Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0009781

Physical Location & Seq

Genomic Coordinates Reverse (-)

46731357 .. 46738491

Gene Structure 7135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG369300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGCCAGAGTTGCGAAGCGGAGTGCGCAGATCAAAACGGCTTGATGATCTTCAGCCTTCCTCACAGCAGCAACCCATTGCTCAACCTGAGAATTGTCTGCTGCCAGTGCCTGCCCACAATAATAAACCTCGAAGGAGAGCTGCTGCCGGACGCGGTAGAGCTGCTAATGCTGTAGCCAAAGCACCTTCACCAGCAATACCCTCAAGGCCCACCCCACCTGCTCGAGGCCGCGGCGCCGTTAGGTTGATTGATTTAGACCCTGAACCTTGCCCTCTTCTTCCTCCACCTGCCGATCCCATTTATAACCGTGTTCAAGTTGTAGCCGATAAAGATATTGCAATGGAGGGTGGCGGCAGCGCAGACAAAGCTTTGGCAGTTGAAGAAGACGCAGGCGCAACTCCCGTTCCTGATAGGGTACAAGTGGGTAACTCTCCCCAATACAAGGTAGAAAGGAAGTTAGGTAAGGGTGGCTTTGGCCAAGTGTATGTTGGCAGAAGGGTTAGTGGTGGAACAGACAGGACAGGACCAGATGCAATAGAGGTCGCTTTAAAGTTCGAACACAGAAATAGTAAAGGTTGCAATTATGGCCCTCCTTATGAGTGGCAAGTCTACAATACTCTAAATGGATGTTATGGAGTTCCATGGGTTCATTACAAGGGTCGCCAAGGGGATTTTTACATTCTGGTAATGGACATTCTTGGTCCCAGTCTATGGGATGTATGGAATTCTCTTGGTCAGACGATGTCTCCGAATATGGTGGCGTGCATCGCAGTGGAGGCAATATCAATTCTAGAAAAGCTTCACTCAAAAGGGTTTGTGCATGGAGATGTAAAACCTGAGAATTTCTTACTTGGTCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCGAGATGGAAGGAATCATCATCAAGTCAACATGTTGAATATGATCAGAGGCCTGACATATTCAGGGGGACAATAAGATATGCAAGTGTTCATGCACATTTAGGTCGGACTGGAAGTCGAAGGGACGATCTTGAGTCGTTGGCATACACATTAATATTTCTCATAAAAGGAAGGTTACCCTGGCAGGGGTATCAGGGTGATAACAAGAGTTTCCTTGTATGTAAGAAGAAGATGTCCACATCCCCAGAGTTGATGTGCTGTTTCTGCCCTCCCCCATTTAAACAGTTTCTTGAAGCTGTTACAATTATGAAGTTTGATGAAGAGCCAAACTATGCAAAGTTGATATCCTTTTTTGAAAGCTTGATCGAACCATGTGTTCCGCTAAGACCAATTAGAATTGATGGAGCTCTGAAGGTTGGGCAGAAACGGGGAAGAATTGCACTAAATTTCGAAGATGATGAACAACCGAAGAAGAAAGTCCGATTAGGTAGTCCGGCTACCCAGTGGATTTCAGTGTATAATGCACGCCGTCCCATGAAGCAAAGGTTAGTTATACACGTATTCAATTTCATACTCTATTTAATTGTGCAGCAAAAAATTCCTACCTCCCTTTGTTTTATGCTTTTCTTATTCATCAACTTCTTTTCTGAAAAAATCTGCATGGGAACTTGTTGGTTTATCAGCTGCAGTATATTATGTTTTTACAAAATTTTGAATCTGGTCCCAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032501 GO:0032922 GO:0036211 GO:0042176 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0065007 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

546

Amino Acids

61.06

Weight (kDa)

9.23

