Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009781

Physical Location & Seq

Genomic Coordinates Reverse (-)

1013929 .. 1019418

Gene Structure 5490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G03940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGCCAGAGTTAAGAAGTGGAGCAAGGAGATCGAGACGCCTTGACGAGCAGCCTAACCCTCCGCTAGTTGAACAAGCAGAAAATATCGTACTTCCTCCTCAGACTGCAACAAGGAGAAGAGGTGGTGGTAGAGGAAGGGGGAATGCTGCTTTAGCTAAAGGTGCGGCACCTCCAAGACCAACTGCTGCCGGTAGGGGCAGGGGTATCAGGTTGACAGACTTAGAGCCAGAACCTTGTGAGGTTCGTCCAGCTGCAGGTGCTATAGGGGCCACTGAACCTGCCTTAAATCGAGTTGAAGGGGTAGCTGATAAGGATATTGCTGCGGAAGGCGGTAGCGCAGAGAAAGTAGTAGGCATGGAAGAAGATTCCAGCATGGGTCCAGTCCCTGAGAGGGTACAAGTTGGAAATTCTCCTGTTTATAAGACGGAGAGGAAACTTGGTAAAGGTGGCTTTGGTCAAGTTTATGTTGGCAGAAGGGTGAGTGGTGGCAGTGATAGGATTGGAGCAGATGCAATTGAGGTAGCTCTAAAACTTGAACATCGCAATAGTAAAGGCTGTAACTTTGGCCCACCTTACGAGTGGCAAGTGTACAATACGCTCAATAGCTGTTATGGAATTCCTGCTGTACATCATAAGGGTCGTCAAGGAGATTTTTACATTCTGGTCATGGACATGCTTGGGCCTAGCCTTTGGGATGTTTGGAATTCTTTGGCTCAATCGATGTCTCCAAACATGGTAGCATGCATTGCAGTGGAGGCGATATCTATTCTTGAAAAACTGCATATGAAGGGGTTTGTGCATGGAGATGTGAAACCAGAAAACTTTTTGCTTGGTCAGCCTGGAACAGCAGACGAGAAGAAACTATACCTTATCGATCTTGGTCTAGCATCAAGATGGAAAGATTCACACTCTGGCCAGCATGTTGAATATGATCAAAGGCCAGATGTATTTAGAGGAACAATAAGGTATGCAAGTTGCCATGCACATCTTGGTCGTACAGGAAGTCGGAGGGATGATCTGGAGTCATTGGCTTATACATTAATATTTCTGATGCGGGGAAGGTTGCCATGGCAAGGATACCAGGGTGATAACAAGAGCTTTCTTGTTTGCAAGAAAAAGATGTCAACCTCTCCTGAATTGATGTGTTGTTTTTGTCCTCCCCCGTTTAAGCTGTTCCTCGAGGCAGTTACGAATATGAAGTTTGATGAGGAGCCCAACTATGCCAAGCTTATCTCGATTTTTGATACTCTTATCGAGCCATGTGCTATATCTAGACCAATTAGAATTGATGGGGCTCTAAAGGTTGGCCAAAAGCGAGGAAGATTGCTTATCAATTTGGAAGAGGATGAACAGCCAAGGAAGAAAATTAGAATCGGCAGTCCTGCCACACAGTGGATTTCAGTCTATAATGCACGCCGTCCTATGAAACAGAGATATCATTACAACGTTGCAGACTTAAGACTTGCACAGCATGTTGAGAAAGGTAATGAGGATGGCCTTTTCATAAGCTGTGTAGCATCATCAGCTAATCTCTGGGCCATCATCATGGATGCTGGGACTGGTTTCAGTTCTCAAGTTTATGAACTGTCCTCAGTCTTCCTGCACAAGGACTGGATCATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGTGCAAATAATGGAAGCTCGTTGGTTGTTATGGCTAAAGGAACTCCTTATACCCAGCAATCTTACAAAGTCAGCGACTCATTTCCATTCAAGTGGATAAATAAAAAGTGGAAAGAAGGTTTTCATGTAACATCCATGACCACCGCTGGGAGTCGTTGGGGTGTAGTAATGTCCAGGAACTCAGGCTACTCTGAACAGGTGGTGGAGCTTGACTTCTTGTACCCAAGTGAAGGAATACATCGAAGGTGGGAAAGTGGATACAGGATAACATCAATGGCTGCAACAGCTGATCAAGCAGCTCTTATATTGAGTATACCTAAACGAAAAATAACCGATGAAACCCAAGAGACTCTCCGGACTTCTGCCTTCCCAAGTACCCATGTCAAGGAGAAATGGGCGAAAAATCTGTACATTGCATCAATATGCTATGGTCGGACAGTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032501 GO:0032922 GO:0036211 GO:0042176 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0065007 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

