Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004170

Physical Location & Seq

Genomic Coordinates Reverse (-)

3605126 .. 3608092

Gene Structure 2967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G11450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGCCGAGCCGGAGAAGTGAGTCTGCTATTAGGCTAATTACGTACTCTGAGGAGCTTGTGGATGGAAAACCGTTCTTTGCTTTTTCCAATTGTCTTCCTGTGAAGGCTTTAAACCGTGAACCTGCTGGTCATGCCTTCCATTCTGCTGCGCTTAAACTGCATGGTTGTGCAGAAGAACCCACAGACGATGAAGGTGGTGATAAGAAAGTGGGAGATGATAAAGAGAAGGAATATGTTCCTTCATTCAACTCGTATGCCAACAAAGGAAAGAAGAAGTCTGGTACCCAGCAACAAGACCACTATGCGTTGTTGGGTTTGAGCAATCTAAGATATCTTGCGACGGAAGATCAGATTAGGAAAAGTTATCGTGAAGCTGCATTGAAGCATCATCCTGATAAACTCGCTAGTCTCCTTCTGTTAGAGGAAACAGAAGAAGCCAAGGAGGCAAAAAAAGATGAGATTGAATCTCGCTTCAAAGCGATTCAAGAAGCATATGAGGTATTGATGGACCCAACTAGGAGAAGAATTTTTGACTCCACTGATGAGTTTGATGACGAGGTCCCATCGGATTGCTTGCCGCAAGACTTTTTCAAGGTGTTTGGTCCAGCGTTTAAGAGAAATGCTAGGTGGTCAGTGAATCAGCGTATTCCAGATTTGGGAGATGAAAACACACCACTTAAAGATGTTGATAAGTTCTACAACTTTTGGTACGCTTTCAAGAGTTGGAGGGAATTTCCTGATGAAGAGGAGCATGATCTTGAACAAGCAGATTCCCGTGAAGAACGTAGGTGGATGGAAAAGGAGAATGCAAAAAAAACTGTGAAGGCTAGAAAGGAGGAGCATGCTCGAATCAGGACTCTTGTTGACAATGCGTATAGAAAAGACCCGAGAATTGTGAAAAGAAAAGAGGAAGAAAAGGCTGAGAAGCAACAGAAAAAAGATGCAAAAATTCAGGCCAAGAAGAAGCAGGAAGAGGACGCTGCTATTGCTGCTGAAGAAGAGAAAAGGCGAAAAGAAGAAGAAGAAAAGCGAGCAGCAGAATCTGCACAACAACAAAAGAAAACTAAGGAAAGAGAGAAGAAGCTCTTACGCAAAGAACGAAATCGTCTTAGAACTCTCTCAGCTCCTCTCGTGGCTCAGCGTCTGCTTGACATCTCTGAGGAAGATATAGAGAATCTATGCATGTCACTTAACACCGAGCAGTTGCAGAATCTATGTGATAAAATGGGAAACAAAGAAGGACTAGAATTGGCAAAGGTGATCAAAGATGGATGCAACAGTAGTAGAAATGATGAAGCCGAATCTAAAGAAAAAGTAAGTAAGAAGACCAACGGTGGCACAGAGCCTACAACCCGAGTTTCACAGTTAGATAGTAGCACTCAGAAGAAACAACCATGGAGCAAGGAAGAGATTGATATGCTGAGAAAAGGAATGATAAAATATCCAAAGGGGACATCGCGGAGATGGGAAGTTATTTCAGAGTACATTGGTACAGGAAGATCTGTAGAGGAAATTCTGAAAGCAACTAAAACAGTTCTCCTGCAAAAACCAGATTCAGCTAAAGCATTCGATTCTTTCCTCGAGAAGAGGAAACCCTCTGCTTCAATCACATCCCCTCTCTCCACAAGAGAGGAGCTCGGAGAATCTCTACCCACAATGACGACCACAACAAATGCAAAGCCCTCTAAAGAGACTGTTGTGGGGAAAAGCTCGAGCAGTCAAAGCTCAGACAACAATGGTGAAGTAGGTGGAAGTTCAGACGCAGATAGTTGGTCGACTGTGCAAGAAAGAGCTTTGGTTCAAGCTTTAAAGACATTCCCGAAAGAGACAAGCCAAAGATGGGAGAGAGTAGCTGCAGCTGTCCCTGGTAAAACGATGAACCAATGCAAGAAGAAGTTTGCAGAGCTTAAGGAAATCATTAGAAACAAGAAAACCGGAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030308 