Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0013080

Physical Location & Seq

Genomic Coordinates Forward (+)

468861 .. 472585

Gene Structure 3725 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0007900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGCAAACATCTCAACAACACCGAAGTACAGCTATCCACATGCTGCATCACCAACCTATGCAAGAGATTGATCCGTATTCTTCACCGCATTTCCAAATTTTAGAGAACAGTGTATGCCCAGATACTGGCAGCCAAGGCAAAAATGTTTCTTTTCAGACATACAAGGAAGAGTACTTTACCCTGGAATCAACCCCCGTCAATGATGGTTTTATAGCCTGTGATTCCCCTTCAGCTGTTAGTGGCTTGTCTAACCGGAGTCCTTTTTCACCACAAGGGTCTCACTCATACTCGTCTGATCATCATCATTTTTCTGACACCACGTCTGCATCACCGGTAAGTGGATGTTCCGGAGTTGATGATGGCAATGATTTGAAGTACAAGCTCAGGGAACTTGAAGTTTCACTGCTAGGGCCGGAATCAGATATTGTTGACAGCGGCTTTTGTTGTTACAAGAGTGACATGACGAGGTGGAACGAGAAACAAATTGCTGAAATGATACCCAAGCTGAACCTTAAGGATGTTCTCATTCGCTGTGCACAAGCAATATCAGAGGAGGATATGTACACAGCAGCGAATTGCATGGAAGTTTTGGGGCATAAGGTGTCGGTCTCTGGGGAGCCAATGCAAAGATTGGGCGCTTACATGTTGGAAGGTCTTAGAGCAAGGTTGGAAAGATCTGGTAGTATGATCTACAAAACCCTCAAATGCGAAGTACCTACAAGCGAGGAACTTATGACATACATGTCCATCCTCTATCGGATCTGCCCATACTGGAAGTTTGCTTACTTGTCTTCAAATGTTATCATTAGGGAAGCCTTGCTAAATGAACCTAGAGTCCACATCATCGATTTTCAGATTGCGCAGGGTACTCAATGGGTGCCTCTCATCCAGCATCTAGCATGTCAGCCTGGTGGGCCCCCGCTTATCCGAATCACAGGTGTTGATGATACCCAATCAAACCATGCGCGTGGTGGGGGACTTCATATTGTGGGCAAAAGGCTTTCAGAAGTGGCTGCAAAATACAATGTGCCATTCGAGTTCAATGCTGCTGCCATGTCCGGGTGTGAAGTTGAACTAGAAAATCTCAGGATTCAACCCGGAGAAGCCATAGCTGTTGCTTTTCCGTTCGTGTTGCACCACATGCCAGATGAGAGTGTAAGTACCGAAAATCACAGAGACCGTTTGCTACGGCTGGTTAGGAGTTTATCACCGAAAGTCATGACACTCGTTGAACAAGAATCGAACACCAATACTTCCTCCTTCTACTCAAGGTTTGTTGAGTCTGTAGATTATTATACAGCAATGTTTGAGTCGATTGATGCCGGTTGTCCAAGAGATGACAAGCAGCGGATCAGTGCTGAGATGCACTGTGTGGCTAGAGACATAGTGAACATGATTGCTTGCGAGGACACTGAGAGGGTGGAGCGGCATGAACTTCTTGGGAAGTGGAGGTCAAGGTTGATGATGGCCGGGTTTACTCCGTGGCCGTTTGGTCCGTCTGGGATCGGGGAGATTAGGAATATGTTGAAGGACTACAATGAGAATTACCGAGTTGAACAGTATGACGGTGCTCTCTACCTTGGTTGGAAGAAAAGAGCTATGGCAACCTCGTCCGCATGGAGGTGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

543

Amino Acids

61.14

Weight (kDa)

5.65

Isoelectric Point (pI)

49.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	171 - 541	4.9e-127	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14730
