Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006328

Physical Location & Seq

Genomic Coordinates Reverse (-)

17268501 .. 17275725

Gene Structure 7225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007475

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGGACAAACCGCTCGTGGGTTCTGAGATTCATGGATTTCATACAATGCAAGATTTGGATGTTGACACTATTATGGAGGAAGCCAAAGGACGATGGCTCCGCCCAAACGAAATTCATGCAATACTCTATAATTACAAGTATTTCACCATCCATGTCAAGCCAGTGAACTTGCCCCAAAGTGGCACCATTGTATTGTTTGACCGTAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAAAAAAGATGGGAAGACAGTCAAAGAAGCTCATGAACACTTGAAAGTTGGTAATGAAGAAAGGATTCATGTATACTATGCCCATGGCGAGGATAGCCCAACCTTTGTCCGGAGGTGTTATTGGCTGCTTGATAAGAGTCTAGAACACATAGTCCTTGTTCATTACCGTGAAACACAAGAGGGTTCTCCAGCCACACCTGTGAATTCCAATTCAAATTCTAGTTCTATCTCGGACCCATCTGCTCCTTGGCGTCTATCAGAAGAACTTGACTCCGGGACTAACAATTCATATTATGGTGGTGCAAATGAACTGTTAGAGCCTGGTATTGTTTTGAATGTTAATAATCATGAACAAAGGCTCCATGATATCAATACACTTGAATGGGATGAGCTTTTGGTTACATATGATTCCAAAGGAGACAAAGTTTCAGGCTTTGACCAGCAGAATCAACTTGTGGGAAATGGCGCCATAAGTGGTGGAACTAGTGGTTTACCAGCTGAAGTTTCTTCTTTTGGCAATTTACTCAATCCAAGTGTGAGGACAGGAAACATTCATTTCAATCTTCCAGACAGTAATTATGTTCAGACACTGGAGGGTGAGGTGAATTCAAATGCACAGAGAACGGATTCTGTTGTTAAGGGCCCCTGTGATTCCTCGGACATTTTGGGTAATGATGGATTGCGTAGTCAGGACAGTTTTGGGAGGTGGATAAACCAGATTATGACCGACTCTCCGGGTTCAGTGGATGACCCAGTGCTTGGATCCTCATTTCCAGCTTCTCAGAGTTCATTTGCTTCTCCAGCAATGGAACATATTCAATCTTCTGTTCCTGAGCAAATATTTATCATAACCGATGTTTCACCTGCATGGGCTTTCTCAAATGAGAAAACAAAGATTCTGATCACTGGCTTCTTTCATCAAGAGTTTTTGGATCTTGCGAAGTCCAATCTACTTTGTATCTGTGGCGATGTATGTATTCCTGCTGAAATTGTTCAGGTTGGGGTATATCGATGTTTCGTACCACCACATGTGCCCAGATTAGTGAACCTTTTCATTAGTCTTGATGGTCATAAACCCATAAGCCAAGTACAAAATTTTGAATATCGATCTCCTGTAATGAGTAACTTAGTAGTTCCTTCAGGAGAGAACAATTCGGAAGTGTTCCAATTACAGATGCGGCTTGCTCATTTGCTTTTCTCATCATCTAAAAGCTTGAACATTGCATCTAGTAAAGTATCACCACATACCCTCAAAGAAGCCAAGAAGTTTTCCCACAGAACTTCTCACATATCAAATGGCTGGCAATATTTGATCAAGTCAATTGAAGTCAACAATACTCCTTTACCACTGGCAAAGGATAGTTTGTTTGAACTTATTTTGAAGAACAGACTAAACGATTGGCTGTTGGAGAAAGTTCTTGACAGCTCTAAAACCAAAGAATATGATGGTCATGGTCAAGGAGTAATCCACTTATGTGCTATTCTAGATTATACCTGGGCTGTTCGATTGTTTTCATGGTCTGGCTTGTCATTAGACTTCCGTGATAGACGTGGATGGACGGCCCTTCATTGCGCGGCATATTATGGAAGGGAGAAAATGGTTGCAGTTCTATTATCTGCAGGGGCAAAGCCAAACTTGGTCACAGATCCCACTTCAGAAAACCCTGGTGGTTGCACTGCTGCTGATCTTGCATCCATGAAGGGCTATGATGGCTTAGCAGCTTATCTTTCAGAAAAGGCTTTGCTAAGACAATTTGAGGACATGAGTTTAGCTGGAAATGTTAGTGGTTCCCTCCAAACTAACACAAACTGTTATGAGTACTCTGAGAATCTCAGTGAGGAAGACCTGTATCTGAAGGATACTTTAACAGCCTATAGGACAGCTGCTGATGCAGCAGCACGAATACAAGCTGCCTTCAGGGAAAACGCACTAAAATTAAAGACTAAAGCAGTTGAATCTTACATTCCTGAGGATGAAGCACGCAGTATAATTGCAGCATTGAAGATTCAACATGCATTTCGCCACTATGATACACGAAAAAAGATGGCAGCTGCTGCCCGTATTCAATATAGGTTCCGTACATGGAAGATACGTCAAGAGTTCCTTAATATGCGCCGTCAAGCTGTCAAAATTCAAGCTGCTTTTCGAGCCTTCCAAACGCGGAAGCAGTACCGCAAAATTCTATGGGGAGTCGGAGTGCTTGAGAAAGCTGTTCTGCGGTGGCGCTTAAAGAGAAAAGGGCTTCGGGGGCTTCAGATTGATCCCATTGAAGCTGATGGAGATGAGAAGCAGGAAAGTGATACAGAAGAGGACTTCTACCGAAACAGCCGAAAGCAAGCTGAAGAGCGTGTTGAGAGATCCATTGTGCGGGTTCAGGCCATGTTCCGCTCCAAAAAAGCACAGCAAGAATATAGTAGGATGAAGTTGGCTCATACTGAAGCAAAGCTGGAATATGAAGATATTTTCGGCCCTGACAATAACATGCGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

914

Amino Acids

103.12

Weight (kDa)

6.86

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	27 - 140	1.7e-46	CG-1 domain
Ank_2	PF12796	561 - 629	4.5e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	572 - 662	1.1e-07	Ankyrin repeats (3 copies)
Ank	PF00023	601 - 631	4e-07	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16940 AT3G16940 AT3G16940
fragaria_vesca	FvH4_4g19400 FvH4_4g19400
malus_domestica	MD16G1157900.v1.1
prunus_persica	Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1
pyrus_communis	pycom13g13450 pycom16g13290
rosa_chinensis	RchiOBHm_Chr4g0424431
rosa_laevigata	RLG00000007475
rosa_multiflora	Rmu_sc0003567.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366370
rosa_rugosa	Rorug04G0197700 Rorug04G0197800
rosa_samantha	Rh4AG253800 Rh4BG259100 Rh4CG270400 Rh4DG253600
rosa_wichuraiana	Rw4G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1120
Acc36I	ACCTGC	1 cut(s)	1120
AccB1I	GGYRCC	2 cut(s)	182, 713
AccB7I	CCANNNNNTGG	1 cut(s)	1007
AccBSI	CCGCTC	2 cut(s)	13, 2637
AccI	GTMKAC	1 cut(s)	321
AccII	CGCG	2 cut(s)	1823, 2410
AccIII	TCCGGA	1 cut(s)	357
