Prupe.6G280600_v2.0.a1

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
26223386 .. 26228161
4776 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G280600.2

Sequence Viewer

Length: 1725 bp
ATGGGGAACCGGTTAGTGTTGTGGATCTTCTTGTCGGCGTTGCTCTTCTTCTTAACCATGGAAGCAACAACCATAGACCCTTACAAGGTCCTTGGAGTCGAGCGGAATGCAAGCCAACGTGAAATTCAGAAAGCTTTCCACAAGCTTTCTCTTCAATATCACCCGGACAAGAATAAGAACAAGGGAGCTCAAGCAAAGTTTTCTGAGATAAACAATGCGTATGAGATTTTATCAGATGAAGAGAAGAGGAAAAATTATGACACGTATGGAGATGAGAAGGGCAGTCCTGGATTTGGAGCTGGTTCTCCTGGAGATCATGGTGGATATACTTACTTCACAAATGGTGGACCAGGAAAAAACCAGTTTACCTACGGACCAAGTGACTGGCAGAGCATGGGCGGGCAGGGAGGTTCCAAGTCATTCTCCTTTTCTTTTGGAGGTCCCAGTGGTCCAAGTTCATTTGGTTTTGGTATGGACGACATTTTCTCAAACCTTTTTGGGGGTAAACCTGGAGGTGGGGGTCAGTTTGGTGGTTTCAGTGGTTCAACTGGGTCTCGACCAGGGTCTCAACCTGGGTCTAGGGGTTCCCCAGTGAGCATTAGTGCCATCAGTTCACAGGTGTATAAGAAAGAAATAGTTGACCAAGGGATGACTTGGCTCTTGTTATCTTACACACCGTCATTGAAGGGGCATCAACATGTTGAATCTGTCATAAAGGAAGTTGCCAGTTCACTGCAGGGAGCTTTAAAGATTGGAAGCATAAACTGTGAGACAGAACCATCTCTCTGTAAGGACCTCGGCATATATCCCCGCAGAATGCCCAGGGTATTTGTTTATTCTTACAAAGTGAGTGAAAGGGGTTCTTTGGTTGAGTATGATGGTGATTGGGCTGCAAAACCTTTAAAAATGTTTTGCCAAGATCATCTTCCAAGGTTTTCAAAACGGGTTGACGTGAAACATTTTGAGTCTTCCACTGTCACAGTCCATAAATTGCCTAGTGTCGTGCTTCTTTCCACCAAGAAAGATACACCTGTAATCTGGCGTGTCCTCAGTGGATTGCATCACAATCACTTCCTTTTCTATAATGCAGAGGTCAATGATGTTTCTGATCCAACAGTGAAGAAGCTAGGAGTTGATGCACTTCCAGCTATAATTGGTTGGCTTTCAAACGGGGAGAAGCATGTCCTAAAAGCAGGCATTACCATCAAAGATATGAAGTCGGCAATTAATGAGCTTAGTGCTTTACTTGAAGGTTTTGAGAAAAAGAACAAGAAGGCATCTTCAAGTCAGGCCAAAAAGTCGCCAACTGGGGAGAAGCAAATACCCCTACTGACAGAGTCTAATTTTGATGCTCTTTGTGGTGAGAAAACTCCAGTTTGCATCATTGGTGCATTCAGGTCTTCCAAAGAAAGAAAGAAGTTGGAATCAATTTTGAACACGCTCTCTCAGAAATCACTATCAAGGCAACAGAATTCAGCCGATGGAAGGGATTCCATTTCCTACACTCTCTTGGATGCCTCCAAGAAGGCATCATTCTTAAATGCATTTGACAAAGCAGGATTTAAATCGTTAGATAAGGTCTTGGTTGCCTACAAACCTCGGAGGGGGACGTTCGCAGTGTTTGAGGGTGAAATGACCACAGAAGAAGTAGAGAGGTTCATTGGCTCAGTTCTTAATGGGGACATACGTTTTACCAAGACTCGGCAGAAACCCGTTCTGAAATGA

Protein Analysis

575

Amino Acids

62.92

Weight (kDa)

9.37

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 103
AciI CCGC 3 cut(s) 103, 399, 811
AclWI GGATC 2 cut(s) 32, 1103
AcsI RAATTY 2 cut(s) 123, 1471
