Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0013080

Physical Location & Seq

Genomic Coordinates Forward (+)

42183478 .. 42185361

Gene Structure 1884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1289700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGAACAAAGCCACCAATTTGTTCAGGAACCCATCTGTTTCTCTGCGCCTCAGCTCCTCCTTCTCGCACTCCGCTGCCCGGTCGCCTGCTCAGTCGCCGCACGACCTCGCTGCCTGCATAGCTTCCCTTCAAGCATGCGCCCGCCGCCAGAATCTCAGAAAAGGCAAGCAAGTCCACTCATTTATGCTCGCCAATGGCTTCCTCCGTTCCCCTCTCTCCACCACCAGCCTTATCAACATGTACTCCAAGTGCAACCAGATGGACGACGCCGTTTCGACTTTCAATTATCAGTCTTTTGACCACAATGTGTTTGCTTACAATGCTGTCATTGCTGGGTTTATAGCAAACGGGTTGGGTAGAGATGGGTTCGAGTTTTATAGAAGAATGCGGTTTGCCGGTGTTATGCCGGATAAGTTTACGTTTCCGTGTGTGATTAGGGGTTGCAGCGGGGTTCTGGAGTTGAGGAAGATTCATGGGTTGGTGGTGAAATTTGGGTTGGAGTTGGATGTGTATGTTGGCAGTGCTCTGGTGAATACGTATTTGAAATTGGGGTTGATGGAGGAGGCACAGGAAGTGTTTGACGAATTGCCTGTTAGAGATGTTGTGCTTTGGAATGCAATGGTTAATGGGTTTGCGCAGATTGGGCTGCTTGAGGAGGCTTTGGCGGTGTTTAGTATGATGGGTGAGGAAGGGGTTGTGCCGAGTAGGTTTACCGTGACTGGGGTCTTGTCTATTTTCGCTGTGATGGGTGGTTTTGACAATGGGAGAGCGGTGCATGGGTTTGCGACGAAAATGGGGTATGATTCAGGTGTTGAGGTTTTGAATGCGTTGATTGACATGTATGGGAAATGCAAGTGTGTTGGAGACGCCTTGAAGATTTTTGAGATGATGGTTGAGAAGGATATATATTCGTGGAACTCAATTATTGCAGTGCATGAGCATTGCGGTGATCACGATGGGACTCTGAGGCTTTTTGATAGAATGTTAAGGGGTGGAGTTCTTCCTGATTTGGTAACCATCACGACTGTCCTTCCAGTGTGTGCTCGTCTGGCAGCATTGATGCATGGTAGAGAAATTCATGGATATATGATTAAAAATGGGTTGGAGAAGGATGTGAATGTTGATGACGTGCAAATCACCAATGCAGTTATGGACATGTATGCAAAATGTGGGAGCATGAGAAATGCTTATATGGTTTTCAATAAGATGAGGAATAAGGATGTTGCATCCTGGAACATCATGATCATGGGTTATGGCATGCACGGATATGGCAGTAAGGCGTTGGATATGTTCTCTGATATGTGCAAAGTACAAATGAAGCTTGATGAGGTTACATTTGTTGGGGTTTTGTCTGCGTGCAGCCATACAGGTTTAGTCAGAGAAGGGCGTGAATTCTTGAGACAAATGAAGTCGAAGTATGGCGTGGTTCCAACCATCGAGCATTATACTTGTGTGGTTGACATGCTTGGTCGAGCTGGGCATCTTGAGGAGGCATATCAACTGGTGCTAGAAATGCCTATCGAGACCAATCCTGTGCTGTGGAGGGCATTGCTAGCAGCATGTCGACTTCATGGGAACCAGGATATCGCAGAGGTCGCTGTGCATAAGGTGATTGAACTTGATCCAGGTCACTGTGGTAATTATGTGCTGATGTCCAATCTTTATGTAGCGAATGGTCAATATGATGAGGTAACAGAAGTTAGACATTCAATGAGCCAGCAGAATGTGAAGAAGATACCGGGCTGTAGCTGGATTGAGCTGAAGGATGGTGTGCATGCTTTTATTACTGGTGATAGAGCCCATCCTAAAGCTAACTTTATTTATGCCGAATTAGACTCATTGACTGCTCGTCTTGGTGAGCTCGGATATGTGCCTCATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

628

Amino Acids

69.64

Weight (kDa)

6.52

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	102 - 149	9e-10	PPR repeat family