AciI	CCGC	9 cut(s)	11, 100, 1426, 1823, 2410, 2422, 2467, 2617, 2635
AclWI	GGATC	6 cut(s)	1005, 1018, 1188, 1889, 2504, 2601
AcsI	RAATTY	7 cut(s)	111, 451, 463, 853, 1342, 2379, 2427
AcuI	CTGAAG	9 cut(s)	205, 768, 1371, 1887, 2123, 2149, 2486, 2610, 2706
AcyI	GRCGYC	2 cut(s)	499, 714
AfaI	GTAC	5 cut(s)	1269, 1338, 2069, 2329, 2420
AfiI	CCNNNNNNNGG	6 cut(s)	17, 179, 337, 357, 1007, 2616
AflIII	ACRYGT	1 cut(s)	1276
AhlI	ACTAGT	1 cut(s)	731
AjiI	CACGTC	1 cut(s)	1799
AjnI	CCWGG	3 cut(s)	568, 1742, 1912
AleI	CACNNNNGTG	2 cut(s)	446, 1722
AloI	GAACNNNNNNTCC	4 cut(s)	384, 416, 591, 623
Alw26I	GTCTC	1 cut(s)	660
AlwI	GGATC	6 cut(s)	1005, 1018, 1188, 1889, 2504, 2601
AlwNI	CAGNNNCTG	3 cut(s)	838, 2135, 2303
Aor13HI	TCCGGA	1 cut(s)	357
AoxI	GGCC	4 cut(s)	889, 1809, 2625, 2716
ApaI	GGGCCC	1 cut(s)	893
ApoI	RAATTY	7 cut(s)	111, 451, 463, 853, 1342, 2379, 2427
Asp700I	GAANNNNTTC	5 cut(s)	312, 874, 1062, 1239, 1298
AspLEI	GCGC	4 cut(s)	716, 1823, 2364, 2475
AspS9I	GGNCC	5 cut(s)	481, 889, 890, 1810, 2717
AsuC2I	CCSGG	2 cut(s)	523, 984
AsuHPI	GGTGA	5 cut(s)	136, 857, 862, 1101, 1479
AvaII	GGWCC	1 cut(s)	481
AxyI	CCTNAGG	1 cut(s)	2217
BaeGI	GKGCMC	2 cut(s)	893, 1284
BamHI	GGATCC	1 cut(s)	1010
BanI	GGYRCC	2 cut(s)	182, 713
BanII	GRGCYC	1 cut(s)	893
BauI	CACGAG	1 cut(s)	14
BbsI	GAAGAC	2 cut(s)	269, 2097
BceAI	ACGGC	2 cut(s)	1824, 2349
BcgI	CGANNNNNNTGC	2 cut(s)	98, 132
BciT130I	CCWGG	3 cut(s)	570, 1744, 1914
BciVI	GTATCC	1 cut(s)	2101
BclI	TGATCA	2 cut(s)	1149, 1560
BcnI	CCSGG	2 cut(s)	523, 984
BcoDI	GTCTC	1 cut(s)	660
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	5 cut(s)	389, 468, 732, 1476, 1733
BfmI	CTRYAG	2 cut(s)	1866, 2122
BfoI	RGCGCY	2 cut(s)	717, 2476
BfuAI	ACCTGC	1 cut(s)	1120
BfuI	GTATCC	1 cut(s)	2101
BlpI	GCTNAGC	1 cut(s)	1963
BmcAI	AGTACT	1 cut(s)	2069
Bme1390I	CCNGG	5 cut(s)	523, 570, 984, 1744, 1914
Bme18I	GGWCC	1 cut(s)	481
BmgBI	CACGTC	1 cut(s)	1799
BmgT120I	GGNCC	5 cut(s)	481, 889, 890, 1810, 2717
BmrFI	CCNGG	5 cut(s)	523, 570, 984, 1744, 1914
BmrI	ACTGGG	1 cut(s)	995
BmsI	GCATC	5 cut(s)	198, 1413, 1481, 1949, 2128
BmuI	ACTGGG	1 cut(s)	995
BpiI	GAAGAC	2 cut(s)	269, 2097
BpmI	CTGGAG	3 cut(s)	420, 860, 1032