AfiI CCNNNNNNNGG 7 cut(s) 85, 293, 499, 515, 1485, 1604, 1701
AflIII ACRYGT 2 cut(s) 261, 697
AgeI ACCGGT 1 cut(s) 9
AgsI TTSAA 9 cut(s) 155, 546, 685, 704, 939, 1167, 1250, 1284, 1435
AjiI CACGTC 1 cut(s) 952
AjnI CCWGG 7 cut(s) 286, 307, 349, 508, 559, 571, 821
AjuI GAANNNNNNNTTGG 4 cut(s) 108, 140, 909, 941
AluBI AGCT 8 cut(s) 134, 145, 188, 299, 743, 1126, 1148, 1234
AluI AGCT 8 cut(s) 134, 145, 188, 299, 743, 1126, 1148, 1234
Alw21I GWGCWC 1 cut(s) 190
Alw26I GTCTC 3 cut(s) 558, 570, 764
AlwI GGATC 2 cut(s) 32, 1103
AoxI GGCC 1 cut(s) 1290
ApeKI GCWGC 1 cut(s) 890
ApoI RAATTY 2 cut(s) 123, 1471
AseI ATTAAT 1 cut(s) 1227
AsiGI ACCGGT 1 cut(s) 9
Asp700I GAANNNNTTC 2 cut(s) 134, 1489
AspS9I GGNCC 6 cut(s) 88, 347, 374, 440, 449, 793
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 4 cut(s) 152, 893, 1373, 1640
AvaII GGWCC 6 cut(s) 88, 347, 374, 440, 449, 793
BaeI ACNNNNGTAYC 2 cut(s) 1017, 1050
BanII GRGCYC 1 cut(s) 190
BbsI GAAGAC 2 cut(s) 960, 1392
Bbv12I GWGCWC 1 cut(s) 190
BbvI GCAGC 1 cut(s) 877
BccI CCATC 5 cut(s) 614, 787, 872, 1211, 1475
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 7 cut(s) 288, 309, 351, 510, 561, 573, 823
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 3 cut(s) 558, 570, 764
BfaI CTAG 3 cut(s) 579, 996, 1127
BfmI CTRYAG 1 cut(s) 734
BisI GCNGC 1 cut(s) 891
BlsI GCNGC 1 cut(s) 892
Bme1390I CCNGG 8 cut(s) 164, 288, 309, 351, 510, 561, 573, 823
Bme18I GGWCC 6 cut(s) 88, 347, 374, 440, 449, 793
BmgBI CACGTC 1 cut(s) 952
BmgT120I GGNCC 6 cut(s) 88, 347, 374, 440, 449, 793
BmiI GGNNCC 4 cut(s) 8, 412, 442, 586
BmrFI CCNGG 8 cut(s) 164, 288, 309, 351, 510, 561, 573, 823
BmrI ACTGGG 4 cut(s) 438, 558, 584, 1317
BmsI GCATC 8 cut(s) 700, 1069, 1126, 1286, 1339, 1389, 1504, 1538
BmuI ACTGGG 4 cut(s) 438, 558, 584, 1317
BoxI GACNNNNGTC 1 cut(s) 562
BpiI GAAGAC 2 cut(s) 960, 1392
BpmI CTGGAG 3 cut(s) 330, 531, 1356
BpuEI CTTGAG 1 cut(s) 174
BpuMI CCSGG 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 264
BsaBI GATNNNNATC 1 cut(s) 1564
BsaI GGTCTC 2 cut(s) 558, 570
BsaWI WCCGGW 1 cut(s) 9
Bsc4I CCNNNNNNNGG 7 cut(s) 85, 293, 499, 515, 1485, 1604, 1701
Bse118I RCCGGY 1 cut(s) 9