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0040008 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045926 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061649 GO:0065007 GO:0080090 GO:0140030 GO:0140035 GO:0140036 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ Myb_DNA-binding

Protein Analysis

647

Amino Acids

73.99

Weight (kDa)

8.64

Isoelectric Point (pI)

59.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	99 - 178	2.9e-15	DnaJ domain
ZUO1-like_ZHD	PF21884	195 - 298	4.2e-40	Zuotin-like, zuotin homology domain
Myb_DNA-binding_2	PF23082	465 - 533	1.7e-27	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	590 - 635	1.6e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11450 AT5G06110 AT5G06110
fragaria_vesca	FvH4_1g11431 FvH4_1g11450 FvH4_2g17680 FvH4_2g17680
malus_domestica	MD05G1158000.v1.1 MD10G1150700.v1.1
prunus_persica	Prupe.8G189400_v2.0.a1
pyrus_communis	pycom05g15000 pycom10g12980
rosa_chinensis	RchiOBHm_Chr2g0099031 RchiOBHm_Chr6g0282661
rosa_laevigata	RLG00000012876 RLG00000016841
rosa_multiflora	Rmu_sc0000577.1_g000016 Rmu_sc0003070.1_g000008 Rmu_sc0009422.1_g000005 Rmu_sc0012099.1_g000006
rosa_roxburghii	Rroxscaffold_2G00143480 Rroxscaffold_7G00186130
rosa_rugosa	Rorug06G0148400
rosa_samantha	Rh2AG125200 Rh2BG128400 Rh2CG129400 Rh2DG129600 Rh6AG261800 Rh6BG264900 Rh6CG264000 Rh6DG256200
rosa_wichuraiana	Rw2G009630 Rw6G022630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	130
Acc65I	GGTACC	1 cut(s)	281
AccB1I	GGYRCC	1 cut(s)	281
AccI	GTMKAC	1 cut(s)	1775
AccII	CGCG	1 cut(s)	1459
AciI	CCGC	2 cut(s)	578, 1459
AcsI	RAATTY	4 cut(s)	525, 731, 948, 1512
AcuI	CTGAAG	1 cut(s)	1014
AfaI	GTAC	5 cut(s)	44, 283, 710, 1484, 1492
AfiI	CCNNNNNNNGG	2 cut(s)	656, 1840
AflII	CTTAAG	1 cut(s)	1907
AjnI	CCWGG	1 cut(s)	1864
Alw21I	GWGCWC	1 cut(s)	1638
Alw26I	GTCTC	3 cut(s)	413, 1685, 1820
AlwNI	CAGNNNCTG	2 cut(s)	1043, 1144
Ama87I	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
AoxI	GGCC	1 cut(s)	954
