Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0013080

Physical Location & Seq

Genomic Coordinates Reverse (-)

9599314 .. 9601203

Gene Structure 1890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G008930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAATAGAACCACCAACTTCCTCAAGAAACCTTCCTTCTCTTTGTGTTTCAGCTACCCTTTTTCACATTCCGCTACCCAACCTGTTCACTCTGTGTATGACCTCAGCACCTGCATAGCCTCATTGCAAGCATCTGCTCGCTACAAGAGCCTCAGAAAAGGCAAGCAAATCCATGCCTATATGCTCACGAATGGCTTCCTTTTCTCCCCTCAATCCATAACCAGCCTCATCAACATGTACTCCAAGTGCAACCAAATGGGTGATGCCGTCTCTACCTTTTACTATAAGTTCCATGATCACAATGTGTTTGCTTACAATGCAGTCATTGCTGGGTTCACTGCAAATGGGTTGGCTAGAAATGGATTTGAATTCTATAAAAGAATGCGGTTGGCAGGTGTTGTGCCAGATAAGTTTACGTTTCCATGTGCTATCAGAGCTTGTTGTGGGGTAGTGGAGGTTTTGAAGGTTCATGCCTTGGTGGTTAAACTTGGGTTGGAATTAGATGTATATGTTGGTAGTGCTTTGGTGAATACATATTTGAAATTTGTGTTAGTGGAGGAGGCGCAGAAAGTGTTTGAGGAGTTGCCTTCTAGAGATGTTGTGCTTTGGAATGCAATGGTTAATGGGTTTGCACAGATTGGACGTTTTGATGAGGCTTTGGTTGTCTTTAGGATAATGGGTGAGGAAGGGGTTGTGCCTAGTAGATTTACGGTAACTGGGGTCTTGTCAATCTTCGCCATGACGGGAGATTTTGACAATGGGAGAGCAGTGCATGGGTTTGCATTGAAATTGGGGTATGATTCACATTTTGAGGTTTCAAATGCATTGATCGACATGTATGGAAAATGCAAGTTTACAGAAGATGCATTAGATATTTTTGAGATGATAATTGACAAGGATATATATTCTTGGAACTCAATTATAGCAGTGCATGAACAGTGTGGTTATCATGATGAAACTCTCAAGCTTTTGTACAGAATGCTAGGTGCTGGGGTTCTACCTGATCTGGTGACCATCACGATAGTTGTTCCGGCCTGCTCTCATCTAGCAGCGTTGATGTATGGTAGAGAAATCCATGGGTATATGATTAAAAATGAGATTGGGAAGGATGTGAATAAGGAAGATGTTAATGATGTGCAAATGACCAATGCGATCATGGACATGTACACAAAATGTGGGAGCATGAGAAATGCTTATATGGTTTTTGATAAGATGAAAAATAAGGACGTAGCGTCATGGAACATCATGATCATGGGTTATGGCATGCACGGAAATGCTAATGAGGCATTAGATATGTTTTCTCGCATGTGTGAGGCACAGATTGAGGTTGATGAGGTCACATTTGTTGGGGTTTTGTCTGCGTGCAGCCATGCAGGGTTAGTGAGTGAAGGGCGTGAATTATTGAGACAAATGAAGTCAAAATATGGTGTAATTCCAACCATTGAGCATTATACCTGTGTGGTTGACATGCTTGGTCGAGCTGGACATGTGGAGGAGGCATTTGAATTGGTGCAAAACATGCCTATTCAGGCCAATCCTGTGGTGTGGAGGGCATTGTTAGCAGCATGTCGACTCCATAGAAATTCGGATATTGCAAAAGTTGCTGCACAGAAGCTAATGGAACTTGACCCAGGGCACTCTGGTAATTATGTGTTAACGTCCAATATTTTTGTAGATATTGGTCAATATGAAGAGGTATCAGAAGTTAGACATACAATGAGGCAACATAATATCAAGAAGGCACCAGGCTGTAGCTGGACTGAGTTGAAGGATGGTGTGCATGCTTTTATCAATGGTGATAGGGCCCATCCTAAAGCCAACTTTATTTATGCTGAATTGGACTCCTTGACAGCTCGACTTCATGAGCATGGATATGTACCCCAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

