Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004170

Physical Location & Seq

Genomic Coordinates Forward (+)

23739325 .. 23742637

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1150700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGCCTTTCCAAAGCAAGTTTCGCCTTATTTCGTACTCCCAAGAGTTGGTAGATGGTCAACCGCTGTATGCTTCTTCAAACTGCCTTCCTGTCAAGGCTTTGAATCGTGAACCAGCCGGGCATTCTTTCCATGCTGTCGCTCTGAAGCTTCGTGGGTGTGTGGAGGAAAAGAAAGAAGTTGAAGATGAGAAGGTGGTTAATAACAAGGAACAGACTTCTATACCATCATTTGATTCGTACAGCAGCAAAGGTAAGAAGAAATCTGGTGGCGAAGGCAAGGAACAAGATCACTATGCACTGTTAGGTTTGAGTCATTTAAGATACCTTGCAACTGAGGAGCAGATAAGAAAAAGCTATCGTGAGACTGCCCTGAAATACCACCCTGACAAACAGGCTTCTCTTCTTCTCAATGAGGAAACTGAAGCTGCAAAACAAACAAAGAAGGACGAGATAGAGGGTCACTTTAAGTCCATCCAAGAAGCGTATGAGGTGTTAATTGATCCTGTGAAGAGAAGGATCTATGACTCCACTGATGAGTTTGATGATGAGATCCCCACTGAATGTGCCCCACAGGACTTCTTCAGAGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCAGTTAACCAACCAATCCCATTTTTAGGCGATGAGAATACTCCACTGAAGGAAGTAGACAATTTCTATGACTTCTGGTACCCCTTCAAGAGTTGGAGAGAGTTCCCACATGCTGACGAGTTTGATCTTGAGCAAGCGGAGTCTCGTGACCATAAGAGATGGATGGAGAGGCAGAATGCAAAACTTTCAGAAAAGGCTAGGAAGGAGGAGTATGCACGAATTCGTACTCTTGTTGACAATGCATATAAAAGAGACCCGAGAATACAGAGAAGAAAGGAAGCAGAGAAAGCTGAGAAGCAGAGGAAAAAAGAGGCCAAATATATGGCCAAGAAATTACAGGAGGAGGAAGCAGCCAGGGCTGCAGAAGAGGAGAGGAGACGGAAAGAGGAGGATGCCAAACGAGCTGCAGAAACAGCTTTACAGCAGAAGAAGCTGAAGGAGAAAGAGAAGAAGCTCCTGCGGAAAGAGCGGGCTCGCCTTCGAACAGTTTCAGGGCCTGTTACTTCGAAGCGTTTGCTCAATCTTTCTGAGGATGATGTGGAAAGTCTCTGTTCGTCTGTTGGCACCGAGCAGCTTAGGAGTATATGTGAGAAGATGGAGGGCAAAGAGGGGCTGGAGAGAGCAGAAGTCCTTAGAGATGCATGTGGATATAAAGACGATTTGGTGGGTAAGAAAGAAGAAGAGAAGAAAGCAGAACAACAGAATGGTTCCGTGAAGTCCAATGGTACCGTTCAGTTAGCCAGCTATGAGAAGAAGGAAGAGAAGCCTTGGATCAGAGAAGAAATTGAGCTTTTGAGAAAAGGAATGGTAAAATTTCCAAAAGGAACATCTCGGAGGTGGGAGGTTGTTTCAGATTATATTGGTACTGGAAGATCCGTTGAAGAAATTTTGAAGGCAACAAAAACAGTCCTCCTCCAGAAACCTGATTCTAGCAAAGCTTTTGATTCTTTTCTTGAAAAAAGGAAACCCTCACCATCTATCGCTTCTCCACTTACTACCAGAGTTGAAGTAGAAGGGGTACCGACTACTCAGGCCACTGAAACACCTGCCGTGAAGACAGATGAAGCGGGAGAGTCGTCAAGCGTAAGTGCAAAAGACCAAACTCCTACATATCCGATTGTTGAAAATGGATTGTTGTCAGGTTCCGAGCAAGATGTATGGTCTGCTGTACAAGAAAAAGCGCTGGTTCAGGCTCTGAAAACCTTTCCAAAGGAAGCCGCTCAGCGTTGGGAGCGAGTTGCTGCTGCTGTTCCGGGGAAGTCTGTGGTTCAATGCAAGAAGAAATTTGCGTTGCTGAAGGAAAGCTTTAGAAACAAGAAGAGTACCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030308 