PPR_2	PF13041	199 - 244	2.2e-08	PPR repeat family
PPR	PF01535	202 - 232	8.6e-07	PPR repeat
PPR_2	PF13041	300 - 348	3.6e-08	PPR repeat family
PPR_2	PF13041	406 - 454	2e-09	PPR repeat family
PPR	PF01535	410 - 436	5.7e-06	PPR repeat
E_motif	PF20431	524 - 586	1.1e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14730
malus_domestica	MD05G1289700.v1.1
prunus_persica	Prupe.4G076000_v2.0.a1
pyrus_communis	pycom05g26680
rosa_chinensis	RchiOBHm_Chr7g0219901
rosa_laevigata	RLG00000009523 RLG00000031996
rosa_multiflora	Rmu_sc0004521.1_g000007
rosa_roxburghii	Rroxscaffold_1G00063400
rosa_rugosa	Rorug05G0007900
rosa_samantha	Rh4BG067800 Rh4CG075700 Rh5AG101900 Rh5AG102300 Rh5BG098600 Rh5CG110800 Rh5DG097900
rosa_wichuraiana	Rw5G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	636
AccBSI	CCGCTC	1 cut(s)	770
AccI	GTMKAC	1 cut(s)	1564
AciI	CCGC	9 cut(s)	72, 98, 142, 145, 388, 447, 665, 770, 945
AclWI	GGATC	1 cut(s)	1616
AcsI	RAATTY	3 cut(s)	488, 1074, 1391
AcuI	CTGAAG	1 cut(s)	1781
AcyI	GRCGYC	2 cut(s)	267, 867
AdeI	CACNNNGTG	1 cut(s)	307
AfaI	GTAC	2 cut(s)	242, 1311
AfiI	CCNNNNNNNGG	2 cut(s)	78, 720
AflIII	ACRYGT	3 cut(s)	237, 837, 1155
AgsI	TTSAA	8 cut(s)	131, 283, 544, 823, 874, 1201, 1616, 1710
AhdI	GACNNNNNGTC	1 cut(s)	1848
AjiI	CACGTC	1 cut(s)	1129
AjnI	CCWGG	3 cut(s)	1229, 1578, 1624
AjuI	GAANNNNNNNTTGG	2 cut(s)	479, 511
AluBI	AGCT	8 cut(s)	54, 122, 1321, 1475, 1749, 1759, 1811, 1861
AluI	AGCT	8 cut(s)	54, 122, 1321, 1475, 1749, 1759, 1811, 1861
Alw21I	GWGCWC	3 cut(s)	526, 1045, 1863
Alw26I	GTCTC	3 cut(s)	858, 1393, 1517
AlwI	GGATC	1 cut(s)	1616
ApeKI	GCWGC	7 cut(s)	74, 110, 444, 646, 1052, 1359, 1556
ApoI	RAATTY	3 cut(s)	488, 1074, 1391
AspLEI	GCGC	3 cut(s)	48, 140, 637
AsuC2I	CCSGG	2 cut(s)	79, 1740
AsuHPI	GGTGA	8 cut(s)	496, 541, 695, 959, 1129, 1621, 1802, 1868
AsuNHI	GCTAGC	1 cut(s)	1552
BanII	GRGCYC	2 cut(s)	1801, 1863
Bbv12I	GWGCWC	3 cut(s)	526, 1045, 1863
BbvCI	CCTCAGC	1 cut(s)	50
BbvI	GCAGC	7 cut(s)	61, 97, 456, 633, 1064, 1371, 1568
BceAI	ACGGC	1 cut(s)	254
BcgI	CGANNNNNNTGC	2 cut(s)	92, 126
BciT130I	CCWGG	3 cut(s)	1231, 1580, 1626
BclI	TGATCA	2 cut(s)	949, 1242
BcnI	CCSGG	2 cut(s)	79, 1740
BcoDI	GTCTC	3 cut(s)	858, 1393, 1517
BfaI	CTAG	3 cut(s)	1508, 1553, 1882
BfmI	CTRYAG	1 cut(s)	1744
