Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000879.1

Orthogroup ID

OG0010932

Physical Location & Seq

Genomic Coordinates Reverse (-)

20919 .. 23281

Gene Structure 2363 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000879.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

atggaggcgccgggttcagatggttctgcaataaagcggtctctgaggaagaaggtcggtttgcgaagctatgatgagaatctaatggatgatctcatagagaagcatttgggtgggacttttaagaagaagagtaggacaaaggaggatttggagaaagagactgagaccgaggcgatgatagcattctccctcgggttccctatcgatgcgcttcttgaggaggaaattaatgctggggtggtcaaagagttaggcgggaaggagcagaatgattatattgttgtgaggaatcatattttagcaagatggaggagtaatgtccgagtgtggctcacaaaagcacagattagagaaaccgtgagtggtgagtatggggatttgatatctgctgcttatgattatcttttttataatggatacattaattttggggttgcaccatcatatgtggcatatatgccagaggaggcaactgaagggtctgttgttattgtcggagcaggacttgctggactagcagccgcaaggcatcttatgtcattgggtttcaaagtggttgttttagaaggtaggaatcgacctggtggaagagtttacacccaaaagatggggcacaatggcaacttttctgctgtggatctgggtggcagtgtcattactggcatccatgctaaccctcttggagtgttggctaggcaactttctattcctcttcataaggtcagggataactgccccttgtacaagcctgatggtatgcctgttgataaggaaatcgactctaagattgaagtcatctttaataagctgcttgacaaagtcatggaactcaggcaaactatgggtgggtttgcaaatgatatttctctgggttcagttttggagacacttaggcagttgtatgctgttgctagaagtgctgaggagaggcaacttcttgattggcatctcgcaaatttggaatatgcaaatgccggatgtctatcaaatctttcggctgcctattgggatcaggatgatccttatgaaatgggtggggaccactgctttctcgctggaggtaattggagattgataaaagcattatgtgaaggagttcctattttctatggaaagactgtgaataccattcgttatgcagatggaggggttgaagtgatcgcaggcgaccaagtgtttcgaggggatatggtcctgtgcactgttcctcttggagttctgaaaaaaggggctattaaatttgaacccgagttgccccaagaaaaacttgcagcgattcaaaggttggggtttgggctgctgaacaaagtagctatggtttttcctcatgttttctggggagaagatctggatacttttggatgtctcaatgaacacagccagaaacgtggagaattctttctgttctacagttaccatactgtttctggaggtccagttctcattgcactggtggctggagaagctgcacaaacatttgaatgcacagagccatccagcttgcttcatcgagttttaagtgtgctcagaggtatctacagtcgtaagggcattgtcgtgcctgatccaatacaaaccatatgtacaagatggggcagtgatcccctttcctatggttcatactctcatgtcagagtacagtcatccggcagtgactatgatttacttgcagaaaatgtgggaaaccggctgttctttgcaggtgaggccacaaataggcaacatccagctaccatgcatggggcctttttgagtggcctaagagaggcatcgtgcatgtatcgtgccacaaggagtagccaaaacaatgtcaagaaagtctcacaaaagaatgttggaccaagcaatgatatgctggtagatctattcaagcatccagatctagcatttgggaagttttcatttgtatttgatcctacaacagaagatccaaaatctgtagggcttatgagagttagtattgggagcgatgaagacagttttaatcagcagttcgtacacagcttccagcattccttaaacctaccattgcagctttatgctgttgtatctcgtgagcaagcatgtgggttagagatggtgacaggaggagaagaaagtaggttatcatacttggtaaaagatcttggtttgcaactgatgggacctagtgccctaggagctgcaggtaactccttggcaattagtattttcaatgcacgaagaggcaggggaaagaatcgtatgtttgctgggcggcaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034968 GO:0036211 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

748

Amino Acids

82.25

Weight (kDa)

6.34

Isoelectric Point (pI)

