Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013080

Physical Location & Seq

Genomic Coordinates Reverse (-)

4949178 .. 4951346

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G14730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGACCGTCTCGTTTCTACGGATCGAGATTCAAAATTGTTCTGCCGGAATTTTGAGATTTCTCCCACGGAACCCAGATTTATTCGCAGCTATAAAGCCTTCTTCTGCTTTAGCATCTTTATATTCGACTGTTTCTGGGCAAATCGAAGAAAACCCGAAGAGATACGAGCACCACAATGTTGCTACATGTATCGCCACATTGCAACGCTGTGCACAGCGCAAAGATTACGTTTCCGGCCAACAGATCCACGGTTTCATGGTTAGAAAAGGGTTTCTGGATGATTCGCCACGCGCCGGCACGAGCCTCGTTAACATGTACGCTAAGTGTGGTCTCATGCGGCGTGCGGTGTTGGTCTTTGGTGGATCCGAACGCGATGTATTTGGTTACAACGCTTTGATTTCTGGGTTTGTGGTAAATGGGTCTCCTTTGGATGCGATGGAGACGTACAGAGAAATGAGAGCTAATGGGATTTTACCTGATAAGTATACATTTCCTAGTTTGCTAAAAGGAAGCGATGCTATGGAGCTTTCTGATGTTAAGAAGGTTCATGGATTGGCGTTTAAACTTGGGTTTGATTCCGATTGTTATGTGGGGAGTGGCTTAGTTACTTCTTACTCGAAGTTCATGTCAGTGGAGGATGCTCAGAAGGTGTTCGATGAATTGCCTGATAGAGATGACAGTGTGCTTTGGAATGCTTTAGTTAATGGGTATTCACAGATTTTTAGATTTGAGGATGCTTTATTAGTCTTTAGTAAAATGCGTGAAGAAGGTGTAGGTGTGAGCAGGCATACCATTACAAGCGTCTTATCAGCATTTACTGTTTCAGGGGATATTGACAACGGTAGGTCAATCCATGGCCTTGCGGTGAAAACGGGATCTGGTTCTGATATTGTTGTGTCAAATGCATTGATTGATATGTATGGGAAGAGTAAATGGCTAGAAGAGGCAAACAGTATATTCGAAGCAATGGATGAGAGAGACCTGTTTACATGGAACTCTGTTTTATGTGTTCATGACTACTGTGGTGATCATGATGGAACATTAGCTCTTTTCGAAAGGATGCTTTGTTCTGGAATCCGACCTGATATTGTTACATTGACAACTGTTCTGCCCACCTGCGGTCGTCTAGCTTCACTGAGGCAGGGCAGAGAGATTCATGGGTACATGATCGTCAGTGGACTTCTAAACCGCAAATCTAGTAATGAATTTATACATAATTCTTTGATGGATATGTACGTGAAATGCGGGGACTTGAGGGACGCTCGGATGGTTTTCGACTCAATGAGGGTTAAAGACTCAGCTTCTTGGAATATTATGATTAATGGCTATGGTGTGCAGAGCTGCGGTGAGTTAGCTTTGGATATGTTTTCATGTATGTGCAGAGCCGGTGTCAAACCCGATGAAATCACATTTGTTGGGTTGCTACAAGCGTGTAGCCACTCTGGTTTTTTGAACGAAGGGAGAAATTTTTTGGCACAGATGGAGACGGTATATAACATTCTCCCAACAAGTGATCACTACGCTTGTGTAATAGACATGCTTGGCCGTGCAGACAAGCTAGAGGAAGCATATGAGTTAGCAATATCAAAGCCCATTTGCGATAATCCTGTAGTCTGGCGGTCAATATTGTCATCTTGTCGTCTCCACGGGAACAAAGATCTCGCACTGGTGGCAGGAAAGCGGCTACATGAGCTCGAGCCAGAGCATTGTGGCGGTTATGTATTAATGTCTAATGTTTATGTGGAAGCTGGGAAGTACGAGGAAGTGTTGGACGTTAGAGACGCAATGAGACAACAGAATGTGAAGAAGACACCAGGTTGCAGCTGGATTGTGCTCAAGAACGGTGTTCACACGTTCTTTACCGGCAATCAGACTCACCCGGAATTTAAATCTATCCACGATTGGTTAAGCCTAGTGATTTCTCATATGCACGGTCATGAGTATATGACGGTCGACGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