Bse1I ACTGG 8 cut(s) 361, 389, 444, 553, 590, 726, 1312, 1373
Bse8I GATNNNNATC 1 cut(s) 1564
BseBI CCWGG 7 cut(s) 288, 309, 351, 510, 561, 573, 823
BseGI GGATG 2 cut(s) 654, 1519
BseJI GATNNNNATC 1 cut(s) 1564
BseLI CCNNNNNNNGG 7 cut(s) 85, 293, 499, 515, 1485, 1604, 1701
BseMII CTCAG 4 cut(s) 195, 1063, 1460, 1680
BseNI ACTGG 8 cut(s) 361, 389, 444, 553, 590, 726, 1312, 1373
BseXI GCAGC 1 cut(s) 877
BshFI GGCC 1 cut(s) 1292
BshTI ACCGGT 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 190
BsiSI CCGG 2 cut(s) 10, 164
BslFI GGGAC 3 cut(s) 426, 1621, 1694
BslI CCNNNNNNNGG 7 cut(s) 85, 293, 499, 515, 1485, 1604, 1701
BsmAI GTCTC 3 cut(s) 558, 570, 764
BsmFI GGGAC 3 cut(s) 426, 1621, 1694
BsmI GAATGC 3 cut(s) 112, 822, 1391
BsnI GGCC 1 cut(s) 1292
Bso31I GGTCTC 2 cut(s) 558, 570
Bsp1286I GDGCHC 1 cut(s) 190
Bsp143I GATC 4 cut(s) 24, 313, 919, 1108
Bsp19I CCATGG 1 cut(s) 57
BspACI CCGC 3 cut(s) 103, 399, 811
BspANI GGCC 1 cut(s) 1292
BspCNI CTCAG 4 cut(s) 196, 1062, 1459, 1679
BspLI GGNNCC 4 cut(s) 8, 412, 442, 586
BspMAI CTGCAG 1 cut(s) 738
BspPI GGATC 2 cut(s) 32, 1103
BspQI GCTCTTC 1 cut(s) 50
BspTNI GGTCTC 2 cut(s) 558, 570
BsrBI CCGCTC 1 cut(s) 103
BsrFI RCCGGY 1 cut(s) 9
BsrI ACTGG 8 cut(s) 361, 389, 444, 553, 590, 726, 1312, 1373
BssAI RCCGGY 1 cut(s) 9
BssMI GATC 4 cut(s) 24, 313, 919, 1108
BssT1I CCWWGG 4 cut(s) 57, 91, 643, 929
Bst2UI CCWGG 7 cut(s) 288, 309, 351, 510, 561, 573, 823
Bst4CI ACNGT 5 cut(s) 678, 767, 976, 982, 1117
Bst6I CTCTTC 4 cut(s) 50, 156, 234, 239
BstBAI YACGTR 1 cut(s) 264
BstC8I GCNNGC 3 cut(s) 112, 401, 1195
BstDEI CTNAG 5 cut(s) 204, 1049, 1235, 1446, 1666
BstDSI CCRYGG 1 cut(s) 57
BstF5I GGATG 2 cut(s) 654, 1519
BstKTI GATC 4 cut(s) 27, 316, 922, 1111
BstMAI GTCTC 3 cut(s) 558, 570, 764
BstMBI GATC 4 cut(s) 24, 313, 919, 1108
BstMWI GCNNNNNNNGC 1 cut(s) 1145
BstNI CCWGG 7 cut(s) 288, 309, 351, 510, 561, 573, 823
BstNSI RCATGY 2 cut(s) 701, 1184
BstPAI GACNNNNGTC 1 cut(s) 562
BstSCI CCNGG 8 cut(s) 162, 286, 307, 349, 508, 559, 571, 821
BstSFI CTRYAG 1 cut(s) 734
BstV1I GCAGC 1 cut(s) 877
BstV2I GAAGAC 2 cut(s) 960, 1392
BstX2I RGATCY 1 cut(s) 24
BstXI CCANNNNNNTGG 1 cut(s) 384
BstYI RGATCY 1 cut(s) 24
