Rh3AG115400

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
9900320 .. 9904437
4118 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG115400.1

Sequence Viewer

Length: 1461 bp
ATGTATGGAGATGAAAAGGGAAATCCTGGATTTCAATCTGGTTCACCAGGGGATCATGGTGGATATACTTACTTCACCAATGGTGGACCAGGACAAAACCAGTTTACCTACGGACCAAGTGATTGGCAGAGCATGGGTGGGCAGGGAGGTTCCCAATCGTTTTCCTTTTCCTTTGGTGGCCCCAGTGGTGGCCCAAGTCCATTCAGTTTTGGTATGAACGACATTTTCTCAAACTTTTTTGGGGATAATTCTGGAGCTGGAGGTCAGTTTGGTGGTTTCACTGGTTCAAGCAGGGCTCGACCTGACTCTCAGAGTACTCCGAAGAGCATTAGGGCCCTCAGTTCACAGGTCTATAAGAAAGAAGTAGTTGACCAGGGAATGACTTGGCTCTTGTTCTCTTATACGACCTCTTTGAAGGGGCATCAGCATGTTGAATCTCTGGTAGAGGAAGTTGCCAGCTCACTGAAGGGTGCCCTAAAGGTTGGAAGTGTAAACTGTGACACTGAGGCATCACTCTGCAAGGACCTTGGCATATATCCACGCAGAATGCCCAGGGTATTTGTTTATTCATACAAAGCGAGTGAGAAGGGTTTGTTGGTTGAGTATGATGGCGATTGGGGTGCCAAACCTTTAAAATCCTTTTGCCAAGACCATTTGCCAAGGTTTTCAAAGAGGGTCGACTTGAACTTCGTAAAGTCTTCCTCTGTCACAGTTGATAAATTTCCTACGGTGGTCCTTCTCTCCACCAAAAAAGATACTCCTGTTATCTGGCGCGTCCTCAGTGGACTGTATCACAAACGCATCATTTTCTATGATGTACAGGTCCAGGATGCTTCTGATCCAACAGTGAAGAAACTAGGGGTCGATGCACTACCAGCTATAGTTGGTTGGCTATCAAATGGGGAGAAGCATGTCTTAAAAACAGGCATTGCTGTTAAAGATTTGAAATCAGCAATTCATGATCTCAGTGGTTTAATTGAAGGTTTTGAGAAGAAGAACAAGAAGGCAGCTTCAGAGCAGTCCAAGAAAGCATCAACTGATTCAGGGGAGAATCAGATACCTCTACTGACCAAATCTAATTTTGATTCTCTCTGTGGCGACCAAATTCCAGTTTGCATCATTGGTGCATTTAGATCTTCCAAAGAAAGAAAGAAGTTGGAATCAGTTCTGAATACGGTCTCTCAGAAATCATTATCAAGGCGACAGAACTCGGCGCATGGCAGGGATTCCATCTCCTACACTCTCTTGGATGCCACCAAGCAGGCATCATTCTTAAACGCATTCGACAAAGCAGGATTTAAATCTTTAGATAAGGTCTTGGTGGCCTACAAACCTCGGAAGGGGACTTTTGCAGCATTTGAGGGTGAAATAACTGCAGAAGAAGTAGAGAAGTTTATTAGTGCAGTTCTTAACGGGGACATCCGATTCACCAGAACACAACAGAGCCCCCTTCTTAAATGA

Protein Analysis

486

Amino Acids

52.9

Weight (kDa)