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0040008 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045926 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061649 GO:0065007 GO:0080090 GO:0140030 GO:0140035 GO:0140036 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ Myb_DNA-binding

Protein Analysis

651

Amino Acids

74.44

Weight (kDa)

8.78

Isoelectric Point (pI)

59.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	96 - 175	7.5e-17	DnaJ domain
ZUO1-like_ZHD	PF21884	192 - 296	2.7e-41	Zuotin-like, zuotin homology domain
Myb_DNA-binding_2	PF23082	462 - 531	1.3e-26	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11450 AT5G06110 AT5G06110
fragaria_vesca	FvH4_1g11431 FvH4_1g11450 FvH4_2g17680 FvH4_2g17680
malus_domestica	MD05G1158000.v1.1 MD10G1150700.v1.1
prunus_persica	Prupe.8G189400_v2.0.a1
pyrus_communis	pycom05g15000 pycom10g12980
rosa_chinensis	RchiOBHm_Chr2g0099031 RchiOBHm_Chr6g0282661
rosa_laevigata	RLG00000012876 RLG00000016841
rosa_multiflora	Rmu_sc0000577.1_g000016 Rmu_sc0003070.1_g000008 Rmu_sc0009422.1_g000005 Rmu_sc0012099.1_g000006
rosa_roxburghii	Rroxscaffold_2G00143480 Rroxscaffold_7G00186130
rosa_rugosa	Rorug06G0148400
rosa_samantha	Rh2AG125200 Rh2BG128400 Rh2CG129400 Rh2DG129600 Rh6AG261800 Rh6BG264900 Rh6CG264000 Rh6DG256200
rosa_wichuraiana	Rw2G009630 Rw6G022630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1675
Acc36I	ACCTGC	1 cut(s)	1675
Acc65I	GGTACC	3 cut(s)	699, 1346, 1639
AccB1I	GGYRCC	4 cut(s)	699, 1184, 1346, 1639
AccB7I	CCANNNNNTGG	1 cut(s)	46
AccBSI	CCGCTC	2 cut(s)	1090, 1841
AccI	GTMKAC	1 cut(s)	678
AciI	CCGC	8 cut(s)	62, 616, 758, 1081, 1090, 1688, 1839, 1947
AclWI	GGATC	5 cut(s)	494, 524, 544, 1400, 1488
AcoI	YGGCCR	1 cut(s)	945
AcsI	RAATTY	4 cut(s)	840, 1433, 1506, 1904
AcuI	CTGAAG	6 cut(s)	164, 441, 565, 689, 1076, 1937
AfaI	GTAC	9 cut(s)	35, 239, 701, 847, 1348, 1486, 1641, 1791, 1945
AfeI	AGCGCT	1 cut(s)	1803
AfiI	CCNNNNNNNGG	2 cut(s)	46, 647
AjnI	CCWGG	1 cut(s)	974
AjuI	GAANNNNNNNTTGG	1 cut(s)	35
Alw26I	GTCTC	5 cut(s)	356, 768, 867, 991, 1172