Bpu10I	CCTNAGC	1 cut(s)	1080
Bpu1102I	GCTNAGC	1 cut(s)	1963
BpuEI	CTTGAG	1 cut(s)	2471
BpuMI	CCSGG	2 cut(s)	523, 984
Bsa29I	ATCGAT	2 cut(s)	1258, 1354
BsaBI	GATNNNNATC	1 cut(s)	1148
BsaHI	GRCGYC	2 cut(s)	499, 714
BsaJI	CCNNGG	5 cut(s)	331, 494, 903, 1743, 1912
BsaWI	WCCGGW	1 cut(s)	357
Bsc4I	CCNNNNNNNGG	6 cut(s)	17, 179, 337, 357, 1007, 2616
Bse1I	ACTGG	6 cut(s)	161, 245, 843, 1001, 1159, 1602
Bse21I	CCTNAGG	1 cut(s)	2217
Bse3DI	GCAATG	3 cut(s)	1059, 1467, 1816
Bse8I	GATNNNNATC	1 cut(s)	1148
BseAI	TCCGGA	1 cut(s)	357
BseBI	CCWGG	3 cut(s)	570, 1744, 1914
BseCI	ATCGAT	2 cut(s)	1258, 1354
BseDI	CCNNGG	5 cut(s)	331, 494, 903, 1743, 1912
BseGI	GGATG	8 cut(s)	64, 147, 640, 1000, 1808, 1940, 2227, 2673
BseJI	GATNNNNATC	1 cut(s)	1148
BseLI	CCNNNNNNNGG	6 cut(s)	17, 179, 337, 357, 1007, 2616
BseMI	GCAATG	3 cut(s)	1059, 1467, 1816
BseMII	CTCAG	6 cut(s)	15, 1043, 1071, 2064, 2095, 2208
BseNI	ACTGG	6 cut(s)	161, 245, 843, 1001, 1159, 1602
BseSI	GKGCMC	2 cut(s)	893, 1284
Bsh1236I	CGCG	2 cut(s)	1823, 2410
BshFI	GGCC	4 cut(s)	891, 1811, 2627, 2718
BshNI	GGYRCC	2 cut(s)	182, 713
BshVI	ATCGAT	2 cut(s)	1258, 1354
BsiSI	CCGG	3 cut(s)	358, 522, 983
BslFI	GGGAC	1 cut(s)	538
BslI	CCNNNNNNNGG	6 cut(s)	17, 179, 337, 357, 1007, 2616
BsmAI	GTCTC	1 cut(s)	660
BsmFI	GGGAC	1 cut(s)	538
BsnI	GGCC	4 cut(s)	891, 1811, 2627, 2718
Bsp120I	GGGCCC	1 cut(s)	889
Bsp1286I	GDGCHC	2 cut(s)	893, 1284
Bsp13I	TCCGGA	1 cut(s)	357
Bsp143I	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
Bsp1720I	GCTNAGC	1 cut(s)	1963
Bsp19I	CCATGG	1 cut(s)	331
BspACI	CCGC	9 cut(s)	11, 100, 1426, 1823, 2410, 2422, 2467, 2617, 2635
BspANI	GGCC	4 cut(s)	891, 1811, 2627, 2718
BspCNI	CTCAG	6 cut(s)	16, 1042, 1072, 2065, 2094, 2209
BspDI	ATCGAT	2 cut(s)	1258, 1354
BspEI	TCCGGA	1 cut(s)	357
BspFNI	CGCG	2 cut(s)	1823, 2410
BspHI	TCATGA	2 cut(s)	280, 595
BspMAI	CTGCAG	1 cut(s)	1870
BspMI	ACCTGC	1 cut(s)	1120
BspPI	GGATC	6 cut(s)	1005, 1018, 1188, 1889, 2504, 2601
BspQI	GCTCTTC	1 cut(s)	2586
BspT107I	GGYRCC	2 cut(s)	182, 713
BsrBI	CCGCTC	2 cut(s)	13, 2637
BsrDI	GCAATG	3 cut(s)	1059, 1467, 1816
