Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0009781

Physical Location & Seq

Genomic Coordinates Reverse (-)

46896000 .. 46901817

Gene Structure 5818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG371400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGCCAGAGTTGCGAAGCGGAGTGCGCAGATCAAAACGGCTTGATGATCTTCAGCCTTCCTCACAGCAGCAACCCATTGCTCAACCTGAGAATTGTCTGCTGCCAGTGCCTGCCCACAATAATAAACCTCAAAGGAGAGCTGCTGCCGGACGCGGTAGAGCTGCTAATGCTGTAGCTAAAGCACCTTCACCAGCAATACCCTCAAGGCCCACCCCACCTGCTCGAGGCCGCGGCGGCGGCGGCGTTAGGTTGATTGATTTAGACCCTGAACCTTGCCCTCTTCTTCCTCCACCTGCCGATCCCATTTATAACCGTGTTCAAGTTGTAGCCGATAAAGATATTGCAATGGAGGGTGGCGGCAGCGCAGACAAAGCTTTGGCAGTTGAAGAAGACGCAGGCGCAACTCCCGTTCCTGATAGGGTACAAGTGGGTAACTCTCCCCAATACAAGGTAGAAAGGAAGTTAGGTAAGGGTGGCTTTGGCCAAGTGTATGTTGGCAGAAGGGTTAGTGGTGGAACAGACAGGACAGGACCAGATGCAGTAGAGGTCGCTTTAAAGTTCGAACACAGAAATAGTAAAGGTTGCAATTATGGCCCTCCTTATGAGTGGCAAGTCTACAATACTCTAAATGGATGTTATGGAGTTCCATGGGTTCATTACAAGGGTCGCCAAGGGGATTTTTACATTCTGGTAATGGACATTCTTGGTCCCAGTCTATGGGATGTATGGAATTCTCTTGGTCAGACGATGTCTCCGAATATGGTGGCGTGCATTGCAGTGGAGGCAATATCAATTCTAGAAAAGCTTCACTCAAAAGGGTTTGTGCATGGAGATGTAAAACCTGAGAATTTCTTACTTGGTCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCGAGATGGAAGGAATCATCATCAAGTCAACATGTTGAATATGATCAGAGGCCTGACATATTCAGGGGAACAATAAGATATGCAAGTGTTCATGCACATTTAGGTCGGACTGGAAGTCGAAGGGATGATCTTGAGTCGTTGGCATACACATTAATATTTCTCATAAAAGGAAGGTTACCCTGGCAGGGGTATCAGGGTGATAACAAGAGTTTCCTTGTATGTAAGAAGAAGATGTCCACATCCCCAGAGTTGATGTGCTGTTTCTGCCCTCCCCCATTTAAACAGTTTCTTGAAGCTGTTACAATTATGAAGTTTGATGAAGAGCCAAACTATGCAAAGTTGATATCCTTTTTTGAAAGCTTGATCGAACCATGTGTTCCGCTAAGACCAATTAGAATTGATGGAGCTCTGAAGGTTGGGCAGAAACGGGGAAGAATTGCACTAAATTTCGAAGATGATGAACAACCGAAGAAGAAAGTCCGATTAGGTAGTCCGGCTACCCAGTGGATTTCAGTGTATAATGCACGCCGTCCCATGAAGCAAAGGAAAAATGGTCCAAAAATTTATATATTGCCTCAATTTGTTTTGGACGGACTGTTTGCTAATTTATGGTGTGTATATTGGTTTATACCTGAACAATGTGAATCAAATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032501 GO:0032922 GO:0036211 GO:0042176 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0065007 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

523

Amino Acids

58.2

Weight (kDa)

9.13

Isoelectric Point (pI)

