Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006328

Physical Location & Seq

Genomic Coordinates Forward (+)

50049131 .. 50056720

Gene Structure 7590 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39370

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGGACAAACCGCTCGTGGGTTCTGAGATTCATGGATTTCATACAATGCAAGGGTATTTGGATGTTGACACTATTATGGAGGAAGCCAAAGGACGATGGCTCCGCCCAAACGAAATTCATGCAATACTCTATAATTACAAGTATTTCACCATCCATGTCAAGCCAGTGAACTTGCCCAAAAGTGGCACCATTGTATTGTTTGACCGTAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAAAAAAGATGGGAAGACAGTCAAAGAAGCTCATGAACACTTGAAAGTTGGTAATGAAGAAAGGATTCATGTATACTATGCCCATGGCGAGGATAGCCCAACCTTTGTCCGGAGGTGTTATTGGCTGCTTGATAAGAGTCTAGAACACATAGTCCTTGTTCATTACCGTGAAACACAAGAGTTGCAGGGTTCTCCAGCCACACCTGTGAATTCCAATTCCAATTCCAATTCAAATTCTAGTTCTATCTCAGACCCATCTGCTCCTTGGCGTCTATCAGAAGAACTTGACTCCGGGGCTAACAATTCATATTATGGTGGTGCAAATGAACTTTTAGAGCCTGGTATCGGTTTGAATGTTAATAATCATGAACAAAGGCTCCATGATATCAATACACTTGAATGGGATGAGCTTTTGGTTACATATGATTCCAAAGGAGACAAAGTTTCAGGCTTTGACCAGCAGAATCAACTTGTGGGAAGTGGCGCCATAAGTGGTGGCCCCTGTGATTCCTCGGACATTTTGGGTAATGATGGATTGCGTAGTCAGGACAGTTTTGGGAGGTGGATAAACCAGATTATGACCAACTCTCCGGGTTCAGTGGATGACTCAGTGCTTGAATCCTCATTTCCACCTTCTCAGAGTTCATTTGCTTCTCCAGCAATGGAACATATTCAATCTTCTGTTCCTGAGCAAATATTTATCATAACCGATGTTTCACCTGCATGGGCTTTCTCAAATGAGAAAACAAAGATTCTGATCACTGGCTTCTTTCATCAAGAGGTTTTGGATCTTGCGAAGTCCAATCTACTTTGTATCTGTGGCGATGTATGTATTCCTGCTGAAATTGTTCAGGTTGGGGTATATCGATGTTTCATACCACCACATGTGCCCAGATTTGTGAACCTTTTCATTAGTCTTGATGGTCAAAAACCCATCAGCCAAATACAAAATTTTGAATATCGATCTCCTGTAATGAGTAACTTAGTAGTTCCTTCAGGAGAGAACAAATTGGAAGAGTTCCAATTACAGATGCGGCTTGCTCATTTGCTTTTCTCATCATCTAAAAGCTTGAACATTGCATCTAGTAAAGTATCACCACATACCCTCAAAGAAGCCAAGAAGTTTTCCCATAGAACTTCTCACATATCAAATAGCTGGCAATATTTGATCAAGTCAATTGAAGTCAACAGTACTCCTTTACCACTGGCAAAGGATAGTTTGTTTGAACTTATTTTGAAGAACAGACTAAAAGATTGGCTGTTGGAGAAAGTTCTTGACAGCTCTAAAACCAAAGAATGTGATGGTCATGGTCAAGGAGTAATCCACTTATGTGCTATTCTAGATTATACCTGGGCTGTTCGATTGTTTTCATGGTCTGGCTTGTCATTAGACTTTCGTGATAGACGTGGATGGACGGCCCTTCATTGGGCAGCATATCATGGAAGGGAGAAAATGGTTGCAGTTCTATTATCTGCAGGGGCAAAGCCAAACTTGGTCACAGATCCCACTTCAGAAAACCCTGGTGGTTGCACTGCTGCTGATCTTGCATTCATGAAGGGTTATGAAGGATTAGCAGCTTATCTTTCAGAAAAGGCTTTGCTAAAACAATTTGAGGACATGAGTATAGCTGGAAATGTTAGTGGTTCCCTCCAAACTAACACAAACTGTTATCAGCACTCTGAGAATCTCAGTGAGGAAGACCTGTATCTGAACGATACTTTAACAGCCTATAGGACAGCTGCTGATGCAGCAGCACGAATACAAGCTGCCTTCAGGGAAAACGCACTAAAATTAAAGGCTAAAGCTGTTGAATCTTACAGTCCTGAGGATGAAGCACGCAGTATAATTGCAGCATTGAAGATTCAACATGCATTTCGCCACTATGATGCACGAAAAAAGATGGCAGCTGCTGCCCGTATTCAATATAGGTTCCGTACATGGAAGATACGTCAAGAGTTCCTTAATATGCGCCGTCAAGCTGTCAAAATTCAAGCTGCTTTTCGAGCCTTCCAAACGCGGAAGCAGTACCGCAAAATCCTATGGGGAGTCGGAGTGCTTGAGAAAGCTGTTCTGCGGTGGCGCTTAAAGAGAAAAGGGCTTCGGGGGCTTCAGGTTGATCCCATTGAAGCTGATGGAGATGATAAGCAGGAAAGTGATACTGAAGAGGACTTCTACCGAAACAGCCGAAAACAAGCTGAAGAGCGTGTTGAGAGATCCATTGTGCGGGTTCAGGCCATGTTCCGCTCCAAAAAAGCACAGCAAGAATATAGTAGGATGAAGTTGGCTCATACTGAAGCAAAGCTGGAATATGAAGATATTTTCGACCCTGACAATAACATGCGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

866

Amino Acids

98.18

Weight (kDa)

7.65

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	28 - 141	2.1e-46	CG-1 domain
Ank_2	PF12796	512 - 582	1.2e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	525 - 615	5.7e-08	Ankyrin repeats (3 copies)
Ank	PF00023	554 - 584	2.5e-07	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16940 AT3G16940 AT3G16940
fragaria_vesca	FvH4_4g19400 FvH4_4g19400
malus_domestica	MD16G1157900.v1.1
prunus_persica	Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1
pyrus_communis	pycom13g13450 pycom16g13290
rosa_chinensis	RchiOBHm_Chr4g0424431
rosa_laevigata	RLG00000007475
rosa_multiflora	Rmu_sc0003567.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366370
rosa_rugosa	Rorug04G0197700 Rorug04G0197800
rosa_samantha	Rh4AG253800 Rh4BG259100 Rh4CG270400 Rh4DG253600
rosa_wichuraiana	Rw4G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	979
Acc36I	ACCTGC	1 cut(s)	979
AccB1I	GGYRCC	2 cut(s)	185, 734
AccBSI	CCGCTC	2 cut(s)	13, 2496
AccI	GTMKAC	1 cut(s)	324
AccII	CGCG	1 cut(s)	2269
AccIII	TCCGGA	1 cut(s)	360
AciI	CCGC	8 cut(s)	11, 103, 1285, 2269, 2281, 2326, 2476, 2494
AclWI	GGATC	4 cut(s)	1047, 1748, 2363, 2460
AcsI	RAATTY	5 cut(s)	114, 460, 484, 1201, 2238
AcuI	CTGAAG	8 cut(s)	208, 1230, 1746, 2008, 2345, 2433, 2469, 2565
AcyI	GRCGYC	2 cut(s)	520, 735
AfaI	GTAC	3 cut(s)	1444, 2188, 2279
AfiI	CCNNNNNNNGG	8 cut(s)	17, 182, 340, 360, 596, 1677, 1678, 2475
AflIII	ACRYGT	1 cut(s)	1135
AjiI	CACGTC	1 cut(s)	1658
AjnI	CCWGG	3 cut(s)	589, 1601, 1771