42.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13682
fragaria_vesca	FvH4_3g20840 FvH4_3g20840 FvH4_3g20840 FvH4_3g20840 FvH4_3g20840
malus_domestica	MD03G1220300.v1.1
prunus_persica	Prupe.4G188600_v2.0.a1
pyrus_communis	pycom03g16960
rosa_chinensis	RchiOBHm_Chr5g0035141
rosa_laevigata	RLG00000033600 RLG00000033601
rosa_multiflora	Rmu_sc0000879.1_g000007
rosa_roxburghii	Rroxscaffold_1G00045270
rosa_rugosa	Rorug05G0150300
rosa_samantha	Rh5AG243100 Rh5BG242700 Rh5CG274300 Rh5DG251500
rosa_wichuraiana	Rw5G022210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	414
AarI	CACCTGC	1 cut(s)	1694
Acc36I	ACCTGC	2 cut(s)	1694, 2159
AccB1I	GGYRCC	1 cut(s)	7
AccB7I	CCANNNNNTGG	1 cut(s)	610
AciI	CCGC	4 cut(s)	37, 258, 525, 2239
AclWI	GGATC	7 cut(s)	648, 1016, 1020, 1562, 1598, 1910, 1925
AcsI	RAATTY	3 cut(s)	958, 1241, 1397
AcuI	CTGAAG	1 cut(s)	498
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	4 cut(s)	746, 1588, 1641, 2001
AfiI	CCNNNNNNNGG	4 cut(s)	610, 1719, 1743, 1768
AgsI	TTSAA	8 cut(s)	553, 794, 1157, 1247, 1283, 1484, 1873, 2197
AjnI	CCWGG	1 cut(s)	583
AloI	GAACNNNNNNTCC	2 cut(s)	1425, 1457
AluBI	AGCT	9 cut(s)	69, 811, 1316, 1469, 1503, 1733, 2007, 2038, 2165
AluI	AGCT	9 cut(s)	69, 811, 1316, 1469, 1503, 1733, 2007, 2038, 2165
Alw21I	GWGCWC	2 cut(s)	1205, 1530
Alw26I	GTCTC	6 cut(s)	45, 155, 161, 881, 1373, 1828
Alw44I	GTGCAC	1 cut(s)	1201
AlwI	GGATC	7 cut(s)	648, 1016, 1020, 1562, 1598, 1910, 1925
Ama87I	CYCGRG	2 cut(s)	194, 1250
AoxI	GGCC	3 cut(s)	1710, 1746, 1759
ApaLI	GTGCAC	1 cut(s)	1201
ApeKI	GCWGC	9 cut(s)	392, 521, 811, 1001, 1274, 1300, 1469, 2035, 2165
ApoI	RAATTY	3 cut(s)	958, 1241, 1397
AseI	ATTAAT	2 cut(s)	231, 426
Asp700I	GAANNNNTTC	2 cut(s)	1098, 1401
AspA2I	CCTAGG	1 cut(s)	2158
AspLEI	GCGC	2 cut(s)	10, 214
AspS9I	GGNCC	6 cut(s)	1042, 1195, 1436, 1746, 1841, 2147
AsuC2I	CCSGG	1 cut(s)	12
AsuHPI	GGTGA	3 cut(s)	380, 1718, 2095
AvaI	CYCGRG	2 cut(s)	194, 1250
AvaII	GGWCC	5 cut(s)	1042, 1195, 1436, 1841, 2147
AvrII	CCTAGG	1 cut(s)	2158
BaeGI	GKGCMC	3 cut(s)	618, 1205, 2158
BanI	GGYRCC	1 cut(s)	7
BauI	CACGAG	1 cut(s)	2055
BbsI	GAAGAC	1 cut(s)	1983
Bbv12I	GWGCWC	2 cut(s)	1205, 1530
BbvCI	CCTCAGC	1 cut(s)	924
BbvI	GCAGC	9 cut(s)	379, 533, 798, 988, 1286, 1287, 1456, 2047, 2152