9.21

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 470, 620
AccI GTMKAC 1 cut(s) 678
AccII CGCG 1 cut(s) 774
AclWI GGATC 2 cut(s) 60, 833
AcsI RAATTY 2 cut(s) 719, 1104
AcuI CTGAAG 2 cut(s) 485, 996
AfaI GTAC 2 cut(s) 316, 819
AfiI CCNNNNNNNGG 2 cut(s) 188, 1340
AgsI TTSAA 8 cut(s) 35, 288, 415, 434, 669, 685, 946, 980
AjnI CCWGG 6 cut(s) 25, 46, 88, 372, 551, 825
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
AluBI AGCT 4 cut(s) 257, 459, 878, 1010
AluI AGCT 4 cut(s) 257, 459, 878, 1010
Alw26I GTCTC 1 cut(s) 1183
AlwI GGATC 2 cut(s) 60, 833
AoxI GGCC 4 cut(s) 178, 190, 333, 1323
ApaI GGGCCC 1 cut(s) 337
ApeKI GCWGC 2 cut(s) 1007, 1352
ApoI RAATTY 2 cut(s) 719, 1104
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
Asp700I GAANNNNTTC 1 cut(s) 1164
AspLEI GCGC 2 cut(s) 774, 1216
AspS9I GGNCC 9 cut(s) 86, 113, 179, 191, 333, 334, 523, 733, 823
AsuHPI GGTGA 4 cut(s) 36, 67, 1376, 1420
AvaII GGWCC 5 cut(s) 86, 113, 523, 733, 823
BaeGI GKGCMC 2 cut(s) 337, 475
BaeI ACNNNNGTAYC 2 cut(s) 747, 780
BanI GGYRCC 2 cut(s) 470, 620
BanII GRGCYC 3 cut(s) 298, 337, 1448
BbsI GAAGAC 1 cut(s) 690
BbvI GCAGC 2 cut(s) 1019, 1364
BccI CCATC 2 cut(s) 602, 1238
BcgI CGANNNNNNTGC 2 cut(s) 602, 636
BciT130I CCWGG 6 cut(s) 27, 48, 90, 374, 553, 827
BcoDI GTCTC 1 cut(s) 1183
BfaI CTAG 1 cut(s) 857
BfmI CTRYAG 2 cut(s) 879, 1374
BglII AGATCT 1 cut(s) 1133
BisI GCNGC 2 cut(s) 1008, 1353
BlsI GCNGC 2 cut(s) 1009, 1354
BmcAI AGTACT 1 cut(s) 316
Bme1390I CCNGG 6 cut(s) 27, 48, 90, 374, 553, 827
Bme18I GGWCC 5 cut(s) 86, 113, 523, 733, 823
BmgT120I GGNCC 9 cut(s) 86, 113, 179, 191, 333, 334, 523, 733, 823
BmiI GGNNCC 5 cut(s) 151, 181, 335, 472, 622
BmrFI CCNGG 6 cut(s) 27, 48, 90, 374, 553, 827
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 9 cut(s) 430, 518, 810, 820, 856, 1040, 1125, 1240, 1274
BmuI ACTGGG 1 cut(s) 177
BpiI GAAGAC 1 cut(s) 690
BpmI CTGGAG 2 cut(s) 273, 279
BsaBI GATNNNNATC 2 cut(s) 34, 1300
BsaI GGTCTC 1 cut(s) 1183
BsaJI CCNNGG 7 cut(s) 47, 373, 526, 551, 552, 659, 1334
Bsc4I CCNNNNNNNGG 2 cut(s) 188, 1340
Bse1I ACTGG 4 cut(s) 100, 183, 286, 1109
Bse3DI GCAATG 1 cut(s) 927
Bse8I GATNNNNATC 2 cut(s) 34, 1300
BseBI CCWGG 6 cut(s) 27, 48, 90, 374, 553, 827
BseDI CCNNGG 7 cut(s) 47, 373, 526, 551, 552, 659, 1334
BseGI GGATG 3 cut(s) 835, 1255, 1419
BseJI GATNNNNATC 2 cut(s) 34, 1300
BseLI CCNNNNNNNGG 2 cut(s) 188, 1340
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 6 cut(s) 323, 352, 495, 793, 979, 1196
BseNI ACTGG 4 cut(s) 100, 183, 286, 1109
BseSI GKGCMC 2 cut(s) 337, 475
BseXI GCAGC 2 cut(s) 1019, 1364
BsgI GTGCAG 1 cut(s) 1422