AlwI	GGATC	5 cut(s)	494, 524, 544, 1400, 1488
AlwNI	CAGNNNCTG	2 cut(s)	1118, 1816
Ama87I	CYCGRG	1 cut(s)	877
Aor51HI	AGCGCT	1 cut(s)	1803
AoxI	GGCC	4 cut(s)	933, 945, 1115, 1653
ApeKI	GCWGC	8 cut(s)	243, 425, 971, 980, 1025, 1192, 1862, 1865
ApoI	RAATTY	4 cut(s)	840, 1433, 1506, 1904
Asp700I	GAANNNNTTC	1 cut(s)	1108
Asp718I	GGTACC	3 cut(s)	699, 1346, 1639
AspLEI	GCGC	1 cut(s)	1804
AspS9I	GGNCC	2 cut(s)	593, 1115
AsuC2I	CCSGG	2 cut(s)	118, 1875
AsuHPI	GGTGA	1 cut(s)	1584
AsuII	TTCGAA	2 cut(s)	1102, 1127
AvaI	CYCGRG	1 cut(s)	877
AvaII	GGWCC	1 cut(s)	593
BaeGI	GKGCMC	1 cut(s)	568
BalI	TGGCCA	1 cut(s)	947
BanI	GGYRCC	4 cut(s)	699, 1184, 1346, 1639
BanII	GRGCYC	1 cut(s)	1096
BauI	CACGAG	1 cut(s)	765
BbsI	GAAGAC	1 cut(s)	1682
BbvI	GCAGC	8 cut(s)	255, 412, 967, 983, 1012, 1204, 1849, 1852
BccI	CCATC	7 cut(s)	47, 232, 479, 774, 778, 1210, 1603
BceAI	ACGGC	1 cut(s)	1655
BcgI	CGANNNNNNTGC	2 cut(s)	1117, 1151
BciT130I	CCWGG	1 cut(s)	976
BcnI	CCSGG	2 cut(s)	118, 1875
BcoDI	GTCTC	5 cut(s)	356, 768, 867, 991, 1172
BfaI	CTAG	2 cut(s)	819, 1551
BfmI	CTRYAG	2 cut(s)	981, 1026
BfoI	RGCGCY	1 cut(s)	1805
BfuAI	ACCTGC	1 cut(s)	1675
BisI	GCNGC	9 cut(s)	244, 426, 972, 981, 1026, 1193, 1839, 1863, 1866
BlpI	GCTNAGC	1 cut(s)	1842
BlsI	GCNGC	9 cut(s)	245, 427, 973, 982, 1027, 1194, 1840, 1864, 1867
Bme1390I	CCNGG	3 cut(s)	118, 976, 1875
Bme18I	GGWCC	1 cut(s)	593
BmeT110I	CYCGRG	1 cut(s)	877
BmgT120I	GGNCC	2 cut(s)	593, 1115
BmiI	GGNNCC	6 cut(s)	701, 1186, 1330, 1348, 1641, 1765
BmrFI	CCNGG	3 cut(s)	118, 976, 1875
BmsI	GCATC	2 cut(s)	1003, 1249
BpiI	GAAGAC	1 cut(s)	1682
BpmI	CTGGAG	2 cut(s)	1256, 1520
Bpu10I	CCTNAGC	1 cut(s)	1196
Bpu1102I	GCTNAGC	1 cut(s)	1842
Bpu14I	TTCGAA	2 cut(s)	1102, 1127
BpuEI	CTTGAG	1 cut(s)	770
BpuMI	CCSGG	2 cut(s)	118, 1875
BsaI	GGTCTC	1 cut(s)	867
BsaJI	CCNNGG	3 cut(s)	975, 1388, 1874
BsaXI	ACNNNNNCTCC	2 cut(s)	1192, 1222
Bsc4I	CCNNNNNNNGG	2 cut(s)	46, 647
Bse1I	ACTGG	1 cut(s)	1492
BseBI	CCWGG	1 cut(s)	976
BseDI	CCNNGG	3 cut(s)	975, 1388, 1874
BseGI	GGATG	4 cut(s)	471, 789, 1018, 1159
BseLI	CCNNNNNNNGG	2 cut(s)	46, 647
BseMII	CTCAG	5 cut(s)	324, 903, 1140, 1664, 1856
BseNI	ACTGG	1 cut(s)	1492
BseRI	GAGGAG	7 cut(s)	350, 842, 977, 1004, 1009, 1022, 1523
