AT3G13682

Lysine-specific histone demethylase 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010932
Physical Location & Seq
Reverse (-)
4478873 .. 4481767
2895 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G13682.1

Sequence Viewer

Length: 2241 bp
ATGAATTCTCCGGCGTCGGATGAAACGGCTCCGAGGAGGAACAGGAGAAAAGTAAGTAGGAAGAACTACGATGAGAATGCGATGGATGAATTGATTGAGAAGCAATTAGGTGGAAAGGCGAAGAAAAAGTACAGGACGAAGCAAGATTTGGAGAAAGAGACTGAGACCGAGGCTCTGATAGCTCTGTCCGTAGGTTTCCCAATCGACGAATTGCTTGAGGAAGAGATTCGAGCTGGAGTTGTAAGAGAATTAGGCGGGAAAGAGCAGAACGATTACATTGTTGTTCGGAATCATATAGTAGCTAGGTGGAGGGGTAATGTTGGAATTTGGCTACTCAAAGATCAGATTAGAGAAACTGTTAGTAGTGACTTTGAGCATTTGATTTCAGCTGCTTATGATTTTCTCTTGTTTAATGGATACATCAATTTTGGGGTTTCTCCATTGTTTGCTCCTTATATTCCTGAAGAGGGTACTGAGGGATCAGTCATTGTTGTTGGTGCTGGACTTGCTGGTTTGGCTGCTGCTAGACAGCTTTTGTCATTTGGGTTCAAGGTTCTTGTTTTAGAAGGTAGGAGTCGTCCTGGTGGACGAGTGTACACTCAGAAGATGGGAGGTAAGGATAGATTTGCAGCTGTTGAACTCGGTGGTAGTGTAATCACGGGTTTACATGCGAACCCACTTGGAGTTCTTGCGAGACAGCTTTCTATTCCTCTTCACAAGGTTAGAGACAACTGTCCTTTGTATAATTCAGAGGGAGTACTTGTCGATAAAGTAGCTGACTCCAATGTTGAGTTTGGTTTCAACAAACTGCTTGACAAGGTCACAGAAGTAAGGGAGATGATGGAAGGGGCAGCTAAGAAGATTTCTTTGGGAGAAGTCTTGGAGACTCTTAGGGTACTGTATGGTGTAGCTAAAGATTCAGAGGAAAGAAAACTTTTTGACTGGCACCTTGCTAACTTGGAATATGCTAACGCTGGGTGTCTTTCGAATCTTTCAGCTGCTTACTGGGATCAGGATGATCCTTACGAAATGGGTGGGGATCATTGTTTTCTTGCTGGTGGAAACTGGAGACTGATAAATGCATTAGCTGAAGGGCTACCCATAATCTATGGGAAAAGCGTTGACACTATCAAGTATGGAGACGGAGGAGTTGAAGTCATTTCTGGTAGCCAGATATTTCAAGCTGACATGATTCTTTGCACTGTGCCGCTTGGGGTCTTGAAGAAGAGATCTATCAAGTTTGAGCCGGAGTTACCTAGAAGAAAACAAGCAGCAATTGACAGGTTGGGGTTTGGCCTTCTGAACAAAGTTGCCATGCTTTTCCCATCTGTCTTTTGGGGTGATGAGTTAGACACGTTTGGATGCCTCAACGAGAGTAGCATCAACCGAGGAGAGTTTTTTCTATTCTATGCCTACCATACAGTCTCTGGTGGCCCTGCCTTGGTTGCCTTAGTTGCTGGAGAAGCTGCTCAACGATTTGAGTGCACAGAACCATCTGTTTTACTTCACCGTGTTTTAAAAAAACTCAGAGGCATATATGGTCCTAAAGGTGTTGTTGTGCCTGACCCAATACAGACGGTTTGCACTAGATGGGGAAGTGATCCTTTGTCATATGGGTCATATTCTCATGTAAGGGTTGGTTCATCTGGTGTGGACTATGACATTCTTGCTGAAAGTGTTAGTAACCGTCTATTCTTCGCTGGTGAGGCCACGACAAGGCAACATCCAGCCACAATGCACGGTGCCTACTTAAGTGGTTTAAGAGAAGCCTCAAAGATTCTACATGTTGCGAATTATCTTCGCAGTAATCTAAAGAAACCTGTTCAAAGATATAGTGGAGTTAACATAAACGTTCTTGAAGATATGTTCAAAAGACCCGACATAGCAATAGGGAAGTTGTCATTTGTCTTCAACCCATTAACCGACGATCCGAAATCGTTTGGATTAGTCAGAGTTTGTTTTGACAACTTTGAAGAAGATCCAACCAATCGTCTTCAGCTTTACACTATTCTTTCCCGGGAGCAAGCTAACAAGATCAAAGAATTGGACGAAAATAGTAATGAGAGCAAACTATCGTGTCTGATGAATACTCTTGGATTAAAGCTAATGGGTGCCAACTCAGTACTAGACACAGGTGGTGCGTTGATCAGTGTCATAGCTAACGCACGCAGAGGCAGAAGCAGGTCCCACGTGGTTGCAGGGCAATGTAACCTCCCCTTAAACCCCCTGCATTTTAATTGA