BciT130I	CCWGG	1 cut(s)	585
BciVI	GTATCC	2 cut(s)	413, 1348
BcnI	CCSGG	1 cut(s)	12
BcoDI	GTCTC	6 cut(s)	45, 155, 161, 881, 1373, 1828
BfaI	CTAG	6 cut(s)	518, 696, 915, 1886, 2151, 2159
BfmI	CTRYAG	4 cut(s)	1411, 1540, 1941, 2166
BfoI	RGCGCY	1 cut(s)	11
BfuAI	ACCTGC	2 cut(s)	1694, 2159
BfuI	GTATCC	2 cut(s)	413, 1348
BglII	AGATCT	4 cut(s)	1348, 1864, 1882, 2125
BlnI	CCTAGG	1 cut(s)	2158
Bme1390I	CCNGG	2 cut(s)	12, 585
Bme18I	GGWCC	5 cut(s)	1042, 1195, 1436, 1841, 2147
BmeT110I	CYCGRG	2 cut(s)	194, 1250
BmgT120I	GGNCC	6 cut(s)	1042, 1195, 1436, 1746, 1841, 2147
BmiI	GGNNCC	5 cut(s)	9, 200, 1043, 1747, 2148
BmrFI	CCNGG	2 cut(s)	12, 585
BmsI	GCATC	6 cut(s)	199, 541, 675, 958, 1781, 1885
BpiI	GAAGAC	1 cut(s)	1983
BplI	GAGNNNNNCTC	2 cut(s)	318, 350
BpmI	CTGGAG	3 cut(s)	1080, 1452, 1482
Bpu10I	CCTNAGC	1 cut(s)	924
BpuEI	CTTGAG	1 cut(s)	239
BpuMI	CCSGG	1 cut(s)	12
Bsa29I	ATCGAT	1 cut(s)	207
BsaBI	GATNNNNATC	3 cut(s)	78, 948, 985
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	2 cut(s)	45, 161
BsaJI	CCNNGG	4 cut(s)	171, 193, 2158, 2178
BsaXI	ACNNNNNCTCC	2 cut(s)	1425, 1455
Bsc4I	CCNNNNNNNGG	4 cut(s)	610, 1719, 1743, 1768
Bse118I	RCCGGY	1 cut(s)	1689
Bse1I	ACTGG	3 cut(s)	667, 1439, 1458
Bse3DI	GCAATG	3 cut(s)	1446, 1855, 2030
Bse8I	GATNNNNATC	3 cut(s)	78, 948, 985
BseBI	CCWGG	1 cut(s)	585
BseCI	ATCGAT	1 cut(s)	207
BseDI	CCNNGG	4 cut(s)	171, 193, 2158, 2178
BseGI	GGATG	9 cut(s)	94, 666, 986, 1024, 1370, 1496, 1646, 1726, 1876
BseJI	GATNNNNATC	3 cut(s)	78, 948, 985
BseLI	CCNNNNNNNGG	4 cut(s)	610, 1719, 1743, 1768
BseMI	GCAATG	3 cut(s)	1446, 1855, 2030
BseMII	CTCAG	5 cut(s)	35, 156, 847, 915, 1543
BseNI	ACTGG	3 cut(s)	667, 1439, 1458
BseRI	GAGGAG	5 cut(s)	236, 328, 482, 941, 2106
BseSI	GKGCMC	3 cut(s)	618, 1205, 2158
BseXI	GCAGC	9 cut(s)	379, 533, 798, 988, 1286, 1287, 1456, 2047, 2152
BseYI	CCCAGC	2 cut(s)	236, 2234
BsgI	GTGCAG	1 cut(s)	1455
BshFI	GGCC	3 cut(s)	1712, 1748, 1761
BshNI	GGYRCC	1 cut(s)	7
BshVI	ATCGAT	1 cut(s)	207
BsiHKAI	GWGCWC	2 cut(s)	1205, 1530
BsiHKCI	CYCGRG	2 cut(s)	194, 1250
BsiSI	CCGG	4 cut(s)	11, 978, 1650, 1690
BslFI	GGGAC	3 cut(s)	130, 1055, 2160
BslI	CCNNNNNNNGG	4 cut(s)	610, 1719, 1743, 1768
BsmAI	GTCTC	6 cut(s)	45, 155, 161, 881, 1373, 1828
BsmFI	GGGAC	3 cut(s)	130, 1055, 2160