AleI	CACNNNNGTG	2 cut(s)	455, 1581
AloI	GAACNNNNNNTCC	4 cut(s)	387, 419, 612, 644
Alw26I	GTCTC	1 cut(s)	681
AlwI	GGATC	4 cut(s)	1047, 1748, 2363, 2460
AlwNI	CAGNNNCTG	2 cut(s)	1994, 2162
Aor13HI	TCCGGA	1 cut(s)	360
AoxI	GGCC	3 cut(s)	748, 1668, 2484
ApoI	RAATTY	5 cut(s)	114, 460, 484, 1201, 2238
Asp700I	GAANNNNTTC	4 cut(s)	315, 921, 1098, 1157
AspLEI	GCGC	3 cut(s)	737, 2223, 2334
AspS9I	GGNCC	2 cut(s)	749, 1669
AsuC2I	CCSGG	2 cut(s)	544, 843
AsuHPI	GGTGA	3 cut(s)	139, 960, 1338
AxyI	CCTNAGG	1 cut(s)	2076
BaeGI	GKGCMC	1 cut(s)	1143
BanI	GGYRCC	2 cut(s)	185, 734
BauI	CACGAG	1 cut(s)	14
BbsI	GAAGAC	2 cut(s)	272, 1956
BceAI	ACGGC	2 cut(s)	1683, 2208
BcgI	CGANNNNNNTGC	2 cut(s)	101, 135
BciT130I	CCWGG	3 cut(s)	591, 1603, 1773
BclI	TGATCA	2 cut(s)	1008, 1419
BcnI	CCSGG	2 cut(s)	544, 843
BcoDI	GTCTC	1 cut(s)	681
BfaI	CTAG	4 cut(s)	392, 489, 1335, 1592
BfmI	CTRYAG	2 cut(s)	1725, 1981
BfoI	RGCGCY	2 cut(s)	738, 2335
BfuAI	ACCTGC	1 cut(s)	979
BmcAI	AGTACT	1 cut(s)	1444
Bme1390I	CCNGG	5 cut(s)	544, 591, 843, 1603, 1773
BmgBI	CACGTC	1 cut(s)	1658
BmgT120I	GGNCC	2 cut(s)	749, 1669
BmiI	GGNNCC	7 cut(s)	101, 187, 629, 736, 751, 1897, 2183
BmrFI	CCNGG	5 cut(s)	544, 591, 843, 1603, 1773
BmsI	GCATC	5 cut(s)	201, 1272, 1340, 1987, 2128
BpiI	GAAGAC	2 cut(s)	272, 1956
BpmI	CTGGAG	2 cut(s)	429, 891
Bpu10I	CCTNAGC	1 cut(s)	939
BpuEI	CTTGAG	1 cut(s)	2330
BpuMI	CCSGG	2 cut(s)	544, 843
Bsa29I	ATCGAT	2 cut(s)	1117, 1213
BsaBI	GATNNNNATC	1 cut(s)	1007
BsaHI	GRCGYC	2 cut(s)	520, 735
BsaJI	CCNNGG	6 cut(s)	334, 515, 543, 762, 1602, 1771
BsaWI	WCCGGW	1 cut(s)	360
Bsc4I	CCNNNNNNNGG	8 cut(s)	17, 182, 340, 360, 596, 1677, 1678, 2475
Bse1I	ACTGG	4 cut(s)	164, 248, 1018, 1461
Bse21I	CCTNAGG	1 cut(s)	2076
Bse3DI	GCAATG	2 cut(s)	918, 1326
Bse8I	GATNNNNATC	1 cut(s)	1007
BseAI	TCCGGA	1 cut(s)	360
BseBI	CCWGG	3 cut(s)	591, 1603, 1773
BseCI	ATCGAT	2 cut(s)	1117, 1213
BseDI	CCNNGG	6 cut(s)	334, 515, 543, 762, 1602, 1771
BseGI	GGATG	7 cut(s)	67, 150, 661, 859, 1667, 2086, 2532
BseJI	GATNNNNATC	1 cut(s)	1007
BseLI	CCNNNNNNNGG	8 cut(s)	17, 182, 340, 360, 596, 1677, 1678, 2475
BseMI	GCAATG	2 cut(s)	918, 1326
BseMII	CTCAG	8 cut(s)	15, 513, 873, 902, 930, 1923, 1954, 2067
BseNI	ACTGG	4 cut(s)	164, 248, 1018, 1461