653

Amino Acids

72.71

Weight (kDa)

5.85

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	124 - 170	7e-11	PPR repeat family
PPR_2	PF13041	226 - 272	4.2e-07	PPR repeat family
PPR_2	PF13041	327 - 373	5.8e-06	PPR repeat family
PPR_2	PF13041	432 - 479	6.6e-10	PPR repeat family
E_motif	PF20431	549 - 610	5.6e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14730
malus_domestica	MD05G1289700.v1.1
prunus_persica	Prupe.4G076000_v2.0.a1
pyrus_communis	pycom05g26680
rosa_chinensis	RchiOBHm_Chr7g0219901
rosa_laevigata	RLG00000009523 RLG00000031996
rosa_multiflora	Rmu_sc0004521.1_g000007
rosa_roxburghii	Rroxscaffold_1G00063400
rosa_rugosa	Rorug05G0007900
rosa_samantha	Rh4BG067800 Rh4CG075700 Rh5AG101900 Rh5AG102300 Rh5BG098600 Rh5CG110800 Rh5DG097900
rosa_wichuraiana	Rw5G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1124
Acc36I	ACCTGC	1 cut(s)	1124
AccI	GTMKAC	2 cut(s)	485, 1953
AccII	CGCG	2 cut(s)	291, 372
AclWI	GGATC	5 cut(s)	29, 238, 357, 370, 883
AcoI	YGGCCR	2 cut(s)	235, 1543
AcsI	RAATTY	4 cut(s)	48, 1205, 1465, 1883
AfaI	GTAC	5 cut(s)	317, 446, 1163, 1235, 1757
AfiI	CCNNNNNNNGG	2 cut(s)	293, 1118
AflIII	ACRYGT	3 cut(s)	185, 312, 1851
AgsI	TTSAA	2 cut(s)	32, 1453
AjnI	CCWGG	1 cut(s)	1813
AloI	GAACNNNNNNTCC	2 cut(s)	1051, 1083
Alw21I	GWGCWC	4 cut(s)	171, 214, 1695, 1836
Alw26I	GTCTC	9 cut(s)	13, 335, 426, 434, 972, 1478, 1646, 1773, 1783
Alw44I	GTGCAC	1 cut(s)	210
AlwI	GGATC	5 cut(s)	29, 238, 357, 370, 883
Ama87I	CYCGRG	1 cut(s)	1694
AoxI	GGCC	3 cut(s)	235, 856, 1543
ApaLI	GTGCAC	1 cut(s)	210
ApeKI	GCWGC	3 cut(s)	86, 1341, 1821
ApoI	RAATTY	4 cut(s)	48, 1205, 1465, 1883
ArsI	GACNNNNNNTTYG	2 cut(s)	611, 643
AseI	ATTAAT	2 cut(s)	1320, 1724
Asp700I	GAANNNNTTC	1 cut(s)	650
AspLEI	GCGC	2 cut(s)	219, 293
AsuC2I	CCSGG	1 cut(s)	1880
AsuHPI	GGTGA	4 cut(s)	877, 1037, 1358, 1868
AsuII	TTCGAA	2 cut(s)	960, 1053
AvaI	CYCGRG	1 cut(s)	1694
BaeGI	GKGCMC	1 cut(s)	214
BamHI	GGATCC	1 cut(s)	362
BanII	GRGCYC	1 cut(s)	1695
BauI	CACGAG	1 cut(s)	298
BbsI	GAAGAC	1 cut(s)	1814
Bbv12I	GWGCWC	4 cut(s)	171, 214, 1695, 1836
BbvI	GCAGC	3 cut(s)	98, 1328, 1833
BccI	CCATC	5 cut(s)	430, 1028, 1219, 1261, 1474
BceAI	ACGGC	1 cut(s)	1530