Protein Analysis

746

Amino Acids

82.35

Weight (kDa)

6.73

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIRM PF04433 73 - 143 2.5e-11 SWIRM domain
NAD_binding_8 PF13450 164 - 225 5.9e-12 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 169 - 594 4.9e-83 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010932)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13682
fragaria_vesca FvH4_3g20840 FvH4_3g20840 FvH4_3g20840 FvH4_3g20840 FvH4_3g20840
malus_domestica MD03G1220300.v1.1
prunus_persica Prupe.4G188600_v2.0.a1
pyrus_communis pycom03g16960
rosa_chinensis RchiOBHm_Chr5g0035141
rosa_laevigata RLG00000033600 RLG00000033601
rosa_multiflora Rmu_sc0000879.1_g000007
rosa_roxburghii Rroxscaffold_1G00045270
rosa_rugosa Rorug05G0150300
rosa_samantha Rh5AG243100 Rh5BG242700 Rh5CG274300 Rh5DG251500
rosa_wichuraiana Rw5G022210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2172
AccB1I GGYRCC 3 cut(s) 945, 1742, 2111
AciI CCGC 2 cut(s) 255, 1208
AclI AACGTT 1 cut(s) 1851
AclWI GGATC 7 cut(s) 487, 1013, 1017, 1047, 1595, 1922, 1973
AcsI RAATTY 2 cut(s) 4, 324
AcuI CTGAAG 3 cut(s) 483, 1110, 1979
AcvI CACGTG 1 cut(s) 2191
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 6 cut(s) 131, 472, 596, 759, 897, 2124
AfiI CCNNNNNNNGG 3 cut(s) 467, 1441, 1716
AflII CTTAAG 1 cut(s) 1750
AflIII ACRYGT 2 cut(s) 1353, 1783
AjnI CCWGG 1 cut(s) 580
AjuI GAANNNNNNNTTGG 4 cut(s) 131, 163, 851, 883
Alw21I GWGCWC 1 cut(s) 1487
Alw26I GTCTC 8 cut(s) 152, 158, 688, 720, 878, 1063, 1134, 1429
Alw44I GTGCAC 1 cut(s) 1483
AlwI GGATC 7 cut(s) 487, 1013, 1017, 1047, 1595, 1922, 1973
AlwNI CAGNNNCTG 1 cut(s) 1427
Ama87I CYCGRG 1 cut(s) 2016
AoxI GGCC 3 cut(s) 1294, 1432, 1707
ApaLI GTGCAC 1 cut(s) 1483
ApeKI GCWGC 8 cut(s) 389, 518, 521, 629, 851, 998, 1271, 1466
ApoI RAATTY 2 cut(s) 4, 324
Asp700I GAANNNNTTC 1 cut(s) 225
AspS9I GGNCC 3 cut(s) 1433, 1541, 2184
