Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006328

Physical Location & Seq

Genomic Coordinates Forward (+)

5781418 .. 5786310

Gene Structure 4893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G16940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGACGGCGACGGTTTAGGCAGACTAATCGGCTCGGAGATTCATGGATTCCATACCTTACAAGATCTTGATGTACAGACAATGTTGGAGGAAGCAAAAAGCAGGTGGCTACGGCCAAACGAGATCCATGCAATCCTCTATAACCCGAAATACTTCACTATCAATGTCAAGCCAGTGAACTTACCCAATAGTGGCAGAATTATATTATTCGACCGTAAGATGTTGAGGAACTTCAGAAAGGATGGTCATAACTGGAAAAAGAAAAAGGATGGAAGGACAGTCAAAGAGGCTCATGAACACCTGAAAGTTGGTAACGAGGAAAGGATTCATGTATACTATGCGCATGGTGAAGATAACACTACCTTTGTTCGAAGATGTTATTGGTTACTGGATAAGGCTCGAGAGAACATCGTCCTTGTACATTACCGTGATACACAGGAGGCAGCTACAACATCGGGGGACTCAATCTCTAGTCCAATCTCCGTCTCGGAACAAACATTCCCTAATCGCGTGGCAGCTGAAGATATTGATACAGTTGTTAGAAATCATGATATTAGCCTTCATGATATCAATACGCTTGATTGGGATGAGCTGCTAGTACCAACCGATCTTAATAACCAATCTGCACCAACCGTAGATAATCTTTCATATTTCACAGAACCGCTCCAAAATGCTGCAAATGGCACTGCAGAGCATGGGAATGCGACAGTGGCTGATGGATCTCTTGATGCTTTGCTTAACGATGGTCCACAAAGTCGAGAGAGTTTTGGAAGGTGGATGAATTCATTTATCAGCGAATCTAATGGCTCACTGGAGGATCCTTCCTTTGAACCCATGGTTATGCCTAGGCAGGATCCATTAGCTCCTCAAGCTGTATTTCATTCTCACTCTAACATACCTGAGCAAGTGTTTAACATAACCGATGTTTCACCTGCTTGGGCCTATTCTTCCGAGAAAACTAAGATTCTGGTAACTGGGTTCTTGCATGACAGTTATCAACATCTCGAAAGATCAAACCTTTATTGCGTTTGCGGTGACTTTTGTGTCCCTGCGGAATATCTCCAGGCTGGAGTCTACCGTTGCATCATACCTCCACACTCGCCTGGTATGGTAAACCTCTATCTTAGTGCAGATGGACACAAACCAATCAGCCAATGTTTCAGATTCGAACACCGTGCAGTCCCAGTTCTTGATAAGACCGTCCCTGAAGACAATCAAGATTCCAAATGGGAAGAGTTTGAGTTCCAAGTTCGACTTTCTCATCTTCTGTTTACGTCTTCCAACAAACTCAACGTTCTCTCCAGCAAAATCTCACCTCATAACCTGCGAGATGCTAAAAAACTCGCTAGCAAAACAAATCATCTCTTAAACAGTTGGGCTTATCTAGTCAAGTCCATCCAGGGGAATAAGGTATCGTTTGATCAAGCGAAAGATCATCTCTTCGAGCTTTCTCTGAAGAACAGGCTTAAGGAATGGCTTATGGAGAAAGTGCTTGAAGGTCGCAACACATTGGATTATGATTCTAAAGGCCTCGGCGTGATCCACCTCTGTGCCAGTCTTGGATACACTTGGTCAGTCCAGCTGTTCTCATTGTCAGGCTTATCGTTGAATTTCCGTGATAAACAAGGGTGGACTGCTCTTCATTGGGCAGCATACTACGGAAGGGAGAAAATGGTGGCTGCTCTTCTCTCTGCTGGGGCAAGACCGAACCTGGTGACAGACTCGACGAAGGATAATCTTGGTGGATGCATGGCAGCTGATTTGGCACAGCAAAACGGATATGACGGTTTAGCTGCTTATCTTGCTGAGAAATGTTTGGTTGCTCAGTTTAGAGACATGAAAATTGCTGGAAACATCACTGGCGATCTGGAGGCTTGCAAGGCAGAGATGTTGAACCAAGGCACTCTACCGGAAGATGAGCAGAGTCTCAAGGATGCTCTTGCAGCATACAGAACAGCTGCAGAAGCAGCGGCTCGGATTCAAGGTGCGTTTAGGGAAAAAGCGCTAAAGGCAGCACGGTCAAGCGTGATTCAGTTTGCTAACAAAGAAGAAGAGGCCAAGAGCATAATCGCGGCGATGAAGATTCAGAATGCGTTCCGGAAATATGATACACGTAGGAAGATAGAAGCCGCTTACCGGATTCAATGCAGGTTCCAAACTTGGAAAATACGAAGAGAGTATCTGAACATGCGGCGCCAAGCAATTAGGATCCAGGCTGCTTTCAGGGGATTACAAGCAAGGAGGCAGTACAAGAAGATATTGTGGTCGGTAGGAGTATTGGAGAAGGCAGTTTTGAGGTGGAGACAAAAGAGAAAAGGGTTTAGAGGACTCCAGGTTGCAGCAGAGGAGGATTCTCCTGGTGAGGCACAGGAAGATTTCTACAAGACAAGCCAGAGACAAGCAGAGGAGAGGCTCGAGAGATCTGTAGTGCGAGTACAAGCCATGTTCAGGTCTAAGAAGGCTCAACAGGATTACAGAAGGATGAAACTCACTCATGAAGAAGCTCAGTTGGAGTACGGTTGCCTGGAAGATATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

845

Amino Acids

96.18

Weight (kDa)

8.09

Isoelectric Point (pI)

45.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	31 - 144	1.8e-44	CG-1 domain
Ank_2	PF12796	514 - 602	1.1e-08	Ankyrin repeats (3 copies)
Ank	PF00023	542 - 573	3.2e-07	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16940 AT3G16940 AT3G16940
fragaria_vesca	FvH4_4g19400 FvH4_4g19400
malus_domestica	MD16G1157900.v1.1
prunus_persica	Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1
pyrus_communis	pycom13g13450 pycom16g13290
rosa_chinensis	RchiOBHm_Chr4g0424431
rosa_laevigata	RLG00000007475
rosa_multiflora	Rmu_sc0003567.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366370
rosa_rugosa	Rorug04G0197700 Rorug04G0197800
rosa_samantha	Rh4AG253800 Rh4BG259100 Rh4CG270400 Rh4DG253600
rosa_wichuraiana	Rw4G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	93, 940
AasI	GACNNNNNNGTC	1 cut(s)	1043
Acc16I	TGCGCA	1 cut(s)	342
Acc36I	ACCTGC	4 cut(s)	93, 940, 1332, 2139
AccB1I	GGYRCC	1 cut(s)	2193
AccBSI	CCGCTC	1 cut(s)	664
AccI	GTMKAC	2 cut(s)	333, 1074
AccII	CGCG	2 cut(s)	510, 2072
AccIII	TCCGGA	1 cut(s)	2097
AciI	CCGC	7 cut(s)	662, 1032, 1052, 1970, 2072, 2130, 2191
AclI	AACGTT	1 cut(s)	1293
AclWI	GGATC	9 cut(s)	118, 727, 812, 825, 848, 861, 1534, 2203, 2216
AcoI	YGGCCR	1 cut(s)	113
AcsI	RAATTY	2 cut(s)	781, 1609
AcuI	CTGAAG	4 cut(s)	217, 540, 1227, 1475
AcyI	GRCGYC	1 cut(s)	2194