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	1 cut(s)	1815
BclI	TGATCA	2 cut(s)	1027, 1513
BcnI	CCSGG	1 cut(s)	1880
BcoDI	GTCTC	9 cut(s)	13, 335, 426, 434, 972, 1478, 1646, 1773, 1783
BfaI	CTAG	6 cut(s)	495, 938, 1127, 1197, 1559, 1913
BfmI	CTRYAG	1 cut(s)	1608
BfuAI	ACCTGC	1 cut(s)	1124
BglII	AGATCT	1 cut(s)	1657
BisI	GCNGC	5 cut(s)	87, 338, 1342, 1682, 1822
BlsI	GCNGC	5 cut(s)	88, 339, 1343, 1683, 1823
Bme1390I	CCNGG	2 cut(s)	1815, 1880
BmeT110I	CYCGRG	1 cut(s)	1694
BmiI	GGNNCC	2 cut(s)	71, 364
BmrFI	CCNGG	2 cut(s)	1815, 1880
BmsI	GCATC	6 cut(s)	122, 421, 505, 628, 724, 1050
BpiI	GAAGAC	1 cut(s)	1814
BplI	GAGNNNNNCTC	2 cut(s)	1246, 1278
Bpu14I	TTCGAA	2 cut(s)	960, 1053
BpuEI	CTTGAG	2 cut(s)	1273, 1820
BpuMI	CCSGG	1 cut(s)	1880
BsaAI	YACGTR	1 cut(s)	1237
BsaI	GGTCTC	3 cut(s)	335, 426, 972
BsaJI	CCNNGG	4 cut(s)	65, 247, 853, 1645
Bsc4I	CCNNNNNNNGG	2 cut(s)	293, 1118
Bse118I	RCCGGY	3 cut(s)	293, 1385, 1862
Bse1I	ACTGG	1 cut(s)	1671
Bse3DI	GCAATG	3 cut(s)	197, 972, 1791
BseBI	CCWGG	1 cut(s)	1815
BseDI	CCNNGG	4 cut(s)	65, 247, 853, 1645
BseGI	GGATG	7 cut(s)	283, 436, 643, 739, 976, 1065, 1272
BseLI	CCNNNNNNNGG	2 cut(s)	293, 1118
BseMI	GCAATG	3 cut(s)	197, 972, 1791
BseMII	CTCAG	3 cut(s)	656, 1127, 1311
BseNI	ACTGG	1 cut(s)	1671
BseSI	GKGCMC	1 cut(s)	214
BseXI	GCAGC	3 cut(s)	98, 1328, 1833
BseYI	CCCAGC	1 cut(s)	1748
BsgI	GTGCAG	3 cut(s)	1355, 1399, 1569
Bsh1236I	CGCG	2 cut(s)	291, 372
Bsh1285I	CGRYCG	2 cut(s)	1123, 1953
BshFI	GGCC	3 cut(s)	237, 858, 1545
BsiEI	CGRYCG	2 cut(s)	1123, 1953
BsiHKAI	GWGCWC	4 cut(s)	171, 214, 1695, 1836
BsiHKCI	CYCGRG	1 cut(s)	1694
BsiSI	CCGG	6 cut(s)	45, 234, 294, 1386, 1863, 1880
BslFI	GGGAC	2 cut(s)	1262, 1271
BslI	CCNNNNNNNGG	2 cut(s)	293, 1118
BsmAI	GTCTC	9 cut(s)	13, 335, 426, 434, 972, 1478, 1646, 1773, 1783
BsmBI	CGTCTC	5 cut(s)	13, 434, 1478, 1646, 1773
BsmFI	GGGAC	2 cut(s)	1262, 1271
BsmI	GAATGC	1 cut(s)	697
BsnI	GGCC	3 cut(s)	237, 858, 1545
Bso31I	GGTCTC	3 cut(s)	335, 426, 972
BsoBI	CYCGRG	1 cut(s)	1694
Bsp119I	TTCGAA	2 cut(s)	960, 1053
Bsp1286I	GDGCHC	4 cut(s)	171, 214, 1695, 1836
Bsp143I	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
Bsp19I	CCATGG	1 cut(s)	853
BspANI	GGCC	3 cut(s)	237, 858, 1545
BspCNI	CTCAG	3 cut(s)	655, 1128, 1310