ApeKI	GCWGC	7 cut(s)	146, 374, 980, 989, 1034, 1853, 1856
ApoI	RAATTY	4 cut(s)	525, 731, 948, 1512
Asp700I	GAANNNNTTC	1 cut(s)	234
Asp718I	GGTACC	1 cut(s)	281
AspLEI	GCGC	1 cut(s)	151
AspS9I	GGNCC	3 cut(s)	508, 559, 602
AsuHPI	GGTGA	3 cut(s)	209, 1270, 1751
AvaI	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
AvaII	GGWCC	3 cut(s)	508, 559, 602
BanI	GGYRCC	1 cut(s)	281
BanII	GRGCYC	1 cut(s)	1638
BauI	CACGAG	1 cut(s)	1130
BbsI	GAAGAC	2 cut(s)	86, 1331
Bbv12I	GWGCWC	1 cut(s)	1638
BbvI	GCAGC	7 cut(s)	133, 361, 967, 976, 1046, 1840, 1868
BccI	CCATC	7 cut(s)	56, 499, 571, 787, 1262, 1458, 1833
BciT130I	CCWGG	1 cut(s)	1866
BclI	TGATCA	1 cut(s)	1260
BcoDI	GTCTC	3 cut(s)	413, 1685, 1820
BfaI	CTAG	5 cut(s)	405, 516, 624, 828, 1244
BfmI	CTRYAG	2 cut(s)	1503, 1854
BfrI	CTTAAG	1 cut(s)	1907
BfuAI	ACCTGC	1 cut(s)	130
BglI	GCCNNNNNGGC	1 cut(s)	443
BglII	AGATCT	1 cut(s)	1499
BisI	GCNGC	8 cut(s)	147, 375, 578, 981, 990, 1035, 1854, 1857
BlpI	GCTNAGC	1 cut(s)	1137
BlsI	GCNGC	8 cut(s)	148, 376, 579, 982, 991, 1036, 1855, 1858
Bme1390I	CCNGG	1 cut(s)	1866
Bme18I	GGWCC	3 cut(s)	508, 559, 602
BmeT110I	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
BmgT120I	GGNCC	3 cut(s)	508, 559, 602
BmiI	GGNNCC	3 cut(s)	283, 510, 561
BmrFI	CCNGG	1 cut(s)	1866
BmsI	GCATC	3 cut(s)	394, 931, 1262
BpiI	GAAGAC	2 cut(s)	86, 1331
BplI	GAGNNNNNCTC	2 cut(s)	1620, 1652
Bpu1102I	GCTNAGC	1 cut(s)	1137
BsaAI	YACGTR	1 cut(s)	42
BsaJI	CCNNGG	3 cut(s)	438, 1394, 1864
BsaWI	WCCGGW	1 cut(s)	1934
Bsc4I	CCNNNNNNNGG	2 cut(s)	656, 1840
BseBI	CCWGG	1 cut(s)	1866
BseDI	CCNNGG	3 cut(s)	438, 1394, 1864
BseGI	GGATG	5 cut(s)	67, 388, 798, 1277, 1610
BseLI	CCNNNNNNNGG	2 cut(s)	656, 1840
BseMII	CTCAG	8 cut(s)	39, 912, 1134, 1149, 1151, 1394, 1412, 1740
BseRI	GAGGAG	5 cut(s)	65, 761, 851, 1116, 1646
BseXI	GCAGC	7 cut(s)	133, 361, 967, 976, 1046, 1840, 1868
BseYI	CCCAGC	1 cut(s)	285
BsgI	GTGCAG	2 cut(s)	189, 1029
Bsh1236I	CGCG	1 cut(s)	1459
BshFI	GGCC	1 cut(s)	956
BshNI	GGYRCC	1 cut(s)	281
BsiHKAI	GWGCWC	1 cut(s)	1638
BsiHKCI	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
BsiSI	CCGG	2 cut(s)	10, 1935
BslFI	GGGAC	3 cut(s)	545, 1465, 1847
