AT3G08970

DNAJ heat shock N-terminal domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
2737297 .. 2740549
3253 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G08970.2

Sequence Viewer

Length: 1719 bp
ATGGTGAGAACAAGATTGGCGATATCTGTTGTTCTTGTGTCGACATTGTTGTTGTTGAATGTGAAAGCGAAGAGCGTTGATCCTTACAAGGTTCTTGGAGTATCTAAGGATGCAAAGCAGCGTGAAATCCAGAAAGCTTTCCACAAGCAATCTCTGAAATATCATCCAGATAAAAACAAAGATAAGGGTGCTCAGGAGAAGTTTGCTGAGATTAATAATGCGTATGAGATCTTATCTGATGAAGAGAAGAGGAAAAACTATGATCTTTATGGAGATGAGAAAGGACAGCCTGGATTTGATTCGGGGTTTCCCGGAGGTAATGGTGGGTATTCTTACTCCTCAAGTGGTGGTGGTTTCAACTTTGGAGGGCCTGGTGGTTGGCAAAATATGGGCGGTGGGGGAGGTTCCAAATCGTTTTCTTTCTCGTTTGGCGGTCCTAGTGAAAGCTCCTTTGGTTTTGGTATGGATGATATCTTTTCCATGTTTTCGGGCGGTAGTTCTAAAGGAAAGGAGCAGTTTGGTGGCTTTGGTAGCTCATCGAATGCTGAATCTAAATCAAAGAGCAGTACTGTAGCAGCTATCAAAACCATTAACTCTCAGGTCTATAAGAAGGACGTTGTGGACCAAGGGATGACTTGGCTTTTGTTGTCGTATCTTCCATCTCAGAGGGGAAGCCAGTACCATGAATCCATCATAGAGGAAGTTGCTGAGTCGTTGCAAGGAGCTTTAAAGGTTGGGCGATTAAATTGTGAAACAGAATCCTCTCTTTGCAAACAACTAGGCATAGTTCCTCGTAGGGCTCCAAGGATGTTTGTTTATTCATACACATCAAGTGGCAAAGCTACCTTAGCAGAATATACTGAAGAGCTTGTTGCAAAGAAGGTGAAAAGCTTCTGCCAGGAACATCTACCGAGATTCTCAAAAAAGATTGATCTGAATACATTCGATGTATCTGCCGTTAGCTCACAAAAGACTCCTAAAGTTTTGCTTCTGTCAACAAAGAAAGACACTCCTGTCATCTGGCGGGTTCTAAGTGGCTTGTACAATGGACGATTTGTCTTTTACAACACAGAGGTCCATGATACTTCTGATCCAAAGATACAAAAGTTGGGGGTAGACAAGTTTCCGGCAATAGTTGGTTGGTTATCGAATGGGGAGAAGCAAGTCTTGAAAACAGGTATCACTGTGAAAAATCTGAAATCAGCTGTCCAGGAACTTGGTAAATTGCTTGAAGGATTAGAGAAGAAGAACAAGAAGGTCTCTTCTAAGAGTCAGGCGGGCCAAGCCCCTAACGAGTCCTCAGAAAAGATACCTCTTCTGTCAAGACCAAATTTTGACTCCATTTGTGGGGAGAACACTCCTGTTTGTATCATTGGTGCCTTCAGATCGTCAAATGGTAAAGAGAAGCTGCAGTCAATAATGTCCAAGGTATCCCAGAAATCACTCTCTCGACGACAAGCTTCAACCACAGGTTCTCAGGACACAGTATCCTATTCGCTTCTAGACGCAACAAAACAATCTGCGTTCTTGAGCTCCCTTGACAAATCAGAGTTCAAAACTTCTTCTGATAAGCTCCTAATAGCTTACAAGCCTCGACGAGGTAAGTTTGCTACATTCAAAGGCGATATGACTATTGAGGAAGTTGAGAAATTCGTAGCAGCTGTTCTTAACGGAGACATACAGTTCACAAAGACAAGACAGAAACCCCAGATCAAATGA

Protein Analysis

572

Amino Acids

62.57

Weight (kDa)