BspFNI	CGCG	2 cut(s)	291, 372
BspHI	TCATGA	3 cut(s)	1012, 1030, 1936
BspLI	GGNNCC	2 cut(s)	71, 364
BspMI	ACCTGC	1 cut(s)	1124
BspPI	GGATC	5 cut(s)	29, 238, 357, 370, 883
BspT104I	TTCGAA	2 cut(s)	960, 1053
BspTNI	GGTCTC	3 cut(s)	335, 426, 972
BsrDI	GCAATG	3 cut(s)	197, 972, 1791
BsrFI	RCCGGY	3 cut(s)	293, 1385, 1862
BsrI	ACTGG	1 cut(s)	1671
BssAI	RCCGGY	3 cut(s)	293, 1385, 1862
BssECI	CCNNGG	4 cut(s)	65, 247, 853, 1645
BssMI	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
BssNAI	GTATAC	1 cut(s)	486
BssSI	CACGAG	1 cut(s)	298
BssT1I	CCWWGG	1 cut(s)	853
Bst1107I	GTATAC	1 cut(s)	486
Bst2BI	CACGAG	1 cut(s)	298
Bst2UI	CCWGG	1 cut(s)	1815
Bst6I	CTCTTC	3 cut(s)	152, 920, 936
BstBAI	YACGTR	1 cut(s)	1237
BstBI	TTCGAA	2 cut(s)	960, 1053
BstC8I	GCNNGC	3 cut(s)	295, 342, 785
BstDEI	CTNAG	5 cut(s)	321, 601, 642, 1136, 1297
BstDSI	CCRYGG	4 cut(s)	65, 247, 853, 1645
BstF5I	GGATG	7 cut(s)	283, 436, 643, 739, 976, 1065, 1272
BstFNI	CGCG	2 cut(s)	291, 372
BstHHI	GCGC	2 cut(s)	219, 293
BstKTI	GATC	8 cut(s)	24, 246, 365, 878, 1030, 1170, 1516, 1660
BstMAI	GTCTC	9 cut(s)	13, 335, 426, 434, 972, 1478, 1646, 1773, 1783
BstMBI	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
BstMCI	CGRYCG	2 cut(s)	1123, 1953
BstMWI	GCNNNNNNNGC	2 cut(s)	1670, 1690
BstNI	CCWGG	1 cut(s)	1815
BstNSI	RCATGY	3 cut(s)	189, 316, 1540
BstSCI	CCNGG	2 cut(s)	1813, 1878
BstSFI	CTRYAG	1 cut(s)	1608
BstSLI	GKGCMC	1 cut(s)	214
BstUI	CGCG	2 cut(s)	291, 372
BstV1I	GCAGC	3 cut(s)	98, 1328, 1833
BstV2I	GAAGAC	1 cut(s)	1814
BstX2I	RGATCY	4 cut(s)	243, 362, 875, 1657
BstYI	RGATCY	4 cut(s)	243, 362, 875, 1657
BstZ17I	GTATAC	1 cut(s)	486
BsuRI	GGCC	3 cut(s)	237, 858, 1545
BtgI	CCRYGG	4 cut(s)	65, 247, 853, 1645
BtgZI	GCGATG	3 cut(s)	387, 449, 528
BtsCI	GGATG	7 cut(s)	283, 436, 643, 739, 976, 1065, 1272
BtsIMutI	CAGTG	5 cut(s)	636, 685, 1133, 1180, 1664
BveI	ACCTGC	1 cut(s)	1124
Cac8I	GCNNGC	3 cut(s)	295, 342, 785
CciI	TCATGA	3 cut(s)	1012, 1030, 1936
CfoI	GCGC	2 cut(s)	219, 293
Cfr10I	RCCGGY	3 cut(s)	293, 1385, 1862
CseI	GACGC	3 cut(s)	790, 1268, 1790
CsiI	ACCWGGT	1 cut(s)	1813
Csp6I	GTAC	5 cut(s)	316, 445, 1162, 1234, 1756
CviQI	GTAC	5 cut(s)	316, 445, 1162, 1234, 1756
DdeI	CTNAG	5 cut(s)	321, 601, 642, 1136, 1297