Isoelectric Point (pI)

53.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	147 - 379	4.2e-17	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	148 - 314	1.2e-06	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	258 - 357	3.3e-09	Fungal protein kinase
DUF7477	PF24289	441 - 495	1.4e-16	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03940 AT5G18190 AT5G18190
fragaria_vesca	FvH4_1g28110 FvH4_1g28110 FvH4_1g28110 FvH4_1g28110
malus_domestica	MD12G1003400.v1.1
prunus_persica	Prupe.7G003800_v2.0.a1
pyrus_communis	pycom12g00290
rosa_chinensis	RchiOBHm_Chr3g0497131
rosa_laevigata	RLG00000022480
rosa_multiflora	Rmu_ssc0000003.1_g000001
rosa_roxburghii	Rroxscaffold_6G00388390
rosa_rugosa	Rorug03G0290200 Rorug03G0290300
rosa_samantha	Rh3AG334300 Rh3BG371400 Rh3CG368300 Rh3DG369300
rosa_wichuraiana	Rw3G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	303
AarI	CACCTGC	2 cut(s)	226, 295
Acc16I	TGCGCA	1 cut(s)	26
Acc36I	ACCTGC	2 cut(s)	226, 295
AccB1I	GGYRCC	1 cut(s)	233
AccB7I	CCANNNNNTGG	1 cut(s)	711
AccI	GTMKAC	1 cut(s)	609
AccII	CGCG	2 cut(s)	153, 231
AciI	CCGC	6 cut(s)	18, 153, 229, 231, 351, 1289
AclWI	GGATC	1 cut(s)	287
AcoI	YGGCCR	1 cut(s)	475
AcsI	RAATTY	5 cut(s)	724, 841, 1354, 1506, 1617
AcuI	CTGAAG	2 cut(s)	35, 1340
AcyI	GRCGYC	1 cut(s)	234
AfaI	GTAC	1 cut(s)	417
AfiI	CCNNNNNNNGG	5 cut(s)	224, 442, 711, 1094, 1095
AflIII	ACRYGT	2 cut(s)	940, 1465
AgsI	TTSAA	7 cut(s)	314, 380, 947, 1202, 1265, 1474, 1624
AhdI	GACNNNNNGTC	1 cut(s)	1023
AjnI	CCWGG	2 cut(s)	859, 1088
AluBI	AGCT	9 cut(s)	140, 161, 368, 799, 869, 1205, 1269, 1316, 1593
AluI	AGCT	9 cut(s)	140, 161, 368, 799, 869, 1205, 1269, 1316, 1593
Alw21I	GWGCWC	1 cut(s)	1318
Alw26I	GTCTC	1 cut(s)	750
AlwI	GGATC	1 cut(s)	287
AlwNI	CAGNNNCTG	1 cut(s)	110
Ama87I	CYCGRG	1 cut(s)	222
AoxI	GGCC	5 cut(s)	206, 226, 475, 586, 959
ApeKI	GCWGC	8 cut(s)	67, 100, 140, 143, 161, 354, 1498, 1593
ApoI	RAATTY	5 cut(s)	724, 841, 1354, 1506, 1617
AseI	ATTAAT	1 cut(s)	1061
Asp700I	GAANNNNTTC	1 cut(s)	798
AspLEI	GCGC	4 cut(s)	27, 236, 359, 395
AspS9I	GGNCC	5 cut(s)	207, 524, 587, 701, 1630
AsuHPI	GGTGA	2 cut(s)	180, 1118
AsuII	TTCGAA	2 cut(s)	555, 1359
AvaI	CYCGRG	1 cut(s)	222