BsmI	GAATGC	3 cut(s)	185, 1490, 2014
BsnI	GGCC	3 cut(s)	1712, 1748, 1761
Bso31I	GGTCTC	2 cut(s)	45, 161
BsoBI	CYCGRG	2 cut(s)	194, 1250
Bsp1286I	GDGCHC	4 cut(s)	618, 1205, 1530, 2158
Bsp1407I	TGTACA	2 cut(s)	744, 1586
BspACI	CCGC	4 cut(s)	37, 258, 525, 2239
BspANI	GGCC	3 cut(s)	1712, 1748, 1761
BspCNI	CTCAG	5 cut(s)	36, 157, 846, 916, 1542
BspDI	ATCGAT	1 cut(s)	207
BspLI	GGNNCC	5 cut(s)	9, 200, 1043, 1747, 2148
BspMAI	CTGCAG	1 cut(s)	2170
BspMI	ACCTGC	2 cut(s)	1694, 2159
BspPI	GGATC	7 cut(s)	648, 1016, 1020, 1562, 1598, 1910, 1925
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	2 cut(s)	45, 161
BsrDI	GCAATG	3 cut(s)	1446, 1855, 2030
BsrFI	RCCGGY	1 cut(s)	1689
BsrGI	TGTACA	2 cut(s)	744, 1586
BsrI	ACTGG	3 cut(s)	667, 1439, 1458
BssAI	RCCGGY	1 cut(s)	1689
BssECI	CCNNGG	4 cut(s)	171, 193, 2158, 2178
BssNI	GRCGYC	1 cut(s)	8
BssSI	CACGAG	1 cut(s)	2055
BssT1I	CCWWGG	2 cut(s)	2158, 2178
Bst2BI	CACGAG	1 cut(s)	2055
Bst2UI	CCWGG	1 cut(s)	585
Bst4CI	ACNGT	8 cut(s)	361, 1123, 1207, 1415, 1426, 1544, 1644, 1982
Bst6I	CTCTTC	4 cut(s)	125, 586, 720, 2200
BstACI	GRCGYC	1 cut(s)	8
BstAPI	GCANNNNNTGC	1 cut(s)	509
BstAUI	TGTACA	2 cut(s)	744, 1586
BstC8I	GCNNGC	3 cut(s)	1168, 1505, 2064
BstDEI	CTNAG	8 cut(s)	44, 165, 786, 833, 893, 924, 1529, 1763
BstENI	CCTNNNNNAGG	1 cut(s)	1766
BstF5I	GGATG	9 cut(s)	94, 666, 986, 1024, 1370, 1496, 1646, 1726, 1876
BstH2I	RGCGCY	1 cut(s)	11
BstHHI	GCGC	2 cut(s)	10, 214
BstMAI	GTCTC	6 cut(s)	45, 155, 161, 881, 1373, 1828
BstMWI	GCNNNNNNNGC	8 cut(s)	182, 509, 518, 920, 1457, 1466, 1709, 2162
BstNI	CCWGG	1 cut(s)	585
BstNSI	RCATGY	2 cut(s)	1783, 2070
BstSCI	CCNGG	2 cut(s)	10, 583
BstSFI	CTRYAG	4 cut(s)	1411, 1540, 1941, 2166
BstSLI	GKGCMC	3 cut(s)	618, 1205, 2158
BstV1I	GCAGC	9 cut(s)	379, 533, 798, 988, 1286, 1287, 1456, 2047, 2152
BstV2I	GAAGAC	1 cut(s)	1983
BstX2I	RGATCY	6 cut(s)	640, 1348, 1864, 1882, 1930, 2125
BstXI	CCANNNNNNTGG	1 cut(s)	1391
BstYI	RGATCY	6 cut(s)	640, 1348, 1864, 1882, 1930, 2125
Bsu15I	ATCGAT	1 cut(s)	207
BsuI	GTATCC	2 cut(s)	413, 1348
BsuRI	GGCC	3 cut(s)	1712, 1748, 1761
BsuTUI	ATCGAT	1 cut(s)	207
BtgZI	GCGATG	2 cut(s)	191, 1986
BtsCI	GGATG	9 cut(s)	94, 666, 986, 1024, 1370, 1496, 1646, 1726, 1876
BtsI	GCAGTG	4 cut(s)	658, 1045, 1606, 1660
BtsIMutI	CAGTG	6 cut(s)	658, 1045, 1203, 1451, 1606, 1660
