Protein kinase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03940 AT5G18190 AT5G18190 |
| fragaria_vesca | FvH4_1g28110 FvH4_1g28110 FvH4_1g28110 FvH4_1g28110 |
| malus_domestica | MD12G1003400.v1.1 |
| prunus_persica | Prupe.7G003800_v2.0.a1 |
| pyrus_communis | pycom12g00290 |
| rosa_chinensis | RchiOBHm_Chr3g0497131 |
| rosa_laevigata | RLG00000022480 |
| rosa_multiflora | Rmu_ssc0000003.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00388390 |
| rosa_rugosa | Rorug03G0290200 Rorug03G0290300 |
| rosa_samantha | Rh3AG334300 Rh3BG371400 Rh3CG368300 Rh3DG369300 |
| rosa_wichuraiana | Rw3G029350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1025 |
| Acc16I | TGCGCA | 1 cut(s) | 957 |
| AccB1I | GGYRCC | 1 cut(s) | 185 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 170, 663 |
| AccI | GTMKAC | 2 cut(s) | 249, 1867 |
| AccII | CGCG | 2 cut(s) | 126, 183 |
| AclWI | GGATC | 3 cut(s) | 236, 889, 1595 |
| AcoI | YGGCCR | 1 cut(s) | 427 |
| AcsI | RAATTY | 4 cut(s) | 676, 793, 1306, 1609 |
| AcuI | CTGAAG | 2 cut(s) | 35, 1292 |
| AfaI | GTAC | 5 cut(s) | 24, 369, 563, 1675, 1990 |
| AflIII | ACRYGT | 2 cut(s) | 892, 1444 |
| AgsI | TTSAA | 8 cut(s) | 332, 502, 899, 1154, 1229, 1431, 1626, 1723 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 975 |
| AjiI | CACGTC | 2 cut(s) | 1388, 1764 |
| AjnI | CCWGG | 3 cut(s) | 811, 1040, 1545 |
| Alw21I | GWGCWC | 1 cut(s) | 1270 |
| Alw26I | GTCTC | 3 cut(s) | 702, 1964, 1973 |
| AlwI | GGATC | 3 cut(s) | 236, 889, 1595 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 170, 245, 479 |
| AoxI | GGCC | 4 cut(s) | 178, 427, 538, 911 |
| ApoI | RAATTY | 4 cut(s) | 676, 793, 1306, 1609 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 2055 |
| AseI | ATTAAT | 1 cut(s) | 1013 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 750, 1713 |
| AspLEI | GCGC | 3 cut(s) | 311, 958, 1440 |
| AspS9I | GGNCC | 5 cut(s) | 155, 476, 539, 653, 2028 |
| AsuHPI | GGTGA | 2 cut(s) | 649, 1070 |
| AsuII | TTCGAA | 1 cut(s) | 507 |
| AvaII | GGWCC | 4 cut(s) | 155, 476, 653, 2028 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 931, 964 |
| BalI | TGGCCA | 1 cut(s) | 429 |
| BanI | GGYRCC | 1 cut(s) | 185 |
| BanII | GRGCYC | 2 cut(s) | 1270, 1513 |
| BbsI | GAAGAC | 2 cut(s) | 1320, 1561 |
| Bbv12I | GWGCWC | 1 cut(s) | 1270 |
| BccI | CCATC | 6 cut(s) | 634, 861, 1256, 1291, 1460, 1872 |
| BceAI | ACGGC | 3 cut(s) | 53, 185, 834 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 947, 981 |
| BciT130I | CCWGG | 3 cut(s) | 813, 1042, 1547 |