BsuRI GGCC 1 cut(s) 1292
BtgI CCRYGG 1 cut(s) 57
BtrI CACGTC 1 cut(s) 952
BtsCI GGATG 2 cut(s) 654, 1519
BtsI GCAGTG 2 cut(s) 731, 1623
BtsIMutI CAGTG 8 cut(s) 451, 544, 597, 731, 972, 1057, 1122, 1623
Cac8I GCNNGC 3 cut(s) 112, 401, 1195
Cfr10I RCCGGY 1 cut(s) 9
Cfr13I GGNCC 6 cut(s) 88, 347, 374, 440, 449, 793
CspAI ACCGGT 1 cut(s) 9
CviAII CATG 5 cut(s) 58, 317, 394, 698, 1181
DdeI CTNAG 5 cut(s) 204, 1049, 1235, 1446, 1666
DpnI GATC 4 cut(s) 26, 315, 921, 1110
DpnII GATC 4 cut(s) 24, 313, 919, 1108
DraI TTTAAA 3 cut(s) 747, 903, 1564
Eam1104I CTCTTC 4 cut(s) 50, 156, 234, 239
EarI CTCTTC 4 cut(s) 50, 156, 234, 239
Ecl136II GAGCTC 1 cut(s) 188
Eco130I CCWWGG 4 cut(s) 57, 91, 643, 929
Eco24I GRGCYC 1 cut(s) 190
Eco31I GGTCTC 2 cut(s) 558, 570
Eco47I GGWCC 6 cut(s) 88, 347, 374, 440, 449, 793
Eco53kI GAGCTC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 188
EcoO109I RGGNCCY 3 cut(s) 88, 440, 793
EcoRI GAATTC 1 cut(s) 1471
EcoRII CCWGG 7 cut(s) 286, 307, 349, 508, 559, 571, 821
EcoT14I CCWWGG 4 cut(s) 57, 91, 643, 929
EcoT22I ATGCAT 1 cut(s) 1546
EcoT38I GRGCYC 1 cut(s) 190
ErhI CCWWGG 4 cut(s) 57, 91, 643, 929
FaeI CATG 5 cut(s) 61, 320, 397, 701, 1184
FalI AAGNNNNNCTT 4 cut(s) 847, 879, 909, 941
FaqI GGGAC 3 cut(s) 426, 1621, 1694
FatI CATG 5 cut(s) 57, 316, 393, 697, 1180
FauI CCCGC 2 cut(s) 392, 818
Fnu4HI GCNGC 1 cut(s) 891
FokI GGATG 2 cut(s) 661, 1526
FriOI GRGCYC 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 891
FspBI CTAG 3 cut(s) 579, 996, 1127
GluI GCNGC 1 cut(s) 891
GsuI CTGGAG 3 cut(s) 330, 531, 1356
HaeIII GGCC 1 cut(s) 1292
HapII CCGG 2 cut(s) 10, 164
Hin1II CATG 5 cut(s) 61, 320, 397, 701, 1184
HincII GTYRAC 2 cut(s) 640, 949
HindII GTYRAC 2 cut(s) 640, 949
HindIII AAGCTT 2 cut(s) 132, 143
HinfI GANTC 7 cut(s) 96, 704, 965, 1337, 1424, 1490, 1699
HpaII CCGG 2 cut(s) 10, 164
HphI GGTGA 4 cut(s) 152, 893, 1373, 1640
Hpy166II GTNNAC 7 cut(s) 347, 366, 506, 614, 640, 731, 949
Hpy188I TCNGA 7 cut(s) 129, 205, 235, 1108, 1449, 1602, 1719
Hpy188III TCNNGA 1 cut(s) 555
Hpy8I GTNNAC 7 cut(s) 347, 366, 506, 614, 640, 731, 949
HpyAV CCTTC 6 cut(s) 271, 679, 1244, 1267, 1479, 1519
