pycom04g14320

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
17171374 .. 17174431
3058 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g14320.4

Sequence Viewer

Length: 1227 bp
ATGGAGAACCGGTTTACAGTTTGGATCTTGGTGTCATTGCTACTCTTCTTCCTCTTAGCCATGGAAGCGAAAACGGTAGACCCTTACAAGGTACTTGGAGTGGAGCGGAATGCAGGTCAGCGTGAAATTCAGAAAGCGTTCCATAAGCTCTCTCTTCAATATCACCCAGACAAGAATAAAAGCAAGGGAGCTCAAGCAAAGTTTGCTGAGATAAACAACGCGTATGAAATTTTATCTGATGAAGAGAAAAGGAAAAATTATGATACCTATGGAGATGAGAAGGGAAATCCTGGATTTGGAGGTGGTTCTCCTGGAGATCATGGTGGATATACCTACTTTACAAATGGTGGACCAGGACAGAACCACTTTACCTACGGACCTGGTGACTGGCAGAGCATGGGTGGGCAGGGAGGTTCCAAGTCATTCTCCTTTTCCTTTGGAGGTCCCAGTGGTCCAAGTTCATTTGGTTTTGGCATGGAAGACATCTTTTCAAACTTTTTTGGGGGTAAACCTGGAGGTGGGGGTCAGTTTGGTGGTTTCAGTGGTTCAACTGGGTCTCGACCCGGGTCTAAGACTTCTCCAGTGACCATTACGACCGTCAGTTCACAGGTGTATAAGAAAGAAATAGTTGACCGAGGGATGACTTGGCTACTGTTATCTTACACTCCTTCATTGAAGGGGAAGCAACACGTTGAAAATATCATGGAGGAAGTTGCTAGTTCCCTGCAGGGAGCCTTAAAGGTTGGAAGCATAAACTGTGAGACAGAACCCTCTCTCTGTAAGGACCTTGGCATATATCCCAGCAGAATGCCCAGGGTATTTGTGTACAAAGTGAGTGGAAAGGGTTCTTTGGTTGAGTATGATGGGGATTGGGCTGCAAAACCTTTGAAGACATTTTGCCAAGACAATCTGCCAAGGTTTTCGAAACGGGTTGATTTGAACCGTGTTGAGTCTTCCACTTTCACAACCAATAAATTACGTAGTGTGGTGCTTCTTTCCACCAAGAAAGATACACCTGTTATCTGGCGTGTCCTTAGCGGATTGCATCACAATCACTTCATTTTCTATGATGCAGAGGTCCATGATGCTTCTGATCGATCAAGGTGTGAAGAAGCTGGGAGTTGGTGCACTTCCAGCTATAGTTGGTTGGCTTCCGAACGGGGAGAAGCATGTCTTAAAAGCAGGCATTACCCCCAAAGATATGAAGTTGGCGATTACAGAGCTTAG

Protein Analysis

409

Amino Acids

45.05

Weight (kDa)

8.67

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 104
AccBSI CCGCTC 1 cut(s) 106
AccI GTMKAC 1 cut(s) 78
AccII CGCG 1 cut(s) 221
AciI CCGC 2 cut(s) 106, 1038
AclWI GGATC 1 cut(s) 32
AcsI RAATTY 2 cut(s) 126, 228
AfaI GTAC 2 cut(s) 93, 827
AfiI CCNNNNNNNGG 3 cut(s) 88, 296, 518
AflIII ACRYGT 2 cut(s) 219, 688
AgeI ACCGGT 1 cut(s) 9
AgsI TTSAA 7 cut(s) 158, 492, 549, 676, 695, 889, 940
AjnI CCWGG 6 cut(s) 289, 310, 352, 379, 511, 812
AluBI AGCT 5 cut(s) 148, 191, 1115, 1137, 1223
AluI AGCT 5 cut(s) 148, 191, 1115, 1137, 1223
Alw21I GWGCWC 2 cut(s) 193, 1130
Alw26I GTCTC 2 cut(s) 561, 755
Alw44I GTGCAC 1 cut(s) 1126
AlwI GGATC 1 cut(s) 32
Ama87I CYCGRG 1 cut(s) 563
ApaLI GTGCAC 1 cut(s) 1126
ApeKI GCWGC 1 cut(s) 875
ApoI RAATTY 2 cut(s) 126, 228
AsiGI ACCGGT 1 cut(s) 9
Asp700I GAANNNNTTC 2 cut(s) 137, 844
AspS9I GGNCC 6 cut(s) 350, 377, 443, 452, 784, 1078
AsuC2I CCSGG 2 cut(s) 564, 565
AsuHPI GGTGA 2 cut(s) 155, 395
AsuII TTCGAA 1 cut(s) 923
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 6 cut(s) 350, 377, 443, 452, 784, 1078
BaeGI GKGCMC 1 cut(s) 1130
BaeI ACNNNNGTAYC 2 cut(s) 1002, 1035
BanII GRGCYC 1 cut(s) 193
BbsI GAAGAC 3 cut(s) 486, 896, 945
Bbv12I GWGCWC 2 cut(s) 193, 1130
BbvI GCAGC 1 cut(s) 862
BccI CCATC 1 cut(s) 857
BciT130I CCWGG 6 cut(s) 291, 312, 354, 381, 513, 814
BcnI CCSGG 2 cut(s) 564, 565
BcoDI GTCTC 2 cut(s) 561, 755
BfaI CTAG 1 cut(s) 717
BfmI CTRYAG 2 cut(s) 725, 1138
BfuAI ACCTGC 1 cut(s) 104
BisI GCNGC 1 cut(s) 876
BlsI GCNGC 1 cut(s) 877
Bme1390I CCNGG 8 cut(s) 291, 312, 354, 381, 513, 564, 565, 814
Bme18I GGWCC 6 cut(s) 350, 377, 443, 452, 784, 1078
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 6 cut(s) 350, 377, 443, 452, 784, 1078
BmiI GGNNCC 3 cut(s) 415, 445, 733
BmrFI CCNGG 8 cut(s) 291, 312, 354, 381, 513, 564, 565, 814
BmrI ACTGGG 2 cut(s) 441, 561
BmsI GCATC 3 cut(s) 1054, 1060, 1075
BmuI ACTGGG 2 cut(s) 441, 561
BoxI GACNNNNGTC 1 cut(s) 565
BpiI GAAGAC 3 cut(s) 486, 896, 945
BpmI CTGGAG 3 cut(s) 333, 534, 564
Bpu10I CCTNAGC 1 cut(s) 1034
Bpu14I TTCGAA 1 cut(s) 923
BpuEI CTTGAG 1 cut(s) 177
BpuMI CCSGG 2 cut(s) 564, 565
Bsa29I ATCGAT 1 cut(s) 1096
BsaAI YACGTR 1 cut(s) 980
BsaI GGTCTC 1 cut(s) 561
BsaJI CCNNGG 7 cut(s) 60, 563, 634, 787, 812, 813, 914
BsaWI WCCGGW 1 cut(s) 9
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 296, 518
Bse118I RCCGGY 1 cut(s) 9
Bse1I ACTGG 4 cut(s) 392, 447, 556, 581
Bse3DI GCAATG 1 cut(s) 35
BseBI CCWGG 6 cut(s) 291, 312, 354, 381, 513, 814
BseCI ATCGAT 1 cut(s) 1096
BseDI CCNNGG 7 cut(s) 60, 563, 634, 787, 812, 813, 914
BseGI GGATG 1 cut(s) 645
BseLI CCNNNNNNNGG 3 cut(s) 88, 296, 518
BseMI GCAATG 1 cut(s) 35
BseMII CTCAG 1 cut(s) 198
BseNI ACTGG 4 cut(s) 392, 447, 556, 581
BseSI GKGCMC 1 cut(s) 1130
BseXI GCAGC 1 cut(s) 862