| BclI | TGATCA | 3 cut(s) | 904, 1825, 1921 |
| BcoDI | GTCTC | 3 cut(s) | 702, 1964, 1973 |
| BfaI | CTAG | 1 cut(s) | 743 |
| BfmI | CTRYAG | 4 cut(s) | 144, 237, 1485, 1494 |
| Bme1390I | CCNGG | 3 cut(s) | 813, 1042, 1547 |
| Bme18I | GGWCC | 4 cut(s) | 155, 476, 653, 2028 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 975 |
| BmgBI | CACGTC | 2 cut(s) | 1388, 1764 |
| BmgT120I | GGNCC | 5 cut(s) | 155, 476, 539, 653, 2028 |
| BmiI | GGNNCC | 2 cut(s) | 187, 655 |
| BmrFI | CCNGG | 3 cut(s) | 813, 1042, 1547 |
| BmrI | ACTGGG | 1 cut(s) | 651 |
| BmsI | GCATC | 4 cut(s) | 328, 472, 869, 1513 |
| BmuI | ACTGGG | 1 cut(s) | 651 |
| BpiI | GAAGAC | 2 cut(s) | 1320, 1561 |
| BpmI | CTGGAG | 1 cut(s) | 147 |
| Bpu14I | TTCGAA | 1 cut(s) | 507 |
| BpuEI | CTTGAG | 2 cut(s) | 1013, 1959 |
| BsaJI | CCNNGG | 6 cut(s) | 181, 593, 616, 1040, 1545, 1653 |
| Bse1I | ACTGG | 2 cut(s) | 657, 976 |
| Bse3DI | GCAATG | 2 cut(s) | 285, 297 |
| BseBI | CCWGG | 3 cut(s) | 813, 1042, 1547 |
| BseDI | CCNNGG | 6 cut(s) | 181, 593, 616, 1040, 1545, 1653 |
| BseGI | GGATG | 6 cut(s) | 584, 991, 1100, 1302, 1528, 1972 |
| BseMI | GCAATG | 2 cut(s) | 285, 297 |
| BseMII | CTCAG | 3 cut(s) | 77, 95, 780 |
| BseNI | ACTGG | 2 cut(s) | 657, 976 |
| BseYI | CCCAGC | 3 cut(s) | 1631, 1686, 1788 |
| BsgI | GTGCAG | 1 cut(s) | 1559 |
| Bsh1236I | CGCG | 2 cut(s) | 126, 183 |
| Bsh1285I | CGRYCG | 1 cut(s) | 130 |
| BshFI | GGCC | 4 cut(s) | 180, 429, 540, 913 |
| BshNI | GGYRCC | 1 cut(s) | 185 |
| BsiEI | CGRYCG | 1 cut(s) | 130 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1270 |
| BsiSI | CCGG | 3 cut(s) | 5, 120, 1355 |
| BslFI | GGGAC | 3 cut(s) | 341, 639, 680 |
| BsmAI | GTCTC | 3 cut(s) | 702, 1964, 1973 |
| BsmFI | GGGAC | 3 cut(s) | 341, 639, 680 |
| BsnI | GGCC | 4 cut(s) | 180, 429, 540, 913 |
| Bsp119I | TTCGAA | 1 cut(s) | 507 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1270, 1513 |
| Bsp1407I | TGTACA | 1 cut(s) | 561 |
| BspANI | GGCC | 4 cut(s) | 180, 429, 540, 913 |
| BspCNI | CTCAG | 3 cut(s) | 76, 94, 781 |
| BspFNI | CGCG | 2 cut(s) | 126, 183 |
| BspLI | GGNNCC | 2 cut(s) | 187, 655 |
| BspMAI | CTGCAG | 2 cut(s) | 241, 1498 |
| BspPI | GGATC | 3 cut(s) | 236, 889, 1595 |
| BspQI | GCTCTTC | 1 cut(s) | 1176 |
| BspT104I | TTCGAA | 1 cut(s) | 507 |
| BspT107I | GGYRCC | 1 cut(s) | 185 |
| BsrDI | GCAATG | 2 cut(s) | 285, 297 |
| BsrGI | TGTACA | 1 cut(s) | 561 |
| BsrI | ACTGG | 2 cut(s) | 657, 976 |
| BssECI | CCNNGG | 6 cut(s) | 181, 593, 616, 1040, 1545, 1653 |