BslI	CCNNNNNNNGG	2 cut(s)	656, 1840
BsmAI	GTCTC	3 cut(s)	413, 1685, 1820
BsmFI	GGGAC	3 cut(s)	545, 1465, 1847
BsmI	GAATGC	2 cut(s)	811, 1565
BsnI	GGCC	1 cut(s)	956
BsoBI	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
Bsp1286I	GDGCHC	1 cut(s)	1638
Bsp143I	GATC	4 cut(s)	346, 754, 1260, 1499
Bsp1720I	GCTNAGC	1 cut(s)	1137
Bsp19I	CCATGG	1 cut(s)	1394
BspACI	CCGC	2 cut(s)	578, 1459
BspANI	GGCC	1 cut(s)	956
BspCNI	CTCAG	8 cut(s)	40, 913, 1133, 1150, 1150, 1393, 1413, 1739
BspFNI	CGCG	1 cut(s)	1459
BspLI	GGNNCC	3 cut(s)	283, 510, 561
BspMAI	CTGCAG	1 cut(s)	1858
BspMI	ACCTGC	1 cut(s)	130
BspT107I	GGYRCC	1 cut(s)	281
BspTI	CTTAAG	1 cut(s)	1907
BssECI	CCNNGG	3 cut(s)	438, 1394, 1864
BssMI	GATC	4 cut(s)	346, 754, 1260, 1499
BssSI	CACGAG	1 cut(s)	1130
BssT1I	CCWWGG	2 cut(s)	438, 1394
Bst2BI	CACGAG	1 cut(s)	1130
Bst2UI	CCWGG	1 cut(s)	1866
Bst4CI	ACNGT	9 cut(s)	72, 116, 820, 1280, 1334, 1365, 1534, 1696, 1780
Bst6I	CTCTTC	5 cut(s)	738, 966, 993, 1401, 1580
BstAFI	CTTAAG	1 cut(s)	1907
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstBAI	YACGTR	1 cut(s)	42
BstC8I	GCNNGC	3 cut(s)	575, 843, 1032
BstDSI	CCRYGG	1 cut(s)	1394
BstF5I	GGATG	5 cut(s)	67, 388, 798, 1277, 1610
BstFNI	CGCG	1 cut(s)	1459
BstHHI	GCGC	1 cut(s)	151
BstKTI	GATC	4 cut(s)	349, 757, 1263, 1502
BstMAI	GTCTC	3 cut(s)	413, 1685, 1820
BstMBI	GATC	4 cut(s)	346, 754, 1260, 1499
BstMWI	GCNNNNNNNGC	7 cut(s)	131, 157, 443, 986, 989, 1043, 1722
BstNI	CCWGG	1 cut(s)	1866
BstNSI	RCATGY	2 cut(s)	845, 1186
BstSCI	CCNGG	1 cut(s)	1864
BstSFI	CTRYAG	2 cut(s)	1503, 1854
BstSNI	TACGTA	1 cut(s)	42
BstUI	CGCG	1 cut(s)	1459
BstV1I	GCAGC	7 cut(s)	133, 361, 967, 976, 1046, 1840, 1868
BstV2I	GAAGAC	2 cut(s)	86, 1331
BstX2I	RGATCY	1 cut(s)	1499
BstYI	RGATCY	1 cut(s)	1499
BsuRI	GGCC	1 cut(s)	956
BtgI	CCRYGG	1 cut(s)	1394
BtgZI	GCGATG	1 cut(s)	1440
BtsCI	GGATG	5 cut(s)	67, 388, 798, 1277, 1610
BtsIMutI	CAGTG	2 cut(s)	537, 639
BveI	ACCTGC	1 cut(s)	130
Cac8I	GCNNGC	3 cut(s)	575, 843, 1032
CaiI	CAGNNNCTG	2 cut(s)	1043, 1144
CfoI	GCGC	1 cut(s)	151
Cfr13I	GGNCC	3 cut(s)	508, 559, 602
CseI	GACGC	3 cut(s)	986, 1130, 1769
Csp6I	GTAC	5 cut(s)	43, 282, 709, 1483, 1491