AvaII	GGWCC	3 cut(s)	524, 701, 1630
BalI	TGGCCA	1 cut(s)	477
BanI	GGYRCC	1 cut(s)	233
BanII	GRGCYC	1 cut(s)	1318
BbsI	GAAGAC	1 cut(s)	390
Bbv12I	GWGCWC	1 cut(s)	1318
BbvI	GCAGC	8 cut(s)	79, 87, 127, 130, 148, 366, 1510, 1580
BccI	CCATC	2 cut(s)	909, 1304
BceAI	ACGGC	3 cut(s)	53, 221, 1422
BciT130I	CCWGG	2 cut(s)	861, 1090
BclI	TGATCA	1 cut(s)	952
BcoDI	GTCTC	1 cut(s)	750
BfaI	CTAG	1 cut(s)	791
BfmI	CTRYAG	2 cut(s)	171, 1594
BfoI	RGCGCY	1 cut(s)	237
BfuAI	ACCTGC	2 cut(s)	226, 295
Bme1390I	CCNGG	2 cut(s)	861, 1090
Bme18I	GGWCC	3 cut(s)	524, 701, 1630
BmeRI	GACNNNNNGTC	1 cut(s)	1023
BmeT110I	CYCGRG	1 cut(s)	222
BmgT120I	GGNCC	5 cut(s)	207, 524, 587, 701, 1630
BmiI	GGNNCC	3 cut(s)	235, 703, 1632
BmrFI	CCNGG	2 cut(s)	861, 1090
BmrI	ACTGGG	2 cut(s)	699, 1405
BmsI	GCATC	3 cut(s)	520, 774, 917
BmuI	ACTGGG	2 cut(s)	699, 1405
BpiI	GAAGAC	1 cut(s)	390
Bpu14I	TTCGAA	2 cut(s)	555, 1359
BpuEI	CTTGAG	2 cut(s)	187, 1061
BsaAI	YACGTR	1 cut(s)	1468
BsaHI	GRCGYC	1 cut(s)	234
BsaJI	CCNNGG	4 cut(s)	229, 641, 664, 1088
BsaXI	ACNNNNNCTCC	2 cut(s)	730, 760
Bsc4I	CCNNNNNNNGG	5 cut(s)	224, 442, 711, 1094, 1095
Bse1I	ACTGG	4 cut(s)	104, 705, 1024, 1411
Bse3DI	GCAATG	2 cut(s)	75, 345
BseBI	CCWGG	2 cut(s)	861, 1090
BseDI	CCNNGG	4 cut(s)	229, 641, 664, 1088
BseGI	GGATG	3 cut(s)	632, 721, 1148
BseLI	CCNNNNNNNGG	5 cut(s)	224, 442, 711, 1094, 1095
BseMI	GCAATG	2 cut(s)	75, 345
BseMII	CTCAG	2 cut(s)	78, 828
BseNI	ACTGG	4 cut(s)	104, 705, 1024, 1411
BseXI	GCAGC	8 cut(s)	79, 87, 127, 130, 148, 366, 1510, 1580
BsgI	GTGCAG	1 cut(s)	1517
Bsh1236I	CGCG	2 cut(s)	153, 231
BshFI	GGCC	5 cut(s)	208, 228, 477, 588, 961
BshNI	GGYRCC	1 cut(s)	233
BsiHKAI	GWGCWC	1 cut(s)	1318
BsiHKCI	CYCGRG	1 cut(s)	222
BsiSI	CCGG	2 cut(s)	147, 1403
BslFI	GGGAC	5 cut(s)	687, 991, 1046, 1425, 1616
BslI	CCNNNNNNNGG	5 cut(s)	224, 442, 711, 1094, 1095
BsmAI	GTCTC	1 cut(s)	750
BsmFI	GGGAC	5 cut(s)	687, 991, 1046, 1425, 1616
BsnI	GGCC	5 cut(s)	208, 228, 477, 588, 961
BsoBI	CYCGRG	1 cut(s)	222
Bsp119I	TTCGAA	2 cut(s)	555, 1359
Bsp1286I	GDGCHC	1 cut(s)	1318
Bsp143I	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
Bsp19I	CCATGG	1 cut(s)	641
BspACI	CCGC	6 cut(s)	18, 153, 229, 231, 351, 1289