BseSI	GKGCMC	1 cut(s)	568
BseXI	GCAGC	8 cut(s)	255, 412, 967, 983, 1012, 1204, 1849, 1852
BshFI	GGCC	4 cut(s)	935, 947, 1117, 1655
BshNI	GGYRCC	4 cut(s)	699, 1184, 1346, 1639
BsiHKCI	CYCGRG	1 cut(s)	877
BsiSI	CCGG	2 cut(s)	117, 1874
BslI	CCNNNNNNNGG	2 cut(s)	46, 647
BsmAI	GTCTC	5 cut(s)	356, 768, 867, 991, 1172
BsmBI	CGTCTC	1 cut(s)	991
BsmI	GAATGC	2 cut(s)	121, 802
BsnI	GGCC	4 cut(s)	935, 947, 1117, 1655
Bso31I	GGTCTC	1 cut(s)	867
BsoBI	CYCGRG	1 cut(s)	877
Bsp119I	TTCGAA	2 cut(s)	1102, 1127
Bsp1286I	GDGCHC	2 cut(s)	568, 1096
Bsp1407I	TGTACA	1 cut(s)	1789
Bsp143I	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
Bsp1720I	GCTNAGC	1 cut(s)	1842
BspACI	CCGC	8 cut(s)	62, 616, 758, 1081, 1090, 1688, 1839, 1947
BspANI	GGCC	4 cut(s)	935, 947, 1117, 1655
BspCNI	CTCAG	5 cut(s)	325, 904, 1141, 1663, 1855
BspLI	GGNNCC	6 cut(s)	701, 1186, 1330, 1348, 1641, 1765
BspMAI	CTGCAG	2 cut(s)	985, 1030
BspMI	ACCTGC	1 cut(s)	1675
BspPI	GGATC	5 cut(s)	494, 524, 544, 1400, 1488
BspT104I	TTCGAA	2 cut(s)	1102, 1127
BspT107I	GGYRCC	4 cut(s)	699, 1184, 1346, 1639
BspTNI	GGTCTC	1 cut(s)	867
BsrBI	CCGCTC	2 cut(s)	1090, 1841
BsrGI	TGTACA	1 cut(s)	1789
BsrI	ACTGG	1 cut(s)	1492
BssECI	CCNNGG	3 cut(s)	975, 1388, 1874
BssMI	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
BssSI	CACGAG	1 cut(s)	765
BssT1I	CCWWGG	1 cut(s)	1388
Bst2BI	CACGAG	1 cut(s)	765
Bst2UI	CCWGG	1 cut(s)	976
Bst4CI	ACNGT	4 cut(s)	300, 1108, 1351, 1528
Bst6I	CTCTTC	6 cut(s)	405, 503, 981, 1296, 1374, 1934
BstAUI	TGTACA	1 cut(s)	1789
BstBI	TTCGAA	2 cut(s)	1102, 1127
BstC8I	GCNNGC	4 cut(s)	756, 1092, 1096, 1363
BstDEI	CTNAG	7 cut(s)	333, 912, 1149, 1196, 1253, 1650, 1842
BstF5I	GGATG	4 cut(s)	471, 789, 1018, 1159
BstH2I	RGCGCY	1 cut(s)	1805
BstHHI	GCGC	1 cut(s)	1804
BstKTI	GATC	7 cut(s)	289, 502, 519, 552, 748, 1395, 1496
BstMAI	GTCTC	5 cut(s)	356, 768, 867, 991, 1172
BstMBI	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
BstMWI	GCNNNNNNNGC	9 cut(s)	21, 908, 977, 980, 1022, 1034, 1051, 1087, 1852
BstNI	CCWGG	1 cut(s)	976
BstNSI	RCATGY	2 cut(s)	734, 1266
BstSCI	CCNGG	3 cut(s)	116, 974, 1873
BstSFI	CTRYAG	2 cut(s)	981, 1026
BstSLI	GKGCMC	1 cut(s)	568
BstV1I	GCAGC	8 cut(s)	255, 412, 967, 983, 1012, 1204, 1849, 1852