CviAII	CATG	6 cut(s)	131, 161, 752, 842, 1183, 1395
CviQI	GTAC	5 cut(s)	43, 282, 709, 1483, 1491
DpnI	GATC	4 cut(s)	348, 756, 1262, 1501
DpnII	GATC	4 cut(s)	346, 754, 1260, 1499
DraI	TTTAAA	2 cut(s)	111, 1809
Eam1104I	CTCTTC	5 cut(s)	738, 966, 993, 1401, 1580
EarI	CTCTTC	5 cut(s)	738, 966, 993, 1401, 1580
Ecl136II	GAGCTC	1 cut(s)	1636
Eco105I	TACGTA	1 cut(s)	42
Eco130I	CCWWGG	2 cut(s)	438, 1394
Eco24I	GRGCYC	1 cut(s)	1638
Eco32I	GATATC	1 cut(s)	332
Eco47I	GGWCC	3 cut(s)	508, 559, 602
Eco53kI	GAGCTC	1 cut(s)	1636
Eco57I	CTGAAG	1 cut(s)	1014
Eco88I	CYCGRG	4 cut(s)	886, 1353, 1580, 1711
EcoICRI	GAGCTC	1 cut(s)	1636
EcoO109I	RGGNCCY	1 cut(s)	559
EcoRII	CCWGG	1 cut(s)	1864
EcoRV	GATATC	1 cut(s)	332
EcoT14I	CCWWGG	2 cut(s)	438, 1394
EcoT22I	ATGCAT	1 cut(s)	1184
EcoT38I	GRGCYC	1 cut(s)	1638
ErhI	CCWWGG	2 cut(s)	438, 1394
FaeI	CATG	6 cut(s)	134, 164, 755, 845, 1186, 1398
FalI	AAGNNNNNCTT	2 cut(s)	1070, 1102
FaqI	GGGAC	3 cut(s)	545, 1465, 1847
FatI	CATG	6 cut(s)	130, 160, 751, 841, 1182, 1394
FauNDI	CATATG	1 cut(s)	493
FbaI	TGATCA	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	1775
Fnu4HI	GCNGC	8 cut(s)	147, 375, 578, 981, 990, 1035, 1854, 1857
FokI	GGATG	5 cut(s)	74, 375, 805, 1284, 1597
FriOI	GRGCYC	1 cut(s)	1638
Fsp4HI	GCNGC	8 cut(s)	147, 375, 578, 981, 990, 1035, 1854, 1857
FspBI	CTAG	5 cut(s)	405, 516, 624, 828, 1244
GlaI	GCGC	1 cut(s)	150
GluI	GCNGC	8 cut(s)	147, 375, 578, 981, 990, 1035, 1854, 1857
GsaI	CCCAGC	1 cut(s)	289
HaeIII	GGCC	1 cut(s)	956
HapII	CCGG	2 cut(s)	10, 1935
HgaI	GACGC	3 cut(s)	986, 1130, 1769
HhaI	GCGC	1 cut(s)	151
Hin1II	CATG	6 cut(s)	134, 164, 755, 845, 1186, 1398
Hin6I	GCGC	1 cut(s)	149
HinP1I	GCGC	1 cut(s)	149
HincII	GTYRAC	2 cut(s)	865, 1776
HindII	GTYRAC	2 cut(s)	865, 1776
HindIII	AAGCTT	1 cut(s)	1803
HpaII	CCGG	2 cut(s)	10, 1935
HphI	GGTGA	3 cut(s)	209, 1270, 1751
Hpy166II	GTNNAC	3 cut(s)	119, 865, 1776
Hpy8I	GTNNAC	3 cut(s)	119, 865, 1776
Hpy99I	CGWCG	1 cut(s)	343
HpyAV	CCTTC	8 cut(s)	97, 145, 185, 220, 249, 422, 817, 1232
HpyCH4III	ACNGT	9 cut(s)	72, 116, 820, 1280, 1334, 1365, 1534, 1696, 1780
HpyCH4IV	ACGT	2 cut(s)	41, 784