AfaI	GTAC	6 cut(s)	75, 420, 600, 2249, 2436, 2516
AfeI	AGCGCT	1 cut(s)	2004
AfiI	CCNNNNNNNGG	4 cut(s)	191, 1401, 2136, 2448
AflII	CTTAAG	1 cut(s)	1466
AflIII	ACRYGT	1 cut(s)	2111
AgsI	TTSAA	6 cut(s)	830, 1496, 1609, 1894, 1982, 2144
AjnI	CCWGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
AjuI	GAANNNNNNNTTGG	2 cut(s)	364, 396
AleI	CACNNNNGTG	1 cut(s)	1548
AloI	GAACNNNNNNTCC	2 cut(s)	483, 515
Alw26I	GTCTC	5 cut(s)	490, 1827, 1931, 2296, 2389
AlwI	GGATC	9 cut(s)	118, 727, 812, 825, 848, 861, 1534, 2203, 2216
AlwNI	CAGNNNCTG	1 cut(s)	713
Ama87I	CYCGRG	2 cut(s)	399, 2414
Aor13HI	TCCGGA	1 cut(s)	2097
Aor51HI	AGCGCT	1 cut(s)	2004
AoxI	GGCC	4 cut(s)	113, 939, 1528, 2055
ApoI	RAATTY	2 cut(s)	781, 1609
Asp700I	GAANNNNTTC	3 cut(s)	152, 324, 2093
AspA2I	CCTAGG	1 cut(s)	845
AspLEI	GCGC	3 cut(s)	343, 2005, 2196
AspS9I	GGNCC	2 cut(s)	746, 939
AsuHPI	GGTGA	6 cut(s)	359, 921, 1046, 1305, 1726, 2372
AsuII	TTCGAA	2 cut(s)	370, 1167
AsuNHI	GCTAGC	1 cut(s)	1346
AvaI	CYCGRG	2 cut(s)	399, 2414
AvaII	GGWCC	1 cut(s)	746
AvrII	CCTAGG	1 cut(s)	845
BaeI	ACNNNNGTAYC	2 cut(s)	522, 555
BamHI	GGATCC	3 cut(s)	817, 853, 2208
BanI	GGYRCC	1 cut(s)	2193
BbsI	GAAGAC	2 cut(s)	1215, 1269
BccI	CCATC	6 cut(s)	236, 263, 710, 737, 1127, 1403
BceAI	ACGGC	2 cut(s)	22, 128
BcgI	CGANNNNNNTGC	6 cut(s)	10, 44, 110, 144, 1157, 1191
BciT130I	CCWGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
BciVI	GTATCC	1 cut(s)	1556
BclI	TGATCA	1 cut(s)	1420
BcoDI	GTCTC	5 cut(s)	490, 1827, 1931, 2296, 2389
BfaI	CTAG	5 cut(s)	471, 596, 846, 1347, 1385
BfmI	CTRYAG	3 cut(s)	687, 1959, 2424
BfoI	RGCGCY	2 cut(s)	2006, 2197
BfrI	CTTAAG	1 cut(s)	1466
BfuAI	ACCTGC	4 cut(s)	93, 940, 1332, 2139
BfuI	GTATCC	1 cut(s)	1556
BglII	AGATCT	2 cut(s)	64, 2420
BlnI	CCTAGG	1 cut(s)	845
Bme1390I	CCNGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
Bme18I	GGWCC	1 cut(s)	746
BmeT110I	CYCGRG	2 cut(s)	399, 2414
BmgT120I	GGNCC	2 cut(s)	746, 939
BmiI	GGNNCC	5 cut(s)	819, 855, 2153, 2195, 2210
BmrFI	CCNGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
BmrI	ACTGGG	2 cut(s)	984, 1178
BmsI	GCATC	5 cut(s)	718, 1092, 1321, 1736, 1924
BmtI	GCTAGC	1 cut(s)	1350