BspANI	GGCC	5 cut(s)	208, 228, 477, 588, 961
BspCNI	CTCAG	2 cut(s)	79, 829
BspFNI	CGCG	2 cut(s)	153, 231
BspLI	GGNNCC	3 cut(s)	235, 703, 1632
BspMAI	CTGCAG	1 cut(s)	1598
BspMI	ACCTGC	2 cut(s)	226, 295
BspPI	GGATC	1 cut(s)	287
BspQI	GCTCTTC	1 cut(s)	1224
BspT104I	TTCGAA	2 cut(s)	555, 1359
BspT107I	GGYRCC	1 cut(s)	233
BsrDI	GCAATG	2 cut(s)	75, 345
BsrI	ACTGG	4 cut(s)	104, 705, 1024, 1411
BssECI	CCNNGG	4 cut(s)	229, 641, 664, 1088
BssMI	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	2 cut(s)	641, 664
Bst2UI	CCWGG	2 cut(s)	861, 1090
Bst4CI	ACNGT	2 cut(s)	308, 1194
Bst6I	CTCTTC	2 cut(s)	279, 1224
BstACI	GRCGYC	1 cut(s)	234
BstBAI	YACGTR	1 cut(s)	1468
BstBI	TTCGAA	2 cut(s)	555, 1359
BstC8I	GCNNGC	4 cut(s)	111, 391, 763, 1435
BstDEI	CTNAG	3 cut(s)	87, 837, 1292
BstDSI	CCRYGG	2 cut(s)	229, 641
BstEII	GGTNACC	1 cut(s)	1083
BstENI	CCTNNNNNAGG	1 cut(s)	222
BstF5I	GGATG	3 cut(s)	632, 721, 1148
BstFNI	CGCG	2 cut(s)	153, 231
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	4 cut(s)	27, 236, 359, 395
BstKTI	GATC	7 cut(s)	32, 49, 295, 898, 955, 1039, 1275
BstMAI	GTCTC	1 cut(s)	750
BstMBI	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 24, 106, 167, 365, 585, 767, 776, 1173
BstNI	CCWGG	2 cut(s)	861, 1090
BstNSI	RCATGY	1 cut(s)	944
BstPI	GGTNACC	1 cut(s)	1083
BstSCI	CCNGG	2 cut(s)	859, 1088
BstSFI	CTRYAG	2 cut(s)	171, 1594
BstUI	CGCG	2 cut(s)	153, 231
BstV1I	GCAGC	8 cut(s)	79, 87, 127, 130, 148, 366, 1510, 1580
BstV2I	GAAGAC	1 cut(s)	390
BsuRI	GGCC	5 cut(s)	208, 228, 477, 588, 961
BtgI	CCRYGG	2 cut(s)	229, 641
BtgZI	GCGATG	1 cut(s)	751
BtsCI	GGATG	3 cut(s)	632, 721, 1148
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	4 cut(s)	111, 777, 1418, 1428
BveI	ACCTGC	2 cut(s)	226, 295
Cac8I	GCNNGC	4 cut(s)	111, 391, 763, 1435
CaiI	CAGNNNCTG	1 cut(s)	110
CfoI	GCGC	4 cut(s)	27, 236, 359, 395
Cfr13I	GGNCC	5 cut(s)	207, 524, 587, 701, 1630
Cfr42I	CCGCGG	1 cut(s)	232
CseI	GACGC	2 cut(s)	159, 395
Csp6I	GTAC	1 cut(s)	416
CviAII	CATG	7 cut(s)	642, 821, 941, 1001, 1281, 1444, 1570
CviQI	GTAC	1 cut(s)	416
DdeI	CTNAG	3 cut(s)	87, 837, 1292
DinI	GGCGCC	1 cut(s)	235
DpnI	GATC	7 cut(s)	31, 48, 294, 897, 954, 1038, 1274