52.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	149 - 381	3.6e-17	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	150 - 316	1.3e-06	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	260 - 359	3e-09	Fungal protein kinase
DUF7477	PF24289	443 - 488	1.2e-15	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03940 AT5G18190 AT5G18190
fragaria_vesca	FvH4_1g28110 FvH4_1g28110 FvH4_1g28110 FvH4_1g28110
malus_domestica	MD12G1003400.v1.1
prunus_persica	Prupe.7G003800_v2.0.a1
pyrus_communis	pycom12g00290
rosa_chinensis	RchiOBHm_Chr3g0497131
rosa_laevigata	RLG00000022480
rosa_multiflora	Rmu_ssc0000003.1_g000001
rosa_roxburghii	Rroxscaffold_6G00388390
rosa_rugosa	Rorug03G0290200 Rorug03G0290300
rosa_samantha	Rh3AG334300 Rh3BG371400 Rh3CG368300 Rh3DG369300
rosa_wichuraiana	Rw3G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	309
AarI	CACCTGC	2 cut(s)	226, 301
Acc16I	TGCGCA	1 cut(s)	26
Acc36I	ACCTGC	2 cut(s)	226, 301
AccB7I	CCANNNNNTGG	1 cut(s)	717
AccI	GTMKAC	1 cut(s)	615
AccII	CGCG	2 cut(s)	153, 231
AciI	CCGC	9 cut(s)	18, 153, 229, 231, 234, 237, 240, 357, 1295
AclWI	GGATC	1 cut(s)	293
AcoI	YGGCCR	1 cut(s)	481
AcsI	RAATTY	5 cut(s)	730, 847, 1360, 1476, 1564
AcuI	CTGAAG	2 cut(s)	35, 1346
AfaI	GTAC	1 cut(s)	423
AfiI	CCNNNNNNNGG	5 cut(s)	224, 448, 717, 1100, 1101
AflIII	ACRYGT	1 cut(s)	946
AgsI	TTSAA	5 cut(s)	320, 386, 953, 1208, 1271
AhdI	GACNNNNNGTC	1 cut(s)	1029
AjnI	CCWGG	2 cut(s)	865, 1094
AluBI	AGCT	9 cut(s)	140, 161, 176, 374, 805, 875, 1211, 1275, 1322
AluI	AGCT	9 cut(s)	140, 161, 176, 374, 805, 875, 1211, 1275, 1322
Alw21I	GWGCWC	1 cut(s)	1324
Alw26I	GTCTC	1 cut(s)	756
AlwI	GGATC	1 cut(s)	293
AlwNI	CAGNNNCTG	1 cut(s)	110
Ama87I	CYCGRG	1 cut(s)	222
AoxI	GGCC	5 cut(s)	206, 226, 481, 592, 965
ApeKI	GCWGC	6 cut(s)	67, 100, 140, 143, 161, 360
ApoI	RAATTY	5 cut(s)	730, 847, 1360, 1476, 1564
ArsI	GACNNNNNNTTYG	2 cut(s)	1496, 1528
AseI	ATTAAT	1 cut(s)	1067
Asp700I	GAANNNNTTC	1 cut(s)	804
AspLEI	GCGC	3 cut(s)	27, 365, 401
AspS9I	GGNCC	5 cut(s)	207, 530, 593, 707, 1469
AsuHPI	GGTGA	2 cut(s)	180, 1124
AsuII	TTCGAA	2 cut(s)	561, 1365
AvaI	CYCGRG	1 cut(s)	222
AvaII	GGWCC	3 cut(s)	530, 707, 1469
BalI	TGGCCA	1 cut(s)	483
BanII	GRGCYC	1 cut(s)	1324
BbsI	GAAGAC	1 cut(s)	396
Bbv12I	GWGCWC	1 cut(s)	1324
BbvI	GCAGC	6 cut(s)	79, 87, 127, 130, 148, 372
BccI	CCATC	2 cut(s)	915, 1310
BceAI	ACGGC	2 cut(s)	53, 1428