701

Amino Acids

77.99

Weight (kDa)

9.07

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	140 - 372	3.2e-17	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	141 - 304	1.8e-06	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	250 - 350	1e-07	Fungal protein kinase
DUF7477	PF24289	434 - 700	3.8e-161	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03940 AT5G18190 AT5G18190
fragaria_vesca	FvH4_1g28110 FvH4_1g28110 FvH4_1g28110 FvH4_1g28110
malus_domestica	MD12G1003400.v1.1
prunus_persica	Prupe.7G003800_v2.0.a1
pyrus_communis	pycom12g00290
rosa_chinensis	RchiOBHm_Chr3g0497131
rosa_laevigata	RLG00000022480
rosa_multiflora	Rmu_ssc0000003.1_g000001
rosa_roxburghii	Rroxscaffold_6G00388390
rosa_rugosa	Rorug03G0290200 Rorug03G0290300
rosa_samantha	Rh3AG334300 Rh3BG371400 Rh3CG368300 Rh3DG369300
rosa_wichuraiana	Rw3G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
AarI	CACCTGC	1 cut(s)	245
AbsI	CCTCGAGG	1 cut(s)	1178
Acc36I	ACCTGC	2 cut(s)	245, 286
AccB1I	GGYRCC	1 cut(s)	166
AccB7I	CCANNNNNTGG	1 cut(s)	1392
AccI	GTMKAC	1 cut(s)	1972
AccIII	TCCGGA	1 cut(s)	2013
AciI	CCGC	6 cut(s)	62, 164, 323, 330, 1054, 1803
AclI	AACGTT	1 cut(s)	1446
AclWI	GGATC	1 cut(s)	1622
AcoI	YGGCCR	2 cut(s)	913, 1306
AcsI	RAATTY	3 cut(s)	406, 615, 703
AcyI	GRCGYC	1 cut(s)	37
AdeI	CACNNNGTG	1 cut(s)	1392
AfaI	GTAC	8 cut(s)	90, 396, 590, 627, 997, 1880, 2035, 2069
AfiI	CCNNNNNNNGG	8 cut(s)	254, 391, 1073, 1392, 1606, 1806, 1889, 2044
AflII	CTTAAG	1 cut(s)	1456
AgsI	TTSAA	6 cut(s)	71, 296, 536, 773, 926, 1750
AjnI	CCWGG	3 cut(s)	838, 1080, 1832
Alw26I	GTCTC	3 cut(s)	28, 729, 2000
AlwI	GGATC	1 cut(s)	1622
AlwNI	CAGNNNCTG	1 cut(s)	386
Ama87I	CYCGRG	1 cut(s)	1178
Aor13HI	TCCGGA	1 cut(s)	2013
AoxI	GGCC	8 cut(s)	267, 565, 680, 913, 938, 1306, 1495, 1536
ApeKI	GCWGC	7 cut(s)	49, 146, 185, 251, 320, 1937, 1955
ApoI	RAATTY	3 cut(s)	406, 615, 703
AseI	ATTAAT	1 cut(s)	1040
Asp700I	GAANNNNTTC	1 cut(s)	1779
AspLEI	GCGC	1 cut(s)	338
AspS9I	GGNCC	5 cut(s)	267, 377, 566, 680, 1536
AsuHPI	GGTGA	2 cut(s)	490, 1097
AvaI	CYCGRG	1 cut(s)	1178
AvaII	GGWCC	1 cut(s)	377
BaeI	ACNNNNGTAYC	2 cut(s)	1069, 1102
BalI	TGGCCA	2 cut(s)	915, 1308