BseYI CCCAGC 2 cut(s) 800, 1115
Bsh1236I CGCG 1 cut(s) 221
Bsh1285I CGRYCG 1 cut(s) 597
BshTI ACCGGT 1 cut(s) 9
BshVI ATCGAT 1 cut(s) 1096
BsiEI CGRYCG 1 cut(s) 597
BsiHKAI GWGCWC 2 cut(s) 193, 1130
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 2 cut(s) 10, 564
BslFI GGGAC 1 cut(s) 429
BslI CCNNNNNNNGG 3 cut(s) 88, 296, 518
BsmAI GTCTC 2 cut(s) 561, 755
BsmFI GGGAC 1 cut(s) 429
BsmI GAATGC 2 cut(s) 115, 813
Bso31I GGTCTC 1 cut(s) 561
BsoBI CYCGRG 1 cut(s) 563
Bsp119I TTCGAA 1 cut(s) 923
Bsp1286I GDGCHC 2 cut(s) 193, 1130
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 4 cut(s) 24, 316, 1093, 1097
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 2 cut(s) 106, 1038
BspCNI CTCAG 1 cut(s) 199
BspDI ATCGAT 1 cut(s) 1096
BspFNI CGCG 1 cut(s) 221
BspLI GGNNCC 3 cut(s) 415, 445, 733
BspMAI CTGCAG 1 cut(s) 729
BspMI ACCTGC 1 cut(s) 104
BspPI GGATC 1 cut(s) 32
BspT104I TTCGAA 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 561
BsrBI CCGCTC 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 35
BsrFI RCCGGY 1 cut(s) 9
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 4 cut(s) 392, 447, 556, 581
BssAI RCCGGY 1 cut(s) 9
BssECI CCNNGG 7 cut(s) 60, 563, 634, 787, 812, 813, 914
BssMI GATC 4 cut(s) 24, 316, 1093, 1097
BssT1I CCWWGG 3 cut(s) 60, 787, 914
Bst2UI CCWGG 6 cut(s) 291, 312, 354, 381, 513, 814
Bst4CI ACNGT 6 cut(s) 19, 76, 598, 654, 758, 944
Bst6I CTCTTC 3 cut(s) 50, 159, 237
BstAPI GCANNNNNTGC 1 cut(s) 203
BstAUI TGTACA 1 cut(s) 825
BstBAI YACGTR 1 cut(s) 980
BstBI TTCGAA 1 cut(s) 923
BstC8I GCNNGC 1 cut(s) 1184
BstDEI CTNAG 5 cut(s) 55, 207, 570, 1034, 1224
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 1 cut(s) 645
BstFNI CGCG 1 cut(s) 221
BstKTI GATC 4 cut(s) 27, 319, 1096, 1100
BstMAI GTCTC 2 cut(s) 561, 755
BstMBI GATC 4 cut(s) 24, 316, 1093, 1097
BstMCI CGRYCG 1 cut(s) 597
BstMWI GCNNNNNNNGC 3 cut(s) 65, 203, 1134
BstNI CCWGG 6 cut(s) 291, 312, 354, 381, 513, 814
BstNSI RCATGY 1 cut(s) 1173
BstPAI GACNNNNGTC 1 cut(s) 565
BstSCI CCNGG 8 cut(s) 289, 310, 352, 379, 511, 562, 563, 812
BstSFI CTRYAG 2 cut(s) 725, 1138
BstSLI GKGCMC 1 cut(s) 1130
BstSNI TACGTA 1 cut(s) 980
BstUI CGCG 1 cut(s) 221
BstV1I GCAGC 1 cut(s) 862
BstV2I GAAGAC 3 cut(s) 486, 896, 945
BstX2I RGATCY 1 cut(s) 24
BstYI RGATCY 1 cut(s) 24
Bsu15I ATCGAT 1 cut(s) 1096
BsuTUI ATCGAT 1 cut(s) 1096
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 1 cut(s) 645
BtsIMutI CAGTG 3 cut(s) 454, 547, 588
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 1 cut(s) 1184
Cfr10I RCCGGY 1 cut(s) 9
Cfr13I GGNCC 6 cut(s) 350, 377, 443, 452, 784, 1078
Cfr9I CCCGGG 1 cut(s) 563
ClaI ATCGAT 1 cut(s) 1096
CsiI ACCWGGT 1 cut(s) 379
Csp6I GTAC 2 cut(s) 92, 826
CspAI ACCGGT 1 cut(s) 9
CspCI CAANNNNNGTGG 2 cut(s) 817, 852