BveI	ACCTGC	2 cut(s)	1694, 2159
Cac8I	GCNNGC	3 cut(s)	1168, 1505, 2064
CfoI	GCGC	2 cut(s)	10, 214
Cfr10I	RCCGGY	1 cut(s)	1689
Cfr13I	GGNCC	6 cut(s)	1042, 1195, 1436, 1746, 1841, 2147
ClaI	ATCGAT	1 cut(s)	207
CsiI	ACCWGGT	1 cut(s)	583
Csp6I	GTAC	4 cut(s)	745, 1587, 1640, 2000
CviAII	CATG	8 cut(s)	671, 826, 1331, 1631, 1738, 1742, 1780, 2067
CviQI	GTAC	4 cut(s)	745, 1587, 1640, 2000
DdeI	CTNAG	8 cut(s)	44, 165, 786, 833, 893, 924, 1529, 1763
DinI	GGCGCC	1 cut(s)	9
Eam1104I	CTCTTC	4 cut(s)	125, 586, 720, 2200
EarI	CTCTTC	4 cut(s)	125, 586, 720, 2200
Eco130I	CCWWGG	2 cut(s)	2158, 2178
Eco31I	GGTCTC	2 cut(s)	45, 161
Eco32I	GATATC	1 cut(s)	387
Eco47I	GGWCC	5 cut(s)	1042, 1195, 1436, 1841, 2147
Eco57I	CTGAAG	1 cut(s)	498
Eco88I	CYCGRG	2 cut(s)	194, 1250
EcoNI	CCTNNNNNAGG	1 cut(s)	1766
EcoO109I	RGGNCCY	2 cut(s)	1746, 2147
EcoRI	GAATTC	1 cut(s)	1397
EcoRII	CCWGG	1 cut(s)	583
EcoRV	GATATC	1 cut(s)	387
EcoT14I	CCWWGG	2 cut(s)	2158, 2178
EcoT22I	ATGCAT	1 cut(s)	1743
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	2 cut(s)	2158, 2178
FaeI	CATG	8 cut(s)	674, 829, 1334, 1634, 1741, 1745, 1783, 2070
FalI	AAGNNNNNCTT	2 cut(s)	1254, 1286
FaqI	GGGAC	3 cut(s)	130, 1055, 2160
FatI	CATG	8 cut(s)	670, 825, 1330, 1630, 1737, 1741, 1779, 2066
FauI	CCCGC	1 cut(s)	251
FauNDI	CATATG	2 cut(s)	448, 1583
FokI	GGATG	9 cut(s)	101, 653, 993, 1031, 1377, 1483, 1633, 1713, 1863
FspBI	CTAG	6 cut(s)	518, 696, 915, 1886, 2151, 2159
GlaI	GCGC	2 cut(s)	9, 213
GsaI	CCCAGC	2 cut(s)	240, 2238
GsuI	CTGGAG	3 cut(s)	1080, 1452, 1482
HaeII	RGCGCY	1 cut(s)	11
HaeIII	GGCC	3 cut(s)	1712, 1748, 1761
HapII	CCGG	4 cut(s)	11, 978, 1650, 1690
HhaI	GCGC	2 cut(s)	10, 214
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	8 cut(s)	674, 829, 1334, 1634, 1741, 1745, 1783, 2070
Hin6I	GCGC	2 cut(s)	8, 212
HinP1I	GCGC	2 cut(s)	8, 212
HinfI	GANTC	6 cut(s)	79, 292, 577, 782, 1279, 2221
HpaII	CCGG	4 cut(s)	11, 978, 1650, 1690
HphI	GGTGA	3 cut(s)	380, 1718, 2095
Hpy166II	GTNNAC	3 cut(s)	598, 1203, 2002
Hpy188I	TCNGA	7 cut(s)	19, 45, 326, 500, 1224, 1532, 1637
Hpy188III	TCNNGA	8 cut(s)	218, 941, 1016, 1352, 1431, 1816, 1880, 2057
Hpy8I	GTNNAC	3 cut(s)	598, 1203, 2002
HpyAV	CCTTC	5 cut(s)	46, 256, 473, 563, 1088