BanI	GGYRCC	1 cut(s)	166
BanII	GRGCYC	2 cut(s)	1215, 1297
BarI	GAAGNNNNNNTAC	2 cut(s)	848, 880
BbsI	GAAGAC	1 cut(s)	1588
BbvI	GCAGC	7 cut(s)	61, 133, 172, 238, 307, 1924, 1967
BccI	CCATC	4 cut(s)	888, 1283, 1487, 1547
BceAI	ACGGC	1 cut(s)	1401
BcgI	CGANNNNNNTGC	4 cut(s)	12, 46, 1244, 1278
BciT130I	CCWGG	3 cut(s)	840, 1082, 1834
BciVI	GTATCC	2 cut(s)	1070, 1910
BclI	TGATCA	2 cut(s)	931, 1948
BcoDI	GTCTC	3 cut(s)	28, 729, 2000
BfaI	CTAG	4 cut(s)	65, 684, 884, 1272
BfmI	CTRYAG	2 cut(s)	252, 261
BfrI	CTTAAG	1 cut(s)	1456
BfuAI	ACCTGC	2 cut(s)	245, 286
BfuI	GTATCC	2 cut(s)	1070, 1910
BisI	GCNGC	8 cut(s)	50, 147, 165, 186, 252, 321, 1938, 1956
BlsI	GCNGC	8 cut(s)	51, 148, 166, 187, 253, 322, 1939, 1957
Bme1390I	CCNGG	3 cut(s)	840, 1082, 1834
Bme18I	GGWCC	1 cut(s)	377
BmeT110I	CYCGRG	1 cut(s)	1178
BmgT120I	GGNCC	5 cut(s)	267, 377, 566, 680, 1536
BmiI	GGNNCC	4 cut(s)	168, 268, 378, 1212
BmrFI	CCNGG	3 cut(s)	840, 1082, 1834
BmsI	GCATC	6 cut(s)	499, 896, 1041, 1526, 1540, 2084
BpiI	GAAGAC	1 cut(s)	1588
BpmI	CTGGAG	1 cut(s)	1040
BpuEI	CTTGAG	1 cut(s)	1557
Bsa29I	ATCGAT	2 cut(s)	719, 873
BsaHI	GRCGYC	1 cut(s)	37
BsaJI	CCNNGG	3 cut(s)	1067, 1081, 1355
BsaWI	WCCGGW	1 cut(s)	2013
BsaXI	ACNNNNNCTCC	2 cut(s)	106, 136
Bsc4I	CCNNNNNNNGG	8 cut(s)	254, 391, 1073, 1392, 1606, 1806, 1889, 2044
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	3 cut(s)	380, 1564, 1616
Bse3DI	GCAATG	2 cut(s)	744, 2070
BseAI	TCCGGA	1 cut(s)	2013
BseBI	CCWGG	3 cut(s)	840, 1082, 1834
BseCI	ATCGAT	2 cut(s)	719, 873
BseDI	CCNNGG	3 cut(s)	1067, 1081, 1355
BseGI	GGATG	6 cut(s)	700, 1018, 1351, 1498, 1555, 1790
BseLI	CCNNNNNNNGG	8 cut(s)	254, 391, 1073, 1392, 1606, 1806, 1889, 2044
BseMI	GCAATG	2 cut(s)	744, 2070
BseMII	CTCAG	4 cut(s)	113, 378, 1605, 1854
BseNI	ACTGG	3 cut(s)	380, 1564, 1616
BseRI	GAGGAG	2 cut(s)	87, 1223
BseXI	GCAGC	7 cut(s)	61, 133, 172, 238, 307, 1924, 1967
BseYI	CCCAGC	3 cut(s)	1553, 1713, 1805
BsgI	GTGCAG	1 cut(s)	1586
BshFI	GGCC	8 cut(s)	269, 567, 682, 915, 940, 1308, 1497, 1538
BshNI	GGYRCC	1 cut(s)	166
BshVI	ATCGAT	2 cut(s)	719, 873
BsiHKCI	CYCGRG	1 cut(s)	1178
BsiSI	CCGG	2 cut(s)	189, 2014
BslFI	GGGAC	2 cut(s)	368, 1570
BslI	CCNNNNNNNGG	8 cut(s)	254, 391, 1073, 1392, 1606, 1806, 1889, 2044
BsmAI	GTCTC	3 cut(s)	28, 729, 2000
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	2 cut(s)	368, 1570
BsmI	GAATGC	1 cut(s)	148