9.52

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 27 - 88 4.5e-26 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1013
AccB1I GGYRCC 1 cut(s) 1376
AccI GTMKAC 2 cut(s) 41, 1116
AciI CCGC 5 cut(s) 393, 432, 492, 1024, 1277
AclWI GGATC 2 cut(s) 74, 1085
AcsI RAATTY 2 cut(s) 1330, 1649
AcuI CTGAAG 2 cut(s) 882, 1366
AfaI GTAC 3 cut(s) 568, 680, 1043
AfiI CCNNNNNNNGG 2 cut(s) 1347, 1598
AgsI TTSAA 7 cut(s) 58, 358, 1171, 1232, 1464, 1555, 1618
AhdI GACNNNNNGTC 1 cut(s) 1055
AjnI CCWGG 4 cut(s) 289, 370, 897, 1209
AjuI GAANNNNNNNTTGG 2 cut(s) 435, 467
Alw21I GWGCWC 2 cut(s) 193, 1535
Alw26I GTCTC 2 cut(s) 1264, 1668
AlwI GGATC 2 cut(s) 74, 1085
AoxI GGCC 2 cut(s) 368, 1279
ApeKI GCWGC 4 cut(s) 118, 575, 1408, 1658
ApoI RAATTY 2 cut(s) 1330, 1649
ArsI GACNNNNNNTTYG 2 cut(s) 625, 657
AseI ATTAAT 1 cut(s) 213
Asp700I GAANNNNTTC 3 cut(s) 137, 890, 941
AspS9I GGNCC 5 cut(s) 368, 434, 622, 1075, 1279
AsuC2I CCSGG 1 cut(s) 312
AsuHPI GGTGA 2 cut(s) 16, 895
AvaII GGWCC 3 cut(s) 434, 622, 1075
BaeI ACNNNNGTAYC 2 cut(s) 1091, 1124
BanI GGYRCC 1 cut(s) 1376
BanII GRGCYC 2 cut(s) 802, 1535
Bbv12I GWGCWC 2 cut(s) 193, 1535
BbvI GCAGC 4 cut(s) 130, 587, 1395, 1670
BccI CCATC 2 cut(s) 667, 698
BceAI ACGGC 1 cut(s) 941
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 4 cut(s) 291, 372, 899, 1211
BciVI GTATCC 2 cut(s) 1441, 1498
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 2 cut(s) 1264, 1668
BfaI CTAG 3 cut(s) 438, 779, 1502
BfmI CTRYAG 2 cut(s) 570, 1409
BfuI GTATCC 2 cut(s) 1441, 1498
BglII AGATCT 1 cut(s) 228
BisI GCNGC 4 cut(s) 119, 576, 1409, 1659
BlsI GCNGC 4 cut(s) 120, 577, 1410, 1660
BmcAI AGTACT 1 cut(s) 568
Bme1390I CCNGG 5 cut(s) 291, 312, 372, 899, 1211
Bme18I GGWCC 3 cut(s) 434, 622, 1075
BmeRI GACNNNNNGTC 1 cut(s) 1055
BmgT120I GGNCC 5 cut(s) 368, 434, 622, 1075, 1279
BmiI GGNNCC 3 cut(s) 406, 801, 1378
BmrFI CCNGG 5 cut(s) 291, 312, 372, 899, 1211
BmsI GCATC 1 cut(s) 100
Bpu10I CCTNAGC 2 cut(s) 192, 847
BpuEI CTTGAG 2 cut(s) 325, 1549
BpuMI CCSGG 1 cut(s) 312
BsaI GGTCTC 1 cut(s) 1264
BsaJI CCNNGG 3 cut(s) 625, 803, 1425
Bsc4I CCNNNNNNNGG 2 cut(s) 1347, 1598
Bse1I ACTGG 1 cut(s) 676
BseBI CCWGG 4 cut(s) 291, 372, 899, 1211
BseDI CCNNGG 3 cut(s) 625, 803, 1425
BseGI GGATG 5 cut(s) 115, 163, 472, 636, 813
BseLI CCNNNNNNNGG 2 cut(s) 1347, 1598
BseMII CTCAG 7 cut(s) 198, 206, 611, 677, 699, 1314, 1490
BseNI ACTGG 1 cut(s) 676
BseRI GAGGAG 1 cut(s) 328
BseXI GCAGC 4 cut(s) 130, 587, 1395, 1670