Bsh1236I CGCG 1 cut(s) 774
BshFI GGCC 4 cut(s) 180, 192, 335, 1325
BshNI GGYRCC 2 cut(s) 470, 620
BslFI GGGAC 2 cut(s) 1357, 1430
BslI CCNNNNNNNGG 2 cut(s) 188, 1340
BsmAI GTCTC 1 cut(s) 1183
BsmFI GGGAC 2 cut(s) 1357, 1430
BsmI GAATGC 2 cut(s) 552, 1280
BsnI GGCC 4 cut(s) 180, 192, 335, 1325
Bso31I GGTCTC 1 cut(s) 1183
Bsp120I GGGCCC 1 cut(s) 333
Bsp1286I GDGCHC 4 cut(s) 298, 337, 475, 1448
Bsp1407I TGTACA 1 cut(s) 817
Bsp143I GATC 4 cut(s) 52, 838, 961, 1133
BspANI GGCC 4 cut(s) 180, 192, 335, 1325
BspCNI CTCAG 6 cut(s) 322, 351, 496, 792, 978, 1195
BspFNI CGCG 1 cut(s) 774
BspHI TCATGA 1 cut(s) 958
BspLI GGNNCC 5 cut(s) 151, 181, 335, 472, 622
BspMAI CTGCAG 1 cut(s) 1378
BspPI GGATC 2 cut(s) 60, 833
BspQI GCTCTTC 1 cut(s) 317
BspT107I GGYRCC 2 cut(s) 470, 620
BspTNI GGTCTC 1 cut(s) 1183
BsrDI GCAATG 1 cut(s) 927
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 4 cut(s) 100, 183, 286, 1109
BssECI CCNNGG 7 cut(s) 47, 373, 526, 551, 552, 659, 1334
BssMI GATC 4 cut(s) 52, 838, 961, 1133
BssT1I CCWWGG 2 cut(s) 526, 659
Bst2UI CCWGG 6 cut(s) 27, 48, 90, 374, 553, 827
Bst4CI ACNGT 6 cut(s) 497, 712, 730, 789, 847, 1177
Bst6I CTCTTC 1 cut(s) 317
BstAUI TGTACA 1 cut(s) 817
BstC8I GCNNGC 2 cut(s) 457, 1263
BstDEI CTNAG 6 cut(s) 309, 338, 504, 779, 965, 1182
BstF5I GGATG 3 cut(s) 835, 1255, 1419
BstFNI CGCG 1 cut(s) 774
BstHHI GCGC 2 cut(s) 774, 1216
BstKTI GATC 4 cut(s) 55, 841, 964, 1136
BstMAI GTCTC 1 cut(s) 1183
BstMBI GATC 4 cut(s) 52, 838, 961, 1133
BstMWI GCNNNNNNNGC 1 cut(s) 875
BstNI CCWGG 6 cut(s) 27, 48, 90, 374, 553, 827
BstNSI RCATGY 2 cut(s) 431, 914
BstSCI CCNGG 6 cut(s) 25, 46, 88, 372, 551, 825
BstSFI CTRYAG 2 cut(s) 879, 1374
BstSLI GKGCMC 2 cut(s) 337, 475
BstUI CGCG 1 cut(s) 774
BstV1I GCAGC 2 cut(s) 1019, 1364
BstV2I GAAGAC 1 cut(s) 690
BstX2I RGATCY 1 cut(s) 1133
BstXI CCANNNNNNTGG 1 cut(s) 123
BstYI RGATCY 1 cut(s) 1133
BsuRI GGCC 4 cut(s) 180, 192, 335, 1325
BtsCI GGATG 3 cut(s) 835, 1255, 1419
BtsIMutI CAGTG 7 cut(s) 190, 279, 461, 501, 787, 852, 973
Cac8I GCNNGC 2 cut(s) 457, 1263
CciI TCATGA 1 cut(s) 958
CfoI GCGC 2 cut(s) 774, 1216
Cfr13I GGNCC 9 cut(s) 86, 113, 179, 191, 333, 334, 523, 733, 823
CseI GACGC 1 cut(s) 763
Csp6I GTAC 2 cut(s) 315, 818
CviAII CATG 6 cut(s) 56, 133, 428, 911, 959, 1217
CviQI GTAC 2 cut(s) 315, 818
DdeI CTNAG 6 cut(s) 309, 338, 504, 779, 965, 1182
DpnI GATC 4 cut(s) 54, 840, 963, 1135
DpnII GATC 4 cut(s) 52, 838, 961, 1133
DraI TTTAAA 2 cut(s) 633, 1300
Eam1104I CTCTTC 1 cut(s) 317
EarI CTCTTC 1 cut(s) 317
Eco130I CCWWGG 2 cut(s) 526, 659
Eco24I GRGCYC 3 cut(s) 298, 337, 1448
Eco31I GGTCTC 1 cut(s) 1183