HpyF10VI	GCNNNNNNNGC	7 cut(s)	131, 157, 443, 986, 989, 1043, 1722
HpySE526I	ACGT	2 cut(s)	41, 784
Hsp92II	CATG	6 cut(s)	134, 164, 755, 845, 1186, 1398
HspAI	GCGC	1 cut(s)	149
KpnI	GGTACC	1 cut(s)	285
Ksp22I	TGATCA	1 cut(s)	1260
Kzo9I	GATC	4 cut(s)	346, 754, 1260, 1499
LmnI	GCTCC	6 cut(s)	52, 748, 838, 1129, 1398, 1633
Lsp1109I	GCAGC	7 cut(s)	133, 361, 967, 976, 1046, 1840, 1868
LweI	GCATC	3 cut(s)	394, 931, 1262
MaeI	CTAG	5 cut(s)	405, 516, 624, 828, 1244
MaeII	ACGT	2 cut(s)	41, 784
MaeIII	GTNAC	1 cut(s)	1185
MalI	GATC	4 cut(s)	348, 756, 1262, 1501
MboI	GATC	4 cut(s)	346, 754, 1260, 1499
MfeI	CAATTG	1 cut(s)	88
MflI	RGATCY	1 cut(s)	1499
MhlI	GDGCHC	1 cut(s)	1638
MluCI	AATT	8 cut(s)	36, 88, 525, 731, 891, 948, 1247, 1512
MlyI	GAGTC	3 cut(s)	29, 527, 850
MmeI	TCCRAC	1 cut(s)	704
Mph1103I	ATGCAT	1 cut(s)	1184
MroXI	GAANNNNTTC	1 cut(s)	234
MseI	TTAA	7 cut(s)	110, 153, 612, 678, 1191, 1808, 1908
MslI	CAYNNNNRTG	1 cut(s)	165
MspA1I	CMGCKG	1 cut(s)	1859
MspCI	CTTAAG	1 cut(s)	1907
MspI	CCGG	2 cut(s)	10, 1935
MspR9I	CCNGG	1 cut(s)	1866
MunI	CAATTG	1 cut(s)	88
Mva1269I	GAATGC	2 cut(s)	811, 1565
MvaI	CCWGG	1 cut(s)	1866
MvnI	CGCG	1 cut(s)	1459
MwoI	GCNNNNNNNGC	7 cut(s)	131, 157, 443, 986, 989, 1043, 1722
NcoI	CCATGG	1 cut(s)	1394
NdeI	CATATG	1 cut(s)	493
NdeII	GATC	4 cut(s)	346, 754, 1260, 1499
NlaIII	CATG	6 cut(s)	134, 164, 755, 845, 1186, 1398
NlaIV	GGNNCC	3 cut(s)	283, 510, 561
NmeAIII	GCCGAG	1 cut(s)	30
NmuCI	GTSAC	1 cut(s)	1185
NsiI	ATGCAT	1 cut(s)	1184
NspI	RCATGY	2 cut(s)	845, 1186
PaeI	GCATGC	1 cut(s)	845
PaeR7I	CTCGAG	2 cut(s)	1580, 1711
PcsI	WCGNNNNNNNCGW	1 cut(s)	1096
PctI	GAATGC	2 cut(s)	811, 1565
PdmI	GAANNNNTTC	1 cut(s)	234
PflFI	GACNNNGTC	1 cut(s)	557
PkrI	GCNGC	8 cut(s)	148, 376, 579, 982, 991, 1036, 1855, 1858
PleI	GAGTC	3 cut(s)	28, 527, 850
PpsI	GAGTC	3 cut(s)	28, 527, 850
Ppu21I	YACGTR	1 cut(s)	42
PpuMI	RGGWCCY	1 cut(s)	559
Psp124BI	GAGCTC	1 cut(s)	1638
Psp5II	RGGWCCY	1 cut(s)	559
Psp6I	CCWGG	1 cut(s)	1864
PspFI	CCCAGC	1 cut(s)	285
PspGI	CCWGG	1 cut(s)	1864
PspN4I	GGNNCC	3 cut(s)	283, 510, 561
PspPI	GGNCC	3 cut(s)	508, 559, 602
PspPPI	RGGWCCY	1 cut(s)	559
PspXI	VCTCGAGB	1 cut(s)	1711