DpnI	GATC	8 cut(s)	23, 245, 364, 877, 1029, 1169, 1515, 1659
DpnII	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
DraI	TTTAAA	2 cut(s)	562, 1888
EaeI	YGGCCR	2 cut(s)	235, 1543
Eam1104I	CTCTTC	3 cut(s)	152, 920, 936
EarI	CTCTTC	3 cut(s)	152, 920, 936
Ecl136II	GAGCTC	1 cut(s)	1693
Eco130I	CCWWGG	1 cut(s)	853
Eco24I	GRGCYC	1 cut(s)	1695
Eco31I	GGTCTC	3 cut(s)	335, 426, 972
Eco53kI	GAGCTC	1 cut(s)	1693
Eco88I	CYCGRG	1 cut(s)	1694
EcoICRI	GAGCTC	1 cut(s)	1693
EcoRII	CCWGG	1 cut(s)	1813
EcoT14I	CCWWGG	1 cut(s)	853
EcoT22I	ATGCAT	1 cut(s)	907
EcoT38I	GRGCYC	1 cut(s)	1695
ErhI	CCWWGG	1 cut(s)	853
Esp3I	CGTCTC	5 cut(s)	13, 434, 1478, 1646, 1773
FaqI	GGGAC	2 cut(s)	1262, 1271
FauI	CCCGC	1 cut(s)	1238
FauNDI	CATATG	2 cut(s)	1570, 1926
FbaI	TGATCA	2 cut(s)	1027, 1513
FblI	GTMKAC	2 cut(s)	485, 1953
Fnu4HI	GCNGC	5 cut(s)	87, 338, 1342, 1682, 1822
FokI	GGATG	7 cut(s)	290, 443, 650, 746, 983, 1072, 1279
FriOI	GRGCYC	1 cut(s)	1695
Fsp4HI	GCNGC	5 cut(s)	87, 338, 1342, 1682, 1822
FspBI	CTAG	6 cut(s)	495, 938, 1127, 1197, 1559, 1913
GlaI	GCGC	2 cut(s)	218, 292
GluI	GCNGC	5 cut(s)	87, 338, 1342, 1682, 1822
GsaI	CCCAGC	1 cut(s)	1752
HaeIII	GGCC	3 cut(s)	237, 858, 1545
HapII	CCGG	6 cut(s)	45, 234, 294, 1386, 1863, 1880
HgaI	GACGC	3 cut(s)	790, 1268, 1790
HhaI	GCGC	2 cut(s)	219, 293
Hin6I	GCGC	2 cut(s)	217, 291
HinP1I	GCGC	2 cut(s)	217, 291
HincII	GTYRAC	2 cut(s)	310, 1954
HindII	GTYRAC	2 cut(s)	310, 1954
HinfI	GANTC	8 cut(s)	28, 281, 575, 1074, 1153, 1277, 1295, 1873
HpaI	GTTAAC	1 cut(s)	310
HpaII	CCGG	6 cut(s)	45, 234, 294, 1386, 1863, 1880
HphI	GGTGA	4 cut(s)	877, 1037, 1358, 1868
Hpy166II	GTNNAC	7 cut(s)	212, 310, 486, 987, 1178, 1849, 1954
Hpy188I	TCNGA	8 cut(s)	367, 532, 580, 645, 886, 1079, 1266, 1872
Hpy188III	TCNNGA	7 cut(s)	25, 275, 1013, 1031, 1071, 1837, 1937
Hpy8I	GTNNAC	7 cut(s)	212, 310, 486, 987, 1178, 1849, 1954
Hpy99I	CGWCG	1 cut(s)	1958
HpyAV	CCTTC	5 cut(s)	108, 535, 640, 761, 1451
HpyCH4IV	ACGT	5 cut(s)	228, 443, 1236, 1773, 1853
HpyCH4V	TGCA	8 cut(s)	202, 212, 905, 1336, 1380, 1550, 1821, 1930
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1670, 1690
HpyF3I	CTNAG	5 cut(s)	321, 601, 642, 1136, 1297
HpySE526I	ACGT	5 cut(s)	228, 443, 1236, 1773, 1853
HspAI	GCGC	2 cut(s)	217, 291