BmuI	ACTGGG	2 cut(s)	984, 1178
BpiI	GAAGAC	2 cut(s)	1215, 1269
BpmI	CTGGAG	6 cut(s)	833, 1046, 1089, 1285, 1889, 2315
Bpu10I	CCTNAGC	1 cut(s)	900
Bpu14I	TTCGAA	2 cut(s)	370, 1167
BpuEI	CTTGAG	2 cut(s)	852, 1913
BsaAI	YACGTR	1 cut(s)	2114
BsaHI	GRCGYC	1 cut(s)	2194
BsaJI	CCNNGG	5 cut(s)	834, 845, 1399, 1531, 1897
BsaWI	WCCGGW	3 cut(s)	1909, 2097, 2136
BsaXI	ACNNNNNCTCC	2 cut(s)	1283, 1313
Bsc4I	CCNNNNNNNGG	4 cut(s)	191, 1401, 2136, 2448
Bse1I	ACTGG	8 cut(s)	173, 257, 393, 816, 979, 1184, 1554, 1864
BseAI	TCCGGA	1 cut(s)	2097
BseBI	CCWGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
BseDI	CCNNGG	5 cut(s)	834, 845, 1399, 1531, 1897
BseGI	GGATG	8 cut(s)	247, 274, 592, 783, 1395, 1751, 1939, 2487
BseLI	CCNNNNNNNGG	4 cut(s)	191, 1401, 2136, 2448
BseMII	CTCAG	4 cut(s)	891, 1797, 1838, 2519
BseNI	ACTGG	8 cut(s)	173, 257, 393, 816, 979, 1184, 1554, 1864
BseRI	GAGGAG	3 cut(s)	855, 2360, 2420
BseYI	CCCAGC	1 cut(s)	1694
BsgI	GTGCAG	3 cut(s)	609, 1149, 1197
Bsh1236I	CGCG	2 cut(s)	510, 2072
Bsh1285I	CGRYCG	1 cut(s)	214
BshFI	GGCC	4 cut(s)	115, 941, 1530, 2057
BshNI	GGYRCC	1 cut(s)	2193
BsiEI	CGRYCG	1 cut(s)	214
BsiHKCI	CYCGRG	2 cut(s)	399, 2414
BsiSI	CCGG	3 cut(s)	1910, 2098, 2137
BslFI	GGGAC	4 cut(s)	473, 1031, 1166, 1187
BslI	CCNNNNNNNGG	4 cut(s)	191, 1401, 2136, 2448
BsmAI	GTCTC	5 cut(s)	490, 1827, 1931, 2296, 2389
BsmBI	CGTCTC	1 cut(s)	490
BsmFI	GGGAC	4 cut(s)	473, 1031, 1166, 1187
BsmI	GAATGC	2 cut(s)	706, 2095
BsnI	GGCC	4 cut(s)	115, 941, 1530, 2057
BsoBI	CYCGRG	2 cut(s)	399, 2414
Bsp119I	TTCGAA	2 cut(s)	370, 1167
Bsp13I	TCCGGA	1 cut(s)	2097
Bsp1407I	TGTACA	2 cut(s)	73, 418
Bsp19I	CCATGG	1 cut(s)	834
BspACI	CCGC	7 cut(s)	662, 1032, 1052, 1970, 2072, 2130, 2191
BspANI	GGCC	4 cut(s)	115, 941, 1530, 2057
BspCNI	CTCAG	4 cut(s)	892, 1798, 1837, 2518
BspEI	TCCGGA	1 cut(s)	2097
BspFNI	CGCG	2 cut(s)	510, 2072
BspHI	TCATGA	4 cut(s)	292, 547, 562, 2494
BspLI	GGNNCC	5 cut(s)	819, 855, 2153, 2195, 2210
BspMAI	CTGCAG	2 cut(s)	691, 1963
BspMI	ACCTGC	4 cut(s)	93, 940, 1332, 2139
BspOI	GCTAGC	1 cut(s)	1350
BspPI	GGATC	9 cut(s)	118, 727, 812, 825, 848, 861, 1534, 2203, 2216
BspQI	GCTCTTC	2 cut(s)	1644, 1689