BseSI	GKGCMC	1 cut(s)	1143
Bsh1236I	CGCG	1 cut(s)	2269
BshFI	GGCC	3 cut(s)	750, 1670, 2486
BshNI	GGYRCC	2 cut(s)	185, 734
BshVI	ATCGAT	2 cut(s)	1117, 1213
BsiSI	CCGG	3 cut(s)	361, 543, 842
BslI	CCNNNNNNNGG	8 cut(s)	17, 182, 340, 360, 596, 1677, 1678, 2475
BsmAI	GTCTC	1 cut(s)	681
BsmI	GAATGC	1 cut(s)	1799
BsnI	GGCC	3 cut(s)	750, 1670, 2486
Bsp1286I	GDGCHC	1 cut(s)	1143
Bsp13I	TCCGGA	1 cut(s)	360
Bsp143I	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
Bsp19I	CCATGG	1 cut(s)	334
BspACI	CCGC	8 cut(s)	11, 103, 1285, 2269, 2281, 2326, 2476, 2494
BspANI	GGCC	3 cut(s)	750, 1670, 2486
BspCNI	CTCAG	8 cut(s)	16, 512, 872, 901, 931, 1924, 1953, 2068
BspDI	ATCGAT	2 cut(s)	1117, 1213
BspEI	TCCGGA	1 cut(s)	360
BspFNI	CGCG	1 cut(s)	2269
BspHI	TCATGA	3 cut(s)	283, 616, 1803
BspLI	GGNNCC	7 cut(s)	101, 187, 629, 736, 751, 1897, 2183
BspMAI	CTGCAG	1 cut(s)	1729
BspMI	ACCTGC	1 cut(s)	979
BspPI	GGATC	4 cut(s)	1047, 1748, 2363, 2460
BspQI	GCTCTTC	1 cut(s)	2445
BspT107I	GGYRCC	2 cut(s)	185, 734
BsrBI	CCGCTC	2 cut(s)	13, 2496
BsrDI	GCAATG	2 cut(s)	918, 1326
BsrI	ACTGG	4 cut(s)	164, 248, 1018, 1461
BssECI	CCNNGG	6 cut(s)	334, 515, 543, 762, 1602, 1771
BssMI	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
BssNAI	GTATAC	1 cut(s)	325
BssNI	GRCGYC	2 cut(s)	520, 735
BssSI	CACGAG	1 cut(s)	14
BssT1I	CCWWGG	2 cut(s)	334, 515
Bst1107I	GTATAC	1 cut(s)	325
Bst2BI	CACGAG	1 cut(s)	14
Bst2UI	CCWGG	3 cut(s)	591, 1603, 1773
Bst4CI	ACNGT	7 cut(s)	206, 271, 419, 803, 1442, 1919, 2072
Bst6I	CTCTTC	3 cut(s)	1260, 2409, 2445
BstACI	GRCGYC	2 cut(s)	520, 735
BstAPI	GCANNNNNTGC	1 cut(s)	2162
BstC8I	GCNNGC	3 cut(s)	1290, 1409, 2089
BstDSI	CCRYGG	1 cut(s)	334
BstF5I	GGATG	7 cut(s)	67, 150, 661, 859, 1667, 2086, 2532
BstFNI	CGCG	1 cut(s)	2269
BstH2I	RGCGCY	2 cut(s)	738, 2335
BstHHI	GCGC	3 cut(s)	737, 2223, 2334
BstKTI	GATC	8 cut(s)	1011, 1042, 1217, 1422, 1756, 1795, 2371, 2468
BstMAI	GTCTC	1 cut(s)	681
BstMBI	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
BstMWI	GCNNNNNNNGC	8 cut(s)	345, 908, 1796, 1997, 2000, 2162, 2255, 2356
BstNI	CCWGG	3 cut(s)	591, 1603, 1773
BstNSI	RCATGY	3 cut(s)	1139, 2123, 2593
BstSCI	CCNGG	5 cut(s)	542, 589, 841, 1601, 1771
BstSFI	CTRYAG	2 cut(s)	1725, 1981
BstSLI	GKGCMC	1 cut(s)	1143