BshFI GGCC 2 cut(s) 370, 1281
BshNI GGYRCC 1 cut(s) 1376
BsiHKAI GWGCWC 2 cut(s) 193, 1535
BsiSI CCGG 2 cut(s) 312, 1127
BslI CCNNNNNNNGG 2 cut(s) 1347, 1598
BsmAI GTCTC 2 cut(s) 1264, 1668
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 2 cut(s) 370, 1281
Bso31I GGTCTC 1 cut(s) 1264
Bsp1286I GDGCHC 3 cut(s) 193, 802, 1535
Bsp1407I TGTACA 1 cut(s) 1041
Bsp143I GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
BspACI CCGC 5 cut(s) 393, 432, 492, 1024, 1277
BspANI GGCC 2 cut(s) 370, 1281
BspCNI CTCAG 7 cut(s) 199, 205, 610, 676, 700, 1313, 1489
BspLI GGNNCC 3 cut(s) 406, 801, 1378
BspMAI CTGCAG 1 cut(s) 1413
BspPI GGATC 2 cut(s) 74, 1085
BspQI GCTCTTC 2 cut(s) 65, 858
BspT107I GGYRCC 1 cut(s) 1376
BspTNI GGTCTC 1 cut(s) 1264
BsrGI TGTACA 1 cut(s) 1041
BsrI ACTGG 1 cut(s) 676
BssECI CCNNGG 3 cut(s) 625, 803, 1425
BssMI GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
BssT1I CCWWGG 3 cut(s) 625, 803, 1425
Bst2UI CCWGG 4 cut(s) 291, 372, 899, 1211
Bst4CI ACNGT 4 cut(s) 571, 1186, 1486, 1683
Bst6I CTCTTC 6 cut(s) 65, 237, 242, 858, 1267, 1320
BstAUI TGTACA 1 cut(s) 1041
BstC8I GCNNGC 1 cut(s) 1279
BstENI CCTNNNNNAGG 1 cut(s) 1596
BstF5I GGATG 5 cut(s) 115, 163, 472, 636, 813
BstKTI GATC 7 cut(s) 82, 231, 265, 934, 1093, 1388, 1713
BstMAI GTCTC 2 cut(s) 1264, 1668
BstMBI GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
BstMWI GCNNNNNNNGC 3 cut(s) 531, 848, 1283
BstNI CCWGG 4 cut(s) 291, 372, 899, 1211
BstSCI CCNGG 5 cut(s) 289, 310, 370, 897, 1209
BstSFI CTRYAG 2 cut(s) 570, 1409
BstV1I GCAGC 4 cut(s) 130, 587, 1395, 1670
BstX2I RGATCY 1 cut(s) 228
BstXI CCANNNNNNTGG 1 cut(s) 1217
BstYI RGATCY 1 cut(s) 228
BsuI GTATCC 2 cut(s) 1441, 1498
BsuRI GGCC 2 cut(s) 370, 1281
BtsCI GGATG 5 cut(s) 115, 163, 472, 636, 813
BtsIMutI CAGTG 1 cut(s) 1182
Cac8I GCNNGC 1 cut(s) 1279
Cfr13I GGNCC 5 cut(s) 368, 434, 622, 1075, 1279
CseI GACGC 1 cut(s) 1514
Csp6I GTAC 3 cut(s) 567, 679, 1042
CviAII CATG 3 cut(s) 481, 683, 1079
CviQI GTAC 3 cut(s) 567, 679, 1042
DpnI GATC 7 cut(s) 81, 230, 264, 933, 1092, 1387, 1712
DpnII GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
DraI TTTAAA 1 cut(s) 729
DrdI GACNNNNNNGTC 1 cut(s) 1013
DriI GACNNNNNGTC 1 cut(s) 1055
DseDI GACNNNNNNGTC 1 cut(s) 1013
Eam1104I CTCTTC 6 cut(s) 65, 237, 242, 858, 1267, 1320
Eam1105I GACNNNNNGTC 1 cut(s) 1055
EarI CTCTTC 6 cut(s) 65, 237, 242, 858, 1267, 1320
Ecl136II GAGCTC 1 cut(s) 1533
Eco130I CCWWGG 3 cut(s) 625, 803, 1425
Eco24I GRGCYC 2 cut(s) 802, 1535