BsnI	GGCC	8 cut(s)	269, 567, 682, 915, 940, 1308, 1497, 1538
BsoBI	CYCGRG	1 cut(s)	1178
Bsp1286I	GDGCHC	2 cut(s)	1215, 1297
Bsp13I	TCCGGA	1 cut(s)	2013
Bsp1407I	TGTACA	3 cut(s)	588, 625, 2067
Bsp143I	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
Bsp19I	CCATGG	1 cut(s)	1067
BspACI	CCGC	6 cut(s)	62, 164, 323, 330, 1054, 1803
BspANI	GGCC	8 cut(s)	269, 567, 682, 915, 940, 1308, 1497, 1538
BspCNI	CTCAG	4 cut(s)	112, 379, 1604, 1853
BspDI	ATCGAT	2 cut(s)	719, 873
BspEI	TCCGGA	1 cut(s)	2013
BspLI	GGNNCC	4 cut(s)	168, 268, 378, 1212
BspMAI	CTGCAG	1 cut(s)	256
BspMI	ACCTGC	2 cut(s)	245, 286
BspPI	GGATC	1 cut(s)	1622
BspT107I	GGYRCC	1 cut(s)	166
BspTI	CTTAAG	1 cut(s)	1456
BsrDI	GCAATG	2 cut(s)	744, 2070
BsrFI	RCCGGY	1 cut(s)	188
BsrGI	TGTACA	3 cut(s)	588, 625, 2067
BsrI	ACTGG	3 cut(s)	380, 1564, 1616
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	3 cut(s)	1067, 1081, 1355
BssMI	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
BssNAI	GTATAC	1 cut(s)	1973
BssNI	GRCGYC	1 cut(s)	37
BssT1I	CCWWGG	2 cut(s)	1067, 1355
Bst1107I	GTATAC	1 cut(s)	1973
Bst2UI	CCWGG	3 cut(s)	840, 1082, 1834
Bst4CI	ACNGT	3 cut(s)	1392, 1587, 2098
Bst6I	CTCTTC	2 cut(s)	112, 1335
BstACI	GRCGYC	1 cut(s)	37
BstAFI	CTTAAG	1 cut(s)	1456
BstAPI	GCANNNNNTGC	1 cut(s)	746
BstAUI	TGTACA	3 cut(s)	588, 625, 2067
BstC8I	GCNNGC	3 cut(s)	742, 917, 1414
BstDEI	CTNAG	5 cut(s)	99, 220, 387, 1591, 1840
BstDSI	CCRYGG	1 cut(s)	1067
BstENI	CCTNNNNNAGG	1 cut(s)	1604
BstF5I	GGATG	6 cut(s)	700, 1018, 1351, 1498, 1555, 1790
BstHHI	GCGC	1 cut(s)	338
BstKTI	GATC	6 cut(s)	32, 877, 934, 1018, 1617, 1951
BstMAI	GTCTC	3 cut(s)	28, 729, 2000
BstMBI	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
BstNI	CCWGG	3 cut(s)	840, 1082, 1834
BstNSI	RCATGY	4 cut(s)	676, 744, 923, 1475
BstSCI	CCNGG	3 cut(s)	838, 1080, 1832
BstSFI	CTRYAG	2 cut(s)	252, 261
BstV1I	GCAGC	7 cut(s)	61, 133, 172, 238, 307, 1924, 1967
BstV2I	GAAGAC	1 cut(s)	1588
BstXI	CCANNNNNNTGG	2 cut(s)	1546, 1752
BstZ17I	GTATAC	1 cut(s)	1973
Bsu15I	ATCGAT	2 cut(s)	719, 873
BsuI	GTATCC	2 cut(s)	1070, 1910
BsuRI	GGCC	8 cut(s)	269, 567, 682, 915, 940, 1308, 1497, 1538
BsuTUI	ATCGAT	2 cut(s)	719, 873
BtgI	CCRYGG	1 cut(s)	1067
BtgZI	GCGATG	1 cut(s)	524
BtsCI	GGATG	6 cut(s)	700, 1018, 1351, 1498, 1555, 1790
BtsI	GCAGTG	2 cut(s)	496, 756
BtsIMutI	CAGTG	4 cut(s)	270, 496, 756, 1397
BveI	ACCTGC	2 cut(s)	245, 286