BsrI	ACTGG	6 cut(s)	161, 245, 843, 1001, 1159, 1602
BssECI	CCNNGG	5 cut(s)	331, 494, 903, 1743, 1912
BssMI	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
BssNAI	GTATAC	1 cut(s)	322
BssNI	GRCGYC	2 cut(s)	499, 714
BssSI	CACGAG	1 cut(s)	14
BssT1I	CCWWGG	2 cut(s)	331, 494
Bst1107I	GTATAC	1 cut(s)	322
Bst2BI	CACGAG	1 cut(s)	14
Bst2UI	CCWGG	3 cut(s)	570, 1744, 1914
Bst4CI	ACNGT	7 cut(s)	203, 268, 416, 561, 821, 944, 2060
Bst6I	CTCTTC	2 cut(s)	2550, 2586
BstACI	GRCGYC	2 cut(s)	499, 714
BstAPI	GCANNNNNTGC	1 cut(s)	2303
BstC8I	GCNNGC	4 cut(s)	1431, 1550, 2230, 2586
BstDSI	CCRYGG	1 cut(s)	331
BstF5I	GGATG	8 cut(s)	64, 147, 640, 1000, 1808, 1940, 2227, 2673
BstFNI	CGCG	2 cut(s)	1823, 2410
BstH2I	RGCGCY	2 cut(s)	717, 2476
BstHHI	GCGC	4 cut(s)	716, 1823, 2364, 2475
BstKTI	GATC	9 cut(s)	1013, 1152, 1183, 1358, 1563, 1897, 1936, 2512, 2609
BstMAI	GTCTC	1 cut(s)	660
BstMBI	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
BstMWI	GCNNNNNNNGC	9 cut(s)	342, 1049, 1937, 1959, 2138, 2141, 2303, 2396, 2497
BstNI	CCWGG	3 cut(s)	570, 1744, 1914
BstNSI	RCATGY	3 cut(s)	1280, 2264, 2734
BstSCI	CCNGG	5 cut(s)	521, 568, 982, 1742, 1912
BstSFI	CTRYAG	2 cut(s)	1866, 2122
BstSLI	GKGCMC	2 cut(s)	893, 1284
BstUI	CGCG	2 cut(s)	1823, 2410
BstV2I	GAAGAC	2 cut(s)	269, 2097
BstX2I	RGATCY	4 cut(s)	1010, 1180, 1894, 2606
BstYI	RGATCY	4 cut(s)	1010, 1180, 1894, 2606
BstZ17I	GTATAC	1 cut(s)	322
Bsu15I	ATCGAT	2 cut(s)	1258, 1354
Bsu36I	CCTNAGG	1 cut(s)	2217
BsuI	GTATCC	1 cut(s)	2101
BsuRI	GGCC	4 cut(s)	891, 1811, 2627, 2718
BsuTUI	ATCGAT	2 cut(s)	1258, 1354
BtgI	CCRYGG	1 cut(s)	331
BtgZI	GCGATG	1 cut(s)	1230
BtrI	CACGTC	1 cut(s)	1799
BtsCI	GGATG	8 cut(s)	64, 147, 640, 1000, 1808, 1940, 2227, 2673
BtsI	GCAGTG	1 cut(s)	1923
BtsIMutI	CAGTG	8 cut(s)	168, 836, 996, 1008, 1152, 1595, 1923, 2089
BveI	ACCTGC	1 cut(s)	1120
Cac8I	GCNNGC	4 cut(s)	1431, 1550, 2230, 2586
CaiI	CAGNNNCTG	3 cut(s)	838, 2135, 2303
CciI	TCATGA	2 cut(s)	280, 595
CfoI	GCGC	4 cut(s)	716, 1823, 2364, 2475
Cfr13I	GGNCC	5 cut(s)	481, 889, 890, 1810, 2717
ClaI	ATCGAT	2 cut(s)	1258, 1354
CseI	GACGC	1 cut(s)	488
Csp6I	GTAC	5 cut(s)	1268, 1337, 2068, 2328, 2419