Eco31I GGTCTC 1 cut(s) 1264
Eco32I GATATC 2 cut(s) 24, 472
Eco47I GGWCC 3 cut(s) 434, 622, 1075
Eco53kI GAGCTC 1 cut(s) 1533
Eco57I CTGAAG 2 cut(s) 882, 1366
EcoICRI GAGCTC 1 cut(s) 1533
EcoNI CCTNNNNNAGG 1 cut(s) 1596
EcoO109I RGGNCCY 1 cut(s) 368
EcoRII CCWGG 4 cut(s) 289, 370, 897, 1209
EcoRV GATATC 2 cut(s) 24, 472
EcoT14I CCWWGG 3 cut(s) 625, 803, 1425
EcoT38I GRGCYC 2 cut(s) 802, 1535
ErhI CCWWGG 3 cut(s) 625, 803, 1425
FaeI CATG 3 cut(s) 484, 686, 1082
FalI AAGNNNNNCTT 4 cut(s) 972, 1004, 1151, 1183
FatI CATG 3 cut(s) 480, 682, 1078
FauI CCCGC 2 cut(s) 1017, 1270
FblI GTMKAC 2 cut(s) 41, 1116
Fnu4HI GCNGC 4 cut(s) 119, 576, 1409, 1659
FokI GGATG 5 cut(s) 122, 150, 479, 643, 820
FriOI GRGCYC 2 cut(s) 802, 1535
Fsp4HI GCNGC 4 cut(s) 119, 576, 1409, 1659
FspBI CTAG 3 cut(s) 438, 779, 1502
GluI GCNGC 4 cut(s) 119, 576, 1409, 1659
HaeIII GGCC 2 cut(s) 370, 1281
HapII CCGG 2 cut(s) 312, 1127
HgaI GACGC 1 cut(s) 1514
Hin1II CATG 3 cut(s) 484, 686, 1082
HincII GTYRAC 2 cut(s) 42, 996
HindII GTYRAC 2 cut(s) 42, 996
HindIII AAGCTT 3 cut(s) 135, 889, 1458
HpaII CCGG 2 cut(s) 312, 1127
HphI GGTGA 2 cut(s) 16, 895
Hpy166II GTNNAC 5 cut(s) 42, 622, 996, 1117, 1686
Hpy188III TCNNGA 9 cut(s) 130, 167, 194, 1168, 1323, 1449, 1478, 1502, 1528
Hpy8I GTNNAC 5 cut(s) 42, 622, 996, 1117, 1686
Hpy99I CGWCG 2 cut(s) 1455, 1599
HpyAV CCTTC 5 cut(s) 604, 874, 1226, 1249, 1390
HpyCH4III ACNGT 4 cut(s) 571, 1186, 1486, 1683
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 5 cut(s) 113, 718, 771, 875, 1411
HpyF10VI GCNNNNNNNGC 3 cut(s) 531, 848, 1283
HpySE526I ACGT 1 cut(s) 615
Hsp92II CATG 3 cut(s) 484, 686, 1082
Kzo9I GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
LguI GCTCTTC 2 cut(s) 65, 858
LmnI GCTCC 6 cut(s) 452, 511, 722, 805, 1538, 1578
Lsp1109I GCAGC 4 cut(s) 130, 587, 1395, 1670
LweI GCATC 1 cut(s) 100
MaeI CTAG 3 cut(s) 438, 779, 1502
MaeII ACGT 1 cut(s) 615
MalI GATC 7 cut(s) 81, 230, 264, 933, 1092, 1387, 1712
MboI GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
MflI RGATCY 1 cut(s) 228
MhlI GDGCHC 3 cut(s) 193, 802, 1535
MluCI AATT 4 cut(s) 745, 1223, 1330, 1649
MlyI GAGTC 5 cut(s) 719, 967, 1279, 1304, 1331
MroXI GAANNNNTTC 3 cut(s) 137, 890, 941
MseI TTAA 5 cut(s) 213, 591, 728, 743, 1668
MspA1I CMGCKG 2 cut(s) 1205, 1661
MspI CCGG 2 cut(s) 312, 1127
MspR9I CCNGG 5 cut(s) 291, 312, 372, 899, 1211
Mva1269I GAATGC 1 cut(s) 547
MvaI CCWGG 4 cut(s) 291, 372, 899, 1211
MwoI GCNNNNNNNGC 3 cut(s) 531, 848, 1283
NciI CCSGG 1 cut(s) 312