Cac8I	GCNNGC	3 cut(s)	742, 917, 1414
CaiI	CAGNNNCTG	1 cut(s)	386
CfoI	GCGC	1 cut(s)	338
Cfr10I	RCCGGY	1 cut(s)	188
Cfr13I	GGNCC	5 cut(s)	267, 377, 566, 680, 1536
ClaI	ATCGAT	2 cut(s)	719, 873
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	8 cut(s)	89, 395, 589, 626, 996, 1879, 2034, 2068
CviQI	GTAC	8 cut(s)	89, 395, 589, 626, 996, 1879, 2034, 2068
DdeI	CTNAG	5 cut(s)	99, 220, 387, 1591, 1840
DpnI	GATC	6 cut(s)	31, 876, 933, 1017, 1616, 1950
DpnII	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
DraIII	CACNNNGTG	1 cut(s)	1392
EaeI	YGGCCR	2 cut(s)	913, 1306
Eam1104I	CTCTTC	2 cut(s)	112, 1335
EarI	CTCTTC	2 cut(s)	112, 1335
Eco130I	CCWWGG	2 cut(s)	1067, 1355
Eco24I	GRGCYC	2 cut(s)	1215, 1297
Eco32I	GATATC	2 cut(s)	762, 1436
Eco47I	GGWCC	1 cut(s)	377
Eco88I	CYCGRG	1 cut(s)	1178
EcoNI	CCTNNNNNAGG	1 cut(s)	1604
EcoRI	GAATTC	2 cut(s)	615, 703
EcoRII	CCWGG	3 cut(s)	838, 1080, 1832
EcoRV	GATATC	2 cut(s)	762, 1436
EcoT14I	CCWWGG	2 cut(s)	1067, 1355
EcoT22I	ATGCAT	1 cut(s)	746
EcoT38I	GRGCYC	2 cut(s)	1215, 1297
ErhI	CCWWGG	2 cut(s)	1067, 1355
Esp3I	CGTCTC	1 cut(s)	28
FalI	AAGNNNNNCTT	2 cut(s)	1944, 1976
FaqI	GGGAC	2 cut(s)	368, 1570
FauI	CCCGC	1 cut(s)	1047
FauNDI	CATATG	1 cut(s)	783
FbaI	TGATCA	2 cut(s)	931, 1948
FblI	GTMKAC	1 cut(s)	1972
Fnu4HI	GCNGC	8 cut(s)	50, 147, 165, 186, 252, 321, 1938, 1956
FokI	GGATG	6 cut(s)	707, 1025, 1358, 1505, 1562, 1777
FriOI	GRGCYC	2 cut(s)	1215, 1297
Fsp4HI	GCNGC	8 cut(s)	50, 147, 165, 186, 252, 321, 1938, 1956
FspBI	CTAG	4 cut(s)	65, 684, 884, 1272
GlaI	GCGC	1 cut(s)	337
GluI	GCNGC	8 cut(s)	50, 147, 165, 186, 252, 321, 1938, 1956
GsaI	CCCAGC	3 cut(s)	1557, 1717, 1809
GsuI	CTGGAG	1 cut(s)	1040
HaeIII	GGCC	8 cut(s)	269, 567, 682, 915, 940, 1308, 1497, 1538
HapII	CCGG	2 cut(s)	189, 2014
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	1 cut(s)	338
Hin1I	GRCGYC	1 cut(s)	37
Hin6I	GCGC	1 cut(s)	336
HinP1I	GCGC	1 cut(s)	336
HincII	GTYRAC	2 cut(s)	213, 1125
HindII	GTYRAC	2 cut(s)	213, 1125
HindIII	AAGCTT	1 cut(s)	1226
HinfI	GANTC	7 cut(s)	365, 902, 1022, 1371, 1736, 1810, 2008
HpaII	CCGG	2 cut(s)	189, 2014
HphI	GGTGA	2 cut(s)	490, 1097
Hpy166II	GTNNAC	4 cut(s)	213, 589, 1125, 1973
Hpy188I	TCNGA	5 cut(s)	102, 1008, 1050, 1852, 2094
Hpy188III	TCNNGA	8 cut(s)	33, 770, 891, 1019, 1133, 1234, 1272, 2014
Hpy8I	GTNNAC	4 cut(s)	213, 589, 1125, 1973
HpyCH4III	ACNGT	3 cut(s)	1392, 1587, 2098