629

Amino Acids

70.48

Weight (kDa)

6.32

Isoelectric Point (pI)

33.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	101 - 148	3.5e-09	PPR repeat family
PPR_2	PF13041	198 - 243	1.6e-08	PPR repeat family
PPR	PF01535	201 - 231	3.3e-06	PPR repeat
PPR_2	PF13041	299 - 347	2.5e-06	PPR repeat family
PPR_2	PF13041	408 - 456	6.2e-10	PPR repeat family
PPR	PF01535	412 - 439	5.6e-07	PPR repeat
E_motif	PF20431	526 - 588	4.7e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14730
malus_domestica	MD05G1289700.v1.1
prunus_persica	Prupe.4G076000_v2.0.a1
pyrus_communis	pycom05g26680
rosa_chinensis	RchiOBHm_Chr7g0219901
rosa_laevigata	RLG00000009523 RLG00000031996
rosa_multiflora	Rmu_sc0004521.1_g000007
rosa_roxburghii	Rroxscaffold_1G00063400
rosa_rugosa	Rorug05G0007900
rosa_samantha	Rh4BG067800 Rh4CG075700 Rh5AG101900 Rh5AG102300 Rh5BG098600 Rh5CG110800 Rh5DG097900
rosa_wichuraiana	Rw5G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	119, 383
Acc36I	ACCTGC	2 cut(s)	119, 383
AccB1I	GGYRCC	1 cut(s)	1741
AccI	GTMKAC	1 cut(s)	1570
AciI	CCGC	2 cut(s)	72, 385
AcsI	RAATTY	3 cut(s)	368, 542, 1582
AdeI	CACNNNGTG	2 cut(s)	94, 304
AfaI	GTAC	4 cut(s)	239, 974, 1166, 1878
AflIII	ACRYGT	4 cut(s)	234, 834, 1161, 1486
AgsI	TTSAA	7 cut(s)	368, 463, 541, 787, 819, 1505, 1768
AhdI	GACNNNNNGTC	1 cut(s)	1231
AjnI	CCWGG	2 cut(s)	1630, 1744
AluBI	AGCT	8 cut(s)	54, 437, 967, 1481, 1615, 1755, 1853, 1885
AluI	AGCT	8 cut(s)	54, 437, 967, 1481, 1615, 1755, 1853, 1885
Alw26I	GTCTC	2 cut(s)	274, 1399
AlwNI	CAGNNNCTG	1 cut(s)	111
AoxI	GGCC	3 cut(s)	1032, 1530, 1803
ApaI	GGGCCC	1 cut(s)	1807
ApeKI	GCWGC	4 cut(s)	1049, 1365, 1562, 1604
ApoI	RAATTY	3 cut(s)	368, 542, 1582
Asp700I	GAANNNNTTC	1 cut(s)	194
AspLEI	GCGC	1 cut(s)	565
AspS9I	GGNCC	2 cut(s)	1803, 1804
AsuHPI	GGTGA	5 cut(s)	272, 538, 692, 1021, 1808
BaeGI	GKGCMC	2 cut(s)	1638, 1807
BanI	GGYRCC	1 cut(s)	1741
BanII	GRGCYC	1 cut(s)	1807
BbvCI	CCTCAGC	1 cut(s)	104
BbvI	GCAGC	4 cut(s)	1061, 1377, 1574, 1591
BccI	CCATC	3 cut(s)	1022, 1766, 1815
BceAI	ACGGC	1 cut(s)	251
BciT130I	CCWGG	2 cut(s)	1632, 1746
BclI	TGATCA	2 cut(s)	295, 1248
BcoDI	GTCTC	2 cut(s)	274, 1399
BfaI	CTAG	6 cut(s)	354, 591, 699, 983, 1046, 1888