BstUI	CGCG	1 cut(s)	2269
BstV2I	GAAGAC	2 cut(s)	272, 1956
BstX2I	RGATCY	3 cut(s)	1039, 1753, 2465
BstYI	RGATCY	3 cut(s)	1039, 1753, 2465
BstZ17I	GTATAC	1 cut(s)	325
Bsu15I	ATCGAT	2 cut(s)	1117, 1213
Bsu36I	CCTNAGG	1 cut(s)	2076
BsuRI	GGCC	3 cut(s)	750, 1670, 2486
BsuTUI	ATCGAT	2 cut(s)	1117, 1213
BtgI	CCRYGG	1 cut(s)	334
BtgZI	GCGATG	1 cut(s)	1089
BtrI	CACGTC	1 cut(s)	1658
BtsCI	GGATG	7 cut(s)	67, 150, 661, 859, 1667, 2086, 2532
BtsI	GCAGTG	1 cut(s)	1782
BtsIMutI	CAGTG	7 cut(s)	171, 855, 867, 1011, 1454, 1782, 1948
BveI	ACCTGC	1 cut(s)	979
Cac8I	GCNNGC	3 cut(s)	1290, 1409, 2089
CaiI	CAGNNNCTG	2 cut(s)	1994, 2162
CciI	TCATGA	3 cut(s)	283, 616, 1803
CfoI	GCGC	3 cut(s)	737, 2223, 2334
Cfr13I	GGNCC	2 cut(s)	749, 1669
ClaI	ATCGAT	2 cut(s)	1117, 1213
CseI	GACGC	1 cut(s)	509
Csp6I	GTAC	3 cut(s)	1443, 2187, 2278
CviQI	GTAC	3 cut(s)	1443, 2187, 2278
DinI	GGCGCC	1 cut(s)	736
DpnI	GATC	8 cut(s)	1010, 1041, 1216, 1421, 1755, 1794, 2370, 2467
DpnII	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
Eam1104I	CTCTTC	3 cut(s)	1260, 2409, 2445
EarI	CTCTTC	3 cut(s)	1260, 2409, 2445
EciI	GGCGGA	1 cut(s)	92
Eco130I	CCWWGG	2 cut(s)	334, 515
Eco32I	GATATC	1 cut(s)	637
Eco57I	CTGAAG	8 cut(s)	208, 1230, 1746, 2008, 2345, 2433, 2469, 2565
Eco81I	CCTNAGG	1 cut(s)	2076
EcoRI	GAATTC	1 cut(s)	460
EcoRII	CCWGG	3 cut(s)	589, 1601, 1771
EcoRV	GATATC	1 cut(s)	637
EcoT14I	CCWWGG	2 cut(s)	334, 515
EcoT22I	ATGCAT	1 cut(s)	2125
EgeI	GGCGCC	1 cut(s)	736
EheI	GGCGCC	1 cut(s)	736
ErhI	CCWWGG	2 cut(s)	334, 515
FalI	AAGNNNNNCTT	4 cut(s)	1727, 1759, 2196, 2228
FauI	CCCGC	1 cut(s)	2469
FauNDI	CATATG	1 cut(s)	673
FbaI	TGATCA	2 cut(s)	1008, 1419
FblI	GTMKAC	1 cut(s)	324
FokI	GGATG	7 cut(s)	74, 137, 668, 866, 1674, 2093, 2539
FspBI	CTAG	4 cut(s)	392, 489, 1335, 1592
GlaI	GCGC	3 cut(s)	736, 2222, 2333
GsuI	CTGGAG	2 cut(s)	429, 891
HaeII	RGCGCY	2 cut(s)	738, 2335
HaeIII	GGCC	3 cut(s)	750, 1670, 2486
HapII	CCGG	3 cut(s)	361, 543, 842
HgaI	GACGC	1 cut(s)	509
HhaI	GCGC	3 cut(s)	737, 2223, 2334
Hin1I	GRCGYC	2 cut(s)	520, 735
Hin6I	GCGC	3 cut(s)	735, 2221, 2332
HinP1I	GCGC	3 cut(s)	735, 2221, 2332
HincII	GTYRAC	2 cut(s)	67, 1438
HindII	GTYRAC	2 cut(s)	67, 1438
HindIII	AAGCTT	1 cut(s)	1318
HpaII	CCGG	3 cut(s)	361, 543, 842