AsuC2I CCSGG 2 cut(s) 2017, 2018
AsuHPI GGTGA 3 cut(s) 1352, 1499, 1715
AsuII TTCGAA 1 cut(s) 986
AvaI CYCGRG 1 cut(s) 2016
AvaII GGWCC 2 cut(s) 1541, 2184
BaeGI GKGCMC 1 cut(s) 1487
BanI GGYRCC 3 cut(s) 945, 1742, 2111
BarI GAAGNNNNNNTAC 2 cut(s) 113, 145
BbrPI CACGTG 1 cut(s) 2191
BbsI GAAGAC 2 cut(s) 1900, 1985
Bbv12I GWGCWC 1 cut(s) 1487
BbvI GCAGC 8 cut(s) 376, 505, 508, 641, 863, 985, 1283, 1453
BccI CCATC 6 cut(s) 76, 601, 835, 1333, 1501, 1584
BceAI ACGGC 1 cut(s) 42
BcgI CGANNNNNNTGC 4 cut(s) 59, 93, 1464, 1498
BciT130I CCWGG 1 cut(s) 582
BciVI GTATCC 1 cut(s) 410
BclI TGATCA 1 cut(s) 2145
BcnI CCSGG 2 cut(s) 2017, 2018
BcoDI GTCTC 8 cut(s) 152, 158, 688, 720, 878, 1063, 1134, 1429
BfaI CTAG 5 cut(s) 303, 525, 1257, 1587, 2126
BfrI CTTAAG 1 cut(s) 1750
BfuAI ACCTGC 1 cut(s) 2172
BfuI GTATCC 1 cut(s) 410
BglII AGATCT 1 cut(s) 1229
BisI GCNGC 9 cut(s) 390, 519, 522, 630, 852, 999, 1208, 1272, 1467
BlsI GCNGC 9 cut(s) 391, 520, 523, 631, 853, 1000, 1209, 1273, 1468
BmcAI AGTACT 2 cut(s) 759, 2124
Bme1390I CCNGG 3 cut(s) 582, 2017, 2018
Bme18I GGWCC 2 cut(s) 1541, 2184
BmeT110I CYCGRG 1 cut(s) 2016
BmgT120I GGNCC 3 cut(s) 1433, 1541, 2184
BmiI GGNNCC 5 cut(s) 30, 947, 1744, 2113, 2186
BmrFI CCNGG 3 cut(s) 582, 2017, 2018
BmrI ACTGGG 1 cut(s) 1015
BmsI GCATC 2 cut(s) 1352, 1389
BmuI ACTGGG 1 cut(s) 1015
BoxI GACNNNNGTC 1 cut(s) 732
BpiI GAAGAC 2 cut(s) 1900, 1985
BpmI CTGGAG 3 cut(s) 255, 1087, 1479
Bpu14I TTCGAA 1 cut(s) 986
BpuEI CTTGAG 1 cut(s) 236
BpuMI CCSGG 2 cut(s) 2017, 2018
BsaAI YACGTR 1 cut(s) 2191
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 5 cut(s) 32, 168, 1387, 1440, 2016
BsaXI ACNNNNNCTCC 4 cut(s) 747, 777, 1140, 1170
Bsc4I CCNNNNNNNGG 3 cut(s) 467, 1441, 1716
Bse1I ACTGG 3 cut(s) 947, 1010, 1070
Bse3DI GCAATG 1 cut(s) 2210
BseBI CCWGG 1 cut(s) 582
BseDI CCNNGG 5 cut(s) 32, 168, 1387, 1440, 2016
BseGI GGATG 5 cut(s) 25, 91, 1021, 1367, 1723
BseLI CCNNNNNNNGG 3 cut(s) 467, 1441, 1716
BseMI GCAATG 1 cut(s) 2210
BseMII CTCAG 5 cut(s) 153, 465, 614, 1540, 2133
BseNI ACTGG 3 cut(s) 947, 1010, 1070
BseRI GAGGAG 3 cut(s) 49, 1161, 1404
BseSI GKGCMC 1 cut(s) 1487
BseXI GCAGC 8 cut(s) 376, 505, 508, 641, 863, 985, 1283, 1453