BfmI	CTRYAG	1 cut(s)	1750
BfuAI	ACCTGC	2 cut(s)	119, 383
BisI	GCNGC	4 cut(s)	1050, 1366, 1563, 1605
BlsI	GCNGC	4 cut(s)	1051, 1367, 1564, 1606
Bme1390I	CCNGG	2 cut(s)	1632, 1746
BmeRI	GACNNNNNGTC	1 cut(s)	1231
BmgT120I	GGNCC	2 cut(s)	1803, 1804
BmiI	GGNNCC	2 cut(s)	1743, 1805
BmrFI	CCNGG	2 cut(s)	1632, 1746
BmrI	ACTGGG	1 cut(s)	726
BmsI	GCATC	3 cut(s)	140, 253, 853
BmuI	ACTGGG	1 cut(s)	726
Bpu10I	CCTNAGC	1 cut(s)	104
BpuEI	CTTGAG	2 cut(s)	8, 947
BsaJI	CCNNGG	4 cut(s)	474, 1075, 1630, 1631
BsaXI	ACNNNNNCTCC	2 cut(s)	224, 254
Bse1I	ACTGG	1 cut(s)	721
Bse3DI	GCAATG	3 cut(s)	122, 324, 621
BseBI	CCWGG	2 cut(s)	1632, 1746
BseDI	CCNNGG	4 cut(s)	474, 1075, 1630, 1631
BseGI	GGATG	3 cut(s)	1114, 1777, 1807
BseMI	GCAATG	3 cut(s)	122, 324, 621
BseMII	CTCAG	3 cut(s)	118, 166, 1752
BseNI	ACTGG	1 cut(s)	721
BseRI	GAGGAG	3 cut(s)	572, 593, 1508
BseSI	GKGCMC	2 cut(s)	1638, 1807
BseXI	GCAGC	4 cut(s)	1061, 1377, 1574, 1591
BseYI	CCCAGC	3 cut(s)	329, 989, 1881
BsgI	GTGCAG	2 cut(s)	1384, 1590
BshFI	GGCC	3 cut(s)	1034, 1532, 1805
BshNI	GGYRCC	1 cut(s)	1741
BsiSI	CCGG	1 cut(s)	1031
BsmAI	GTCTC	2 cut(s)	274, 1399
BsmBI	CGTCTC	1 cut(s)	274
BsmI	GAATGC	3 cut(s)	387, 616, 984
BsnI	GGCC	3 cut(s)	1034, 1532, 1805
Bsp120I	GGGCCC	1 cut(s)	1803
Bsp1286I	GDGCHC	2 cut(s)	1638, 1807
Bsp1407I	TGTACA	2 cut(s)	972, 1164
Bsp143I	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
Bsp19I	CCATGG	1 cut(s)	1075
BspACI	CCGC	2 cut(s)	72, 385
BspANI	GGCC	3 cut(s)	1034, 1532, 1805
BspCNI	CTCAG	3 cut(s)	117, 165, 1753
BspHI	TCATGA	3 cut(s)	949, 1245, 1861
BspLI	GGNNCC	2 cut(s)	1743, 1805
BspMI	ACCTGC	2 cut(s)	119, 383
BspT107I	GGYRCC	1 cut(s)	1741
BsrDI	GCAATG	3 cut(s)	122, 324, 621
BsrGI	TGTACA	2 cut(s)	972, 1164
BsrI	ACTGG	1 cut(s)	721
BssECI	CCNNGG	4 cut(s)	474, 1075, 1630, 1631
BssMI	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
BssT1I	CCWWGG	2 cut(s)	474, 1075
Bst2UI	CCWGG	2 cut(s)	1632, 1746
Bst4CI	ACNGT	2 cut(s)	712, 939
Bst6I	CTCTTC	1 cut(s)	1686
BstAPI	GCANNNNNTGC	3 cut(s)	326, 1519, 1601
BstAUI	TGTACA	2 cut(s)	972, 1164
BstC8I	GCNNGC	7 cut(s)	129, 139, 164, 1036, 1265, 1363, 1782
BstDEI	CTNAG	3 cut(s)	104, 152, 1761
BstDSI	CCRYGG	1 cut(s)	1075