BspT104I	TTCGAA	2 cut(s)	370, 1167
BspT107I	GGYRCC	1 cut(s)	2193
BspTI	CTTAAG	1 cut(s)	1466
BsrBI	CCGCTC	1 cut(s)	664
BsrGI	TGTACA	2 cut(s)	73, 418
BsrI	ACTGG	8 cut(s)	173, 257, 393, 816, 979, 1184, 1554, 1864
BssECI	CCNNGG	5 cut(s)	834, 845, 1399, 1531, 1897
BssNAI	GTATAC	1 cut(s)	334
BssNI	GRCGYC	1 cut(s)	2194
BssT1I	CCWWGG	3 cut(s)	834, 845, 1897
Bst1107I	GTATAC	1 cut(s)	334
Bst2UI	CCWGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
Bst6I	CTCTTC	6 cut(s)	1227, 1445, 1644, 1689, 2046, 2167
BstACI	GRCGYC	1 cut(s)	2194
BstAFI	CTTAAG	1 cut(s)	1466
BstAUI	TGTACA	2 cut(s)	73, 418
BstBAI	YACGTR	1 cut(s)	2114
BstBI	TTCGAA	2 cut(s)	370, 1167
BstC8I	GCNNGC	2 cut(s)	1348, 1876
BstDEI	CTNAG	7 cut(s)	900, 960, 1124, 1806, 1824, 2454, 2505
BstDSI	CCRYGG	1 cut(s)	834
BstF5I	GGATG	8 cut(s)	247, 274, 592, 783, 1395, 1751, 1939, 2487
BstFNI	CGCG	2 cut(s)	510, 2072
BstH2I	RGCGCY	2 cut(s)	2006, 2197
BstHHI	GCGC	3 cut(s)	343, 2005, 2196
BstMAI	GTCTC	5 cut(s)	490, 1827, 1931, 2296, 2389
BstMCI	CGRYCG	1 cut(s)	214
BstMWI	GCNNNNNNNGC	9 cut(s)	710, 869, 1763, 1802, 1880, 1943, 1964, 1967, 2009
BstNI	CCWGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
BstNSI	RCATGY	1 cut(s)	2191
BstSCI	CCNGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
BstSFI	CTRYAG	3 cut(s)	687, 1959, 2424
BstUI	CGCG	2 cut(s)	510, 2072
BstV2I	GAAGAC	2 cut(s)	1215, 1269
BstX2I	RGATCY	7 cut(s)	64, 123, 719, 817, 853, 2208, 2420
BstYI	RGATCY	7 cut(s)	64, 123, 719, 817, 853, 2208, 2420
BstZ17I	GTATAC	1 cut(s)	334
BsuI	GTATCC	1 cut(s)	1556
BsuRI	GGCC	4 cut(s)	115, 941, 1530, 2057
BtgI	CCRYGG	1 cut(s)	834
BtgZI	GCGATG	1 cut(s)	2090
BtsCI	GGATG	8 cut(s)	247, 274, 592, 783, 1395, 1751, 1939, 2487
BtsI	GCAGTG	1 cut(s)	684
BtsIMutI	CAGTG	5 cut(s)	180, 684, 714, 809, 1857
BveI	ACCTGC	4 cut(s)	93, 940, 1332, 2139
Cac8I	GCNNGC	2 cut(s)	1348, 1876
CaiI	CAGNNNCTG	1 cut(s)	713
CciI	TCATGA	4 cut(s)	292, 547, 562, 2494
CfoI	GCGC	3 cut(s)	343, 2005, 2196
Cfr13I	GGNCC	2 cut(s)	746, 939
CsiI	ACCWGGT	1 cut(s)	1710
Csp6I	GTAC	6 cut(s)	74, 419, 599, 2248, 2435, 2515
CviQI	GTAC	6 cut(s)	74, 419, 599, 2248, 2435, 2515