malus_domestica	MD05G1289700.v1.1
prunus_persica	Prupe.4G076000_v2.0.a1
pyrus_communis	pycom05g26680
rosa_chinensis	RchiOBHm_Chr7g0219901
rosa_laevigata	RLG00000009523 RLG00000031996
rosa_multiflora	Rmu_sc0004521.1_g000007
rosa_roxburghii	Rroxscaffold_1G00063400
rosa_rugosa	Rorug05G0007900
rosa_samantha	Rh4BG067800 Rh4CG075700 Rh5AG101900 Rh5AG102300 Rh5BG098600 Rh5CG110800 Rh5DG097900
rosa_wichuraiana	Rw5G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	742
Acc16I	TGCGCA	1 cut(s)	861
AccB1I	GGYRCC	1 cut(s)	877
AccB7I	CCANNNNNTGG	1 cut(s)	125
AccBSI	CCGCTC	1 cut(s)	1426
AccII	CGCG	1 cut(s)	967
AccIII	TCCGGA	1 cut(s)	347
AciI	CCGC	6 cut(s)	86, 435, 920, 1348, 1426, 1614
AclWI	GGATC	4 cut(s)	65, 767, 1358, 1511
AcoI	YGGCCR	2 cut(s)	1467, 1484
AcsI	RAATTY	1 cut(s)	96
AcuI	CTGAAG	1 cut(s)	213
AdeI	CACNNNGTG	1 cut(s)	1372
AfaI	GTAC	7 cut(s)	28, 173, 377, 563, 714, 868, 1162
AfiI	CCNNNNNNNGG	4 cut(s)	125, 338, 1059, 1620
AflII	CTTAAG	1 cut(s)	512
AflIII	ACRYGT	2 cut(s)	642, 741
AgeI	ACCGGT	1 cut(s)	331
AgsI	TTSAA	9 cut(s)	373, 395, 795, 1042, 1073, 1094, 1232, 1528, 1556
AhdI	GACNNNNNGTC	1 cut(s)	319
AjiI	CACGTC	1 cut(s)	321
AjnI	CCWGG	2 cut(s)	180, 907
AloI	GAACNNNNNNTCC	2 cut(s)	819, 851
AluBI	AGCT	6 cut(s)	32, 233, 382, 505, 1112, 1598
AluI	AGCT	6 cut(s)	32, 233, 382, 505, 1112, 1598
Alw21I	GWGCWC	2 cut(s)	538, 1573
Alw26I	GTCTC	4 cut(s)	282, 613, 1170, 1374
Alw44I	GTGCAC	1 cut(s)	534
AlwI	GGATC	4 cut(s)	65, 767, 1358, 1511
AlwNI	CAGNNNCTG	1 cut(s)	125
Aor13HI	TCCGGA	1 cut(s)	347
AoxI	GGCC	4 cut(s)	410, 914, 1467, 1484
ApaI	GGGCCC	1 cut(s)	918
ApaLI	GTGCAC	1 cut(s)	534
ApeKI	GCWGC	7 cut(s)	43, 129, 569, 1013, 1046, 1049, 1345
ApoI	RAATTY	1 cut(s)	96
AsiGI	ACCGGT	1 cut(s)	331
AspLEI	GCGC	3 cut(s)	638, 862, 967
AspS9I	GGNCC	4 cut(s)	410, 914, 915, 1493
AsuC2I	CCSGG	3 cut(s)	1060, 1098, 1471
AsuHPI	GGTGA	5 cut(s)	41, 75, 258, 321, 1200
AvaII	GGWCC	1 cut(s)	1493
BaeGI	GKGCMC	2 cut(s)	538, 918
BanI	GGYRCC	1 cut(s)	877
BanII	GRGCYC	1 cut(s)	918
BarI	GAAGNNNNNNTAC	2 cut(s)	767, 799
BbsI	GAAGAC	1 cut(s)	783
Bbv12I	GWGCWC	2 cut(s)	538, 1573
BbvI	GCAGC	7 cut(s)	30, 141, 581, 1000, 1033, 1036, 1357