Eco47I GGWCC 5 cut(s) 86, 113, 523, 733, 823
Eco57I CTGAAG 2 cut(s) 485, 996
EcoO109I RGGNCCY 3 cut(s) 333, 334, 523
EcoRII CCWGG 6 cut(s) 25, 46, 88, 372, 551, 825
EcoT14I CCWWGG 2 cut(s) 526, 659
EcoT38I GRGCYC 3 cut(s) 298, 337, 1448
ErhI CCWWGG 2 cut(s) 526, 659
FaeI CATG 6 cut(s) 59, 136, 431, 914, 962, 1220
FalI AAGNNNNNCTT 2 cut(s) 899, 931
FaqI GGGAC 2 cut(s) 1357, 1430
FatI CATG 6 cut(s) 55, 132, 427, 910, 958, 1216
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 2 cut(s) 1008, 1353
FokI GGATG 3 cut(s) 842, 1262, 1406
FriOI GRGCYC 3 cut(s) 298, 337, 1448
Fsp4HI GCNGC 2 cut(s) 1008, 1353
FspBI CTAG 1 cut(s) 857
GlaI GCGC 2 cut(s) 773, 1215
GluI GCNGC 2 cut(s) 1008, 1353
GsuI CTGGAG 2 cut(s) 273, 279
HaeIII GGCC 4 cut(s) 180, 192, 335, 1325
HgaI GACGC 1 cut(s) 763
HhaI GCGC 2 cut(s) 774, 1216
Hin1II CATG 6 cut(s) 59, 136, 431, 914, 962, 1220
Hin6I GCGC 2 cut(s) 772, 1214
HinP1I GCGC 2 cut(s) 772, 1214
HincII GTYRAC 2 cut(s) 370, 679
HindII GTYRAC 2 cut(s) 370, 679
HinfI GANTC 8 cut(s) 305, 434, 1040, 1051, 1085, 1160, 1226, 1425
HphI GGTGA 4 cut(s) 36, 67, 1376, 1420
Hpy166II GTNNAC 8 cut(s) 44, 86, 105, 344, 370, 493, 679, 785
Hpy188I TCNGA 9 cut(s) 312, 321, 838, 1015, 1056, 1170, 1185, 1338, 1424
Hpy188III TCNNGA 2 cut(s) 252, 959
Hpy8I GTNNAC 8 cut(s) 44, 86, 105, 344, 370, 493, 679, 785
HpyAV CCTTC 8 cut(s) 409, 460, 580, 746, 974, 997, 1333, 1460
HpyCH4III ACNGT 6 cut(s) 497, 712, 730, 789, 847, 1177
HpyCH4V TGCA 7 cut(s) 519, 869, 1116, 1127, 1352, 1376, 1403
HpyF10VI GCNNNNNNNGC 1 cut(s) 875
HpyF3I CTNAG 6 cut(s) 309, 338, 504, 779, 965, 1182
Hsp92II CATG 6 cut(s) 59, 136, 431, 914, 962, 1220
HspAI GCGC 2 cut(s) 772, 1214
Kzo9I GATC 4 cut(s) 52, 838, 961, 1133
LguI GCTCTTC 1 cut(s) 317
LmnI GCTCC 1 cut(s) 254
Lsp1109I GCAGC 2 cut(s) 1019, 1364
LweI GCATC 9 cut(s) 430, 518, 810, 820, 856, 1040, 1125, 1240, 1274
MaeI CTAG 1 cut(s) 857
MaeIII GTNAC 2 cut(s) 497, 706
MalI GATC 4 cut(s) 54, 840, 963, 1135
MboI GATC 4 cut(s) 52, 838, 961, 1133
MboII GAAGA 7 cut(s) 334, 690, 862, 1003, 1006, 1128, 1391
MflI RGATCY 1 cut(s) 1133
MhlI GDGCHC 4 cut(s) 298, 337, 475, 1448
MluCI AATT 6 cut(s) 247, 719, 954, 975, 1078, 1104
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 3 cut(s) 463, 866, 1137
MroXI GAANNNNTTC 1 cut(s) 1164
MseI TTAA 8 cut(s) 632, 917, 936, 974, 1274, 1299, 1410, 1455
MslI CAYNNNNRTG 1 cut(s) 426
MspR9I CCNGG 6 cut(s) 27, 48, 90, 374, 553, 827
Mva1269I GAATGC 2 cut(s) 552, 1280
MvaI CCWGG 6 cut(s) 27, 48, 90, 374, 553, 827
MvnI CGCG 1 cut(s) 774
MwoI GCNNNNNNNGC 1 cut(s) 875
NdeII GATC 4 cut(s) 52, 838, 961, 1133
NlaIII CATG 6 cut(s) 59, 136, 431, 914, 962, 1220
