
HapII CCGG 1 cut(s) 764
HgaI GACGC 1 cut(s) 738
Hin1I GRCGYC 1 cut(s) 749
Hin1II CATG 3 cut(s) 85, 245, 761
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 4 cut(s) 323, 356, 559, 644
HpaII CCGG 1 cut(s) 764
HphI GGTGA 3 cut(s) 320, 561, 743
Hpy166II GTNNAC 2 cut(s) 28, 106
Hpy188I TCNGA 4 cut(s) 513, 622, 693, 709
Hpy188III TCNNGA 3 cut(s) 14, 320, 476
Hpy8I GTNNAC 2 cut(s) 28, 106
HpyAV CCTTC 1 cut(s) 208
HpyCH4III ACNGT 3 cut(s) 103, 124, 659
HpyCH4IV ACGT 3 cut(s) 58, 162, 662
HpyCH4V TGCA 5 cut(s) 95, 344, 485, 585, 673
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 50, 179, 350, 497, 599
HpyF3I CTNAG 9 cut(s) 31, 45, 287, 408, 426, 444, 474, 621, 783
HpySE526I ACGT 3 cut(s) 58, 162, 662
Hsp92I GRCGYC 1 cut(s) 749
Hsp92II CATG 3 cut(s) 85, 245, 761
KpnI GGTACC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 5 cut(s) 192, 238, 273, 574, 738
LmnI GCTCC 2 cut(s) 422, 505
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 1 cut(s) 353
MaeI CTAG 1 cut(s) 174
MaeII ACGT 3 cut(s) 58, 162, 662
MaeIII GTNAC 1 cut(s) 683
MalI GATC 5 cut(s) 194, 240, 275, 576, 740
MboI GATC 5 cut(s) 192, 238, 273, 574, 738
MboII GAAGA 8 cut(s) 29, 140, 192, 230, 308, 538, 653, 779
MhlI GDGCHC 1 cut(s) 452
MlyI GAGTC 1 cut(s) 365
MseI TTAA 2 cut(s) 414, 534
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 1 cut(s) 764
MspR9I CCNGG 1 cut(s) 187
MvaI CCWGG 1 cut(s) 187
MwoI GCNNNNNNNGC 6 cut(s) 41, 50, 179, 350, 497, 599
NdeII GATC 5 cut(s) 192, 238, 273, 574, 738
NlaIII CATG 3 cut(s) 85, 245, 761
NlaIV GGNNCC 1 cut(s) 401
NmeAIII GCCGAG 1 cut(s) 379
NmuCI GTSAC 1 cut(s) 683
PfeI GAWTC 3 cut(s) 323, 559, 644
PfoI TCCNGGA 1 cut(s) 185
PkrI GCNGC 1 cut(s) 442
PleI GAGTC 1 cut(s) 364
PpsI GAGTC 1 cut(s) 364
Psp1406I AACGTT 1 cut(s) 58
Psp6I CCWGG 1 cut(s) 185
PspGI CCWGG 1 cut(s) 185
PspN4I GGNNCC 1 cut(s) 401
PstI CTGCAG 1 cut(s) 587
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 3 cut(s) 29, 401, 661
RsaNI GTAC 3 cut(s) 28, 400, 660
SaqAI TTAA 2 cut(s) 414, 534
SatI GCNGC 1 cut(s) 441
Sau3AI GATC 5 cut(s) 192, 238, 273, 574, 738
SchI GAGTC 1 cut(s) 365
ScrFI CCNGG 1 cut(s) 187
SduI GDGCHC 1 cut(s) 452
SfaNI GCATC 1 cut(s) 353
SfcI CTRYAG 2 cut(s) 262, 583
SsiI CCGC 2 cut(s) 725, 729
SspMI CTAG 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 185
TaaI ACNGT 3 cut(s) 103, 124, 659
TaiI ACGT 3 cut(s) 61, 165, 665
TaqI TCGA 2 cut(s) 126, 276
TatI WGTACW 1 cut(s) 27
TfiI GAWTC 3 cut(s) 323, 559, 644
Tru1I TTAA 2 cut(s) 414, 534
Tru9I TTAA 2 cut(s) 414, 534
TscAI CASTG 1 cut(s) 346
TseFI GTSAC 1 cut(s) 683
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 1 cut(s) 683
TspDTI ATGAA 2 cut(s) 70, 395
TspGWI ACGGA 1 cut(s) 671
TspRI CASTG 1 cut(s) 346
XcmI CCANNNNNNNNNTGG 2 cut(s) 346, 622
XspI CTAG 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.