BstEII	GGTNACC	1 cut(s)	1009
BstF5I	GGATG	3 cut(s)	1114, 1777, 1807
BstHHI	GCGC	1 cut(s)	565
BstKTI	GATC	5 cut(s)	298, 831, 1006, 1155, 1251
BstMAI	GTCTC	2 cut(s)	274, 1399
BstMBI	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
BstMWI	GCNNNNNNNGC	8 cut(s)	147, 317, 326, 434, 1283, 1519, 1559, 1601
BstNI	CCWGG	2 cut(s)	1632, 1746
BstPI	GGTNACC	1 cut(s)	1009
BstSCI	CCNGG	2 cut(s)	1630, 1744
BstSFI	CTRYAG	1 cut(s)	1750
BstSLI	GKGCMC	2 cut(s)	1638, 1807
BstV1I	GCAGC	4 cut(s)	1061, 1377, 1574, 1591
BstXI	CCANNNNNNTGG	1 cut(s)	1540
BsuRI	GGCC	3 cut(s)	1034, 1532, 1805
BtgI	CCRYGG	1 cut(s)	1075
BtsCI	GGATG	3 cut(s)	1114, 1777, 1807
BtsI	GCAGTG	3 cut(s)	336, 774, 933
BtsIMutI	CAGTG	4 cut(s)	336, 774, 933, 944
BveI	ACCTGC	2 cut(s)	119, 383
Cac8I	GCNNGC	7 cut(s)	129, 139, 164, 1036, 1265, 1363, 1782
CaiI	CAGNNNCTG	1 cut(s)	111
CciI	TCATGA	3 cut(s)	949, 1245, 1861
CfoI	GCGC	1 cut(s)	565
Cfr13I	GGNCC	2 cut(s)	1803, 1804
CseI	GACGC	1 cut(s)	1221
Csp6I	GTAC	4 cut(s)	238, 973, 1165, 1877
CviQI	GTAC	4 cut(s)	238, 973, 1165, 1877
DdeI	CTNAG	3 cut(s)	104, 152, 1761
DpnI	GATC	5 cut(s)	297, 830, 1005, 1154, 1250
DpnII	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
DraIII	CACNNNGTG	2 cut(s)	94, 304
DriI	GACNNNNNGTC	1 cut(s)	1231
Eam1104I	CTCTTC	1 cut(s)	1686
Eam1105I	GACNNNNNGTC	1 cut(s)	1231
EarI	CTCTTC	1 cut(s)	1686
Eco130I	CCWWGG	2 cut(s)	474, 1075
Eco24I	GRGCYC	1 cut(s)	1807
Eco91I	GGTNACC	1 cut(s)	1009
EcoO109I	RGGNCCY	1 cut(s)	1803
EcoO65I	GGTNACC	1 cut(s)	1009
EcoRI	GAATTC	1 cut(s)	368
EcoRII	CCWGG	2 cut(s)	1630, 1744
EcoT14I	CCWWGG	2 cut(s)	474, 1075
EcoT22I	ATGCAT	2 cut(s)	826, 868
EcoT38I	GRGCYC	1 cut(s)	1807
ErhI	CCWWGG	2 cut(s)	474, 1075
Esp3I	CGTCTC	1 cut(s)	274
FbaI	TGATCA	2 cut(s)	295, 1248
FblI	GTMKAC	1 cut(s)	1570
Fnu4HI	GCNGC	4 cut(s)	1050, 1366, 1563, 1605
FokI	GGATG	3 cut(s)	1121, 1784, 1794
FriOI	GRGCYC	1 cut(s)	1807
Fsp4HI	GCNGC	4 cut(s)	1050, 1366, 1563, 1605
FspBI	CTAG	6 cut(s)	354, 591, 699, 983, 1046, 1888
GlaI	GCGC	1 cut(s)	564
GluI	GCNGC	4 cut(s)	1050, 1366, 1563, 1605
GsaI	CCCAGC	3 cut(s)	333, 993, 1885
HaeIII	GGCC	3 cut(s)	1034, 1532, 1805
HapII	CCGG	1 cut(s)	1031
HgaI	GACGC	1 cut(s)	1221
HhaI	GCGC	1 cut(s)	565