HpyCH4III ACNGT 5 cut(s) 678, 767, 976, 982, 1117
HpyCH4IV ACGT 5 cut(s) 118, 263, 951, 1610, 1687
HpyCH4V TGCA 9 cut(s) 110, 736, 893, 1060, 1088, 1139, 1380, 1391, 1544
HpyF10VI GCNNNNNNNGC 1 cut(s) 1145
HpyF3I CTNAG 5 cut(s) 204, 1049, 1235, 1446, 1666
HpySE526I ACGT 5 cut(s) 118, 263, 951, 1610, 1687
Hsp92II CATG 5 cut(s) 61, 320, 397, 701, 1184
Kzo9I GATC 4 cut(s) 24, 313, 919, 1108
LguI GCTCTTC 1 cut(s) 50
LmnI GCTCC 3 cut(s) 185, 296, 740
Lsp1109I GCAGC 1 cut(s) 877
LweI GCATC 8 cut(s) 700, 1069, 1126, 1286, 1339, 1389, 1504, 1538
MaeI CTAG 3 cut(s) 579, 996, 1127
MaeII ACGT 5 cut(s) 118, 263, 951, 1610, 1687
MaeIII GTNAC 2 cut(s) 380, 976
MalI GATC 4 cut(s) 26, 315, 921, 1110
MbiI CCGCTC 1 cut(s) 103
MboI GATC 4 cut(s) 24, 313, 919, 1108
MflI RGATCY 1 cut(s) 24
MhlI GDGCHC 1 cut(s) 190
MluCI AATT 8 cut(s) 123, 253, 989, 1152, 1224, 1342, 1428, 1471
MlyI GAGTC 4 cut(s) 105, 974, 1346, 1693
MmeI TCCRAC 2 cut(s) 1136, 1401
Mph1103I ATGCAT 1 cut(s) 1546
MroXI GAANNNNTTC 2 cut(s) 134, 1489
MseI TTAA 7 cut(s) 53, 746, 902, 1227, 1538, 1563, 1674
MslI CAYNNNNRTG 1 cut(s) 696
MspI CCGG 2 cut(s) 10, 164
MspR9I CCNGG 8 cut(s) 164, 288, 309, 351, 510, 561, 573, 823
Mva1269I GAATGC 3 cut(s) 112, 822, 1391
MvaI CCWGG 7 cut(s) 288, 309, 351, 510, 561, 573, 823
MwoI GCNNNNNNNGC 1 cut(s) 1145
NciI CCSGG 1 cut(s) 164
NcoI CCATGG 1 cut(s) 57
NdeII GATC 4 cut(s) 24, 313, 919, 1108
NlaIII CATG 5 cut(s) 61, 320, 397, 701, 1184
NlaIV GGNNCC 4 cut(s) 8, 412, 442, 586
NmeAIII GCCGAG 2 cut(s) 777, 1681
NmuCI GTSAC 2 cut(s) 380, 976
NsiI ATGCAT 1 cut(s) 1546
NspI RCATGY 2 cut(s) 701, 1184
PasI CCCWGGG 1 cut(s) 822
PciI ACATGT 1 cut(s) 697
PciSI GCTCTTC 1 cut(s) 50
PctI GAATGC 3 cut(s) 112, 822, 1391
PdmI GAANNNNTTC 2 cut(s) 134, 1489
PfeI GAWTC 3 cut(s) 704, 1424, 1490
PflFI GACNNNGTC 1 cut(s) 1336
PfoI TCCNGGA 2 cut(s) 286, 307
PinAI ACCGGT 1 cut(s) 9
PkrI GCNGC 1 cut(s) 892
PleI GAGTC 4 cut(s) 104, 973, 1345, 1693
PpsI GAGTC 4 cut(s) 104, 973, 1345, 1693
Ppu21I YACGTR 1 cut(s) 264
PpuMI RGGWCCY 3 cut(s) 88, 440, 793
PscI ACATGT 1 cut(s) 697
PshAI GACNNNNGTC 1 cut(s) 562
PshBI ATTAAT 1 cut(s) 1227
Psp124BI GAGCTC 1 cut(s) 190
Psp5II RGGWCCY 3 cut(s) 88, 440, 793