| BssNAI | GTATAC | 1 cut(s) | 1868 |
| BssT1I | CCWWGG | 2 cut(s) | 616, 1653 |
| Bst1107I | GTATAC | 1 cut(s) | 1868 |
| Bst2UI | CCWGG | 3 cut(s) | 813, 1042, 1547 |
| Bst4CI | ACNGT | 2 cut(s) | 1365, 2071 |
| Bst6I | CTCTTC | 2 cut(s) | 1176, 1546 |
| BstAUI | TGTACA | 1 cut(s) | 561 |
| BstBI | TTCGAA | 1 cut(s) | 507 |
| BstC8I | GCNNGC | 3 cut(s) | 172, 343, 715 |
| BstDEI | CTNAG | 4 cut(s) | 63, 81, 789, 1244 |
| BstDSI | CCRYGG | 2 cut(s) | 181, 593 |
| BstEII | GGTNACC | 1 cut(s) | 1781 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1577 |
| BstF5I | GGATG | 6 cut(s) | 584, 991, 1100, 1302, 1528, 1972 |
| BstFNI | CGCG | 2 cut(s) | 126, 183 |
| BstHHI | GCGC | 3 cut(s) | 311, 958, 1440 |
| BstMAI | GTCTC | 3 cut(s) | 702, 1964, 1973 |
| BstMCI | CGRYCG | 1 cut(s) | 130 |
| BstNI | CCWGG | 3 cut(s) | 813, 1042, 1547 |
| BstNSI | RCATGY | 2 cut(s) | 896, 1448 |
| BstPI | GGTNACC | 1 cut(s) | 1781 |
| BstSCI | CCNGG | 3 cut(s) | 811, 1040, 1545 |
| BstSFI | CTRYAG | 4 cut(s) | 144, 237, 1485, 1494 |
| BstUI | CGCG | 2 cut(s) | 126, 183 |
| BstV2I | GAAGAC | 2 cut(s) | 1320, 1561 |
| BstX2I | RGATCY | 1 cut(s) | 241 |
| BstYI | RGATCY | 1 cut(s) | 241 |
| BstZ17I | GTATAC | 1 cut(s) | 1868 |
| BsuRI | GGCC | 4 cut(s) | 180, 429, 540, 913 |
| BtgI | CCRYGG | 2 cut(s) | 181, 593 |
| BtrI | CACGTC | 2 cut(s) | 1388, 1764 |
| BtsCI | GGATG | 6 cut(s) | 584, 991, 1100, 1302, 1528, 1972 |
| BtsIMutI | CAGTG | 1 cut(s) | 1370 |
| Cac8I | GCNNGC | 3 cut(s) | 172, 343, 715 |
| CaiI | CAGNNNCTG | 3 cut(s) | 170, 245, 479 |
| CfoI | GCGC | 3 cut(s) | 311, 958, 1440 |
| Cfr13I | GGNCC | 5 cut(s) | 155, 476, 539, 653, 2028 |
| Cfr42I | CCGCGG | 1 cut(s) | 184 |
| CseI | GACGC | 1 cut(s) | 132 |
| Csp6I | GTAC | 5 cut(s) | 23, 368, 562, 1674, 1989 |
| CviAII | CATG | 9 cut(s) | 773, 893, 953, 1233, 1445, 1519, 1591, 1757, 2012 |
| CviQI | GTAC | 5 cut(s) | 23, 368, 562, 1674, 1989 |
| DdeI | CTNAG | 4 cut(s) | 63, 81, 789, 1244 |
| DraI | TTTAAA | 1 cut(s) | 1141 |
| DriI | GACNNNNNGTC | 1 cut(s) | 975 |
| EaeI | YGGCCR | 1 cut(s) | 427 |
| Eam1104I | CTCTTC | 2 cut(s) | 1176, 1546 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 975 |
| EarI | CTCTTC | 2 cut(s) | 1176, 1546 |
| EciI | GGCGGA | 1 cut(s) | 360 |
| Ecl136II | GAGCTC | 1 cut(s) | 1268 |
| Eco130I | CCWWGG | 2 cut(s) | 616, 1653 |
| Eco147I | AGGCCT | 1 cut(s) | 913 |
| Eco24I | GRGCYC | 2 cut(s) | 1270, 1513 |
| Eco32I | GATATC | 2 cut(s) | 1206, 1409 |
| Eco47I | GGWCC | 4 cut(s) | 155, 476, 653, 2028 |
| Eco53kI | GAGCTC | 1 cut(s) | 1268 |