CviQI	GTAC	5 cut(s)	1268, 1337, 2068, 2328, 2419
DinI	GGCGCC	1 cut(s)	715
DpnI	GATC	9 cut(s)	1012, 1151, 1182, 1357, 1562, 1896, 1935, 2511, 2608
DpnII	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
Eam1104I	CTCTTC	2 cut(s)	2550, 2586
EarI	CTCTTC	2 cut(s)	2550, 2586
EciI	GGCGGA	1 cut(s)	89
Eco130I	CCWWGG	2 cut(s)	331, 494
Eco24I	GRGCYC	1 cut(s)	893
Eco32I	GATATC	1 cut(s)	616
Eco47I	GGWCC	1 cut(s)	481
Eco57I	CTGAAG	9 cut(s)	205, 768, 1371, 1887, 2123, 2149, 2486, 2610, 2706
Eco81I	CCTNAGG	1 cut(s)	2217
EcoO109I	RGGNCCY	2 cut(s)	889, 890
EcoRI	GAATTC	2 cut(s)	451, 853
EcoRII	CCWGG	3 cut(s)	568, 1742, 1912
EcoRV	GATATC	1 cut(s)	616
EcoT14I	CCWWGG	2 cut(s)	331, 494
EcoT22I	ATGCAT	1 cut(s)	2266
EcoT38I	GRGCYC	1 cut(s)	893
EgeI	GGCGCC	1 cut(s)	715
EheI	GGCGCC	1 cut(s)	715
ErhI	CCWWGG	2 cut(s)	331, 494
FalI	AAGNNNNNCTT	4 cut(s)	1868, 1900, 2337, 2369
FaqI	GGGAC	1 cut(s)	538
FauI	CCCGC	1 cut(s)	2610
FauNDI	CATATG	1 cut(s)	652
FbaI	TGATCA	2 cut(s)	1149, 1560
FblI	GTMKAC	1 cut(s)	321
FokI	GGATG	8 cut(s)	71, 134, 647, 1007, 1815, 1927, 2234, 2680
FriOI	GRGCYC	1 cut(s)	893
FspBI	CTAG	5 cut(s)	389, 468, 732, 1476, 1733
GlaI	GCGC	4 cut(s)	715, 1822, 2363, 2474
GsuI	CTGGAG	3 cut(s)	420, 860, 1032
HaeII	RGCGCY	2 cut(s)	717, 2476
HaeIII	GGCC	4 cut(s)	891, 1811, 2627, 2718
HapII	CCGG	3 cut(s)	358, 522, 983
HgaI	GACGC	1 cut(s)	488
HhaI	GCGC	4 cut(s)	716, 1823, 2364, 2475
Hin1I	GRCGYC	2 cut(s)	499, 714
Hin6I	GCGC	4 cut(s)	714, 1821, 2362, 2473
HinP1I	GCGC	4 cut(s)	714, 1821, 2362, 2473
HincII	GTYRAC	2 cut(s)	64, 1579
HindII	GTYRAC	2 cut(s)	64, 1579
HindIII	AAGCTT	1 cut(s)	1459
HpaII	CCGG	3 cut(s)	358, 522, 983
HphI	GGTGA	5 cut(s)	136, 857, 862, 1101, 1479
Hpy166II	GTNNAC	6 cut(s)	64, 166, 322, 740, 1294, 1579
Hpy8I	GTNNAC	6 cut(s)	64, 166, 322, 740, 1294, 1579
HpyAV	CCTTC	7 cut(s)	1395, 1823, 1830, 1942, 2098, 2173, 2410
HpyCH4III	ACNGT	7 cut(s)	203, 268, 416, 561, 821, 944, 2060
HpyCH4IV	ACGT	2 cut(s)	1798, 2341
HpyF10VI	GCNNNNNNNGC	9 cut(s)	342, 1049, 1937, 1959, 2138, 2141, 2303, 2396, 2497
HpySE526I	ACGT	2 cut(s)	1798, 2341
Hsp92I	GRCGYC	2 cut(s)	499, 714
HspAI	GCGC	4 cut(s)	714, 1821, 2362, 2473