HpyCH4IV	ACGT	1 cut(s)	1446
HpyF3I	CTNAG	5 cut(s)	99, 220, 387, 1591, 1840
HpySE526I	ACGT	1 cut(s)	1446
Hsp92I	GRCGYC	1 cut(s)	37
HspAI	GCGC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	2013
Ksp22I	TGATCA	2 cut(s)	931, 1948
Kzo9I	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
LmnI	GCTCC	4 cut(s)	20, 503, 1210, 1864
Lsp1109I	GCAGC	7 cut(s)	61, 133, 172, 238, 307, 1924, 1967
LweI	GCATC	6 cut(s)	499, 896, 1041, 1526, 1540, 2084
MaeI	CTAG	4 cut(s)	65, 684, 884, 1272
MaeII	ACGT	1 cut(s)	1446
MaeIII	GTNAC	3 cut(s)	557, 1186, 1786
MalI	GATC	6 cut(s)	31, 876, 933, 1017, 1616, 1950
MboI	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
MboII	GAAGA	8 cut(s)	129, 371, 374, 868, 1332, 1352, 1372, 1588
MfeI	CAATTG	1 cut(s)	513
MhlI	GDGCHC	2 cut(s)	1215, 1297
MlsI	TGGCCA	2 cut(s)	915, 1308
MluCI	AATT	9 cut(s)	406, 513, 615, 703, 1136, 1278, 1284, 1333, 1365
MluNI	TGGCCA	2 cut(s)	915, 1308
MlyI	GAGTC	4 cut(s)	1031, 1730, 1819, 2002
MmeI	TCCRAC	3 cut(s)	382, 986, 2072
Mox20I	TGGCCA	2 cut(s)	915, 1308
Mph1103I	ATGCAT	1 cut(s)	746
MroI	TCCGGA	1 cut(s)	2013
MroXI	GAANNNNTTC	1 cut(s)	1779
MscI	TGGCCA	2 cut(s)	915, 1308
MseI	TTAA	5 cut(s)	11, 284, 1040, 1167, 1457
MslI	CAYNNNNRTG	7 cut(s)	671, 749, 804, 892, 1544, 1750, 2080
Msp20I	TGGCCA	2 cut(s)	915, 1308
MspA1I	CMGCKG	3 cut(s)	251, 1805, 1946
MspCI	CTTAAG	1 cut(s)	1456
MspI	CCGG	2 cut(s)	189, 2014
MspR9I	CCNGG	3 cut(s)	840, 1082, 1834
MunI	CAATTG	1 cut(s)	513
Mva1269I	GAATGC	1 cut(s)	148
MvaI	CCWGG	3 cut(s)	840, 1082, 1834
NcoI	CCATGG	1 cut(s)	1067
NdeI	CATATG	1 cut(s)	783
NdeII	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
NlaIV	GGNNCC	4 cut(s)	168, 268, 378, 1212
NsiI	ATGCAT	1 cut(s)	746
NspI	RCATGY	4 cut(s)	676, 744, 923, 1475
PaeI	GCATGC	1 cut(s)	744
PaeR7I	CTCGAG	1 cut(s)	1178
PaqCI	CACCTGC	1 cut(s)	245
PctI	GAATGC	1 cut(s)	148
PdmI	GAANNNNTTC	1 cut(s)	1779
PfeI	GAWTC	3 cut(s)	365, 902, 1371
PflMI	CCANNNNNTGG	1 cut(s)	1392
PfoI	TCCNGGA	1 cut(s)	1832
PkrI	GCNGC	8 cut(s)	51, 148, 166, 187, 253, 322, 1939, 1957
PleI	GAGTC	4 cut(s)	1030, 1730, 1818, 2002
PpsI	GAGTC	4 cut(s)	1030, 1730, 1818, 2002
PshBI	ATTAAT	1 cut(s)	1040
PsiI	TTATAA	1 cut(s)	420
Psp1406I	AACGTT	1 cut(s)	1446
Psp6I	CCWGG	3 cut(s)	838, 1080, 1832
PspFI	CCCAGC	3 cut(s)	1553, 1713, 1805
PspGI	CCWGG	3 cut(s)	838, 1080, 1832
PspN4I	GGNNCC	4 cut(s)	168, 268, 378, 1212
PspPI	GGNCC	5 cut(s)	267, 377, 566, 680, 1536