DpnII	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
DraI	TTTAAA	2 cut(s)	549, 1189
DriI	GACNNNNNGTC	1 cut(s)	1023
EaeI	YGGCCR	1 cut(s)	475
Eam1104I	CTCTTC	2 cut(s)	279, 1224
Eam1105I	GACNNNNNGTC	1 cut(s)	1023
EarI	CTCTTC	2 cut(s)	279, 1224
Ecl136II	GAGCTC	1 cut(s)	1316
Eco130I	CCWWGG	2 cut(s)	641, 664
Eco147I	AGGCCT	1 cut(s)	961
Eco24I	GRGCYC	1 cut(s)	1318
Eco32I	GATATC	1 cut(s)	1254
Eco47I	GGWCC	3 cut(s)	524, 701, 1630
Eco53kI	GAGCTC	1 cut(s)	1316
Eco57I	CTGAAG	2 cut(s)	35, 1340
Eco88I	CYCGRG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	1316
EcoNI	CCTNNNNNAGG	1 cut(s)	222
EcoO65I	GGTNACC	1 cut(s)	1083
EcoRI	GAATTC	1 cut(s)	724
EcoRII	CCWGG	2 cut(s)	859, 1088
EcoRV	GATATC	1 cut(s)	1254
EcoT14I	CCWWGG	2 cut(s)	641, 664
EcoT38I	GRGCYC	1 cut(s)	1318
EgeI	GGCGCC	1 cut(s)	235
EheI	GGCGCC	1 cut(s)	235
ErhI	CCWWGG	2 cut(s)	641, 664
FaeI	CATG	7 cut(s)	645, 824, 944, 1004, 1284, 1447, 1573
FalI	AAGNNNNNCTT	2 cut(s)	455, 487
FaqI	GGGAC	5 cut(s)	687, 991, 1046, 1425, 1616
FatI	CATG	7 cut(s)	641, 820, 940, 1000, 1280, 1443, 1569
FbaI	TGATCA	1 cut(s)	952
FblI	GTMKAC	1 cut(s)	609
FokI	GGATG	3 cut(s)	639, 728, 1135
FriOI	GRGCYC	1 cut(s)	1318
FspBI	CTAG	1 cut(s)	791
FspI	TGCGCA	1 cut(s)	26
GlaI	GCGC	4 cut(s)	26, 235, 358, 394
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	5 cut(s)	208, 228, 477, 588, 961
HapII	CCGG	2 cut(s)	147, 1403
HgaI	GACGC	2 cut(s)	159, 395
HhaI	GCGC	4 cut(s)	27, 236, 359, 395
Hin1I	GRCGYC	1 cut(s)	234
Hin1II	CATG	7 cut(s)	645, 824, 944, 1004, 1284, 1447, 1573
Hin6I	GCGC	4 cut(s)	25, 234, 357, 393
HinP1I	GCGC	4 cut(s)	25, 234, 357, 393
HincII	GTYRAC	2 cut(s)	857, 938
HindII	GTYRAC	2 cut(s)	857, 938
HindIII	AAGCTT	3 cut(s)	366, 797, 1267
HinfI	GANTC	3 cut(s)	923, 1043, 1624
HpaII	CCGG	2 cut(s)	147, 1403
HphI	GGTGA	2 cut(s)	180, 1118
Hpy166II	GTNNAC	4 cut(s)	610, 857, 938, 1146
Hpy188I	TCNGA	7 cut(s)	738, 750, 957, 1017, 1320, 1391, 1558
Hpy188III	TCNNGA	5 cut(s)	407, 791, 912, 1040, 1199
Hpy8I	GTNNAC	4 cut(s)	610, 857, 938, 1146
HpyAV	CCTTC	8 cut(s)	66, 126, 195, 489, 913, 1023, 1074, 1315
HpyCH4III	ACNGT	2 cut(s)	308, 1194
HpyCH4IV	ACGT	1 cut(s)	1467
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 24, 106, 167, 365, 585, 767, 776, 1173