KasI	GGCGCC	1 cut(s)	713
Kpn2I	TCCGGA	1 cut(s)	357
Ksp22I	TGATCA	2 cut(s)	1149, 1560
Kzo9I	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
LguI	GCTCTTC	1 cut(s)	2586
LmnI	GCTCC	4 cut(s)	102, 496, 612, 2642
LweI	GCATC	5 cut(s)	198, 1413, 1481, 1949, 2128
MaeI	CTAG	5 cut(s)	389, 468, 732, 1476, 1733
MaeII	ACGT	2 cut(s)	1798, 2341
MaeIII	GTNAC	3 cut(s)	646, 1370, 1888
MalI	GATC	9 cut(s)	1012, 1151, 1182, 1357, 1562, 1896, 1935, 2511, 2608
MbiI	CCGCTC	2 cut(s)	13, 2637
MboI	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
MfeI	CAATTG	1 cut(s)	1569
MflI	RGATCY	4 cut(s)	1010, 1180, 1894, 2606
MhlI	GDGCHC	2 cut(s)	893, 1284
Mly113I	GGCGCC	1 cut(s)	714
MlyI	GAGTC	4 cut(s)	394, 512, 971, 2448
MmeI	TCCRAC	2 cut(s)	1635, 2422
Mph1103I	ATGCAT	1 cut(s)	2266
MroI	TCCGGA	1 cut(s)	357
MroXI	GAANNNNTTC	5 cut(s)	312, 874, 1062, 1239, 1298
MseI	TTAA	6 cut(s)	588, 885, 2114, 2186, 2355, 2477
MslI	CAYNNNNRTG	6 cut(s)	71, 414, 446, 628, 1114, 1722
MspA1I	CMGCKG	3 cut(s)	746, 2132, 2300
MspI	CCGG	3 cut(s)	358, 522, 983
MspR9I	CCNGG	5 cut(s)	523, 570, 984, 1744, 1914
MunI	CAATTG	1 cut(s)	1569
MvaI	CCWGG	3 cut(s)	570, 1744, 1914
MvnI	CGCG	2 cut(s)	1823, 2410
MwoI	GCNNNNNNNGC	9 cut(s)	342, 1049, 1937, 1959, 2138, 2141, 2303, 2396, 2497
NarI	GGCGCC	1 cut(s)	714
NciI	CCSGG	2 cut(s)	523, 984
NcoI	CCATGG	1 cut(s)	331
NdeI	CATATG	1 cut(s)	652
NdeII	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
NmuCI	GTSAC	1 cut(s)	1888
NsiI	ATGCAT	1 cut(s)	2266
NspI	RCATGY	3 cut(s)	1280, 2264, 2734
OliI	CACNNNNGTG	2 cut(s)	446, 1722
PagI	TCATGA	2 cut(s)	280, 595
PaqCI	CACCTGC	1 cut(s)	1120
PciI	ACATGT	1 cut(s)	1276
PciSI	GCTCTTC	1 cut(s)	2586
PdmI	GAANNNNTTC	5 cut(s)	312, 874, 1062, 1239, 1298
PflMI	CCANNNNNTGG	1 cut(s)	1007
PfoI	TCCNGGA	1 cut(s)	521
PleI	GAGTC	4 cut(s)	393, 512, 971, 2447
PluTI	GGCGCC	1 cut(s)	717
PpsI	GAGTC	4 cut(s)	393, 512, 971, 2447
PscI	ACATGT	1 cut(s)	1276
Psp6I	CCWGG	3 cut(s)	568, 1742, 1912
PspGI	CCWGG	3 cut(s)	568, 1742, 1912
PspOMI	GGGCCC	1 cut(s)	889
PspPI	GGNCC	5 cut(s)	481, 889, 890, 1810, 2717
PstI	CTGCAG	1 cut(s)	1870
PstNI	CAGNNNCTG	3 cut(s)	838, 2135, 2303