PspXI	VCTCGAGB	1 cut(s)	1178
PsrI	GAACNNNNNNTAC	4 cut(s)	1693, 1725, 1829, 1861
PstI	CTGCAG	1 cut(s)	256
PstNI	CAGNNNCTG	1 cut(s)	386
PvuII	CAGCTG	2 cut(s)	251, 1946
RsaI	GTAC	8 cut(s)	90, 396, 590, 627, 997, 1880, 2035, 2069
RsaNI	GTAC	8 cut(s)	89, 395, 589, 626, 996, 1879, 2034, 2068
RseI	CAYNNNNRTG	7 cut(s)	671, 749, 804, 892, 1544, 1750, 2080
SaqAI	TTAA	5 cut(s)	11, 284, 1040, 1167, 1457
SatI	GCNGC	8 cut(s)	50, 147, 165, 186, 252, 321, 1938, 1956
Sau3AI	GATC	6 cut(s)	29, 874, 931, 1015, 1614, 1948
Sau96I	GGNCC	5 cut(s)	267, 377, 566, 680, 1536
SchI	GAGTC	4 cut(s)	1031, 1730, 1819, 2002
ScrFI	CCNGG	3 cut(s)	840, 1082, 1834
SduI	GDGCHC	2 cut(s)	1215, 1297
SfaNI	GCATC	6 cut(s)	499, 896, 1041, 1526, 1540, 2084
SfcI	CTRYAG	2 cut(s)	252, 261
Sfr274I	CTCGAG	1 cut(s)	1178
SinI	GGWCC	1 cut(s)	377
SlaI	CTCGAG	1 cut(s)	1178
SmiMI	CAYNNNNRTG	7 cut(s)	671, 749, 804, 892, 1544, 1750, 2080
SmlI	CTYRAG	3 cut(s)	1178, 1456, 1572
SmoI	CTYRAG	3 cut(s)	1178, 1456, 1572
SphI	GCATGC	1 cut(s)	744
Sse9I	AATT	9 cut(s)	406, 513, 615, 703, 1136, 1278, 1284, 1333, 1365
SsiI	CCGC	6 cut(s)	62, 164, 323, 330, 1054, 1803
SspI	AATATT	1 cut(s)	1044
SspMI	CTAG	4 cut(s)	65, 684, 884, 1272
StyD4I	CCNGG	3 cut(s)	838, 1080, 1832
StyI	CCWWGG	2 cut(s)	1067, 1355
TaaI	ACNGT	3 cut(s)	1392, 1587, 2098
TaiI	ACGT	1 cut(s)	1449
TaqI	TCGA	8 cut(s)	32, 289, 719, 873, 1179, 1235, 1254, 1900
TasI	AATT	9 cut(s)	406, 513, 615, 703, 1136, 1278, 1284, 1333, 1365
TatI	WGTACW	3 cut(s)	588, 625, 2067
TauI	GCSGC	1 cut(s)	167
TfiI	GAWTC	3 cut(s)	365, 902, 1371
Tru1I	TTAA	5 cut(s)	11, 284, 1040, 1167, 1457
Tru9I	TTAA	5 cut(s)	11, 284, 1040, 1167, 1457
TscAI	CASTG	4 cut(s)	277, 496, 756, 1397
TseI	GCWGC	7 cut(s)	49, 146, 185, 251, 320, 1937, 1955
TspDTI	ATGAA	8 cut(s)	800, 1211, 1362, 1439, 1492, 1596, 1772, 2010
TspGWI	ACGGA	1 cut(s)	440
TspRI	CASTG	4 cut(s)	277, 496, 756, 1397
Van91I	CCANNNNNTGG	1 cut(s)	1392
Vha464I	CTTAAG	1 cut(s)	1456
VpaK11BI	GGWCC	1 cut(s)	377
VspI	ATTAAT	1 cut(s)	1040
XagI	CCTNNNNNAGG	1 cut(s)	1604
XapI	RAATTY	3 cut(s)	406, 615, 703
XbaI	TCTAGA	1 cut(s)	1271
XceI	RCATGY	4 cut(s)	676, 744, 923, 1475
XcmI	CCANNNNNNNNNTGG	2 cut(s)	576, 986
XhoI	CTCGAG	1 cut(s)	1178
XmiI	GTMKAC	1 cut(s)	1972
XmnI	GAANNNNTTC	1 cut(s)	1779
XspI	CTAG	4 cut(s)	65, 684, 884, 1272
Zsp2I	ATGCAT	1 cut(s)	746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.