Hin6I	GCGC	1 cut(s)	563
HinP1I	GCGC	1 cut(s)	563
HincII	GTYRAC	3 cut(s)	1465, 1571, 1656
HindII	GTYRAC	3 cut(s)	1465, 1571, 1656
HindIII	AAGCTT	1 cut(s)	965
HinfI	GANTC	3 cut(s)	800, 1572, 1841
HpaI	GTTAAC	1 cut(s)	1656
HpaII	CCGG	1 cut(s)	1031
HphI	GGTGA	5 cut(s)	272, 538, 692, 1021, 1808
Hpy166II	GTNNAC	8 cut(s)	88, 336, 414, 855, 1167, 1465, 1571, 1656
Hpy188I	TCNGA	4 cut(s)	155, 434, 1588, 1702
Hpy188III	TCNNGA	8 cut(s)	25, 187, 591, 950, 1018, 1246, 1735, 1862
Hpy8I	GTNNAC	8 cut(s)	88, 336, 414, 855, 1167, 1465, 1571, 1656
HpyAV	CCTTC	9 cut(s)	42, 46, 457, 597, 680, 1099, 1382, 1732, 1762
HpyCH4III	ACNGT	2 cut(s)	712, 939
HpyCH4IV	ACGT	4 cut(s)	416, 643, 1227, 1658
HpyF10VI	GCNNNNNNNGC	8 cut(s)	147, 317, 326, 434, 1283, 1519, 1559, 1601
HpyF3I	CTNAG	3 cut(s)	104, 152, 1761
HpySE526I	ACGT	4 cut(s)	416, 643, 1227, 1658
HspAI	GCGC	1 cut(s)	563
Ksp22I	TGATCA	2 cut(s)	295, 1248
KspAI	GTTAAC	1 cut(s)	1656
Kzo9I	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
LmnI	GCTCC	1 cut(s)	1179
Lsp1109I	GCAGC	4 cut(s)	1061, 1377, 1574, 1591
LweI	GCATC	3 cut(s)	140, 253, 853
MaeI	CTAG	6 cut(s)	354, 591, 699, 983, 1046, 1888
MaeII	ACGT	4 cut(s)	416, 643, 1227, 1658
MaeIII	GTNAC	3 cut(s)	712, 1009, 1336
MalI	GATC	5 cut(s)	297, 830, 1005, 1154, 1250
MboI	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
MboII	GAAGA	4 cut(s)	724, 872, 1133, 1703
MhlI	GDGCHC	2 cut(s)	1638, 1807
MlyI	GAGTC	2 cut(s)	1566, 1835
MmeI	TCCRAC	2 cut(s)	474, 1460
Mph1103I	ATGCAT	2 cut(s)	826, 868
MroXI	GAANNNNTTC	1 cut(s)	194
MseI	TTAA	5 cut(s)	483, 621, 1089, 1128, 1655
MslI	CAYNNNNRTG	6 cut(s)	233, 1160, 1250, 1272, 1866, 1872
MspI	CCGG	1 cut(s)	1031
MspR9I	CCNGG	2 cut(s)	1632, 1746
Mva1269I	GAATGC	3 cut(s)	387, 616, 984
MvaI	CCWGG	2 cut(s)	1632, 1746
MwoI	GCNNNNNNNGC	8 cut(s)	147, 317, 326, 434, 1283, 1519, 1559, 1601
NcoI	CCATGG	1 cut(s)	1075
NdeII	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
NlaIV	GGNNCC	2 cut(s)	1743, 1805
NmuCI	GTSAC	2 cut(s)	1009, 1336
NsiI	ATGCAT	2 cut(s)	826, 868
PaeI	GCATGC	2 cut(s)	1267, 1784
PagI	TCATGA	3 cut(s)	949, 1245, 1861
PaqCI	CACCTGC	2 cut(s)	119, 383
PasI	CCCWGGG	1 cut(s)	1631
PciI	ACATGT	4 cut(s)	234, 834, 1161, 1486