DdeI	CTNAG	7 cut(s)	900, 960, 1124, 1806, 1824, 2454, 2505
DinI	GGCGCC	1 cut(s)	2195
DrdI	GACNNNNNNGTC	1 cut(s)	1043
DseDI	GACNNNNNNGTC	1 cut(s)	1043
EaeI	YGGCCR	1 cut(s)	113
Eam1104I	CTCTTC	6 cut(s)	1227, 1445, 1644, 1689, 2046, 2167
EarI	CTCTTC	6 cut(s)	1227, 1445, 1644, 1689, 2046, 2167
Eco130I	CCWWGG	3 cut(s)	834, 845, 1897
Eco147I	AGGCCT	1 cut(s)	1530
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	1 cut(s)	746
Eco47III	AGCGCT	1 cut(s)	2004
Eco57I	CTGAAG	4 cut(s)	217, 540, 1227, 1475
Eco88I	CYCGRG	2 cut(s)	399, 2414
EcoRI	GAATTC	1 cut(s)	781
EcoRII	CCWGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
EcoRV	GATATC	1 cut(s)	568
EcoT14I	CCWWGG	3 cut(s)	834, 845, 1897
EcoT22I	ATGCAT	1 cut(s)	1751
EgeI	GGCGCC	1 cut(s)	2195
EheI	GGCGCC	1 cut(s)	2195
ErhI	CCWWGG	3 cut(s)	834, 845, 1897
Esp3I	CGTCTC	1 cut(s)	490
FalI	AAGNNNNNCTT	2 cut(s)	1239, 1271
FaqI	GGGAC	4 cut(s)	473, 1031, 1166, 1187
FbaI	TGATCA	1 cut(s)	1420
FblI	GTMKAC	2 cut(s)	333, 1074
FokI	GGATG	8 cut(s)	254, 281, 599, 790, 1382, 1758, 1946, 2494
FspAI	RTGCGCAY	1 cut(s)	342
FspBI	CTAG	5 cut(s)	471, 596, 846, 1347, 1385
FspI	TGCGCA	1 cut(s)	342
GlaI	GCGC	3 cut(s)	342, 2004, 2195
GsaI	CCCAGC	1 cut(s)	1698
GsuI	CTGGAG	6 cut(s)	833, 1046, 1089, 1285, 1889, 2315
HaeII	RGCGCY	2 cut(s)	2006, 2197
HaeIII	GGCC	4 cut(s)	115, 941, 1530, 2057
HapII	CCGG	3 cut(s)	1910, 2098, 2137
HhaI	GCGC	3 cut(s)	343, 2005, 2196
Hin1I	GRCGYC	1 cut(s)	2194
Hin6I	GCGC	3 cut(s)	341, 2003, 2194
HinP1I	GCGC	3 cut(s)	341, 2003, 2194
HpaII	CCGG	3 cut(s)	1910, 2098, 2137
HphI	GGTGA	6 cut(s)	359, 921, 1046, 1305, 1726, 2372
Hpy166II	GTNNAC	7 cut(s)	178, 334, 749, 1075, 1114, 1272, 1632
Hpy188I	TCNGA	9 cut(s)	37, 236, 490, 952, 1163, 1455, 1977, 2088, 2184
Hpy8I	GTNNAC	7 cut(s)	178, 334, 749, 1075, 1114, 1272, 1632
Hpy99I	CGWCG	2 cut(s)	14, 1729
HpyCH4IV	ACGT	3 cut(s)	1274, 1293, 2113
HpyF10VI	GCNNNNNNNGC	9 cut(s)	710, 869, 1763, 1802, 1880, 1943, 1964, 1967, 2009
HpyF3I	CTNAG	7 cut(s)	900, 960, 1124, 1806, 1824, 2454, 2505
HpySE526I	ACGT	3 cut(s)	1274, 1293, 2113
Hsp92I	GRCGYC	1 cut(s)	2194
HspAI	GCGC	3 cut(s)	341, 2003, 2194
KasI	GGCGCC	1 cut(s)	2193
Kpn2I	TCCGGA	1 cut(s)	2097