HphI	GGTGA	3 cut(s)	139, 960, 1338
Hpy166II	GTNNAC	5 cut(s)	67, 169, 325, 1153, 1438
Hpy8I	GTNNAC	5 cut(s)	67, 169, 325, 1153, 1438
HpyAV	CCTTC	8 cut(s)	894, 1254, 1682, 1689, 1801, 1811, 2032, 2269
HpyCH4III	ACNGT	7 cut(s)	206, 271, 419, 803, 1442, 1919, 2072
HpyCH4IV	ACGT	2 cut(s)	1657, 2200
HpyF10VI	GCNNNNNNNGC	8 cut(s)	345, 908, 1796, 1997, 2000, 2162, 2255, 2356
HpySE526I	ACGT	2 cut(s)	1657, 2200
Hsp92I	GRCGYC	2 cut(s)	520, 735
HspAI	GCGC	3 cut(s)	735, 2221, 2332
KasI	GGCGCC	1 cut(s)	734
Kpn2I	TCCGGA	1 cut(s)	360
Ksp22I	TGATCA	2 cut(s)	1008, 1419
Kzo9I	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
LguI	GCTCTTC	1 cut(s)	2445
LmnI	GCTCC	4 cut(s)	105, 517, 633, 2501
LweI	GCATC	5 cut(s)	201, 1272, 1340, 1987, 2128
MaeI	CTAG	4 cut(s)	392, 489, 1335, 1592
MaeII	ACGT	2 cut(s)	1657, 2200
MaeIII	GTNAC	3 cut(s)	667, 1229, 1747
MalI	GATC	8 cut(s)	1010, 1041, 1216, 1421, 1755, 1794, 2370, 2467
MbiI	CCGCTC	2 cut(s)	13, 2496
MboI	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
MfeI	CAATTG	1 cut(s)	1428
MflI	RGATCY	3 cut(s)	1039, 1753, 2465
MhlI	GDGCHC	1 cut(s)	1143
Mly113I	GGCGCC	1 cut(s)	735
MlyI	GAGTC	4 cut(s)	397, 533, 851, 2307
MmeI	TCCRAC	2 cut(s)	1494, 2281
Mph1103I	ATGCAT	1 cut(s)	2125
MroI	TCCGGA	1 cut(s)	360
MroXI	GAANNNNTTC	4 cut(s)	315, 921, 1098, 1157
MseI	TTAA	5 cut(s)	609, 1973, 2045, 2214, 2336
MslI	CAYNNNNRTG	7 cut(s)	74, 417, 455, 649, 973, 1581, 2136
MspA1I	CMGCKG	2 cut(s)	1991, 2159
MspI	CCGG	3 cut(s)	361, 543, 842
MspR9I	CCNGG	5 cut(s)	544, 591, 843, 1603, 1773
MunI	CAATTG	1 cut(s)	1428
Mva1269I	GAATGC	1 cut(s)	1799
MvaI	CCWGG	3 cut(s)	591, 1603, 1773
MvnI	CGCG	1 cut(s)	2269
MwoI	GCNNNNNNNGC	8 cut(s)	345, 908, 1796, 1997, 2000, 2162, 2255, 2356
NarI	GGCGCC	1 cut(s)	735
NciI	CCSGG	2 cut(s)	544, 843
NcoI	CCATGG	1 cut(s)	334
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
NlaIV	GGNNCC	7 cut(s)	101, 187, 629, 736, 751, 1897, 2183
NmuCI	GTSAC	1 cut(s)	1747
NsiI	ATGCAT	1 cut(s)	2125
NspI	RCATGY	3 cut(s)	1139, 2123, 2593
OliI	CACNNNNGTG	2 cut(s)	455, 1581
PagI	TCATGA	3 cut(s)	283, 616, 1803
PaqCI	CACCTGC	1 cut(s)	979
PciI	ACATGT	1 cut(s)	1135
PciSI	GCTCTTC	1 cut(s)	2445
PcsI	WCGNNNNNNNCGW	1 cut(s)	1654
PctI	GAATGC	1 cut(s)	1799