BccI	CCATC	4 cut(s)	197, 353, 755, 1459
BceAI	ACGGC	2 cut(s)	1205, 1471
BcgI	CGANNNNNNTGC	2 cut(s)	1025, 1059
BciT130I	CCWGG	2 cut(s)	182, 909
BclI	TGATCA	1 cut(s)	295
BcnI	CCSGG	3 cut(s)	1060, 1098, 1471
BcoDI	GTCTC	4 cut(s)	282, 613, 1170, 1374
BfaI	CTAG	5 cut(s)	407, 831, 896, 1076, 1377
BfmI	CTRYAG	1 cut(s)	1284
BfoI	RGCGCY	1 cut(s)	639
BfrI	CTTAAG	1 cut(s)	512
BglI	GCCNNNNNGGC	1 cut(s)	913
BglII	AGATCT	1 cut(s)	674
BisI	GCNGC	9 cut(s)	44, 130, 436, 570, 1014, 1047, 1050, 1346, 1427
BlsI	GCNGC	9 cut(s)	45, 131, 437, 571, 1015, 1048, 1051, 1347, 1428
BmcAI	AGTACT	1 cut(s)	173
Bme1390I	CCNGG	5 cut(s)	182, 909, 1060, 1098, 1471
Bme18I	GGWCC	1 cut(s)	1493
BmeRI	GACNNNNNGTC	1 cut(s)	319
BmgBI	CACGTC	1 cut(s)	321
BmgT120I	GGNCC	4 cut(s)	410, 914, 915, 1493
BmiI	GGNNCC	4 cut(s)	618, 879, 916, 917
BmrFI	CCNGG	5 cut(s)	182, 909, 1060, 1098, 1471
BmsI	GCATC	5 cut(s)	55, 335, 901, 1309, 1353
BpiI	GAAGAC	1 cut(s)	783
Bpu10I	CCTNAGC	1 cut(s)	383
BpuEI	CTTGAG	1 cut(s)	1252
BpuMI	CCSGG	3 cut(s)	1060, 1098, 1471
Bsa29I	ATCGAT	1 cut(s)	846
BsaBI	GATNNNNATC	1 cut(s)	300
BsaI	GGTCTC	3 cut(s)	282, 613, 1170
BsaJI	CCNNGG	4 cut(s)	133, 180, 1481, 1579
BsaWI	WCCGGW	3 cut(s)	252, 331, 347
BsaXI	ACNNNNNCTCC	2 cut(s)	545, 575
Bsc4I	CCNNNNNNNGG	4 cut(s)	125, 338, 1059, 1620
Bse118I	RCCGGY	2 cut(s)	331, 1322
Bse1I	ACTGG	2 cut(s)	130, 776
Bse3DI	GCAATG	2 cut(s)	370, 1308
Bse8I	GATNNNNATC	1 cut(s)	300
BseAI	TCCGGA	1 cut(s)	347
BseBI	CCWGG	2 cut(s)	182, 909
BseCI	ATCGAT	1 cut(s)	846
BseDI	CCNNGG	4 cut(s)	133, 180, 1481, 1579
BseGI	GGATG	4 cut(s)	347, 523, 747, 885
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	4 cut(s)	125, 338, 1059, 1620
BseMI	GCAATG	2 cut(s)	370, 1308
BseMII	CTCAG	4 cut(s)	397, 1099, 1350, 1404
BseNI	ACTGG	2 cut(s)	130, 776
BseRI	GAGGAG	1 cut(s)	566
BseSI	GKGCMC	2 cut(s)	538, 918
BseXI	GCAGC	7 cut(s)	30, 141, 581, 1000, 1033, 1036, 1357
Bsh1236I	CGCG	1 cut(s)	967
BshFI	GGCC	4 cut(s)	412, 916, 1469, 1486
BshNI	GGYRCC	1 cut(s)	877
BshTI	ACCGGT	1 cut(s)	331
BshVI	ATCGAT	1 cut(s)	846
BsiHKAI	GWGCWC	2 cut(s)	538, 1573
BsiSI	CCGG	8 cut(s)	253, 332, 348, 413, 1059, 1098, 1323, 1470
BslFI	GGGAC	1 cut(s)	990