BisI	GCNGC	9 cut(s)	75, 98, 111, 145, 445, 647, 1053, 1360, 1557
BlsI	GCNGC	9 cut(s)	76, 99, 112, 146, 446, 648, 1054, 1361, 1558
Bme1390I	CCNGG	5 cut(s)	79, 1231, 1580, 1626, 1740
BmeRI	GACNNNNNGTC	1 cut(s)	1848
BmgBI	CACGTC	1 cut(s)	1129
BmiI	GGNNCC	3 cut(s)	29, 1428, 1577
BmrFI	CCNGG	5 cut(s)	79, 1231, 1580, 1626, 1740
BmrI	ACTGGG	1 cut(s)	729
BmsI	GCATC	3 cut(s)	1050, 1235, 1489
BmtI	GCTAGC	1 cut(s)	1556
BmuI	ACTGGG	1 cut(s)	729
BoxI	GACNNNNGTC	1 cut(s)	722
BpmI	CTGGAG	1 cut(s)	476
Bpu10I	CCTNAGC	1 cut(s)	50
BpuEI	CTTGAG	3 cut(s)	671, 1417, 1505
BpuMI	CCSGG	2 cut(s)	79, 1740
BsaAI	YACGTR	1 cut(s)	537
BsaHI	GRCGYC	2 cut(s)	267, 867
BsaI	GGTCTC	1 cut(s)	1517
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	2 cut(s)	78, 720
Bse118I	RCCGGY	1 cut(s)	395
Bse1I	ACTGG	4 cut(s)	724, 1034, 1506, 1792
Bse3DI	GCAATG	4 cut(s)	327, 624, 940, 1547
BseBI	CCWGG	3 cut(s)	1231, 1580, 1626
BseGI	GGATG	6 cut(s)	511, 1117, 1225, 1226, 1771, 1801
BseLI	CCNNNNNNNGG	2 cut(s)	78, 720
BseMI	GCAATG	4 cut(s)	327, 624, 940, 1547
BseMII	CTCAG	4 cut(s)	64, 104, 169, 956
BseNI	ACTGG	4 cut(s)	724, 1034, 1506, 1792
BseRI	GAGGAG	4 cut(s)	46, 575, 668, 1502
BseXI	GCAGC	7 cut(s)	61, 97, 456, 633, 1064, 1371, 1568
BseYI	CCCAGC	2 cut(s)	332, 1475
BsgI	GTGCAG	1 cut(s)	1378
Bsh1285I	CGRYCG	1 cut(s)	83
BsiEI	CGRYCG	1 cut(s)	83
BsiHKAI	GWGCWC	3 cut(s)	526, 1045, 1863
BsiSI	CCGG	4 cut(s)	79, 396, 407, 1739
BslFI	GGGAC	1 cut(s)	973
BslI	CCNNNNNNNGG	2 cut(s)	78, 720
BsmAI	GTCTC	3 cut(s)	858, 1393, 1517
BsmBI	CGTCTC	1 cut(s)	858
BsmFI	GGGAC	1 cut(s)	973
BsmI	GAATGC	3 cut(s)	390, 619, 829
Bso31I	GGTCTC	1 cut(s)	1517
Bsp1286I	GDGCHC	4 cut(s)	526, 1045, 1801, 1863
Bsp143I	GATC	3 cut(s)	949, 1242, 1621
BspACI	CCGC	9 cut(s)	72, 98, 142, 145, 388, 447, 665, 770, 945
BspCNI	CTCAG	4 cut(s)	63, 103, 168, 957
BspHI	TCATGA	1 cut(s)	1239
BspLI	GGNNCC	3 cut(s)	29, 1428, 1577
BspOI	GCTAGC	1 cut(s)	1556
BspPI	GGATC	1 cut(s)	1616
BspTNI	GGTCTC	1 cut(s)	1517
BsrBI	CCGCTC	1 cut(s)	770
BsrDI	GCAATG	4 cut(s)	327, 624, 940, 1547
BsrFI	RCCGGY	1 cut(s)	395
BsrI	ACTGG	4 cut(s)	724, 1034, 1506, 1792
BssAI	RCCGGY	1 cut(s)	395
BssMI	GATC	3 cut(s)	949, 1242, 1621
BssNI	GRCGYC	2 cut(s)	267, 867
Bst2UI	CCWGG	3 cut(s)	1231, 1580, 1626
Bst4CI	ACNGT	3 cut(s)	715, 1027, 1634
BstACI	GRCGYC	2 cut(s)	267, 867
BstBAI	YACGTR	1 cut(s)	537
BstDEI	CTNAG	4 cut(s)	50, 90, 155, 965