PctI	GAATGC	3 cut(s)	387, 616, 984
PdmI	GAANNNNTTC	1 cut(s)	194
PfeI	GAWTC	1 cut(s)	800
PkrI	GCNGC	4 cut(s)	1051, 1367, 1564, 1606
PleI	GAGTC	2 cut(s)	1566, 1835
PpsI	GAGTC	2 cut(s)	1566, 1835
PscI	ACATGT	4 cut(s)	234, 834, 1161, 1486
Psp6I	CCWGG	2 cut(s)	1630, 1744
PspEI	GGTNACC	1 cut(s)	1009
PspFI	CCCAGC	3 cut(s)	329, 989, 1881
PspGI	CCWGG	2 cut(s)	1630, 1744
PspN4I	GGNNCC	2 cut(s)	1743, 1805
PspOMI	GGGCCC	1 cut(s)	1803
PspPI	GGNCC	2 cut(s)	1803, 1804
PstNI	CAGNNNCTG	1 cut(s)	111
RsaI	GTAC	4 cut(s)	239, 974, 1166, 1878
RsaNI	GTAC	4 cut(s)	238, 973, 1165, 1877
RseI	CAYNNNNRTG	6 cut(s)	233, 1160, 1250, 1272, 1866, 1872
SalI	GTCGAC	1 cut(s)	1569
SaqAI	TTAA	5 cut(s)	483, 621, 1089, 1128, 1655
SatI	GCNGC	4 cut(s)	1050, 1366, 1563, 1605
Sau3AI	GATC	5 cut(s)	295, 828, 1003, 1152, 1248
Sau96I	GGNCC	2 cut(s)	1803, 1804
SchI	GAGTC	2 cut(s)	1566, 1835
ScrFI	CCNGG	2 cut(s)	1632, 1746
SduI	GDGCHC	2 cut(s)	1638, 1807
SfaNI	GCATC	3 cut(s)	140, 253, 853
SfcI	CTRYAG	1 cut(s)	1750
SmiMI	CAYNNNNRTG	6 cut(s)	233, 1160, 1250, 1272, 1866, 1872
SmlI	CTYRAG	2 cut(s)	23, 962
SmoI	CTYRAG	2 cut(s)	23, 962
SphI	GCATGC	2 cut(s)	1267, 1784
SsiI	CCGC	2 cut(s)	72, 385
SspI	AATATT	1 cut(s)	1666
SspMI	CTAG	6 cut(s)	354, 591, 699, 983, 1046, 1888
StyD4I	CCNGG	2 cut(s)	1630, 1744
StyI	CCWWGG	2 cut(s)	474, 1075
TaaI	ACNGT	2 cut(s)	712, 939
TaiI	ACGT	4 cut(s)	419, 646, 1230, 1661
TaqI	TCGA	4 cut(s)	831, 1477, 1570, 1855
TatI	WGTACW	3 cut(s)	237, 972, 1164
TfiI	GAWTC	1 cut(s)	800
Tru1I	TTAA	5 cut(s)	483, 621, 1089, 1128, 1655
Tru9I	TTAA	5 cut(s)	483, 621, 1089, 1128, 1655
TscAI	CASTG	4 cut(s)	343, 774, 933, 944
TseFI	GTSAC	2 cut(s)	1009, 1336
TseI	GCWGC	4 cut(s)	1049, 1365, 1562, 1604
Tsp45I	GTSAC	2 cut(s)	1009, 1336
TspDTI	ATGAA	8 cut(s)	17, 458, 948, 969, 1229, 1427, 1704, 1850
TspGWI	ACGGA	1 cut(s)	1284
TspRI	CASTG	4 cut(s)	343, 774, 933, 944
XapI	RAATTY	3 cut(s)	368, 542, 1582
XbaI	TCTAGA	1 cut(s)	590
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1153, 1752
XmiI	GTMKAC	1 cut(s)	1570
XmnI	GAANNNNTTC	1 cut(s)	194
XspI	CTAG	6 cut(s)	354, 591, 699, 983, 1046, 1888
Zsp2I	ATGCAT	2 cut(s)	826, 868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.