BslI	CCNNNNNNNGG	4 cut(s)	125, 338, 1059, 1620
BsmAI	GTCTC	4 cut(s)	282, 613, 1170, 1374
BsmFI	GGGAC	1 cut(s)	990
BsnI	GGCC	4 cut(s)	412, 916, 1469, 1486
Bso31I	GGTCTC	3 cut(s)	282, 613, 1170
Bsp120I	GGGCCC	1 cut(s)	914
Bsp1286I	GDGCHC	3 cut(s)	538, 918, 1573
Bsp13I	TCCGGA	1 cut(s)	347
Bsp1407I	TGTACA	1 cut(s)	561
Bsp143I	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
BspACI	CCGC	6 cut(s)	86, 435, 920, 1348, 1426, 1614
BspANI	GGCC	4 cut(s)	412, 916, 1469, 1486
BspCNI	CTCAG	4 cut(s)	396, 1098, 1351, 1405
BspDI	ATCGAT	1 cut(s)	846
BspEI	TCCGGA	1 cut(s)	347
BspFNI	CGCG	1 cut(s)	967
BspHI	TCATGA	1 cut(s)	1218
BspLI	GGNNCC	4 cut(s)	618, 879, 916, 917
BspPI	GGATC	4 cut(s)	65, 767, 1358, 1511
BspT107I	GGYRCC	1 cut(s)	877
BspTI	CTTAAG	1 cut(s)	512
BspTNI	GGTCTC	3 cut(s)	282, 613, 1170
BsrBI	CCGCTC	1 cut(s)	1426
BsrDI	GCAATG	2 cut(s)	370, 1308
BsrFI	RCCGGY	2 cut(s)	331, 1322
BsrGI	TGTACA	1 cut(s)	561
BsrI	ACTGG	2 cut(s)	130, 776
BssAI	RCCGGY	2 cut(s)	331, 1322
BssECI	CCNNGG	4 cut(s)	133, 180, 1481, 1579
BssMI	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
BssT1I	CCWWGG	2 cut(s)	133, 1579
Bst2UI	CCWGG	2 cut(s)	182, 909
Bst4CI	ACNGT	5 cut(s)	110, 1181, 1370, 1560, 1568
Bst6I	CTCTTC	1 cut(s)	162
BstAFI	CTTAAG	1 cut(s)	512
BstAPI	GCANNNNNTGC	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	561
BstC8I	GCNNGC	1 cut(s)	1402
BstDEI	CTNAG	5 cut(s)	383, 656, 1085, 1359, 1413
BstDSI	CCRYGG	1 cut(s)	1481
BstF5I	GGATG	4 cut(s)	347, 523, 747, 885
BstFNI	CGCG	1 cut(s)	967
BstH2I	RGCGCY	1 cut(s)	639
BstHHI	GCGC	3 cut(s)	638, 862, 967
BstKTI	GATC	7 cut(s)	73, 298, 677, 690, 762, 1353, 1506
BstMAI	GTCTC	4 cut(s)	282, 613, 1170, 1374
BstMBI	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
BstMWI	GCNNNNNNNGC	3 cut(s)	135, 913, 1141
BstNI	CCWGG	2 cut(s)	182, 909
BstNSI	RCATGY	5 cut(s)	43, 646, 745, 903, 1144
BstSCI	CCNGG	5 cut(s)	180, 907, 1058, 1096, 1469
BstSFI	CTRYAG	1 cut(s)	1284
BstSLI	GKGCMC	2 cut(s)	538, 918
BstUI	CGCG	1 cut(s)	967
BstV1I	GCAGC	7 cut(s)	30, 141, 581, 1000, 1033, 1036, 1357
BstV2I	GAAGAC	1 cut(s)	783
BstX2I	RGATCY	2 cut(s)	674, 759
BstXI	CCANNNNNNTGG	1 cut(s)	968
BstYI	RGATCY	2 cut(s)	674, 759
Bsu15I	ATCGAT	1 cut(s)	846