BseYI CCCAGC 1 cut(s) 974
BshFI GGCC 3 cut(s) 1296, 1434, 1709
BshNI GGYRCC 3 cut(s) 945, 1742, 2111
BsiHKAI GWGCWC 1 cut(s) 1487
BsiHKCI CYCGRG 1 cut(s) 2016
BsiSI CCGG 3 cut(s) 11, 1247, 2017
BslFI GGGAC 1 cut(s) 2170
BslI CCNNNNNNNGG 3 cut(s) 467, 1441, 1716
BsmAI GTCTC 8 cut(s) 152, 158, 688, 720, 878, 1063, 1134, 1429
BsmBI CGTCTC 1 cut(s) 1134
BsmFI GGGAC 1 cut(s) 2170
BsmI GAATGC 1 cut(s) 82
BsnI GGCC 3 cut(s) 1296, 1434, 1709
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 2016
Bsp119I TTCGAA 1 cut(s) 986
Bsp1286I GDGCHC 1 cut(s) 1487
Bsp1407I TGTACA 1 cut(s) 594
BspACI CCGC 2 cut(s) 255, 1208
BspANI GGCC 3 cut(s) 1296, 1434, 1709
BspCNI CTCAG 5 cut(s) 154, 466, 613, 1539, 2132
BspLI GGNNCC 5 cut(s) 30, 947, 1744, 2113, 2186
BspMI ACCTGC 1 cut(s) 2172
BspPI GGATC 7 cut(s) 487, 1013, 1017, 1047, 1595, 1922, 1973
BspT104I TTCGAA 1 cut(s) 986
BspT107I GGYRCC 3 cut(s) 945, 1742, 2111
BspTI CTTAAG 1 cut(s) 1750
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 2210
BsrGI TGTACA 1 cut(s) 594
BsrI ACTGG 3 cut(s) 947, 1010, 1070
BssECI CCNNGG 5 cut(s) 32, 168, 1387, 1440, 2016
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 1440
Bst2UI CCWGG 1 cut(s) 582
Bst4CI ACNGT 9 cut(s) 358, 734, 900, 1204, 1423, 1511, 1579, 1688, 1742
Bst6I CTCTTC 4 cut(s) 216, 459, 717, 1220
BstACI GRCGYC 1 cut(s) 14
BstAFI CTTAAG 1 cut(s) 1750
BstAUI TGTACA 1 cut(s) 594
BstBAI YACGTR 1 cut(s) 2191
BstBI TTCGAA 1 cut(s) 986
BstC8I GCNNGC 2 cut(s) 2025, 2167
BstDEI CTNAG 8 cut(s) 162, 474, 600, 855, 890, 1450, 1526, 2119
BstF5I GGATG 5 cut(s) 25, 91, 1021, 1367, 1723
BstMAI GTCTC 8 cut(s) 152, 158, 688, 720, 878, 1063, 1134, 1429
BstMWI GCNNNNNNNGC 7 cut(s) 179, 506, 515, 1445, 1454, 1463, 1706
BstNI CCWGG 1 cut(s) 582
BstNSI RCATGY 2 cut(s) 671, 1787
BstPAI GACNNNNGTC 1 cut(s) 732
BstSCI CCNGG 3 cut(s) 580, 2015, 2016
BstSLI GKGCMC 1 cut(s) 1487
BstV1I GCAGC 8 cut(s) 376, 505, 508, 641, 863, 985, 1283, 1453
BstV2I GAAGAC 2 cut(s) 1900, 1985
BstX2I RGATCY 2 cut(s) 1229, 1978
BstYI RGATCY 2 cut(s) 1229, 1978
BsuI GTATCC 1 cut(s) 410
BsuRI GGCC 3 cut(s) 1296, 1434, 1709
BtgZI GCGATG 1 cut(s) 95
BtsCI GGATG 5 cut(s) 25, 91, 1021, 1367, 1723