Psp6I CCWGG 7 cut(s) 286, 307, 349, 508, 559, 571, 821
PspGI CCWGG 7 cut(s) 286, 307, 349, 508, 559, 571, 821
PspN4I GGNNCC 4 cut(s) 8, 412, 442, 586
PspPI GGNCC 6 cut(s) 88, 347, 374, 440, 449, 793
PspPPI RGGWCCY 3 cut(s) 88, 440, 793
PstI CTGCAG 1 cut(s) 738
PsuI RGATCY 1 cut(s) 24
PsyI GACNNNGTC 1 cut(s) 1336
RseI CAYNNNNRTG 1 cut(s) 696
SacI GAGCTC 1 cut(s) 190
SapI GCTCTTC 1 cut(s) 50
SaqAI TTAA 7 cut(s) 53, 746, 902, 1227, 1538, 1563, 1674
SatI GCNGC 1 cut(s) 891
Sau3AI GATC 4 cut(s) 24, 313, 919, 1108
Sau96I GGNCC 6 cut(s) 88, 347, 374, 440, 449, 793
SchI GAGTC 4 cut(s) 105, 974, 1346, 1693
ScrFI CCNGG 8 cut(s) 164, 288, 309, 351, 510, 561, 573, 823
SduI GDGCHC 1 cut(s) 190
SfaNI GCATC 8 cut(s) 700, 1069, 1126, 1286, 1339, 1389, 1504, 1538
SfcI CTRYAG 1 cut(s) 734
SinI GGWCC 6 cut(s) 88, 347, 374, 440, 449, 793
SmiI ATTTAAAT 1 cut(s) 1564
SmiMI CAYNNNNRTG 1 cut(s) 696
SmlI CTYRAG 1 cut(s) 189
SmoI CTYRAG 1 cut(s) 189
Sse9I AATT 8 cut(s) 123, 253, 989, 1152, 1224, 1342, 1428, 1471
SsiI CCGC 3 cut(s) 103, 399, 811
SspMI CTAG 3 cut(s) 579, 996, 1127
SstI GAGCTC 1 cut(s) 190
StyD4I CCNGG 8 cut(s) 162, 286, 307, 349, 508, 559, 571, 821
StyI CCWWGG 4 cut(s) 57, 91, 643, 929
SwaI ATTTAAAT 1 cut(s) 1564
TaaI ACNGT 5 cut(s) 678, 767, 976, 982, 1117
TaiI ACGT 5 cut(s) 121, 266, 954, 1613, 1690
TaqI TCGA 2 cut(s) 99, 556
TasI AATT 8 cut(s) 123, 253, 989, 1152, 1224, 1342, 1428, 1471
TfiI GAWTC 3 cut(s) 704, 1424, 1490
Tru1I TTAA 7 cut(s) 53, 746, 902, 1227, 1538, 1563, 1674
Tru9I TTAA 7 cut(s) 53, 746, 902, 1227, 1538, 1563, 1674
TscAI CASTG 8 cut(s) 451, 544, 597, 738, 979, 1057, 1122, 1623
TseFI GTSAC 2 cut(s) 380, 976
TseI GCWGC 1 cut(s) 890
Tsp45I GTSAC 2 cut(s) 380, 976
TspDTI ATGAA 4 cut(s) 252, 447, 1229, 1648
TspGWI ACGGA 1 cut(s) 387
TspRI CASTG 8 cut(s) 451, 544, 597, 738, 979, 1057, 1122, 1623
Tth111I GACNNNGTC 1 cut(s) 1336
VpaK11BI GGWCC 6 cut(s) 88, 347, 374, 440, 449, 793
VspI ATTAAT 1 cut(s) 1227
XapI RAATTY 2 cut(s) 123, 1471
XceI RCATGY 2 cut(s) 701, 1184
XmnI GAANNNNTTC 2 cut(s) 134, 1489
XspI CTAG 3 cut(s) 579, 996, 1127
Zsp2I ATGCAT 1 cut(s) 1546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.