CviAII CATG 7 cut(s) 61, 320, 397, 475, 703, 1082, 1170
CviQI GTAC 2 cut(s) 92, 826
DdeI CTNAG 5 cut(s) 55, 207, 570, 1034, 1224
DpnI GATC 4 cut(s) 26, 318, 1095, 1099
DpnII GATC 4 cut(s) 24, 316, 1093, 1097
Eam1104I CTCTTC 3 cut(s) 50, 159, 237
EarI CTCTTC 3 cut(s) 50, 159, 237
Ecl136II GAGCTC 1 cut(s) 191
Eco105I TACGTA 1 cut(s) 980
Eco130I CCWWGG 3 cut(s) 60, 787, 914
Eco24I GRGCYC 1 cut(s) 193
Eco31I GGTCTC 1 cut(s) 561
Eco47I GGWCC 6 cut(s) 350, 377, 443, 452, 784, 1078
Eco53kI GAGCTC 1 cut(s) 191
Eco88I CYCGRG 1 cut(s) 563
EcoICRI GAGCTC 1 cut(s) 191
EcoO109I RGGNCCY 2 cut(s) 443, 784
EcoRII CCWGG 6 cut(s) 289, 310, 352, 379, 511, 812
EcoT14I CCWWGG 3 cut(s) 60, 787, 914
EcoT38I GRGCYC 1 cut(s) 193
ErhI CCWWGG 3 cut(s) 60, 787, 914
FaeI CATG 7 cut(s) 64, 323, 400, 478, 706, 1085, 1173
FalI AAGNNNNNCTT 2 cut(s) 1158, 1190
FaqI GGGAC 1 cut(s) 429
FatI CATG 7 cut(s) 60, 319, 396, 474, 702, 1081, 1169
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 1 cut(s) 876
FokI GGATG 1 cut(s) 652
FriOI GRGCYC 1 cut(s) 193
Fsp4HI GCNGC 1 cut(s) 876
FspBI CTAG 1 cut(s) 717
GluI GCNGC 1 cut(s) 876
GsaI CCCAGC 2 cut(s) 804, 1119
GsuI CTGGAG 3 cut(s) 333, 534, 564
HapII CCGG 2 cut(s) 10, 564
Hin1II CATG 7 cut(s) 64, 323, 400, 478, 706, 1085, 1173
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HinfI GANTC 1 cut(s) 950
HpaII CCGG 2 cut(s) 10, 564
HphI GGTGA 2 cut(s) 155, 395
Hpy166II GTNNAC 8 cut(s) 15, 79, 350, 509, 605, 631, 826, 1128
Hpy188I TCNGA 4 cut(s) 132, 238, 1093, 1156
Hpy188III TCNNGA 1 cut(s) 558
Hpy8I GTNNAC 8 cut(s) 15, 79, 350, 509, 605, 631, 826, 1128
HpyAV CCTTC 3 cut(s) 274, 670, 678
HpyCH4III ACNGT 6 cut(s) 19, 76, 598, 654, 758, 944
HpyCH4IV ACGT 2 cut(s) 690, 979
HpyCH4V TGCA 6 cut(s) 113, 727, 878, 1045, 1073, 1128
HpyF10VI GCNNNNNNNGC 3 cut(s) 65, 203, 1134
HpyF3I CTNAG 5 cut(s) 55, 207, 570, 1034, 1224
HpySE526I ACGT 2 cut(s) 690, 979
Hsp92II CATG 7 cut(s) 64, 323, 400, 478, 706, 1085, 1173
Kzo9I GATC 4 cut(s) 24, 316, 1093, 1097
LmnI GCTCC 3 cut(s) 103, 188, 731
Lsp1109I GCAGC 1 cut(s) 862
LweI GCATC 3 cut(s) 1054, 1060, 1075
MabI ACCWGGT 1 cut(s) 379
MaeI CTAG 1 cut(s) 717
MaeII ACGT 2 cut(s) 690, 979
MaeIII GTNAC 2 cut(s) 383, 583
MalI GATC 4 cut(s) 26, 318, 1095, 1099
MbiI CCGCTC 1 cut(s) 106
MboI GATC 4 cut(s) 24, 316, 1093, 1097
MboII GAAGA 8 cut(s) 37, 40, 146, 254, 491, 901, 945, 1121
MflI RGATCY 1 cut(s) 24
MhlI GDGCHC 2 cut(s) 193, 1130
MluCI AATT 4 cut(s) 126, 228, 256, 974
MluI ACGCGT 1 cut(s) 219
MlyI GAGTC 1 cut(s) 959
MmeI TCCRAC 1 cut(s) 724
MnlI CCTC 9 cut(s) 62, 293, 404, 434, 509, 629, 700, 781, 1069
MroXI GAANNNNTTC 2 cut(s) 137, 844
MseI TTAA 2 cut(s) 737, 1176
MspI CCGG 2 cut(s) 10, 564
MspR9I CCNGG 8 cut(s) 291, 312, 354, 381, 513, 564, 565, 814
Mva1269I GAATGC 2 cut(s) 115, 813