BsuRI	GGCC	4 cut(s)	412, 916, 1469, 1486
BsuTUI	ATCGAT	1 cut(s)	846
BtgI	CCRYGG	1 cut(s)	1481
BtrI	CACGTC	1 cut(s)	321
BtsCI	GGATG	4 cut(s)	347, 523, 747, 885
BtsI	GCAGTG	1 cut(s)	401
BtsIMutI	CAGTG	5 cut(s)	115, 401, 1360, 1366, 1410
Cac8I	GCNNGC	1 cut(s)	1402
CaiI	CAGNNNCTG	1 cut(s)	125
CciI	TCATGA	1 cut(s)	1218
CfoI	GCGC	3 cut(s)	638, 862, 967
Cfr10I	RCCGGY	2 cut(s)	331, 1322
Cfr13I	GGNCC	4 cut(s)	410, 914, 915, 1493
ClaI	ATCGAT	1 cut(s)	846
Csp6I	GTAC	7 cut(s)	27, 172, 376, 562, 713, 867, 1161
CspAI	ACCGGT	1 cut(s)	331
CviQI	GTAC	7 cut(s)	27, 172, 376, 562, 713, 867, 1161
DdeI	CTNAG	5 cut(s)	383, 656, 1085, 1359, 1413
DpnI	GATC	7 cut(s)	72, 297, 676, 689, 761, 1352, 1505
DpnII	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
DraIII	CACNNNGTG	1 cut(s)	1372
DrdI	GACNNNNNNGTC	1 cut(s)	742
DriI	GACNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	742
EaeI	YGGCCR	2 cut(s)	1467, 1484
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	319
EarI	CTCTTC	1 cut(s)	162
Eco130I	CCWWGG	2 cut(s)	133, 1579
Eco24I	GRGCYC	1 cut(s)	918
Eco31I	GGTCTC	3 cut(s)	282, 613, 1170
Eco47I	GGWCC	1 cut(s)	1493
Eco57I	CTGAAG	1 cut(s)	213
EcoO109I	RGGNCCY	1 cut(s)	915
EcoRII	CCWGG	2 cut(s)	180, 907
EcoT14I	CCWWGG	2 cut(s)	133, 1579
EcoT38I	GRGCYC	1 cut(s)	918
ErhI	CCWWGG	2 cut(s)	133, 1579
FaqI	GGGAC	1 cut(s)	990
FauI	CCCGC	1 cut(s)	927
FbaI	TGATCA	1 cut(s)	295
Fnu4HI	GCNGC	9 cut(s)	44, 130, 436, 570, 1014, 1047, 1050, 1346, 1427
FokI	GGATG	4 cut(s)	354, 530, 734, 872
FriOI	GRGCYC	1 cut(s)	918
Fsp4HI	GCNGC	9 cut(s)	44, 130, 436, 570, 1014, 1047, 1050, 1346, 1427
FspBI	CTAG	5 cut(s)	407, 831, 896, 1076, 1377
FspI	TGCGCA	1 cut(s)	861
GlaI	GCGC	3 cut(s)	637, 861, 966
GluI	GCNGC	9 cut(s)	44, 130, 436, 570, 1014, 1047, 1050, 1346, 1427
HaeII	RGCGCY	1 cut(s)	639
HaeIII	GGCC	4 cut(s)	412, 916, 1469, 1486
HapII	CCGG	8 cut(s)	253, 332, 348, 413, 1059, 1098, 1323, 1470
HhaI	GCGC	3 cut(s)	638, 862, 967
Hin6I	GCGC	3 cut(s)	636, 860, 965
HinP1I	GCGC	3 cut(s)	636, 860, 965
HincII	GTYRAC	1 cut(s)	430
HindII	GTYRAC	1 cut(s)	430
HpaII	CCGG	8 cut(s)	253, 332, 348, 413, 1059, 1098, 1323, 1470
HphI	GGTGA	5 cut(s)	41, 75, 258, 321, 1200