HpyF3I	CTNAG	3 cut(s)	87, 837, 1292
HpySE526I	ACGT	1 cut(s)	1467
Hsp92I	GRCGYC	1 cut(s)	234
Hsp92II	CATG	7 cut(s)	645, 824, 944, 1004, 1284, 1447, 1573
HspAI	GCGC	4 cut(s)	25, 234, 357, 393
KasI	GGCGCC	1 cut(s)	233
Ksp22I	TGATCA	1 cut(s)	952
KspI	CCGCGG	1 cut(s)	232
Kzo9I	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
LguI	GCTCTTC	1 cut(s)	1224
LmnI	GCTCC	1 cut(s)	1313
Lsp1109I	GCAGC	8 cut(s)	79, 87, 127, 130, 148, 366, 1510, 1580
LweI	GCATC	3 cut(s)	520, 774, 917
MaeI	CTAG	1 cut(s)	791
MaeII	ACGT	1 cut(s)	1467
MaeIII	GTNAC	3 cut(s)	425, 1083, 1207
MalI	GATC	7 cut(s)	31, 48, 294, 897, 954, 1038, 1274
MboI	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
MhlI	GDGCHC	1 cut(s)	1318
MlsI	TGGCCA	1 cut(s)	477
MluNI	TGGCCA	1 cut(s)	477
Mly113I	GGCGCC	1 cut(s)	234
MlyI	GAGTC	1 cut(s)	1052
MmeI	TCCRAC	1 cut(s)	995
Mox20I	TGGCCA	1 cut(s)	477
MroXI	GAANNNNTTC	1 cut(s)	798
MscI	TGGCCA	1 cut(s)	477
MseI	TTAA	4 cut(s)	548, 1061, 1188, 1490
MslI	CAYNNNNRTG	3 cut(s)	770, 825, 913
Msp20I	TGGCCA	1 cut(s)	477
MspA1I	CMGCKG	3 cut(s)	231, 869, 1593
MspI	CCGG	2 cut(s)	147, 1403
MspR9I	CCNGG	2 cut(s)	861, 1090
MvaI	CCWGG	2 cut(s)	861, 1090
MvnI	CGCG	2 cut(s)	153, 231
MwoI	GCNNNNNNNGC	9 cut(s)	10, 24, 106, 167, 365, 585, 767, 776, 1173
NarI	GGCGCC	1 cut(s)	234
NcoI	CCATGG	1 cut(s)	641
NdeII	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
NlaIII	CATG	7 cut(s)	645, 824, 944, 1004, 1284, 1447, 1573
NlaIV	GGNNCC	3 cut(s)	235, 703, 1632
NsbI	TGCGCA	1 cut(s)	26
NspI	RCATGY	1 cut(s)	944
NspV	TTCGAA	2 cut(s)	555, 1359
PaeR7I	CTCGAG	1 cut(s)	222
PaqCI	CACCTGC	2 cut(s)	226, 295
PceI	AGGCCT	1 cut(s)	961
PciI	ACATGT	1 cut(s)	940
PciSI	GCTCTTC	1 cut(s)	1224
PcsI	WCGNNNNNNNCGW	1 cut(s)	746
PdmI	GAANNNNTTC	1 cut(s)	798
PfeI	GAWTC	2 cut(s)	923, 1624
PflFI	GACNNNGTC	1 cut(s)	742
PflMI	CCANNNNNTGG	1 cut(s)	711
PleI	GAGTC	1 cut(s)	1051
PluTI	GGCGCC	1 cut(s)	237
PpsI	GAGTC	1 cut(s)	1051
Ppu21I	YACGTR	1 cut(s)	1468
PscI	ACATGT	1 cut(s)	940
PshBI	ATTAAT	1 cut(s)	1061
PsiI	TTATAA	1 cut(s)	303
Psp124BI	GAGCTC	1 cut(s)	1318
Psp6I	CCWGG	2 cut(s)	859, 1088
PspEI	GGTNACC	1 cut(s)	1083
PspGI	CCWGG	2 cut(s)	859, 1088