HpyCH4III	ACNGT	8 cut(s)	361, 1123, 1207, 1415, 1426, 1544, 1644, 1982
HpyCH4IV	ACGT	1 cut(s)	1390
HpyF10VI	GCNNNNNNNGC	8 cut(s)	182, 509, 518, 920, 1457, 1466, 1709, 2162
HpyF3I	CTNAG	8 cut(s)	44, 165, 786, 833, 893, 924, 1529, 1763
HpySE526I	ACGT	1 cut(s)	1390
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	8 cut(s)	674, 829, 1334, 1634, 1741, 1745, 1783, 2070
HspAI	GCGC	2 cut(s)	8, 212
KasI	GGCGCC	1 cut(s)	7
LmnI	GCTCC	4 cut(s)	265, 500, 1968, 2162
Lsp1109I	GCAGC	9 cut(s)	379, 533, 798, 988, 1286, 1287, 1456, 2047, 2152
LweI	GCATC	6 cut(s)	199, 541, 675, 958, 1781, 1885
MabI	ACCWGGT	1 cut(s)	583
MaeI	CTAG	6 cut(s)	518, 696, 915, 1886, 2151, 2159
MaeII	ACGT	1 cut(s)	1390
MaeIII	GTNAC	4 cut(s)	1415, 1655, 2083, 2171
MflI	RGATCY	6 cut(s)	640, 1348, 1864, 1882, 1930, 2125
MhlI	GDGCHC	4 cut(s)	618, 1205, 1530, 2158
MluCI	AATT	7 cut(s)	228, 427, 958, 1066, 1241, 1397, 2184
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	1 cut(s)	776
MmeI	TCCRAC	2 cut(s)	478, 1819
Mph1103I	ATGCAT	1 cut(s)	1743
MroXI	GAANNNNTTC	2 cut(s)	1098, 1401
MseI	TTAA	8 cut(s)	123, 231, 426, 804, 1239, 1520, 1986, 2021
MslI	CAYNNNNRTG	3 cut(s)	111, 1483, 1559
MspI	CCGG	4 cut(s)	11, 978, 1650, 1690
MspR9I	CCNGG	2 cut(s)	12, 585
Mva1269I	GAATGC	3 cut(s)	185, 1490, 2014
MvaI	CCWGG	1 cut(s)	585
MwoI	GCNNNNNNNGC	8 cut(s)	182, 509, 518, 920, 1457, 1466, 1709, 2162
NarI	GGCGCC	1 cut(s)	8
NciI	CCSGG	1 cut(s)	12
NdeI	CATATG	2 cut(s)	448, 1583
NlaIII	CATG	8 cut(s)	674, 829, 1334, 1634, 1741, 1745, 1783, 2070
NlaIV	GGNNCC	5 cut(s)	9, 200, 1043, 1747, 2148
NmuCI	GTSAC	2 cut(s)	1655, 2083
NsiI	ATGCAT	1 cut(s)	1743
NspI	RCATGY	2 cut(s)	1783, 2070
PaqCI	CACCTGC	1 cut(s)	1694
PctI	GAATGC	3 cut(s)	185, 1490, 2014
PdmI	GAANNNNTTC	2 cut(s)	1098, 1401
PfeI	GAWTC	5 cut(s)	79, 292, 577, 1279, 2221
PflFI	GACNNNGTC	1 cut(s)	821
PflMI	CCANNNNNTGG	1 cut(s)	610
PleI	GAGTC	1 cut(s)	776
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	1 cut(s)	776
PpuMI	RGGWCCY	1 cut(s)	2147
PshBI	ATTAAT	2 cut(s)	231, 426
PsiI	TTATAA	1 cut(s)	414
Psp5II	RGGWCCY	1 cut(s)	2147
Psp6I	CCWGG	1 cut(s)	583
PspFI	CCCAGC	2 cut(s)	236, 2234
PspGI	CCWGG	1 cut(s)	583
PspN4I	GGNNCC	5 cut(s)	9, 200, 1043, 1747, 2148
PspPI	GGNCC	6 cut(s)	1042, 1195, 1436, 1746, 1841, 2147
PspPPI	RGGWCCY	1 cut(s)	2147