BciT130I	CCWGG	2 cut(s)	867, 1096
BclI	TGATCA	1 cut(s)	958
BcoDI	GTCTC	1 cut(s)	756
BfaI	CTAG	1 cut(s)	797
BfmI	CTRYAG	1 cut(s)	171
BfuAI	ACCTGC	2 cut(s)	226, 301
BglI	GCCNNNNNGGC	1 cut(s)	234
Bme1390I	CCNGG	2 cut(s)	867, 1096
Bme18I	GGWCC	3 cut(s)	530, 707, 1469
BmeRI	GACNNNNNGTC	1 cut(s)	1029
BmeT110I	CYCGRG	1 cut(s)	222
BmgT120I	GGNCC	5 cut(s)	207, 530, 593, 707, 1469
BmiI	GGNNCC	1 cut(s)	709
BmrFI	CCNGG	2 cut(s)	867, 1096
BmrI	ACTGGG	2 cut(s)	705, 1411
BmsI	GCATC	2 cut(s)	526, 923
BmuI	ACTGGG	2 cut(s)	705, 1411
BpiI	GAAGAC	1 cut(s)	396
Bpu14I	TTCGAA	2 cut(s)	561, 1365
BpuEI	CTTGAG	2 cut(s)	187, 1067
BsaJI	CCNNGG	4 cut(s)	229, 647, 670, 1094
BsaXI	ACNNNNNCTCC	2 cut(s)	736, 766
Bsc4I	CCNNNNNNNGG	5 cut(s)	224, 448, 717, 1100, 1101
Bse1I	ACTGG	4 cut(s)	104, 711, 1030, 1417
Bse3DI	GCAATG	3 cut(s)	75, 351, 771
BseBI	CCWGG	2 cut(s)	867, 1096
BseDI	CCNNGG	4 cut(s)	229, 647, 670, 1094
BseGI	GGATG	4 cut(s)	638, 727, 1045, 1154
BseLI	CCNNNNNNNGG	5 cut(s)	224, 448, 717, 1100, 1101
BseMI	GCAATG	3 cut(s)	75, 351, 771
BseMII	CTCAG	2 cut(s)	78, 834
BseNI	ACTGG	4 cut(s)	104, 711, 1030, 1417
BseXI	GCAGC	6 cut(s)	79, 87, 127, 130, 148, 372
Bsh1236I	CGCG	2 cut(s)	153, 231
BshFI	GGCC	5 cut(s)	208, 228, 483, 594, 967
BsiHKAI	GWGCWC	1 cut(s)	1324
BsiHKCI	CYCGRG	1 cut(s)	222
BsiSI	CCGG	2 cut(s)	147, 1409
BslFI	GGGAC	2 cut(s)	693, 1431
BslI	CCNNNNNNNGG	5 cut(s)	224, 448, 717, 1100, 1101
BsmAI	GTCTC	1 cut(s)	756
BsmFI	GGGAC	2 cut(s)	693, 1431
BsnI	GGCC	5 cut(s)	208, 228, 483, 594, 967
BsoBI	CYCGRG	1 cut(s)	222
Bsp119I	TTCGAA	2 cut(s)	561, 1365
Bsp1286I	GDGCHC	1 cut(s)	1324
Bsp143I	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
Bsp19I	CCATGG	1 cut(s)	647
BspACI	CCGC	9 cut(s)	18, 153, 229, 231, 234, 237, 240, 357, 1295
BspANI	GGCC	5 cut(s)	208, 228, 483, 594, 967
BspCNI	CTCAG	2 cut(s)	79, 835
BspFNI	CGCG	2 cut(s)	153, 231
BspLI	GGNNCC	1 cut(s)	709
BspMI	ACCTGC	2 cut(s)	226, 301
BspPI	GGATC	1 cut(s)	293
BspQI	GCTCTTC	1 cut(s)	1230
BspT104I	TTCGAA	2 cut(s)	561, 1365
BsrDI	GCAATG	3 cut(s)	75, 351, 771
BsrI	ACTGG	4 cut(s)	104, 711, 1030, 1417
BssECI	CCNNGG	4 cut(s)	229, 647, 670, 1094
BssMI	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
BssT1I	CCWWGG	2 cut(s)	647, 670
Bst2UI	CCWGG	2 cut(s)	867, 1096
Bst4CI	ACNGT	3 cut(s)	314, 1200, 1512
Bst6I	CTCTTC	2 cut(s)	285, 1230
BstBI	TTCGAA	2 cut(s)	561, 1365
BstC8I	GCNNGC	4 cut(s)	111, 397, 769, 1441