PsuI	RGATCY	4 cut(s)	1010, 1180, 1894, 2606
PvuII	CAGCTG	3 cut(s)	746, 2132, 2300
RsaI	GTAC	5 cut(s)	1269, 1338, 2069, 2329, 2420
RsaNI	GTAC	5 cut(s)	1268, 1337, 2068, 2328, 2419
RseI	CAYNNNNRTG	6 cut(s)	71, 414, 446, 628, 1114, 1722
SapI	GCTCTTC	1 cut(s)	2586
SaqAI	TTAA	6 cut(s)	588, 885, 2114, 2186, 2355, 2477
Sau3AI	GATC	9 cut(s)	1010, 1149, 1180, 1355, 1560, 1894, 1933, 2509, 2606
Sau96I	GGNCC	5 cut(s)	481, 889, 890, 1810, 2717
ScaI	AGTACT	1 cut(s)	2069
SchI	GAGTC	4 cut(s)	394, 512, 971, 2448
ScrFI	CCNGG	5 cut(s)	523, 570, 984, 1744, 1914
SduI	GDGCHC	2 cut(s)	893, 1284
SfaNI	GCATC	5 cut(s)	198, 1413, 1481, 1949, 2128
SfcI	CTRYAG	2 cut(s)	1866, 2122
SfoI	GGCGCC	1 cut(s)	715
SinI	GGWCC	1 cut(s)	481
SmiMI	CAYNNNNRTG	6 cut(s)	71, 414, 446, 628, 1114, 1722
SmlI	CTYRAG	1 cut(s)	2450
SmoI	CTYRAG	1 cut(s)	2450
SpeI	ACTAGT	1 cut(s)	731
SsiI	CCGC	9 cut(s)	11, 100, 1426, 1823, 2410, 2422, 2467, 2617, 2635
SspDI	GGCGCC	1 cut(s)	713
SspI	AATATT	2 cut(s)	1089, 1556
SspMI	CTAG	5 cut(s)	389, 468, 732, 1476, 1733
StyD4I	CCNGG	5 cut(s)	521, 568, 982, 1742, 1912
StyI	CCWWGG	2 cut(s)	331, 494
TaaI	ACNGT	7 cut(s)	203, 268, 416, 561, 821, 944, 2060
TaiI	ACGT	2 cut(s)	1801, 2344
TaqI	TCGA	4 cut(s)	1258, 1354, 1753, 2395
TaqII	GACCGA	1 cut(s)	989
TatI	WGTACW	2 cut(s)	1336, 2067
TauI	GCSGC	2 cut(s)	1429, 1826
Tru1I	TTAA	6 cut(s)	588, 885, 2114, 2186, 2355, 2477
Tru9I	TTAA	6 cut(s)	588, 885, 2114, 2186, 2355, 2477
TscAI	CASTG	8 cut(s)	168, 843, 996, 1008, 1159, 1602, 1930, 2089
TseFI	GTSAC	1 cut(s)	1888
Tsp45I	GTSAC	1 cut(s)	1888
TspGWI	ACGGA	3 cut(s)	887, 1778, 2315
TspRI	CASTG	8 cut(s)	168, 843, 996, 1008, 1159, 1602, 1930, 2089
Van91I	CCANNNNNTGG	1 cut(s)	1007
VpaK11BI	GGWCC	1 cut(s)	481
XapI	RAATTY	7 cut(s)	111, 451, 463, 853, 1342, 2379, 2427
XbaI	TCTAGA	2 cut(s)	388, 1732
XceI	RCATGY	3 cut(s)	1280, 2264, 2734
XcmI	CCANNNNNNNNNTGG	1 cut(s)	492
XmiI	GTMKAC	1 cut(s)	321
XmnI	GAANNNNTTC	5 cut(s)	312, 874, 1062, 1239, 1298
XspI	CTAG	5 cut(s)	389, 468, 732, 1476, 1733
ZrmI	AGTACT	1 cut(s)	2069
Zsp2I	ATGCAT	1 cut(s)	2266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.