BtsIMutI CAGTG 2 cut(s) 1200, 2155
BveI ACCTGC 1 cut(s) 2172
Cac8I GCNNGC 2 cut(s) 2025, 2167
CaiI CAGNNNCTG 1 cut(s) 1427
Cfr13I GGNCC 3 cut(s) 1433, 1541, 2184
Cfr9I CCCGGG 1 cut(s) 2016
CseI GACGC 1 cut(s) 3
Csp6I GTAC 6 cut(s) 130, 471, 595, 758, 896, 2123
CviAII CATG 5 cut(s) 668, 1189, 1315, 1628, 1784
CviQI GTAC 6 cut(s) 130, 471, 595, 758, 896, 2123
DdeI CTNAG 8 cut(s) 162, 474, 600, 855, 890, 1450, 1526, 2119
DraI TTTAAA 1 cut(s) 1518
Eam1104I CTCTTC 4 cut(s) 216, 459, 717, 1220
EarI CTCTTC 4 cut(s) 216, 459, 717, 1220
Eco130I CCWWGG 1 cut(s) 1440
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 2 cut(s) 1541, 2184
Eco57I CTGAAG 3 cut(s) 483, 1110, 1979
Eco72I CACGTG 1 cut(s) 2191
Eco88I CYCGRG 1 cut(s) 2016
EcoO109I RGGNCCY 1 cut(s) 2184
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 580
EcoT14I CCWWGG 1 cut(s) 1440
EcoT22I ATGCAT 1 cut(s) 1084
ErhI CCWWGG 1 cut(s) 1440
Esp3I CGTCTC 1 cut(s) 1134
FaeI CATG 5 cut(s) 671, 1192, 1318, 1631, 1787
FalI AAGNNNNNCTT 2 cut(s) 1588, 1620
FaqI GGGAC 1 cut(s) 2170
FatI CATG 5 cut(s) 667, 1188, 1314, 1627, 1783
FauI CCCGC 1 cut(s) 248
FauNDI CATATG 1 cut(s) 1612
FbaI TGATCA 1 cut(s) 2145
Fnu4HI GCNGC 9 cut(s) 390, 519, 522, 630, 852, 999, 1208, 1272, 1467
FokI GGATG 5 cut(s) 32, 98, 1028, 1374, 1710
Fsp4HI GCNGC 9 cut(s) 390, 519, 522, 630, 852, 999, 1208, 1272, 1467
FspBI CTAG 5 cut(s) 303, 525, 1257, 1587, 2126
GluI GCNGC 9 cut(s) 390, 519, 522, 630, 852, 999, 1208, 1272, 1467
GsaI CCCAGC 1 cut(s) 978
GsuI CTGGAG 3 cut(s) 255, 1087, 1479
HaeIII GGCC 3 cut(s) 1296, 1434, 1709
HapII CCGG 3 cut(s) 11, 1247, 2017
HgaI GACGC 1 cut(s) 3
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 5 cut(s) 671, 1192, 1318, 1631, 1787
HincII GTYRAC 2 cut(s) 1123, 1843
HindII GTYRAC 2 cut(s) 1123, 1843
HinfI GANTC 9 cut(s) 226, 289, 574, 779, 886, 917, 988, 1192, 1777
HpaI GTTAAC 1 cut(s) 1843
HpaII CCGG 3 cut(s) 11, 1247, 2017
HphI GGTGA 3 cut(s) 1352, 1499, 1715
Hpy166II GTNNAC 8 cut(s) 587, 595, 597, 665, 1123, 1485, 1654, 1843
Hpy188III TCNNGA 4 cut(s) 461, 1013, 1219, 1856
Hpy8I GTNNAC 8 cut(s) 587, 595, 597, 665, 1123, 1485, 1654, 1843
Hpy99I CGWCG 3 cut(s) 19, 209, 1928
HpyAV CCTTC 4 cut(s) 560, 839, 1085, 1307