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
Ksp22I	TGATCA	2 cut(s)	1027, 1513
KspAI	GTTAAC	1 cut(s)	310
Kzo9I	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
LmnI	GCTCC	1 cut(s)	523
Lsp1109I	GCAGC	3 cut(s)	98, 1328, 1833
LweI	GCATC	6 cut(s)	122, 421, 505, 628, 724, 1050
MabI	ACCWGGT	1 cut(s)	1813
MaeI	CTAG	6 cut(s)	495, 938, 1127, 1197, 1559, 1913
MaeII	ACGT	5 cut(s)	228, 443, 1236, 1773, 1853
MaeIII	GTNAC	3 cut(s)	383, 604, 1090
MalI	GATC	8 cut(s)	23, 245, 364, 877, 1029, 1169, 1515, 1659
MboI	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
MboII	GAAGA	8 cut(s)	93, 158, 169, 776, 937, 953, 1816, 1819
MflI	RGATCY	4 cut(s)	243, 362, 875, 1657
MhlI	GDGCHC	4 cut(s)	171, 214, 1695, 1836
MluCI	AATT	7 cut(s)	34, 48, 659, 1205, 1216, 1465, 1883
MlyI	GAGTC	3 cut(s)	1271, 1289, 1867
MmeI	TCCRAC	2 cut(s)	1102, 1749
MnlI	CCTC	9 cut(s)	314, 628, 724, 937, 1131, 1248, 1278, 1555, 1753
Mph1103I	ATGCAT	1 cut(s)	907
MroNI	GCCGGC	1 cut(s)	293
MroXI	GAANNNNTTC	1 cut(s)	650
MseI	TTAA	9 cut(s)	309, 537, 561, 702, 1290, 1320, 1724, 1887, 1907
MslI	CAYNNNNRTG	4 cut(s)	174, 629, 1375, 1935
MspA1I	CMGCKG	1 cut(s)	1824
MspI	CCGG	6 cut(s)	45, 234, 294, 1386, 1863, 1880
MspR9I	CCNGG	2 cut(s)	1815, 1880
MssI	GTTTAAAC	1 cut(s)	562
Mva1269I	GAATGC	1 cut(s)	697
MvaI	CCWGG	1 cut(s)	1815
MvnI	CGCG	2 cut(s)	291, 372
MwoI	GCNNNNNNNGC	2 cut(s)	1670, 1690
NaeI	GCCGGC	1 cut(s)	295
NciI	CCSGG	1 cut(s)	1880
NcoI	CCATGG	1 cut(s)	853
NdeI	CATATG	2 cut(s)	1570, 1926
NdeII	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
NgoMIV	GCCGGC	1 cut(s)	293
NlaIV	GGNNCC	2 cut(s)	71, 364
NsiI	ATGCAT	1 cut(s)	907
NspI	RCATGY	3 cut(s)	189, 316, 1540
NspV	TTCGAA	2 cut(s)	960, 1053
PaeR7I	CTCGAG	1 cut(s)	1694
PagI	TCATGA	3 cut(s)	1012, 1030, 1936
PaqCI	CACCTGC	1 cut(s)	1124
PciI	ACATGT	2 cut(s)	185, 312
PctI	GAATGC	1 cut(s)	697
PdiI	GCCGGC	1 cut(s)	295
PdmI	GAANNNNTTC	1 cut(s)	650
PfeI	GAWTC	5 cut(s)	28, 281, 575, 1074, 1153
PkrI	GCNGC	5 cut(s)	88, 339, 1343, 1683, 1823
PleI	GAGTC	3 cut(s)	1271, 1289, 1867
PmeI	GTTTAAAC	1 cut(s)	562
PpsI	GAGTC	3 cut(s)	1271, 1289, 1867
Ppu21I	YACGTR	1 cut(s)	1237
PscI	ACATGT	2 cut(s)	185, 312
PshBI	ATTAAT	2 cut(s)	1320, 1724
Psp124BI	GAGCTC	1 cut(s)	1695
Psp6I	CCWGG	1 cut(s)	1813