Ksp22I	TGATCA	1 cut(s)	1420
LguI	GCTCTTC	2 cut(s)	1644, 1689
LmnI	GCTCC	2 cut(s)	669, 868
LweI	GCATC	5 cut(s)	718, 1092, 1321, 1736, 1924
MabI	ACCWGGT	1 cut(s)	1710
MaeI	CTAG	5 cut(s)	471, 596, 846, 1347, 1385
MaeII	ACGT	3 cut(s)	1274, 1293, 2113
MaeIII	GTNAC	5 cut(s)	311, 384, 970, 1034, 1714
MbiI	CCGCTC	1 cut(s)	664
MflI	RGATCY	7 cut(s)	64, 123, 719, 817, 853, 2208, 2420
MluCI	AATT	5 cut(s)	198, 781, 1609, 1842, 2202
Mly113I	GGCGCC	1 cut(s)	2194
MlyI	GAGTC	5 cut(s)	455, 1080, 1715, 1933, 2322
MmeI	TCCRAC	3 cut(s)	66, 1305, 2490
Mph1103I	ATGCAT	1 cut(s)	1751
MroI	TCCGGA	1 cut(s)	2097
MroXI	GAANNNNTTC	3 cut(s)	152, 324, 2093
MseI	TTAA	5 cut(s)	612, 738, 912, 1367, 1467
MslI	CAYNNNNRTG	4 cut(s)	426, 699, 839, 1548
MspA1I	CMGCKG	5 cut(s)	518, 1582, 1757, 1958, 1970
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	3 cut(s)	1910, 2098, 2137
MspR9I	CCNGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
Mva1269I	GAATGC	2 cut(s)	706, 2095
MvaI	CCWGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
MvnI	CGCG	2 cut(s)	510, 2072
MwoI	GCNNNNNNNGC	9 cut(s)	710, 869, 1763, 1802, 1880, 1943, 1964, 1967, 2009
NarI	GGCGCC	1 cut(s)	2194
NcoI	CCATGG	1 cut(s)	834
NheI	GCTAGC	1 cut(s)	1346
NlaIV	GGNNCC	5 cut(s)	819, 855, 2153, 2195, 2210
NmeAIII	GCCGAG	1 cut(s)	1512
NmuCI	GTSAC	2 cut(s)	1034, 1714
NsbI	TGCGCA	1 cut(s)	342
NsiI	ATGCAT	1 cut(s)	1751
NspI	RCATGY	1 cut(s)	2191
NspV	TTCGAA	2 cut(s)	370, 1167
OliI	CACNNNNGTG	1 cut(s)	1548
PaeR7I	CTCGAG	2 cut(s)	399, 2414
PagI	TCATGA	4 cut(s)	292, 547, 562, 2494
PaqCI	CACCTGC	2 cut(s)	93, 940
PceI	AGGCCT	1 cut(s)	1530
PciSI	GCTCTTC	2 cut(s)	1644, 1689
PctI	GAATGC	2 cut(s)	706, 2095
PdmI	GAANNNNTTC	3 cut(s)	152, 324, 2093
PleI	GAGTC	5 cut(s)	455, 1079, 1715, 1932, 2322
PluTI	GGCGCC	1 cut(s)	2197
PpsI	GAGTC	5 cut(s)	455, 1079, 1715, 1932, 2322
Ppu21I	YACGTR	1 cut(s)	2114
Psp1406I	AACGTT	1 cut(s)	1293
Psp6I	CCWGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
PspFI	CCCAGC	1 cut(s)	1694
PspGI	CCWGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
PspN4I	GGNNCC	5 cut(s)	819, 855, 2153, 2195, 2210
PspPI	GGNCC	2 cut(s)	746, 939