BstV2I	GAAGAC	1 cut(s)	1682
BstX2I	RGATCY	3 cut(s)	516, 549, 1493
BstXI	CCANNNNNNTGG	1 cut(s)	943
BstYI	RGATCY	3 cut(s)	516, 549, 1493
BsuRI	GGCC	4 cut(s)	935, 947, 1117, 1655
BtgZI	GCGATG	1 cut(s)	666
BtsCI	GGATG	4 cut(s)	471, 789, 1018, 1159
BtsIMutI	CAGTG	5 cut(s)	296, 528, 555, 665, 1656
BveI	ACCTGC	1 cut(s)	1675
Cac8I	GCNNGC	4 cut(s)	756, 1092, 1096, 1363
CaiI	CAGNNNCTG	2 cut(s)	1118, 1816
CfoI	GCGC	1 cut(s)	1804
Cfr13I	GGNCC	2 cut(s)	593, 1115
Csp6I	GTAC	9 cut(s)	34, 238, 700, 846, 1347, 1485, 1640, 1790, 1944
CviAII	CATG	3 cut(s)	131, 731, 1263
CviQI	GTAC	9 cut(s)	34, 238, 700, 846, 1347, 1485, 1640, 1790, 1944
DdeI	CTNAG	7 cut(s)	333, 912, 1149, 1196, 1253, 1650, 1842
DpnI	GATC	7 cut(s)	288, 501, 518, 551, 747, 1394, 1495
DpnII	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
EaeI	YGGCCR	1 cut(s)	945
Eam1104I	CTCTTC	6 cut(s)	405, 503, 981, 1296, 1374, 1934
EarI	CTCTTC	6 cut(s)	405, 503, 981, 1296, 1374, 1934
Eco130I	CCWWGG	1 cut(s)	1388
Eco24I	GRGCYC	1 cut(s)	1096
Eco31I	GGTCTC	1 cut(s)	867
Eco47I	GGWCC	1 cut(s)	593
Eco47III	AGCGCT	1 cut(s)	1803
Eco57I	CTGAAG	6 cut(s)	164, 441, 565, 689, 1076, 1937
Eco88I	CYCGRG	1 cut(s)	877
EcoO109I	RGGNCCY	1 cut(s)	1115
EcoRI	GAATTC	1 cut(s)	840
EcoRII	CCWGG	1 cut(s)	974
EcoT14I	CCWWGG	1 cut(s)	1388
EcoT22I	ATGCAT	2 cut(s)	865, 1264
EcoT38I	GRGCYC	1 cut(s)	1096
ErhI	CCWWGG	1 cut(s)	1388
Esp3I	CGTCTC	1 cut(s)	991
FaeI	CATG	3 cut(s)	134, 734, 1266
FalI	AAGNNNNNCTT	2 cut(s)	1910, 1942
FatI	CATG	3 cut(s)	130, 730, 1262
FauI	CCCGC	2 cut(s)	1083, 1681
FblI	GTMKAC	1 cut(s)	678
Fnu4HI	GCNGC	9 cut(s)	244, 426, 972, 981, 1026, 1193, 1839, 1863, 1866
FokI	GGATG	4 cut(s)	458, 796, 1025, 1166
FriOI	GRGCYC	1 cut(s)	1096
Fsp4HI	GCNGC	9 cut(s)	244, 426, 972, 981, 1026, 1193, 1839, 1863, 1866
FspBI	CTAG	2 cut(s)	819, 1551
GlaI	GCGC	1 cut(s)	1803
GluI	GCNGC	9 cut(s)	244, 426, 972, 981, 1026, 1193, 1839, 1863, 1866
GsuI	CTGGAG	2 cut(s)	1256, 1520
HaeII	RGCGCY	1 cut(s)	1805
HaeIII	GGCC	4 cut(s)	935, 947, 1117, 1655
HapII	CCGG	2 cut(s)	117, 1874
HhaI	GCGC	1 cut(s)	1804
Hin1II	CATG	3 cut(s)	134, 734, 1266
Hin6I	GCGC	1 cut(s)	1802
HinP1I	GCGC	1 cut(s)	1802
HincII	GTYRAC	3 cut(s)	59, 628, 856