PspN4I	GGNNCC	3 cut(s)	235, 703, 1632
PspPI	GGNCC	5 cut(s)	207, 524, 587, 701, 1630
PspXI	VCTCGAGB	1 cut(s)	222
PstI	CTGCAG	1 cut(s)	1598
PstNI	CAGNNNCTG	1 cut(s)	110
PsyI	GACNNNGTC	1 cut(s)	742
PvuII	CAGCTG	2 cut(s)	869, 1593
RsaI	GTAC	1 cut(s)	417
RsaNI	GTAC	1 cut(s)	416
RseI	CAYNNNNRTG	3 cut(s)	770, 825, 913
SacI	GAGCTC	1 cut(s)	1318
SacII	CCGCGG	1 cut(s)	232
SapI	GCTCTTC	1 cut(s)	1224
SaqAI	TTAA	4 cut(s)	548, 1061, 1188, 1490
Sau3AI	GATC	7 cut(s)	29, 46, 292, 895, 952, 1036, 1272
Sau96I	GGNCC	5 cut(s)	207, 524, 587, 701, 1630
SchI	GAGTC	1 cut(s)	1052
ScrFI	CCNGG	2 cut(s)	861, 1090
SduI	GDGCHC	1 cut(s)	1318
SfaNI	GCATC	3 cut(s)	520, 774, 917
SfcI	CTRYAG	2 cut(s)	171, 1594
SfoI	GGCGCC	1 cut(s)	235
Sfr274I	CTCGAG	1 cut(s)	222
Sfr303I	CCGCGG	1 cut(s)	232
SfuI	TTCGAA	2 cut(s)	555, 1359
SgrBI	CCGCGG	1 cut(s)	232
SinI	GGWCC	3 cut(s)	524, 701, 1630
SlaI	CTCGAG	1 cut(s)	222
SmiMI	CAYNNNNRTG	3 cut(s)	770, 825, 913
SmlI	CTYRAG	3 cut(s)	202, 222, 1040
SmoI	CTYRAG	3 cut(s)	202, 222, 1040
SseBI	AGGCCT	1 cut(s)	961
SsiI	CCGC	6 cut(s)	18, 153, 229, 231, 351, 1289
SspDI	GGCGCC	1 cut(s)	233
SspI	AATATT	1 cut(s)	1065
SspMI	CTAG	1 cut(s)	791
SstI	GAGCTC	1 cut(s)	1318
StuI	AGGCCT	1 cut(s)	961
StyD4I	CCNGG	2 cut(s)	859, 1088
StyI	CCWWGG	2 cut(s)	641, 664
TaaI	ACNGT	2 cut(s)	308, 1194
TaiI	ACGT	1 cut(s)	1470
TaqI	TCGA	7 cut(s)	130, 223, 555, 911, 1027, 1275, 1359
TauI	GCSGC	3 cut(s)	231, 234, 354
TfiI	GAWTC	2 cut(s)	923, 1624
Tru1I	TTAA	4 cut(s)	548, 1061, 1188, 1490
Tru9I	TTAA	4 cut(s)	548, 1061, 1188, 1490
TscAI	CASTG	4 cut(s)	111, 777, 1418, 1428
TseI	GCWGC	8 cut(s)	67, 100, 140, 143, 161, 354, 1498, 1593
TspDTI	ATGAA	8 cut(s)	638, 989, 1232, 1242, 1383, 1460, 1468, 1531
TspRI	CASTG	4 cut(s)	111, 777, 1418, 1428
Tth111I	GACNNNGTC	1 cut(s)	742
Van91I	CCANNNNNTGG	1 cut(s)	711
VpaK11BI	GGWCC	3 cut(s)	524, 701, 1630
VspI	ATTAAT	1 cut(s)	1061
XagI	CCTNNNNNAGG	1 cut(s)	222
XapI	RAATTY	5 cut(s)	724, 841, 1354, 1506, 1617
XbaI	TCTAGA	1 cut(s)	790
XceI	RCATGY	1 cut(s)	944
XcmI	CCANNNNNNNNNTGG	1 cut(s)	485
XhoI	CTCGAG	1 cut(s)	222
XmiI	GTMKAC	1 cut(s)	609
XmnI	GAANNNNTTC	1 cut(s)	798
XspI	CTAG	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.