NlaIV GGNNCC 5 cut(s) 151, 181, 335, 472, 622
NmeAIII GCCGAG 1 cut(s) 1190
NmuCI GTSAC 2 cut(s) 497, 706
NspI RCATGY 2 cut(s) 431, 914
PagI TCATGA 1 cut(s) 958
PasI CCCWGGG 1 cut(s) 552
PciSI GCTCTTC 1 cut(s) 317
PctI GAATGC 2 cut(s) 552, 1280
PdmI GAANNNNTTC 1 cut(s) 1164
PfeI GAWTC 7 cut(s) 434, 1040, 1051, 1085, 1160, 1226, 1425
PfoI TCCNGGA 2 cut(s) 25, 825
PkrI GCNGC 2 cut(s) 1009, 1354
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
PpuMI RGGWCCY 1 cut(s) 523
Psp5II RGGWCCY 1 cut(s) 523
Psp6I CCWGG 6 cut(s) 25, 46, 88, 372, 551, 825
PspGI CCWGG 6 cut(s) 25, 46, 88, 372, 551, 825
PspN4I GGNNCC 5 cut(s) 151, 181, 335, 472, 622
PspOMI GGGCCC 1 cut(s) 333
PspPI GGNCC 9 cut(s) 86, 113, 179, 191, 333, 334, 523, 733, 823
PspPPI RGGWCCY 1 cut(s) 523
PstI CTGCAG 1 cut(s) 1378
PsuI RGATCY 1 cut(s) 1133
RsaI GTAC 2 cut(s) 316, 819
RsaNI GTAC 2 cut(s) 315, 818
RseI CAYNNNNRTG 1 cut(s) 426
SalI GTCGAC 1 cut(s) 677
SapI GCTCTTC 1 cut(s) 317
SaqAI TTAA 8 cut(s) 632, 917, 936, 974, 1274, 1299, 1410, 1455
SatI GCNGC 2 cut(s) 1008, 1353
Sau3AI GATC 4 cut(s) 52, 838, 961, 1133
Sau96I GGNCC 9 cut(s) 86, 113, 179, 191, 333, 334, 523, 733, 823
ScaI AGTACT 1 cut(s) 316
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 6 cut(s) 27, 48, 90, 374, 553, 827
SduI GDGCHC 4 cut(s) 298, 337, 475, 1448
SfaNI GCATC 9 cut(s) 430, 518, 810, 820, 856, 1040, 1125, 1240, 1274
SfcI CTRYAG 2 cut(s) 879, 1374
SinI GGWCC 5 cut(s) 86, 113, 523, 733, 823
SmiI ATTTAAAT 1 cut(s) 1300
SmiMI CAYNNNNRTG 1 cut(s) 426
Sse9I AATT 6 cut(s) 247, 719, 954, 975, 1078, 1104
SspMI CTAG 1 cut(s) 857
StyD4I CCNGG 6 cut(s) 25, 46, 88, 372, 551, 825
StyI CCWWGG 2 cut(s) 526, 659
SwaI ATTTAAAT 1 cut(s) 1300
TaaI ACNGT 6 cut(s) 497, 712, 730, 789, 847, 1177
TaqI TCGA 4 cut(s) 298, 678, 864, 1284
TasI AATT 6 cut(s) 247, 719, 954, 975, 1078, 1104
TatI WGTACW 2 cut(s) 314, 817
TfiI GAWTC 7 cut(s) 434, 1040, 1051, 1085, 1160, 1226, 1425
Tru1I TTAA 8 cut(s) 632, 917, 936, 974, 1274, 1299, 1410, 1455
Tru9I TTAA 8 cut(s) 632, 917, 936, 974, 1274, 1299, 1410, 1455
TscAI CASTG 7 cut(s) 190, 286, 468, 508, 787, 852, 973
TseFI GTSAC 2 cut(s) 497, 706
TseI GCWGC 2 cut(s) 1007, 1352
Tsp45I GTSAC 2 cut(s) 497, 706
TspDTI ATGAA 4 cut(s) 27, 230, 558, 947
TspGWI ACGGA 1 cut(s) 126
TspRI CASTG 7 cut(s) 190, 286, 468, 508, 787, 852, 973
VpaK11BI GGWCC 5 cut(s) 86, 113, 523, 733, 823
XapI RAATTY 2 cut(s) 719, 1104
XceI RCATGY 2 cut(s) 431, 914
XmiI GTMKAC 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 1164
XspI CTAG 1 cut(s) 857
ZrmI AGTACT 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.