Hpy166II	GTNNAC	6 cut(s)	430, 536, 564, 838, 1390, 1476
Hpy188I	TCNGA	9 cut(s)	156, 295, 313, 421, 550, 759, 855, 929, 1006
Hpy188III	TCNNGA	3 cut(s)	348, 1087, 1219
Hpy8I	GTNNAC	6 cut(s)	430, 536, 564, 838, 1390, 1476
HpyAV	CCTTC	4 cut(s)	237, 644, 1270, 1522
HpyCH4III	ACNGT	5 cut(s)	110, 1181, 1370, 1560, 1568
HpyCH4IV	ACGT	1 cut(s)	320
HpyF10VI	GCNNNNNNNGC	3 cut(s)	135, 913, 1141
HpyF3I	CTNAG	5 cut(s)	383, 656, 1085, 1359, 1413
HpySE526I	ACGT	1 cut(s)	320
HspAI	GCGC	3 cut(s)	636, 860, 965
Kpn2I	TCCGGA	1 cut(s)	347
Ksp22I	TGATCA	1 cut(s)	295
Kzo9I	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
LmnI	GCTCC	2 cut(s)	616, 1423
Lsp1109I	GCAGC	7 cut(s)	30, 141, 581, 1000, 1033, 1036, 1357
LweI	GCATC	5 cut(s)	55, 335, 901, 1309, 1353
MaeI	CTAG	5 cut(s)	407, 831, 896, 1076, 1377
MaeII	ACGT	1 cut(s)	320
MaeIII	GTNAC	2 cut(s)	446, 455
MalI	GATC	7 cut(s)	72, 297, 676, 689, 761, 1352, 1505
MbiI	CCGCTC	1 cut(s)	1426
MboI	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
MboII	GAAGA	4 cut(s)	72, 179, 783, 1600
MflI	RGATCY	2 cut(s)	674, 759
MhlI	GDGCHC	3 cut(s)	538, 918, 1573
MluCI	AATT	4 cut(s)	96, 483, 574, 1543
MlyI	GAGTC	4 cut(s)	265, 843, 1289, 1319
MmeI	TCCRAC	3 cut(s)	627, 648, 1565
MroI	TCCGGA	1 cut(s)	347
MseI	TTAA	2 cut(s)	513, 1630
MslI	CAYNNNNRTG	2 cut(s)	966, 1621
MspA1I	CMGCKG	3 cut(s)	233, 435, 1348
MspCI	CTTAAG	1 cut(s)	512
MspI	CCGG	8 cut(s)	253, 332, 348, 413, 1059, 1098, 1323, 1470
MspR9I	CCNGG	5 cut(s)	182, 909, 1060, 1098, 1471
MvaI	CCWGG	2 cut(s)	182, 909
MvnI	CGCG	1 cut(s)	967
MwoI	GCNNNNNNNGC	3 cut(s)	135, 913, 1141
NciI	CCSGG	3 cut(s)	1060, 1098, 1471
NdeII	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
NlaIV	GGNNCC	4 cut(s)	618, 879, 916, 917
NmuCI	GTSAC	1 cut(s)	455
NsbI	TGCGCA	1 cut(s)	861
NspI	RCATGY	5 cut(s)	43, 646, 745, 903, 1144
PagI	TCATGA	1 cut(s)	1218
PciI	ACATGT	2 cut(s)	642, 741
PfeI	GAWTC	6 cut(s)	185, 221, 416, 930, 1090, 1238
PflMI	CCANNNNNTGG	1 cut(s)	125
PinAI	ACCGGT	1 cut(s)	331
PkrI	GCNGC	9 cut(s)	45, 131, 437, 571, 1015, 1048, 1051, 1347, 1428
PleI	GAGTC	4 cut(s)	264, 842, 1288, 1318
PpsI	GAGTC	4 cut(s)	264, 842, 1288, 1318
PscI	ACATGT	2 cut(s)	642, 741