| Eco57I | CTGAAG | 2 cut(s) | 35, 1292 |
| Eco91I | GGTNACC | 1 cut(s) | 1781 |
| EcoICRI | GAGCTC | 1 cut(s) | 1268 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1577 |
| EcoO109I | RGGNCCY | 2 cut(s) | 155, 476 |
| EcoO65I | GGTNACC | 1 cut(s) | 1781 |
| EcoRI | GAATTC | 1 cut(s) | 676 |
| EcoRII | CCWGG | 3 cut(s) | 811, 1040, 1545 |
| EcoRV | GATATC | 2 cut(s) | 1206, 1409 |
| EcoT14I | CCWWGG | 2 cut(s) | 616, 1653 |
| EcoT38I | GRGCYC | 2 cut(s) | 1270, 1513 |
| ErhI | CCWWGG | 2 cut(s) | 616, 1653 |
| FaeI | CATG | 9 cut(s) | 776, 896, 956, 1236, 1448, 1522, 1594, 1760, 2015 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 407, 439, 740, 772 |
| FaqI | GGGAC | 3 cut(s) | 341, 639, 680 |
| FatI | CATG | 9 cut(s) | 772, 892, 952, 1232, 1444, 1518, 1590, 1756, 2011 |
| FbaI | TGATCA | 3 cut(s) | 904, 1825, 1921 |
| FblI | GTMKAC | 2 cut(s) | 249, 1867 |
| FokI | GGATG | 6 cut(s) | 591, 998, 1087, 1309, 1535, 1979 |
| FriOI | GRGCYC | 2 cut(s) | 1270, 1513 |
| FspAI | RTGCGCAY | 1 cut(s) | 957 |
| FspBI | CTAG | 1 cut(s) | 743 |
| FspI | TGCGCA | 1 cut(s) | 957 |
| GlaI | GCGC | 3 cut(s) | 310, 957, 1439 |
| GsaI | CCCAGC | 3 cut(s) | 1635, 1690, 1792 |
| GsuI | CTGGAG | 1 cut(s) | 147 |
| HaeIII | GGCC | 4 cut(s) | 180, 429, 540, 913 |
| HapII | CCGG | 3 cut(s) | 5, 120, 1355 |
| HgaI | GACGC | 1 cut(s) | 132 |
| HhaI | GCGC | 3 cut(s) | 311, 958, 1440 |
| Hin1II | CATG | 9 cut(s) | 776, 896, 956, 1236, 1448, 1522, 1594, 1760, 2015 |
| Hin6I | GCGC | 3 cut(s) | 309, 956, 1438 |
| HinP1I | GCGC | 3 cut(s) | 309, 956, 1438 |
| HincII | GTYRAC | 2 cut(s) | 809, 1450 |
| HindII | GTYRAC | 2 cut(s) | 809, 1450 |
| HindIII | AAGCTT | 2 cut(s) | 318, 749 |
| HinfI | GANTC | 5 cut(s) | 995, 1427, 1709, 1972, 1981 |
| HpaII | CCGG | 3 cut(s) | 5, 120, 1355 |
| HphI | GGTGA | 2 cut(s) | 649, 1070 |
| Hpy166II | GTNNAC | 6 cut(s) | 250, 562, 809, 1098, 1450, 1868 |
| Hpy188I | TCNGA | 9 cut(s) | 84, 702, 909, 969, 1272, 1343, 1825, 1896, 1921 |
| Hpy188III | TCNNGA | 6 cut(s) | 743, 864, 992, 1151, 1806, 1976 |
| Hpy8I | GTNNAC | 6 cut(s) | 250, 562, 809, 1098, 1450, 1868 |
| Hpy99I | CGWCG | 1 cut(s) | 1392 |
| HpyCH4III | ACNGT | 2 cut(s) | 1365, 2071 |
| HpyCH4IV | ACGT | 4 cut(s) | 669, 1387, 1763, 1954 |
| HpyF3I | CTNAG | 4 cut(s) | 63, 81, 789, 1244 |
| HpySE526I | ACGT | 4 cut(s) | 669, 1387, 1763, 1954 |
| Hsp92II | CATG | 9 cut(s) | 776, 896, 956, 1236, 1448, 1522, 1594, 1760, 2015 |
| HspAI | GCGC | 3 cut(s) | 309, 956, 1438 |
| Ksp22I | TGATCA | 3 cut(s) | 904, 1825, 1921 |