BstDEI	CTNAG	3 cut(s)	87, 843, 1298
BstDSI	CCRYGG	2 cut(s)	229, 647
BstEII	GGTNACC	1 cut(s)	1089
BstENI	CCTNNNNNAGG	1 cut(s)	222
BstF5I	GGATG	4 cut(s)	638, 727, 1045, 1154
BstFNI	CGCG	2 cut(s)	153, 231
BstHHI	GCGC	3 cut(s)	27, 365, 401
BstKTI	GATC	7 cut(s)	32, 49, 301, 904, 961, 1045, 1281
BstMAI	GTCTC	1 cut(s)	756
BstMBI	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
BstNI	CCWGG	2 cut(s)	867, 1096
BstNSI	RCATGY	1 cut(s)	950
BstPI	GGTNACC	1 cut(s)	1089
BstSCI	CCNGG	2 cut(s)	865, 1094
BstSFI	CTRYAG	1 cut(s)	171
BstUI	CGCG	2 cut(s)	153, 231
BstV1I	GCAGC	6 cut(s)	79, 87, 127, 130, 148, 372
BstV2I	GAAGAC	1 cut(s)	396
BsuRI	GGCC	5 cut(s)	208, 228, 483, 594, 967
BtgI	CCRYGG	2 cut(s)	229, 647
BtsCI	GGATG	4 cut(s)	638, 727, 1045, 1154
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	4 cut(s)	111, 783, 1424, 1434
BveI	ACCTGC	2 cut(s)	226, 301
Cac8I	GCNNGC	4 cut(s)	111, 397, 769, 1441
CaiI	CAGNNNCTG	1 cut(s)	110
CfoI	GCGC	3 cut(s)	27, 365, 401
Cfr13I	GGNCC	5 cut(s)	207, 530, 593, 707, 1469
Cfr42I	CCGCGG	1 cut(s)	232
CseI	GACGC	2 cut(s)	159, 401
Csp6I	GTAC	1 cut(s)	422
CviAII	CATG	6 cut(s)	648, 827, 947, 1007, 1287, 1450
CviQI	GTAC	1 cut(s)	422
DdeI	CTNAG	3 cut(s)	87, 843, 1298
DpnI	GATC	7 cut(s)	31, 48, 300, 903, 960, 1044, 1280
DpnII	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
DraI	TTTAAA	2 cut(s)	555, 1195
DriI	GACNNNNNGTC	1 cut(s)	1029
EaeI	YGGCCR	1 cut(s)	481
Eam1104I	CTCTTC	2 cut(s)	285, 1230
Eam1105I	GACNNNNNGTC	1 cut(s)	1029
EarI	CTCTTC	2 cut(s)	285, 1230
Ecl136II	GAGCTC	1 cut(s)	1322
Eco130I	CCWWGG	2 cut(s)	647, 670
Eco147I	AGGCCT	1 cut(s)	967
Eco24I	GRGCYC	1 cut(s)	1324
Eco32I	GATATC	1 cut(s)	1260
Eco47I	GGWCC	3 cut(s)	530, 707, 1469
Eco53kI	GAGCTC	1 cut(s)	1322
Eco57I	CTGAAG	2 cut(s)	35, 1346
Eco88I	CYCGRG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	1089
EcoICRI	GAGCTC	1 cut(s)	1322
EcoNI	CCTNNNNNAGG	1 cut(s)	222
EcoO65I	GGTNACC	1 cut(s)	1089
EcoRI	GAATTC	1 cut(s)	730
EcoRII	CCWGG	2 cut(s)	865, 1094
EcoRV	GATATC	1 cut(s)	1260
EcoT14I	CCWWGG	2 cut(s)	647, 670
EcoT38I	GRGCYC	1 cut(s)	1324
ErhI	CCWWGG	2 cut(s)	647, 670
FaeI	CATG	6 cut(s)	651, 830, 950, 1010, 1290, 1453
FalI	AAGNNNNNCTT	2 cut(s)	461, 493
FaqI	GGGAC	2 cut(s)	693, 1431
FatI	CATG	6 cut(s)	647, 826, 946, 1006, 1286, 1449
FbaI	TGATCA	1 cut(s)	958
FblI	GTMKAC	1 cut(s)	615
FokI	GGATG	4 cut(s)	645, 734, 1052, 1141