HpyCH4III ACNGT 9 cut(s) 358, 734, 900, 1204, 1423, 1511, 1579, 1688, 1742
HpyCH4IV ACGT 3 cut(s) 1355, 1851, 2190
HpyCH4V TGCA 8 cut(s) 629, 1082, 1200, 1485, 1584, 1738, 2198, 2230
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 506, 515, 1445, 1454, 1463, 1706
HpyF3I CTNAG 8 cut(s) 162, 474, 600, 855, 890, 1450, 1526, 2119
HpySE526I ACGT 3 cut(s) 1355, 1851, 2190
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 5 cut(s) 671, 1192, 1318, 1631, 1787
Ksp22I TGATCA 1 cut(s) 2145
KspAI GTTAAC 1 cut(s) 1843
LmnI GCTCC 3 cut(s) 34, 454, 2020
Lsp1109I GCAGC 8 cut(s) 376, 505, 508, 641, 863, 985, 1283, 1453
LweI GCATC 2 cut(s) 1352, 1389
MaeI CTAG 5 cut(s) 303, 525, 1257, 1587, 2126
MaeII ACGT 3 cut(s) 1355, 1851, 2190
MaeIII GTNAC 5 cut(s) 365, 820, 1251, 1682, 2207
MfeI CAATTG 1 cut(s) 1275
MflI RGATCY 2 cut(s) 1229, 1978
MhlI GDGCHC 1 cut(s) 1487
MlyI GAGTC 3 cut(s) 583, 773, 880
MmeI TCCRAC 2 cut(s) 301, 2006
Mph1103I ATGCAT 1 cut(s) 1084
MroXI GAANNNNTTC 1 cut(s) 225
MseI TTAA 9 cut(s) 411, 1517, 1751, 1760, 1842, 1919, 2099, 2219, 2235
MspA1I CMGCKG 3 cut(s) 389, 632, 998
MspCI CTTAAG 1 cut(s) 1750
MspI CCGG 3 cut(s) 11, 1247, 2017
MspR9I CCNGG 3 cut(s) 582, 2017, 2018
MunI CAATTG 1 cut(s) 1275
Mva1269I GAATGC 1 cut(s) 82
MvaI CCWGG 1 cut(s) 582
MwoI GCNNNNNNNGC 7 cut(s) 179, 506, 515, 1445, 1454, 1463, 1706
NciI CCSGG 2 cut(s) 2017, 2018
NdeI CATATG 1 cut(s) 1612
NlaIII CATG 5 cut(s) 671, 1192, 1318, 1631, 1787
NlaIV GGNNCC 5 cut(s) 30, 947, 1744, 2113, 2186
NmuCI GTSAC 2 cut(s) 365, 820
NsiI ATGCAT 1 cut(s) 1084
NspI RCATGY 2 cut(s) 671, 1787
NspV TTCGAA 1 cut(s) 986
PciI ACATGT 1 cut(s) 1783
PctI GAATGC 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 6 cut(s) 226, 289, 917, 988, 1192, 1777
PflFI GACNNNGTC 1 cut(s) 818
PkrI GCNGC 9 cut(s) 391, 520, 523, 631, 853, 1000, 1209, 1273, 1468
PleI GAGTC 3 cut(s) 582, 773, 880
PmaCI CACGTG 1 cut(s) 2191
PmlI CACGTG 1 cut(s) 2191
PpsI GAGTC 3 cut(s) 582, 773, 880
Ppu21I YACGTR 1 cut(s) 2191
PpuMI RGGWCCY 1 cut(s) 2184
PscI ACATGT 1 cut(s) 1783
PshAI GACNNNNGTC 1 cut(s) 732
Psp1406I AACGTT 1 cut(s) 1851
Psp5II RGGWCCY 1 cut(s) 2184
Psp6I CCWGG 1 cut(s) 580
PspCI CACGTG 1 cut(s) 2191