MvaI CCWGG 6 cut(s) 291, 312, 354, 381, 513, 814
MvnI CGCG 1 cut(s) 221
MwoI GCNNNNNNNGC 3 cut(s) 65, 203, 1134
NciI CCSGG 2 cut(s) 564, 565
NcoI CCATGG 1 cut(s) 60
NdeII GATC 4 cut(s) 24, 316, 1093, 1097
NlaIII CATG 7 cut(s) 64, 323, 400, 478, 706, 1085, 1173
NlaIV GGNNCC 3 cut(s) 415, 445, 733
NmuCI GTSAC 2 cut(s) 383, 583
NspI RCATGY 1 cut(s) 1173
NspV TTCGAA 1 cut(s) 923
PasI CCCWGGG 1 cut(s) 813
PctI GAATGC 2 cut(s) 115, 813
PdmI GAANNNNTTC 2 cut(s) 137, 844
PfoI TCCNGGA 2 cut(s) 289, 310
PinAI ACCGGT 1 cut(s) 9
PkrI GCNGC 1 cut(s) 877
PleI GAGTC 1 cut(s) 958
PpsI GAGTC 1 cut(s) 958
Ppu21I YACGTR 1 cut(s) 980
PpuMI RGGWCCY 2 cut(s) 443, 784
PshAI GACNNNNGTC 1 cut(s) 565
Psp124BI GAGCTC 1 cut(s) 193
Psp5II RGGWCCY 2 cut(s) 443, 784
Psp6I CCWGG 6 cut(s) 289, 310, 352, 379, 511, 812
PspFI CCCAGC 2 cut(s) 800, 1115
PspGI CCWGG 6 cut(s) 289, 310, 352, 379, 511, 812
PspN4I GGNNCC 3 cut(s) 415, 445, 733
PspPI GGNCC 6 cut(s) 350, 377, 443, 452, 784, 1078
PspPPI RGGWCCY 2 cut(s) 443, 784
PstI CTGCAG 1 cut(s) 729
PsuI RGATCY 1 cut(s) 24
RsaI GTAC 2 cut(s) 93, 827
RsaNI GTAC 2 cut(s) 92, 826
SacI GAGCTC 1 cut(s) 193
SaqAI TTAA 2 cut(s) 737, 1176
SatI GCNGC 1 cut(s) 876
Sau3AI GATC 4 cut(s) 24, 316, 1093, 1097
Sau96I GGNCC 6 cut(s) 350, 377, 443, 452, 784, 1078
SbfI CCTGCAGG 1 cut(s) 729
SchI GAGTC 1 cut(s) 959
ScrFI CCNGG 8 cut(s) 291, 312, 354, 381, 513, 564, 565, 814
SdaI CCTGCAGG 1 cut(s) 729
SduI GDGCHC 2 cut(s) 193, 1130
SexAI ACCWGGT 1 cut(s) 379
SfaNI GCATC 3 cut(s) 1054, 1060, 1075
SfcI CTRYAG 2 cut(s) 725, 1138
SfuI TTCGAA 1 cut(s) 923
SinI GGWCC 6 cut(s) 350, 377, 443, 452, 784, 1078
SmaI CCCGGG 1 cut(s) 565
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
SnaBI TACGTA 1 cut(s) 980
Sse8387I CCTGCAGG 1 cut(s) 729
Sse9I AATT 4 cut(s) 126, 228, 256, 974
SsiI CCGC 2 cut(s) 106, 1038
SspMI CTAG 1 cut(s) 717
SstI GAGCTC 1 cut(s) 193
StyD4I CCNGG 8 cut(s) 289, 310, 352, 379, 511, 562, 563, 812
StyI CCWWGG 3 cut(s) 60, 787, 914
TaaI ACNGT 6 cut(s) 19, 76, 598, 654, 758, 944
TaiI ACGT 2 cut(s) 693, 982
TaqI TCGA 3 cut(s) 559, 923, 1096
TaqII GACCGA 1 cut(s) 648
TasI AATT 4 cut(s) 126, 228, 256, 974
TatI WGTACW 1 cut(s) 825
Tru1I TTAA 2 cut(s) 737, 1176
Tru9I TTAA 2 cut(s) 737, 1176
TscAI CASTG 3 cut(s) 454, 547, 588
TseFI GTSAC 2 cut(s) 383, 583
TseI GCWGC 1 cut(s) 875
Tsp45I GTSAC 2 cut(s) 383, 583
TspDTI ATGAA 6 cut(s) 240, 255, 450, 660, 1048, 1218
TspGWI ACGGA 1 cut(s) 390
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 3 cut(s) 454, 547, 588
VneI GTGCAC 1 cut(s) 1126
VpaK11BI GGWCC 6 cut(s) 350, 377, 443, 452, 784, 1078
XapI RAATTY 2 cut(s) 126, 228
XceI RCATGY 1 cut(s) 1173
XmaI CCCGGG 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 2 cut(s) 137, 844
XspI CTAG 1 cut(s) 717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.