HindII	GTYRAC	3 cut(s)	59, 628, 856
HindIII	AAGCTT	3 cut(s)	146, 1557, 1924
HinfI	GANTC	8 cut(s)	103, 233, 310, 524, 761, 1547, 1565, 1694
HpaI	GTTAAC	1 cut(s)	628
HpaII	CCGG	2 cut(s)	117, 1874
HphI	GGTGA	1 cut(s)	1584
Hpy166II	GTNNAC	5 cut(s)	59, 110, 628, 679, 856
Hpy188III	TCNNGA	7 cut(s)	107, 359, 709, 749, 767, 1537, 1574
Hpy8I	GTNNAC	5 cut(s)	59, 110, 628, 679, 856
HpyCH4III	ACNGT	4 cut(s)	300, 1108, 1351, 1528
HpyF10VI	GCNNNNNNNGC	9 cut(s)	21, 908, 977, 980, 1022, 1034, 1051, 1087, 1852
HpyF3I	CTNAG	7 cut(s)	333, 912, 1149, 1196, 1253, 1650, 1842
Hsp92II	CATG	3 cut(s)	134, 734, 1266
HspAI	GCGC	1 cut(s)	1802
KpnI	GGTACC	3 cut(s)	703, 1350, 1643
KspAI	GTTAAC	1 cut(s)	628
Kzo9I	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
LmnI	GCTCC	3 cut(s)	337, 1080, 1852
Lsp1109I	GCAGC	8 cut(s)	255, 412, 967, 983, 1012, 1204, 1849, 1852
LweI	GCATC	2 cut(s)	1003, 1249
MaeI	CTAG	2 cut(s)	819, 1551
MaeIII	GTNAC	3 cut(s)	458, 767, 1120
MalI	GATC	7 cut(s)	288, 501, 518, 551, 747, 1394, 1495
MbiI	CCGCTC	2 cut(s)	1090, 1841
MboI	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
MflI	RGATCY	3 cut(s)	516, 549, 1493
MhlI	GDGCHC	2 cut(s)	568, 1096
MlsI	TGGCCA	1 cut(s)	947
MluCI	AATT	8 cut(s)	495, 682, 840, 953, 1404, 1433, 1506, 1904
MluNI	TGGCCA	1 cut(s)	947
MlyI	GAGTC	4 cut(s)	319, 518, 770, 1703
MmeI	TCCRAC	1 cut(s)	695
Mox20I	TGGCCA	1 cut(s)	947
Mph1103I	ATGCAT	2 cut(s)	865, 1264
MroXI	GAANNNNTTC	1 cut(s)	1108
MscI	TGGCCA	1 cut(s)	947
MseI	TTAA	6 cut(s)	198, 317, 465, 494, 627, 1951
Msp20I	TGGCCA	1 cut(s)	947
MspA1I	CMGCKG	1 cut(s)	64
MspI	CCGG	2 cut(s)	117, 1874
MspR9I	CCNGG	3 cut(s)	118, 976, 1875
Mva1269I	GAATGC	2 cut(s)	121, 802
MvaI	CCWGG	1 cut(s)	976
MwoI	GCNNNNNNNGC	9 cut(s)	21, 908, 977, 980, 1022, 1034, 1051, 1087, 1852
NciI	CCSGG	2 cut(s)	118, 1875
NdeII	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
NlaIII	CATG	3 cut(s)	134, 734, 1266
NlaIV	GGNNCC	6 cut(s)	701, 1186, 1330, 1348, 1641, 1765
NmuCI	GTSAC	2 cut(s)	458, 767
NsiI	ATGCAT	2 cut(s)	865, 1264
NspI	RCATGY	2 cut(s)	734, 1266
NspV	TTCGAA	2 cut(s)	1102, 1127
PaqCI	CACCTGC	1 cut(s)	1675
PctI	GAATGC	2 cut(s)	121, 802
PdmI	GAANNNNTTC	1 cut(s)	1108
PfeI	GAWTC	4 cut(s)	103, 233, 1547, 1565