PstI	CTGCAG	2 cut(s)	691, 1963
PstNI	CAGNNNCTG	1 cut(s)	713
PsuI	RGATCY	7 cut(s)	64, 123, 719, 817, 853, 2208, 2420
PvuII	CAGCTG	4 cut(s)	518, 1582, 1757, 1958
RsaI	GTAC	6 cut(s)	75, 420, 600, 2249, 2436, 2516
RsaNI	GTAC	6 cut(s)	74, 419, 599, 2248, 2435, 2515
RseI	CAYNNNNRTG	4 cut(s)	426, 699, 839, 1548
SapI	GCTCTTC	2 cut(s)	1644, 1689
SaqAI	TTAA	5 cut(s)	612, 738, 912, 1367, 1467
Sau96I	GGNCC	2 cut(s)	746, 939
SchI	GAGTC	5 cut(s)	455, 1080, 1715, 1933, 2322
ScrFI	CCNGG	8 cut(s)	1064, 1104, 1400, 1712, 2213, 2333, 2358, 2525
SexAI	ACCWGGT	1 cut(s)	1710
SfaNI	GCATC	5 cut(s)	718, 1092, 1321, 1736, 1924
SfcI	CTRYAG	3 cut(s)	687, 1959, 2424
SfoI	GGCGCC	1 cut(s)	2195
Sfr274I	CTCGAG	2 cut(s)	399, 2414
SfuI	TTCGAA	2 cut(s)	370, 1167
SinI	GGWCC	1 cut(s)	746
SlaI	CTCGAG	2 cut(s)	399, 2414
SmiMI	CAYNNNNRTG	4 cut(s)	426, 699, 839, 1548
SmlI	CTYRAG	5 cut(s)	399, 867, 1466, 1928, 2414
SmoI	CTYRAG	5 cut(s)	399, 867, 1466, 1928, 2414
Sse9I	AATT	5 cut(s)	198, 781, 1609, 1842, 2202
SseBI	AGGCCT	1 cut(s)	1530
SsiI	CCGC	7 cut(s)	662, 1032, 1052, 1970, 2072, 2130, 2191
SspDI	GGCGCC	1 cut(s)	2193
SspMI	CTAG	5 cut(s)	471, 596, 846, 1347, 1385
StuI	AGGCCT	1 cut(s)	1530
StyD4I	CCNGG	8 cut(s)	1062, 1102, 1398, 1710, 2211, 2331, 2356, 2523
StyI	CCWWGG	3 cut(s)	834, 845, 1897
TaiI	ACGT	3 cut(s)	1277, 1296, 2116
TaqII	GACCGA	1 cut(s)	1720
TasI	AATT	5 cut(s)	198, 781, 1609, 1842, 2202
TatI	WGTACW	4 cut(s)	73, 418, 2247, 2434
TauI	GCSGC	4 cut(s)	1973, 2075, 2132, 2194
Tru1I	TTAA	5 cut(s)	612, 738, 912, 1367, 1467
Tru9I	TTAA	5 cut(s)	612, 738, 912, 1367, 1467
TscAI	CASTG	5 cut(s)	180, 691, 714, 816, 1864
TseFI	GTSAC	2 cut(s)	1034, 1714
Tsp45I	GTSAC	2 cut(s)	1034, 1714
TspGWI	ACGGA	4 cut(s)	472, 1604, 1674, 1791
TspRI	CASTG	5 cut(s)	180, 691, 714, 816, 1864
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	1 cut(s)	746
XapI	RAATTY	2 cut(s)	781, 1609
XceI	RCATGY	1 cut(s)	2191
XhoI	CTCGAG	2 cut(s)	399, 2414
XmaJI	CCTAGG	1 cut(s)	845
XmiI	GTMKAC	2 cut(s)	333, 1074
XmnI	GAANNNNTTC	3 cut(s)	152, 324, 2093
XspI	CTAG	5 cut(s)	471, 596, 846, 1347, 1385
Zsp2I	ATGCAT	1 cut(s)	1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.