NdeII GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
NlaIII CATG 3 cut(s) 484, 686, 1082
NlaIV GGNNCC 3 cut(s) 406, 801, 1378
PciSI GCTCTTC 2 cut(s) 65, 858
PctI GAATGC 1 cut(s) 547
PdmI GAANNNNTTC 3 cut(s) 137, 890, 941
PfeI GAWTC 5 cut(s) 299, 548, 686, 758, 915
PfoI TCCNGGA 2 cut(s) 310, 1209
PkrI GCNGC 4 cut(s) 120, 577, 1410, 1660
PleI GAGTC 5 cut(s) 718, 967, 1278, 1303, 1331
PpsI GAGTC 5 cut(s) 718, 967, 1278, 1303, 1331
PshBI ATTAAT 1 cut(s) 213
Psp124BI GAGCTC 1 cut(s) 1535
Psp6I CCWGG 4 cut(s) 289, 370, 897, 1209
PspGI CCWGG 4 cut(s) 289, 370, 897, 1209
PspN4I GGNNCC 3 cut(s) 406, 801, 1378
PspPI GGNCC 5 cut(s) 368, 434, 622, 1075, 1279
PsrI GAACNNNNNNTAC 2 cut(s) 1647, 1679
PstI CTGCAG 1 cut(s) 1413
PsuI RGATCY 1 cut(s) 228
PvuII CAGCTG 2 cut(s) 1205, 1661
RsaI GTAC 3 cut(s) 568, 680, 1043
RsaNI GTAC 3 cut(s) 567, 679, 1042
SacI GAGCTC 1 cut(s) 1535
SalI GTCGAC 1 cut(s) 40
SapI GCTCTTC 2 cut(s) 65, 858
SaqAI TTAA 5 cut(s) 213, 591, 728, 743, 1668
SatI GCNGC 4 cut(s) 119, 576, 1409, 1659
Sau3AI GATC 7 cut(s) 79, 228, 262, 931, 1090, 1385, 1710
Sau96I GGNCC 5 cut(s) 368, 434, 622, 1075, 1279
ScaI AGTACT 1 cut(s) 568
SchI GAGTC 5 cut(s) 719, 967, 1279, 1304, 1331
ScrFI CCNGG 5 cut(s) 291, 312, 372, 899, 1211
SduI GDGCHC 3 cut(s) 193, 802, 1535
SfaNI GCATC 1 cut(s) 100
SfcI CTRYAG 2 cut(s) 570, 1409
SinI GGWCC 3 cut(s) 434, 622, 1075
SmlI CTYRAG 2 cut(s) 340, 1528
SmoI CTYRAG 2 cut(s) 340, 1528
Sse9I AATT 4 cut(s) 745, 1223, 1330, 1649
SsiI CCGC 5 cut(s) 393, 432, 492, 1024, 1277
SspMI CTAG 3 cut(s) 438, 779, 1502
SstI GAGCTC 1 cut(s) 1535
StyD4I CCNGG 5 cut(s) 289, 310, 370, 897, 1209
StyI CCWWGG 3 cut(s) 625, 803, 1425
TaaI ACNGT 4 cut(s) 571, 1186, 1486, 1683
TaiI ACGT 1 cut(s) 618
TaqI TCGA 6 cut(s) 41, 539, 945, 1148, 1450, 1594
TasI AATT 4 cut(s) 745, 1223, 1330, 1649
TatI WGTACW 2 cut(s) 566, 1041
TfiI GAWTC 5 cut(s) 299, 548, 686, 758, 915
Tru1I TTAA 5 cut(s) 213, 591, 728, 743, 1668
Tru9I TTAA 5 cut(s) 213, 591, 728, 743, 1668
TscAI CASTG 1 cut(s) 1189
TseI GCWGC 4 cut(s) 118, 575, 1408, 1658
TspDTI ATGAA 3 cut(s) 255, 699, 810
TspGWI ACGGA 1 cut(s) 1686
TspRI CASTG 1 cut(s) 1189
VpaK11BI GGWCC 3 cut(s) 434, 622, 1075
VspI ATTAAT 1 cut(s) 213
XagI CCTNNNNNAGG 1 cut(s) 1596
XapI RAATTY 2 cut(s) 1330, 1649
XbaI TCTAGA 1 cut(s) 1501
XmiI GTMKAC 2 cut(s) 41, 1116
XmnI GAANNNNTTC 3 cut(s) 137, 890, 941
XspI CTAG 3 cut(s) 438, 779, 1502
ZrmI AGTACT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.