PflMI	CCANNNNNTGG	1 cut(s)	46
PkrI	GCNGC	9 cut(s)	245, 427, 973, 982, 1027, 1194, 1840, 1864, 1867
PleI	GAGTC	4 cut(s)	318, 518, 769, 1702
PpsI	GAGTC	4 cut(s)	318, 518, 769, 1702
Psp6I	CCWGG	1 cut(s)	974
PspGI	CCWGG	1 cut(s)	974
PspN4I	GGNNCC	6 cut(s)	701, 1186, 1330, 1348, 1641, 1765
PspPI	GGNCC	2 cut(s)	593, 1115
PstI	CTGCAG	2 cut(s)	985, 1030
PstNI	CAGNNNCTG	2 cut(s)	1118, 1816
PsuI	RGATCY	3 cut(s)	516, 549, 1493
RsaI	GTAC	9 cut(s)	35, 239, 701, 847, 1348, 1486, 1641, 1791, 1945
RsaNI	GTAC	9 cut(s)	34, 238, 700, 846, 1347, 1485, 1640, 1790, 1944
SaqAI	TTAA	6 cut(s)	198, 317, 465, 494, 627, 1951
SatI	GCNGC	9 cut(s)	244, 426, 972, 981, 1026, 1193, 1839, 1863, 1866
Sau3AI	GATC	7 cut(s)	286, 499, 516, 549, 745, 1392, 1493
Sau96I	GGNCC	2 cut(s)	593, 1115
SchI	GAGTC	4 cut(s)	319, 518, 770, 1703
ScrFI	CCNGG	3 cut(s)	118, 976, 1875
SduI	GDGCHC	2 cut(s)	568, 1096
SfaNI	GCATC	2 cut(s)	1003, 1249
SfcI	CTRYAG	2 cut(s)	981, 1026
SfuI	TTCGAA	2 cut(s)	1102, 1127
SinI	GGWCC	1 cut(s)	593
SmlI	CTYRAG	1 cut(s)	749
SmoI	CTYRAG	1 cut(s)	749
Sse9I	AATT	8 cut(s)	495, 682, 840, 953, 1404, 1433, 1506, 1904
SsiI	CCGC	8 cut(s)	62, 616, 758, 1081, 1090, 1688, 1839, 1947
SspMI	CTAG	2 cut(s)	819, 1551
StyD4I	CCNGG	3 cut(s)	116, 974, 1873
StyI	CCWWGG	1 cut(s)	1388
TaaI	ACNGT	4 cut(s)	300, 1108, 1351, 1528
TaqI	TCGA	2 cut(s)	1102, 1127
TasI	AATT	8 cut(s)	495, 682, 840, 953, 1404, 1433, 1506, 1904
TatI	WGTACW	1 cut(s)	1789
TauI	GCSGC	1 cut(s)	1841
TfiI	GAWTC	4 cut(s)	103, 233, 1547, 1565
Tru1I	TTAA	6 cut(s)	198, 317, 465, 494, 627, 1951
Tru9I	TTAA	6 cut(s)	198, 317, 465, 494, 627, 1951
TscAI	CASTG	5 cut(s)	303, 535, 562, 672, 1663
TseFI	GTSAC	2 cut(s)	458, 767
TseI	GCWGC	8 cut(s)	243, 425, 971, 980, 1025, 1192, 1862, 1865
Tsp45I	GTSAC	2 cut(s)	458, 767
TspDTI	ATGAA	1 cut(s)	1698
TspGWI	ACGGA	3 cut(s)	1015, 1321, 1486
TspRI	CASTG	5 cut(s)	303, 535, 562, 672, 1663
Van91I	CCANNNNNTGG	1 cut(s)	46
VpaK11BI	GGWCC	1 cut(s)	593
XapI	RAATTY	4 cut(s)	840, 1433, 1506, 1904
XceI	RCATGY	2 cut(s)	734, 1266
XmiI	GTMKAC	1 cut(s)	678
XmnI	GAANNNNTTC	1 cut(s)	1108
XspI	CTAG	2 cut(s)	819, 1551
Zsp2I	ATGCAT	2 cut(s)	865, 1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.