FriOI	GRGCYC	1 cut(s)	1324
FspBI	CTAG	1 cut(s)	797
FspI	TGCGCA	1 cut(s)	26
GlaI	GCGC	3 cut(s)	26, 364, 400
HaeIII	GGCC	5 cut(s)	208, 228, 483, 594, 967
HapII	CCGG	2 cut(s)	147, 1409
HgaI	GACGC	2 cut(s)	159, 401
HhaI	GCGC	3 cut(s)	27, 365, 401
Hin1II	CATG	6 cut(s)	651, 830, 950, 1010, 1290, 1453
Hin6I	GCGC	3 cut(s)	25, 363, 399
HinP1I	GCGC	3 cut(s)	25, 363, 399
HincII	GTYRAC	2 cut(s)	863, 944
HindII	GTYRAC	2 cut(s)	863, 944
HindIII	AAGCTT	3 cut(s)	372, 803, 1273
HinfI	GANTC	3 cut(s)	929, 1049, 1559
HpaII	CCGG	2 cut(s)	147, 1409
HphI	GGTGA	2 cut(s)	180, 1124
Hpy166II	GTNNAC	4 cut(s)	616, 863, 944, 1152
Hpy188I	TCNGA	6 cut(s)	744, 756, 963, 1023, 1326, 1397
Hpy188III	TCNNGA	5 cut(s)	413, 797, 918, 1046, 1205
Hpy8I	GTNNAC	4 cut(s)	616, 863, 944, 1152
HpyAV	CCTTC	7 cut(s)	66, 195, 495, 919, 1029, 1080, 1321
HpyCH4III	ACNGT	3 cut(s)	314, 1200, 1512
HpyF3I	CTNAG	3 cut(s)	87, 843, 1298
Hsp92II	CATG	6 cut(s)	651, 830, 950, 1010, 1290, 1453
HspAI	GCGC	3 cut(s)	25, 363, 399
Ksp22I	TGATCA	1 cut(s)	958
KspI	CCGCGG	1 cut(s)	232
Kzo9I	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
LguI	GCTCTTC	1 cut(s)	1230
LmnI	GCTCC	1 cut(s)	1319
Lsp1109I	GCAGC	6 cut(s)	79, 87, 127, 130, 148, 372
LweI	GCATC	2 cut(s)	526, 923
MaeI	CTAG	1 cut(s)	797
MaeIII	GTNAC	3 cut(s)	431, 1089, 1213
MalI	GATC	7 cut(s)	31, 48, 300, 903, 960, 1044, 1280
MboI	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
MhlI	GDGCHC	1 cut(s)	1324
MlsI	TGGCCA	1 cut(s)	483
MluNI	TGGCCA	1 cut(s)	483
MlyI	GAGTC	1 cut(s)	1058
MmeI	TCCRAC	1 cut(s)	1001
Mox20I	TGGCCA	1 cut(s)	483
MroXI	GAANNNNTTC	1 cut(s)	804
MscI	TGGCCA	1 cut(s)	483
MseI	TTAA	3 cut(s)	554, 1067, 1194
MslI	CAYNNNNRTG	3 cut(s)	776, 831, 919
Msp20I	TGGCCA	1 cut(s)	483
MspA1I	CMGCKG	2 cut(s)	231, 875
MspI	CCGG	2 cut(s)	147, 1409
MspR9I	CCNGG	2 cut(s)	867, 1096
MvaI	CCWGG	2 cut(s)	867, 1096
MvnI	CGCG	2 cut(s)	153, 231
NcoI	CCATGG	1 cut(s)	647
NdeII	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
NlaIII	CATG	6 cut(s)	651, 830, 950, 1010, 1290, 1453
NlaIV	GGNNCC	1 cut(s)	709
NsbI	TGCGCA	1 cut(s)	26
NspI	RCATGY	1 cut(s)	950
NspV	TTCGAA	2 cut(s)	561, 1365
PaeR7I	CTCGAG	1 cut(s)	222
PaqCI	CACCTGC	2 cut(s)	226, 301
PceI	AGGCCT	1 cut(s)	967
PciI	ACATGT	1 cut(s)	946
PciSI	GCTCTTC	1 cut(s)	1230
PcsI	WCGNNNNNNNCGW	1 cut(s)	752
PdmI	GAANNNNTTC	1 cut(s)	804
PfeI	GAWTC	2 cut(s)	929, 1559