Psp6I	CCWGG	2 cut(s)	180, 907
PspGI	CCWGG	2 cut(s)	180, 907
PspN4I	GGNNCC	4 cut(s)	618, 879, 916, 917
PspOMI	GGGCCC	1 cut(s)	914
PspPI	GGNCC	4 cut(s)	410, 914, 915, 1493
PstNI	CAGNNNCTG	1 cut(s)	125
PsuI	RGATCY	2 cut(s)	674, 759
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	7 cut(s)	28, 173, 377, 563, 714, 868, 1162
RsaNI	GTAC	7 cut(s)	27, 172, 376, 562, 713, 867, 1161
RseI	CAYNNNNRTG	2 cut(s)	966, 1621
SaqAI	TTAA	2 cut(s)	513, 1630
SatI	GCNGC	9 cut(s)	44, 130, 436, 570, 1014, 1047, 1050, 1346, 1427
Sau3AI	GATC	7 cut(s)	70, 295, 674, 687, 759, 1350, 1503
Sau96I	GGNCC	4 cut(s)	410, 914, 915, 1493
ScaI	AGTACT	1 cut(s)	173
SchI	GAGTC	4 cut(s)	265, 843, 1289, 1319
ScrFI	CCNGG	5 cut(s)	182, 909, 1060, 1098, 1471
SduI	GDGCHC	3 cut(s)	538, 918, 1573
SfaNI	GCATC	5 cut(s)	55, 335, 901, 1309, 1353
SfcI	CTRYAG	1 cut(s)	1284
SinI	GGWCC	1 cut(s)	1493
SmiMI	CAYNNNNRTG	2 cut(s)	966, 1621
SmlI	CTYRAG	2 cut(s)	512, 1267
SmoI	CTYRAG	2 cut(s)	512, 1267
Sse9I	AATT	4 cut(s)	96, 483, 574, 1543
SsiI	CCGC	6 cut(s)	86, 435, 920, 1348, 1426, 1614
SspMI	CTAG	5 cut(s)	407, 831, 896, 1076, 1377
StyD4I	CCNGG	5 cut(s)	180, 907, 1058, 1096, 1469
StyI	CCWWGG	2 cut(s)	133, 1579
TaaI	ACNGT	5 cut(s)	110, 1181, 1370, 1560, 1568
TaiI	ACGT	1 cut(s)	323
TaqI	TCGA	4 cut(s)	846, 1035, 1241, 1313
TaqII	GACCGA	1 cut(s)	595
TasI	AATT	4 cut(s)	96, 483, 574, 1543
TatI	WGTACW	4 cut(s)	26, 171, 375, 561
TauI	GCSGC	2 cut(s)	438, 1429
TfiI	GAWTC	6 cut(s)	185, 221, 416, 930, 1090, 1238
Tru1I	TTAA	2 cut(s)	513, 1630
Tru9I	TTAA	2 cut(s)	513, 1630
TscAI	CASTG	5 cut(s)	115, 408, 1360, 1373, 1417
TseFI	GTSAC	1 cut(s)	455
TseI	GCWGC	7 cut(s)	43, 129, 569, 1013, 1046, 1049, 1345
Tsp45I	GTSAC	1 cut(s)	455
TspDTI	ATGAA	3 cut(s)	840, 971, 1446
TspGWI	ACGGA	4 cut(s)	63, 1113, 1470, 1485
TspRI	CASTG	5 cut(s)	115, 408, 1360, 1373, 1417
Van91I	CCANNNNNTGG	1 cut(s)	125
Vha464I	CTTAAG	1 cut(s)	512
VneI	GTGCAC	1 cut(s)	534
VpaK11BI	GGWCC	1 cut(s)	1493
XapI	RAATTY	1 cut(s)	96
XceI	RCATGY	5 cut(s)	43, 646, 745, 903, 1144
XcmI	CCANNNNNNNNNTGG	1 cut(s)	968
XspI	CTAG	5 cut(s)	407, 831, 896, 1076, 1377
ZrmI	AGTACT	1 cut(s)	173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.