PspFI CCCAGC 1 cut(s) 974
PspGI CCWGG 1 cut(s) 580
PspN4I GGNNCC 5 cut(s) 30, 947, 1744, 2113, 2186
PspPI GGNCC 3 cut(s) 1433, 1541, 2184
PspPPI RGGWCCY 1 cut(s) 2184
PstNI CAGNNNCTG 1 cut(s) 1427
PsuI RGATCY 2 cut(s) 1229, 1978
PsyI GACNNNGTC 1 cut(s) 818
PvuII CAGCTG 3 cut(s) 389, 632, 998
RsaI GTAC 6 cut(s) 131, 472, 596, 759, 897, 2124
RsaNI GTAC 6 cut(s) 130, 471, 595, 758, 896, 2123
SaqAI TTAA 9 cut(s) 411, 1517, 1751, 1760, 1842, 1919, 2099, 2219, 2235
SatI GCNGC 9 cut(s) 390, 519, 522, 630, 852, 999, 1208, 1272, 1467
Sau96I GGNCC 3 cut(s) 1433, 1541, 2184
ScaI AGTACT 2 cut(s) 759, 2124
SchI GAGTC 3 cut(s) 583, 773, 880
ScrFI CCNGG 3 cut(s) 582, 2017, 2018
SduI GDGCHC 1 cut(s) 1487
SfaNI GCATC 2 cut(s) 1352, 1389
SfuI TTCGAA 1 cut(s) 986
SinI GGWCC 2 cut(s) 1541, 2184
SmaI CCCGGG 1 cut(s) 2018
SmlI CTYRAG 2 cut(s) 215, 1750
SmoI CTYRAG 2 cut(s) 215, 1750
SsiI CCGC 2 cut(s) 255, 1208
SspMI CTAG 5 cut(s) 303, 525, 1257, 1587, 2126
StyD4I CCNGG 3 cut(s) 580, 2015, 2016
StyI CCWWGG 1 cut(s) 1440
TaaI ACNGT 9 cut(s) 358, 734, 900, 1204, 1423, 1511, 1579, 1688, 1742
TaiI ACGT 3 cut(s) 1358, 1854, 2193
TaqI TCGA 4 cut(s) 204, 229, 765, 986
TaqII GACCGA 1 cut(s) 182
TatI WGTACW 4 cut(s) 129, 594, 757, 2122
TauI GCSGC 1 cut(s) 1210
TfiI GAWTC 6 cut(s) 226, 289, 917, 988, 1192, 1777
Tru1I TTAA 9 cut(s) 411, 1517, 1751, 1760, 1842, 1919, 2099, 2219, 2235
Tru9I TTAA 9 cut(s) 411, 1517, 1751, 1760, 1842, 1919, 2099, 2219, 2235
TscAI CASTG 2 cut(s) 1207, 2155
TseFI GTSAC 2 cut(s) 365, 820
TseI GCWGC 8 cut(s) 389, 518, 521, 629, 851, 998, 1271, 1466
Tsp45I GTSAC 2 cut(s) 365, 820
TspDTI ATGAA 5 cut(s) 17, 36, 102, 1632, 2099
TspGWI ACGGA 2 cut(s) 178, 1158
TspMI CCCGGG 1 cut(s) 2016
TspRI CASTG 2 cut(s) 1207, 2155
Tth111I GACNNNGTC 1 cut(s) 818
Vha464I CTTAAG 1 cut(s) 1750
VneI GTGCAC 1 cut(s) 1483
VpaK11BI GGWCC 2 cut(s) 1541, 2184
XapI RAATTY 2 cut(s) 4, 324
XceI RCATGY 2 cut(s) 671, 1787
XcmI CCANNNNNNNNNTGG 2 cut(s) 1332, 1424
XmaI CCCGGG 1 cut(s) 2016
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 5 cut(s) 303, 525, 1257, 1587, 2126
ZrmI AGTACT 2 cut(s) 759, 2124
Zsp2I ATGCAT 1 cut(s) 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.