| KspI | CCGCGG | 1 cut(s) | 184 |
| LguI | GCTCTTC | 1 cut(s) | 1176 |
| LmnI | GCTCC | 3 cut(s) | 306, 1265, 1837 |
| LweI | GCATC | 4 cut(s) | 328, 472, 869, 1513 |
| MaeI | CTAG | 1 cut(s) | 743 |
| MaeII | ACGT | 4 cut(s) | 669, 1387, 1763, 1954 |
| MaeIII | GTNAC | 3 cut(s) | 1159, 1759, 1781 |
| MflI | RGATCY | 1 cut(s) | 241 |
| MhlI | GDGCHC | 2 cut(s) | 1270, 1513 |
| MlsI | TGGCCA | 1 cut(s) | 429 |
| MluNI | TGGCCA | 1 cut(s) | 429 |
| MlyI | GAGTC | 3 cut(s) | 1004, 1966, 1975 |
| MmeI | TCCRAC | 1 cut(s) | 947 |
| Mox20I | TGGCCA | 1 cut(s) | 429 |
| MroXI | GAANNNNTTC | 2 cut(s) | 750, 1713 |
| MscI | TGGCCA | 1 cut(s) | 429 |
| MseI | TTAA | 5 cut(s) | 758, 1013, 1140, 1940, 1961 |
| MslI | CAYNNNNRTG | 7 cut(s) | 290, 635, 722, 777, 865, 1416, 1766 |
| Msp20I | TGGCCA | 1 cut(s) | 429 |
| MspA1I | CMGCKG | 4 cut(s) | 170, 183, 1565, 1788 |
| MspI | CCGG | 3 cut(s) | 5, 120, 1355 |
| MspR9I | CCNGG | 3 cut(s) | 813, 1042, 1547 |
| MvaI | CCWGG | 3 cut(s) | 813, 1042, 1547 |
| MvnI | CGCG | 2 cut(s) | 126, 183 |
| NlaIII | CATG | 9 cut(s) | 776, 896, 956, 1236, 1448, 1522, 1594, 1760, 2015 |
| NlaIV | GGNNCC | 2 cut(s) | 187, 655 |
| NmuCI | GTSAC | 1 cut(s) | 1759 |
| NsbI | TGCGCA | 1 cut(s) | 957 |
| NspI | RCATGY | 2 cut(s) | 896, 1448 |
| NspV | TTCGAA | 1 cut(s) | 507 |
| PceI | AGGCCT | 1 cut(s) | 913 |
| PciI | ACATGT | 2 cut(s) | 892, 1444 |
| PciSI | GCTCTTC | 1 cut(s) | 1176 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1769 |
| PdmI | GAANNNNTTC | 2 cut(s) | 750, 1713 |
| PfeI | GAWTC | 2 cut(s) | 1427, 1709 |
| PflFI | GACNNNGTC | 1 cut(s) | 126 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 170, 663 |
| PleI | GAGTC | 3 cut(s) | 1003, 1966, 1975 |
| PpsI | GAGTC | 3 cut(s) | 1003, 1966, 1975 |
| PpuMI | RGGWCCY | 2 cut(s) | 155, 476 |
| PscI | ACATGT | 2 cut(s) | 892, 1444 |
| PshBI | ATTAAT | 1 cut(s) | 1013 |
| PsiI | TTATAA | 1 cut(s) | 1025 |
| Psp124BI | GAGCTC | 1 cut(s) | 1270 |
| Psp5II | RGGWCCY | 2 cut(s) | 155, 476 |
| Psp6I | CCWGG | 3 cut(s) | 811, 1040, 1545 |
| PspEI | GGTNACC | 1 cut(s) | 1781 |
| PspFI | CCCAGC | 3 cut(s) | 1631, 1686, 1788 |
| PspGI | CCWGG | 3 cut(s) | 811, 1040, 1545 |
| PspN4I | GGNNCC | 2 cut(s) | 187, 655 |
| PspPI | GGNCC | 5 cut(s) | 155, 476, 539, 653, 2028 |
| PspPPI | RGGWCCY | 2 cut(s) | 155, 476 |
| PstI | CTGCAG | 2 cut(s) | 241, 1498 |
| PstNI | CAGNNNCTG | 3 cut(s) | 170, 245, 479 |
| PsuI | RGATCY | 1 cut(s) | 241 |
| PsyI | GACNNNGTC | 1 cut(s) | 126 |
| PvuII | CAGCTG | 2 cut(s) | 170, 1565 |