BstEII	GGTNACC	1 cut(s)	1012
BstF5I	GGATG	6 cut(s)	511, 1117, 1225, 1226, 1771, 1801
BstHHI	GCGC	3 cut(s)	48, 140, 637
BstKTI	GATC	3 cut(s)	952, 1245, 1624
BstMAI	GTCTC	3 cut(s)	858, 1393, 1517
BstMBI	GATC	3 cut(s)	949, 1242, 1621
BstMCI	CGRYCG	1 cut(s)	83
BstMWI	GCNNNNNNNGC	9 cut(s)	119, 144, 320, 329, 643, 1049, 1513, 1553, 1595
BstNI	CCWGG	3 cut(s)	1231, 1580, 1626
BstNSI	RCATGY	8 cut(s)	138, 241, 841, 1159, 1261, 1465, 1563, 1778
BstPAI	GACNNNNGTC	1 cut(s)	722
BstPI	GGTNACC	1 cut(s)	1012
BstSCI	CCNGG	5 cut(s)	77, 1229, 1578, 1624, 1738
BstSFI	CTRYAG	1 cut(s)	1744
BstSNI	TACGTA	1 cut(s)	537
BstV1I	GCAGC	7 cut(s)	61, 97, 456, 633, 1064, 1371, 1568
BtrI	CACGTC	1 cut(s)	1129
BtsCI	GGATG	6 cut(s)	511, 1117, 1225, 1226, 1771, 1801
BtsI	GCAGTG	2 cut(s)	526, 936
BtsIMutI	CAGTG	4 cut(s)	526, 936, 1041, 1630
CciI	TCATGA	1 cut(s)	1239
CfoI	GCGC	3 cut(s)	48, 140, 637
Cfr10I	RCCGGY	1 cut(s)	395
CseI	GACGC	2 cut(s)	275, 875
Csp6I	GTAC	2 cut(s)	241, 1310
CviQI	GTAC	2 cut(s)	241, 1310
DdeI	CTNAG	4 cut(s)	50, 90, 155, 965
DpnI	GATC	3 cut(s)	951, 1244, 1623
DpnII	GATC	3 cut(s)	949, 1242, 1621
DraIII	CACNNNGTG	1 cut(s)	307
DriI	GACNNNNNGTC	1 cut(s)	1848
Eam1105I	GACNNNNNGTC	1 cut(s)	1848
Ecl136II	GAGCTC	1 cut(s)	1861
Eco105I	TACGTA	1 cut(s)	537
Eco24I	GRGCYC	2 cut(s)	1801, 1863
Eco31I	GGTCTC	1 cut(s)	1517
Eco32I	GATATC	1 cut(s)	1585
Eco53kI	GAGCTC	1 cut(s)	1861
Eco57I	CTGAAG	1 cut(s)	1781
Eco91I	GGTNACC	1 cut(s)	1012
EcoICRI	GAGCTC	1 cut(s)	1861
EcoO65I	GGTNACC	1 cut(s)	1012
EcoRI	GAATTC	1 cut(s)	1391
EcoRII	CCWGG	3 cut(s)	1229, 1578, 1624
EcoRV	GATATC	1 cut(s)	1585
EcoT22I	ATGCAT	1 cut(s)	1065
EcoT38I	GRGCYC	2 cut(s)	1801, 1863
Esp3I	CGTCTC	1 cut(s)	858
FaqI	GGGAC	1 cut(s)	973
FauI	CCCGC	2 cut(s)	149, 440
FbaI	TGATCA	2 cut(s)	949, 1242
FblI	GTMKAC	1 cut(s)	1564
Fnu4HI	GCNGC	9 cut(s)	75, 98, 111, 145, 445, 647, 1053, 1360, 1557
FokI	GGATG	6 cut(s)	518, 1124, 1213, 1232, 1778, 1788
FriOI	GRGCYC	2 cut(s)	1801, 1863
Fsp4HI	GCNGC	9 cut(s)	75, 98, 111, 145, 445, 647, 1053, 1360, 1557
FspBI	CTAG	3 cut(s)	1508, 1553, 1882
FspI	TGCGCA	1 cut(s)	636
GlaI	GCGC	3 cut(s)	47, 139, 636
GluI	GCNGC	9 cut(s)	75, 98, 111, 145, 445, 647, 1053, 1360, 1557
GsaI	CCCAGC	2 cut(s)	336, 1479
GsuI	CTGGAG	1 cut(s)	476
HapII	CCGG	4 cut(s)	79, 396, 407, 1739
HgaI	GACGC	2 cut(s)	275, 875