PstI	CTGCAG	1 cut(s)	1858
PstNI	CAGNNNCTG	2 cut(s)	1043, 1144
PsuI	RGATCY	1 cut(s)	1499
PsyI	GACNNNGTC	1 cut(s)	557
PvuII	CAGCTG	1 cut(s)	1859
RsaI	GTAC	5 cut(s)	44, 283, 710, 1484, 1492
RsaNI	GTAC	5 cut(s)	43, 282, 709, 1483, 1491
RseI	CAYNNNNRTG	1 cut(s)	165
SacI	GAGCTC	1 cut(s)	1638
SalI	GTCGAC	1 cut(s)	1774
SaqAI	TTAA	7 cut(s)	110, 153, 612, 678, 1191, 1808, 1908
SatI	GCNGC	8 cut(s)	147, 375, 578, 981, 990, 1035, 1854, 1857
Sau3AI	GATC	4 cut(s)	346, 754, 1260, 1499
Sau96I	GGNCC	3 cut(s)	508, 559, 602
SchI	GAGTC	3 cut(s)	29, 527, 850
ScrFI	CCNGG	1 cut(s)	1866
SduI	GDGCHC	1 cut(s)	1638
SfaNI	GCATC	3 cut(s)	394, 931, 1262
SfcI	CTRYAG	2 cut(s)	1503, 1854
Sfr274I	CTCGAG	2 cut(s)	1580, 1711
SinI	GGWCC	3 cut(s)	508, 559, 602
SlaI	CTCGAG	2 cut(s)	1580, 1711
SmiMI	CAYNNNNRTG	1 cut(s)	165
SmlI	CTYRAG	3 cut(s)	1580, 1711, 1907
SmoI	CTYRAG	3 cut(s)	1580, 1711, 1907
SnaBI	TACGTA	1 cut(s)	42
SphI	GCATGC	1 cut(s)	845
Sse9I	AATT	8 cut(s)	36, 88, 525, 731, 891, 948, 1247, 1512
SsiI	CCGC	2 cut(s)	578, 1459
SspMI	CTAG	5 cut(s)	405, 516, 624, 828, 1244
SstI	GAGCTC	1 cut(s)	1638
StyD4I	CCNGG	1 cut(s)	1864
StyI	CCWWGG	2 cut(s)	438, 1394
TaaI	ACNGT	9 cut(s)	72, 116, 820, 1280, 1334, 1365, 1534, 1696, 1780
TaiI	ACGT	2 cut(s)	44, 787
TaqI	TCGA	5 cut(s)	847, 1569, 1581, 1712, 1775
TasI	AATT	8 cut(s)	36, 88, 525, 731, 891, 948, 1247, 1512
TatI	WGTACW	1 cut(s)	1482
TauI	GCSGC	1 cut(s)	580
Tru1I	TTAA	7 cut(s)	110, 153, 612, 678, 1191, 1808, 1908
Tru9I	TTAA	7 cut(s)	110, 153, 612, 678, 1191, 1808, 1908
TscAI	CASTG	2 cut(s)	544, 639
TseFI	GTSAC	1 cut(s)	1185
TseI	GCWGC	7 cut(s)	146, 374, 980, 989, 1034, 1853, 1856
Tsp45I	GTSAC	1 cut(s)	1185
TspDTI	ATGAA	6 cut(s)	204, 231, 678, 756, 1308, 1892
TspGWI	ACGGA	1 cut(s)	356
TspRI	CASTG	2 cut(s)	544, 639
Tth111I	GACNNNGTC	1 cut(s)	557
Vha464I	CTTAAG	1 cut(s)	1907
VpaK11BI	GGWCC	3 cut(s)	508, 559, 602
XapI	RAATTY	4 cut(s)	525, 731, 948, 1512
XceI	RCATGY	2 cut(s)	845, 1186
XhoI	CTCGAG	2 cut(s)	1580, 1711
XmiI	GTMKAC	1 cut(s)	1775
XmnI	GAANNNNTTC	1 cut(s)	234
XspI	CTAG	5 cut(s)	405, 516, 624, 828, 1244
Zsp2I	ATGCAT	1 cut(s)	1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.