PflFI	GACNNNGTC	1 cut(s)	748
PflMI	CCANNNNNTGG	1 cut(s)	717
PleI	GAGTC	1 cut(s)	1057
PpsI	GAGTC	1 cut(s)	1057
PscI	ACATGT	1 cut(s)	946
PshBI	ATTAAT	1 cut(s)	1067
PsiI	TTATAA	1 cut(s)	309
Psp124BI	GAGCTC	1 cut(s)	1324
Psp6I	CCWGG	2 cut(s)	865, 1094
PspEI	GGTNACC	1 cut(s)	1089
PspGI	CCWGG	2 cut(s)	865, 1094
PspN4I	GGNNCC	1 cut(s)	709
PspPI	GGNCC	5 cut(s)	207, 530, 593, 707, 1469
PspXI	VCTCGAGB	1 cut(s)	222
PstNI	CAGNNNCTG	1 cut(s)	110
PsyI	GACNNNGTC	1 cut(s)	748
PvuII	CAGCTG	1 cut(s)	875
RsaI	GTAC	1 cut(s)	423
RsaNI	GTAC	1 cut(s)	422
RseI	CAYNNNNRTG	3 cut(s)	776, 831, 919
SacI	GAGCTC	1 cut(s)	1324
SacII	CCGCGG	1 cut(s)	232
SapI	GCTCTTC	1 cut(s)	1230
SaqAI	TTAA	3 cut(s)	554, 1067, 1194
Sau3AI	GATC	7 cut(s)	29, 46, 298, 901, 958, 1042, 1278
Sau96I	GGNCC	5 cut(s)	207, 530, 593, 707, 1469
SchI	GAGTC	1 cut(s)	1058
ScrFI	CCNGG	2 cut(s)	867, 1096
SduI	GDGCHC	1 cut(s)	1324
SfaNI	GCATC	2 cut(s)	526, 923
SfcI	CTRYAG	1 cut(s)	171
Sfr274I	CTCGAG	1 cut(s)	222
Sfr303I	CCGCGG	1 cut(s)	232
SfuI	TTCGAA	2 cut(s)	561, 1365
SgrBI	CCGCGG	1 cut(s)	232
SinI	GGWCC	3 cut(s)	530, 707, 1469
SlaI	CTCGAG	1 cut(s)	222
SmiMI	CAYNNNNRTG	3 cut(s)	776, 831, 919
SmlI	CTYRAG	3 cut(s)	202, 222, 1046
SmoI	CTYRAG	3 cut(s)	202, 222, 1046
SseBI	AGGCCT	1 cut(s)	967
SsiI	CCGC	9 cut(s)	18, 153, 229, 231, 234, 237, 240, 357, 1295
SspI	AATATT	1 cut(s)	1071
SspMI	CTAG	1 cut(s)	797
SstI	GAGCTC	1 cut(s)	1324
StuI	AGGCCT	1 cut(s)	967
StyD4I	CCNGG	2 cut(s)	865, 1094
StyI	CCWWGG	2 cut(s)	647, 670
TaaI	ACNGT	3 cut(s)	314, 1200, 1512
TaqI	TCGA	6 cut(s)	223, 561, 917, 1033, 1281, 1365
TauI	GCSGC	6 cut(s)	231, 234, 237, 240, 243, 360
TfiI	GAWTC	2 cut(s)	929, 1559
Tru1I	TTAA	3 cut(s)	554, 1067, 1194
Tru9I	TTAA	3 cut(s)	554, 1067, 1194
TscAI	CASTG	4 cut(s)	111, 783, 1424, 1434
TseI	GCWGC	6 cut(s)	67, 100, 140, 143, 161, 360
TspDTI	ATGAA	6 cut(s)	644, 995, 1238, 1248, 1389, 1466
TspGWI	ACGGA	1 cut(s)	1521
TspRI	CASTG	4 cut(s)	111, 783, 1424, 1434
Tth111I	GACNNNGTC	1 cut(s)	748
Van91I	CCANNNNNTGG	1 cut(s)	717
VpaK11BI	GGWCC	3 cut(s)	530, 707, 1469
VspI	ATTAAT	1 cut(s)	1067
XagI	CCTNNNNNAGG	1 cut(s)	222
XapI	RAATTY	5 cut(s)	730, 847, 1360, 1476, 1564
XbaI	TCTAGA	1 cut(s)	796
XceI	RCATGY	1 cut(s)	950
XcmI	CCANNNNNNNNNTGG	1 cut(s)	491
XhoI	CTCGAG	1 cut(s)	222
XmiI	GTMKAC	1 cut(s)	615
XmnI	GAANNNNTTC	1 cut(s)	804
XspI	CTAG	1 cut(s)	797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.