HhaI	GCGC	3 cut(s)	48, 140, 637
Hin1I	GRCGYC	2 cut(s)	267, 867
Hin6I	GCGC	3 cut(s)	46, 138, 635
HinP1I	GCGC	3 cut(s)	46, 138, 635
HincII	GTYRAC	2 cut(s)	1459, 1565
HindII	GTYRAC	2 cut(s)	1459, 1565
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	5 cut(s)	151, 469, 803, 961, 1835
HpaII	CCGG	4 cut(s)	79, 396, 407, 1739
HphI	GGTGA	8 cut(s)	496, 541, 695, 959, 1129, 1621, 1802, 1868
Hpy166II	GTNNAC	5 cut(s)	175, 417, 711, 1459, 1565
Hpy188I	TCNGA	5 cut(s)	158, 966, 1297, 1379, 1865
Hpy188III	TCNNGA	9 cut(s)	25, 455, 953, 1004, 1021, 1240, 1396, 1484, 1522
Hpy8I	GTNNAC	5 cut(s)	175, 417, 711, 1459, 1565
Hpy99I	CGWCG	2 cut(s)	269, 790
HpyAV	CCTTC	8 cut(s)	70, 137, 683, 892, 1040, 1102, 1376, 1756
HpyCH4III	ACNGT	3 cut(s)	715, 1027, 1634
HpyCH4IV	ACGT	3 cut(s)	419, 536, 1128
HpyF10VI	GCNNNNNNNGC	9 cut(s)	119, 144, 320, 329, 643, 1049, 1513, 1553, 1595
HpyF3I	CTNAG	4 cut(s)	50, 90, 155, 965
HpySE526I	ACGT	3 cut(s)	419, 536, 1128
Hsp92I	GRCGYC	2 cut(s)	267, 867
HspAI	GCGC	3 cut(s)	46, 138, 635
Ksp22I	TGATCA	2 cut(s)	949, 1242
Kzo9I	GATC	3 cut(s)	949, 1242, 1621
LmnI	GCTCC	2 cut(s)	59, 1173
Lsp1109I	GCAGC	7 cut(s)	61, 97, 456, 633, 1064, 1371, 1568
LweI	GCATC	3 cut(s)	1050, 1235, 1489
MaeI	CTAG	3 cut(s)	1508, 1553, 1882
MaeII	ACGT	3 cut(s)	419, 536, 1128
MaeIII	GTNAC	5 cut(s)	715, 1012, 1330, 1628, 1690
MalI	GATC	3 cut(s)	951, 1244, 1623
MbiI	CCGCTC	1 cut(s)	770
MboI	GATC	3 cut(s)	949, 1242, 1621
MboII	GAAGA	6 cut(s)	393, 478, 886, 992, 1741, 1744
MhlI	GDGCHC	4 cut(s)	526, 1045, 1801, 1863
MlyI	GAGTC	2 cut(s)	955, 1829
MmeI	TCCRAC	6 cut(s)	477, 483, 841, 1083, 1263, 1454
Mph1103I	ATGCAT	1 cut(s)	1065
MseI	TTAA	3 cut(s)	624, 986, 1092
MslI	CAYNNNNRTG	3 cut(s)	945, 1244, 1266
MspA1I	CMGCKG	2 cut(s)	74, 447
MspI	CCGG	4 cut(s)	79, 396, 407, 1739
MspR9I	CCNGG	5 cut(s)	79, 1231, 1580, 1626, 1740
Mva1269I	GAATGC	3 cut(s)	390, 619, 829
MvaI	CCWGG	3 cut(s)	1231, 1580, 1626
MwoI	GCNNNNNNNGC	9 cut(s)	119, 144, 320, 329, 643, 1049, 1513, 1553, 1595
NciI	CCSGG	2 cut(s)	79, 1740
NdeII	GATC	3 cut(s)	949, 1242, 1621
NheI	GCTAGC	1 cut(s)	1552
NlaIV	GGNNCC	3 cut(s)	29, 1428, 1577
NmeAIII	GCCGAG	1 cut(s)	726
NmuCI	GTSAC	2 cut(s)	715, 1628
NsbI	TGCGCA	1 cut(s)	636
NsiI	ATGCAT	1 cut(s)	1065
NspI	RCATGY	8 cut(s)	138, 241, 841, 1159, 1261, 1465, 1563, 1778
PaeI	GCATGC	3 cut(s)	138, 1261, 1778