PstI	CTGCAG	1 cut(s)	2170
PsuI	RGATCY	6 cut(s)	640, 1348, 1864, 1882, 1930, 2125
PsyI	GACNNNGTC	1 cut(s)	821
RsaI	GTAC	4 cut(s)	746, 1588, 1641, 2001
RsaNI	GTAC	4 cut(s)	745, 1587, 1640, 2000
RseI	CAYNNNNRTG	3 cut(s)	111, 1483, 1559
SaqAI	TTAA	8 cut(s)	123, 231, 426, 804, 1239, 1520, 1986, 2021
Sau96I	GGNCC	6 cut(s)	1042, 1195, 1436, 1746, 1841, 2147
SchI	GAGTC	1 cut(s)	776
ScrFI	CCNGG	2 cut(s)	12, 585
SduI	GDGCHC	4 cut(s)	618, 1205, 1530, 2158
SexAI	ACCWGGT	1 cut(s)	583
SfaNI	GCATC	6 cut(s)	199, 541, 675, 958, 1781, 1885
SfcI	CTRYAG	4 cut(s)	1411, 1540, 1941, 2166
SfoI	GGCGCC	1 cut(s)	9
SinI	GGWCC	5 cut(s)	1042, 1195, 1436, 1841, 2147
SmiMI	CAYNNNNRTG	3 cut(s)	111, 1483, 1559
SmlI	CTYRAG	1 cut(s)	218
SmoI	CTYRAG	1 cut(s)	218
Sse9I	AATT	7 cut(s)	228, 427, 958, 1066, 1241, 1397, 2184
SsiI	CCGC	4 cut(s)	37, 258, 525, 2239
SspDI	GGCGCC	1 cut(s)	7
SspMI	CTAG	6 cut(s)	518, 696, 915, 1886, 2151, 2159
StyD4I	CCNGG	2 cut(s)	10, 583
StyI	CCWWGG	2 cut(s)	2158, 2178
TaaI	ACNGT	8 cut(s)	361, 1123, 1207, 1415, 1426, 1544, 1644, 1982
TaiI	ACGT	1 cut(s)	1393
TaqI	TCGA	5 cut(s)	207, 580, 780, 1183, 1513
TaqII	GACCGA	1 cut(s)	185
TasI	AATT	7 cut(s)	228, 427, 958, 1066, 1241, 1397, 2184
TatI	WGTACW	3 cut(s)	744, 1586, 1639
TauI	GCSGC	2 cut(s)	527, 2242
TfiI	GAWTC	5 cut(s)	79, 292, 577, 1279, 2221
Tru1I	TTAA	8 cut(s)	123, 231, 426, 804, 1239, 1520, 1986, 2021
Tru9I	TTAA	8 cut(s)	123, 231, 426, 804, 1239, 1520, 1986, 2021
TscAI	CASTG	6 cut(s)	658, 1052, 1210, 1458, 1606, 1660
TseFI	GTSAC	2 cut(s)	1655, 2083
TseI	GCWGC	9 cut(s)	392, 521, 811, 1001, 1274, 1300, 1469, 2035, 2165
Tsp45I	GTSAC	2 cut(s)	1655, 2083
TspDTI	ATGAA	7 cut(s)	707, 1044, 1389, 1499, 1611, 1893, 1989
TspRI	CASTG	6 cut(s)	658, 1052, 1210, 1458, 1606, 1660
Tth111I	GACNNNGTC	1 cut(s)	821
Van91I	CCANNNNNTGG	1 cut(s)	610
VneI	GTGCAC	1 cut(s)	1201
VpaK11BI	GGWCC	5 cut(s)	1042, 1195, 1436, 1841, 2147
VspI	ATTAAT	2 cut(s)	231, 426
XagI	CCTNNNNNAGG	1 cut(s)	1766
XapI	RAATTY	3 cut(s)	958, 1241, 1397
XceI	RCATGY	2 cut(s)	1783, 2070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1427
XmaJI	CCTAGG	1 cut(s)	2158
XmnI	GAANNNNTTC	2 cut(s)	1098, 1401
XspI	CTAG	6 cut(s)	518, 696, 915, 1886, 2151, 2159
Zsp2I	ATGCAT	1 cut(s)	1743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.