PdmI	GAANNNNTTC	4 cut(s)	315, 921, 1098, 1157
PleI	GAGTC	4 cut(s)	396, 533, 851, 2306
PluTI	GGCGCC	1 cut(s)	738
PpsI	GAGTC	4 cut(s)	396, 533, 851, 2306
PscI	ACATGT	1 cut(s)	1135
Psp6I	CCWGG	3 cut(s)	589, 1601, 1771
PspGI	CCWGG	3 cut(s)	589, 1601, 1771
PspN4I	GGNNCC	7 cut(s)	101, 187, 629, 736, 751, 1897, 2183
PspPI	GGNCC	2 cut(s)	749, 1669
PstI	CTGCAG	1 cut(s)	1729
PstNI	CAGNNNCTG	2 cut(s)	1994, 2162
PsuI	RGATCY	3 cut(s)	1039, 1753, 2465
PvuII	CAGCTG	2 cut(s)	1991, 2159
RsaI	GTAC	3 cut(s)	1444, 2188, 2279
RsaNI	GTAC	3 cut(s)	1443, 2187, 2278
RseI	CAYNNNNRTG	7 cut(s)	74, 417, 455, 649, 973, 1581, 2136
SapI	GCTCTTC	1 cut(s)	2445
SaqAI	TTAA	5 cut(s)	609, 1973, 2045, 2214, 2336
Sau3AI	GATC	8 cut(s)	1008, 1039, 1214, 1419, 1753, 1792, 2368, 2465
Sau96I	GGNCC	2 cut(s)	749, 1669
ScaI	AGTACT	1 cut(s)	1444
SchI	GAGTC	4 cut(s)	397, 533, 851, 2307
ScrFI	CCNGG	5 cut(s)	544, 591, 843, 1603, 1773
SduI	GDGCHC	1 cut(s)	1143
SfaNI	GCATC	5 cut(s)	201, 1272, 1340, 1987, 2128
SfcI	CTRYAG	2 cut(s)	1725, 1981
SfoI	GGCGCC	1 cut(s)	736
SmiMI	CAYNNNNRTG	7 cut(s)	74, 417, 455, 649, 973, 1581, 2136
SmlI	CTYRAG	1 cut(s)	2309
SmoI	CTYRAG	1 cut(s)	2309
SsiI	CCGC	8 cut(s)	11, 103, 1285, 2269, 2281, 2326, 2476, 2494
SspDI	GGCGCC	1 cut(s)	734
SspI	AATATT	2 cut(s)	948, 1415
SspMI	CTAG	4 cut(s)	392, 489, 1335, 1592
StyD4I	CCNGG	5 cut(s)	542, 589, 841, 1601, 1771
StyI	CCWWGG	2 cut(s)	334, 515
TaaI	ACNGT	7 cut(s)	206, 271, 419, 803, 1442, 1919, 2072
TaiI	ACGT	2 cut(s)	1660, 2203
TaqI	TCGA	5 cut(s)	1117, 1213, 1612, 2254, 2574
TatI	WGTACW	1 cut(s)	1442
TauI	GCSGC	1 cut(s)	1288
Tru1I	TTAA	5 cut(s)	609, 1973, 2045, 2214, 2336
Tru9I	TTAA	5 cut(s)	609, 1973, 2045, 2214, 2336
TscAI	CASTG	7 cut(s)	171, 855, 867, 1018, 1461, 1789, 1948
TseFI	GTSAC	1 cut(s)	1747
Tsp45I	GTSAC	1 cut(s)	1747
TspGWI	ACGGA	1 cut(s)	2174
TspRI	CASTG	7 cut(s)	171, 855, 867, 1018, 1461, 1789, 1948
XapI	RAATTY	5 cut(s)	114, 460, 484, 1201, 2238
XbaI	TCTAGA	2 cut(s)	391, 1591
XceI	RCATGY	3 cut(s)	1139, 2123, 2593
XcmI	CCANNNNNNNNNTGG	1 cut(s)	513
XmiI	GTMKAC	1 cut(s)	324
XmnI	GAANNNNTTC	4 cut(s)	315, 921, 1098, 1157
XspI	CTAG	4 cut(s)	392, 489, 1335, 1592
ZrmI	AGTACT	1 cut(s)	1444
Zsp2I	ATGCAT	1 cut(s)	2125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.