PagI	TCATGA	1 cut(s)	1239
PciI	ACATGT	3 cut(s)	237, 837, 1155
PctI	GAATGC	3 cut(s)	390, 619, 829
PfeI	GAWTC	3 cut(s)	151, 469, 803
PfoI	TCCNGGA	1 cut(s)	1229
PkrI	GCNGC	9 cut(s)	76, 99, 112, 146, 446, 648, 1054, 1361, 1558
PleI	GAGTC	2 cut(s)	955, 1829
PpsI	GAGTC	2 cut(s)	955, 1829
Ppu21I	YACGTR	1 cut(s)	537
PscI	ACATGT	3 cut(s)	237, 837, 1155
PshAI	GACNNNNGTC	1 cut(s)	722
Psp124BI	GAGCTC	1 cut(s)	1863
Psp6I	CCWGG	3 cut(s)	1229, 1578, 1624
PspEI	GGTNACC	1 cut(s)	1012
PspFI	CCCAGC	2 cut(s)	332, 1475
PspGI	CCWGG	3 cut(s)	1229, 1578, 1624
PspN4I	GGNNCC	3 cut(s)	29, 1428, 1577
RsaI	GTAC	2 cut(s)	242, 1311
RsaNI	GTAC	2 cut(s)	241, 1310
RseI	CAYNNNNRTG	3 cut(s)	945, 1244, 1266
SacI	GAGCTC	1 cut(s)	1863
SalI	GTCGAC	1 cut(s)	1563
SaqAI	TTAA	3 cut(s)	624, 986, 1092
SatI	GCNGC	9 cut(s)	75, 98, 111, 145, 445, 647, 1053, 1360, 1557
Sau3AI	GATC	3 cut(s)	949, 1242, 1621
SchI	GAGTC	2 cut(s)	955, 1829
ScrFI	CCNGG	5 cut(s)	79, 1231, 1580, 1626, 1740
SduI	GDGCHC	4 cut(s)	526, 1045, 1801, 1863
SfaNI	GCATC	3 cut(s)	1050, 1235, 1489
SfcI	CTRYAG	1 cut(s)	1744
SmiMI	CAYNNNNRTG	3 cut(s)	945, 1244, 1266
SmlI	CTYRAG	3 cut(s)	650, 1396, 1484
SmoI	CTYRAG	3 cut(s)	650, 1396, 1484
SnaBI	TACGTA	1 cut(s)	537
SphI	GCATGC	3 cut(s)	138, 1261, 1778
SsiI	CCGC	9 cut(s)	72, 98, 142, 145, 388, 447, 665, 770, 945
SspMI	CTAG	3 cut(s)	1508, 1553, 1882
SstI	GAGCTC	1 cut(s)	1863
StyD4I	CCNGG	5 cut(s)	77, 1229, 1578, 1624, 1738
TaaI	ACNGT	3 cut(s)	715, 1027, 1634
TaiI	ACGT	3 cut(s)	422, 539, 1131
TaqI	TCGA	7 cut(s)	275, 369, 1412, 1437, 1471, 1521, 1564
TatI	WGTACW	2 cut(s)	240, 1309
TauI	GCSGC	2 cut(s)	100, 147
TfiI	GAWTC	3 cut(s)	151, 469, 803
Tru1I	TTAA	3 cut(s)	624, 986, 1092
Tru9I	TTAA	3 cut(s)	624, 986, 1092
TscAI	CASTG	4 cut(s)	526, 936, 1041, 1637
TseFI	GTSAC	2 cut(s)	715, 1628
TseI	GCWGC	7 cut(s)	74, 110, 444, 646, 1052, 1359, 1556
Tsp45I	GTSAC	2 cut(s)	715, 1628
TspDTI	ATGAA	6 cut(s)	17, 461, 1067, 1331, 1421, 1559
TspGWI	ACGGA	3 cut(s)	194, 414, 1278
TspRI	CASTG	4 cut(s)	526, 936, 1041, 1637
XapI	RAATTY	3 cut(s)	488, 1074, 1391
XceI	RCATGY	8 cut(s)	138, 241, 841, 1159, 1261, 1465, 1563, 1778
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1147
XmiI	GTMKAC	1 cut(s)	1564
XspI	CTAG	3 cut(s)	1508, 1553, 1882
Zsp2I	ATGCAT	1 cut(s)	1065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.