| RsaI | GTAC | 5 cut(s) | 24, 369, 563, 1675, 1990 |
| RsaNI | GTAC | 5 cut(s) | 23, 368, 562, 1674, 1989 |
| RseI | CAYNNNNRTG | 7 cut(s) | 290, 635, 722, 777, 865, 1416, 1766 |
| SacI | GAGCTC | 1 cut(s) | 1270 |
| SacII | CCGCGG | 1 cut(s) | 184 |
| SapI | GCTCTTC | 1 cut(s) | 1176 |
| SaqAI | TTAA | 5 cut(s) | 758, 1013, 1140, 1940, 1961 |
| Sau96I | GGNCC | 5 cut(s) | 155, 476, 539, 653, 2028 |
| SchI | GAGTC | 3 cut(s) | 1004, 1966, 1975 |
| ScrFI | CCNGG | 3 cut(s) | 813, 1042, 1547 |
| SduI | GDGCHC | 2 cut(s) | 1270, 1513 |
| SfaNI | GCATC | 4 cut(s) | 328, 472, 869, 1513 |
| SfcI | CTRYAG | 4 cut(s) | 144, 237, 1485, 1494 |
| Sfr303I | CCGCGG | 1 cut(s) | 184 |
| SfuI | TTCGAA | 1 cut(s) | 507 |
| SgrBI | CCGCGG | 1 cut(s) | 184 |
| SinI | GGWCC | 4 cut(s) | 155, 476, 653, 2028 |
| SmiI | ATTTAAAT | 1 cut(s) | 1141 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 290, 635, 722, 777, 865, 1416, 1766 |
| SmlI | CTYRAG | 2 cut(s) | 992, 1974 |
| SmoI | CTYRAG | 2 cut(s) | 992, 1974 |
| SseBI | AGGCCT | 1 cut(s) | 913 |
| SspI | AATATT | 1 cut(s) | 1017 |
| SspMI | CTAG | 1 cut(s) | 743 |
| SstI | GAGCTC | 1 cut(s) | 1270 |
| StuI | AGGCCT | 1 cut(s) | 913 |
| StyD4I | CCNGG | 3 cut(s) | 811, 1040, 1545 |
| StyI | CCWWGG | 2 cut(s) | 616, 1653 |
| SwaI | ATTTAAAT | 1 cut(s) | 1141 |
| TaaI | ACNGT | 2 cut(s) | 1365, 2071 |
| TaiI | ACGT | 4 cut(s) | 672, 1390, 1766, 1957 |
| TaqI | TCGA | 6 cut(s) | 94, 130, 507, 863, 979, 1215 |
| TatI | WGTACW | 1 cut(s) | 561 |
| TauI | GCSGC | 6 cut(s) | 183, 191, 194, 197, 200, 713 |
| TfiI | GAWTC | 2 cut(s) | 1427, 1709 |
| Tru1I | TTAA | 5 cut(s) | 758, 1013, 1140, 1940, 1961 |
| Tru9I | TTAA | 5 cut(s) | 758, 1013, 1140, 1940, 1961 |
| TscAI | CASTG | 1 cut(s) | 1370 |
| TseFI | GTSAC | 1 cut(s) | 1759 |
| Tsp45I | GTSAC | 1 cut(s) | 1759 |
| TspDTI | ATGAA | 8 cut(s) | 590, 941, 1184, 1194, 1335, 1412, 1476, 1924 |
| TspGWI | ACGGA | 1 cut(s) | 582 |
| TspRI | CASTG | 1 cut(s) | 1370 |
| Tth111I | GACNNNGTC | 1 cut(s) | 126 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 170, 663 |
| VpaK11BI | GGWCC | 4 cut(s) | 155, 476, 653, 2028 |
| VspI | ATTAAT | 1 cut(s) | 1013 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1577 |
| XapI | RAATTY | 4 cut(s) | 676, 793, 1306, 1609 |
| XbaI | TCTAGA | 1 cut(s) | 742 |
| XceI | RCATGY | 2 cut(s) | 896, 1448 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 437 |
| XmiI | GTMKAC | 2 cut(s) | 249, 1867 |
| XmnI | GAANNNNTTC | 2 cut(s) | 750, 1713 |
| XspI | CTAG | 1 cut(s) | 743 |