PspFI	CCCAGC	1 cut(s)	1748
PspGI	CCWGG	1 cut(s)	1813
PspN4I	GGNNCC	2 cut(s)	71, 364
PspXI	VCTCGAGB	1 cut(s)	1694
PsuI	RGATCY	4 cut(s)	243, 362, 875, 1657
PvuII	CAGCTG	1 cut(s)	1824
RsaI	GTAC	5 cut(s)	317, 446, 1163, 1235, 1757
RsaNI	GTAC	5 cut(s)	316, 445, 1162, 1234, 1756
RseI	CAYNNNNRTG	4 cut(s)	174, 629, 1375, 1935
SacI	GAGCTC	1 cut(s)	1695
SalI	GTCGAC	1 cut(s)	1952
SaqAI	TTAA	9 cut(s)	309, 537, 561, 702, 1290, 1320, 1724, 1887, 1907
SatI	GCNGC	5 cut(s)	87, 338, 1342, 1682, 1822
Sau3AI	GATC	8 cut(s)	21, 243, 362, 875, 1027, 1167, 1513, 1657
SchI	GAGTC	3 cut(s)	1271, 1289, 1867
ScrFI	CCNGG	2 cut(s)	1815, 1880
SduI	GDGCHC	4 cut(s)	171, 214, 1695, 1836
SexAI	ACCWGGT	1 cut(s)	1813
SfaNI	GCATC	6 cut(s)	122, 421, 505, 628, 724, 1050
SfcI	CTRYAG	1 cut(s)	1608
Sfr274I	CTCGAG	1 cut(s)	1694
SfuI	TTCGAA	2 cut(s)	960, 1053
SlaI	CTCGAG	1 cut(s)	1694
SmiI	ATTTAAAT	1 cut(s)	1888
SmiMI	CAYNNNNRTG	4 cut(s)	174, 629, 1375, 1935
SmlI	CTYRAG	3 cut(s)	1252, 1694, 1835
SmoI	CTYRAG	3 cut(s)	1252, 1694, 1835
Sse9I	AATT	7 cut(s)	34, 48, 659, 1205, 1216, 1465, 1883
SspI	AATATT	2 cut(s)	1312, 1626
SspMI	CTAG	6 cut(s)	495, 938, 1127, 1197, 1559, 1913
SstI	GAGCTC	1 cut(s)	1695
StyD4I	CCNGG	2 cut(s)	1813, 1878
StyI	CCWWGG	1 cut(s)	853
SwaI	ATTTAAAT	1 cut(s)	1888
TaiI	ACGT	5 cut(s)	231, 446, 1239, 1776, 1856
TasI	AATT	7 cut(s)	34, 48, 659, 1205, 1216, 1465, 1883
TauI	GCSGC	2 cut(s)	340, 1684
TfiI	GAWTC	5 cut(s)	28, 281, 575, 1074, 1153
Tru1I	TTAA	9 cut(s)	309, 537, 561, 702, 1290, 1320, 1724, 1887, 1907
Tru9I	TTAA	9 cut(s)	309, 537, 561, 702, 1290, 1320, 1724, 1887, 1907
TscAI	CASTG	5 cut(s)	636, 685, 1140, 1180, 1671
TseI	GCWGC	3 cut(s)	86, 1341, 1821
TspDTI	ATGAA	9 cut(s)	244, 536, 613, 672, 1001, 1145, 1218, 1359, 1416
TspGWI	ACGGA	2 cut(s)	34, 82
TspRI	CASTG	5 cut(s)	636, 685, 1140, 1180, 1671
VneI	GTGCAC	1 cut(s)	210
VspI	ATTAAT	2 cut(s)	1320, 1724
XapI	RAATTY	4 cut(s)	48, 1205, 1465, 1883
XceI	RCATGY	3 cut(s)	189, 316, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1821
XhoI	CTCGAG	1 cut(s)	1694
XmiI	GTMKAC	2 cut(s)	485, 1953
XmnI	GAANNNNTTC	1 cut(s)	650
XspI	CTAG	6 cut(s)	495, 938, 1127, 1197, 1559, 1913
Zsp2I	ATGCAT	1 cut(s)	907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.