Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006328

Physical Location & Seq

Genomic Coordinates Forward (+)

23056267 .. 23066464

Gene Structure 10198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g19400.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGGACAAACCGCTTGTGGGTTCGGAGATTCATGGATTTCATACAATGCAAGATTTGGATGTCGACACTATTATGGAGGAAGCCAAAGGGAGATGGCTCCGCCCAAATGAAATCCATGCATTACTCTATAACTACAAGTATTTTACCATCCATGTCAAGCCAGTGAACTTGCCCCCAAGTGGCACCATTGTATTGTTTGACCGTAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAAAAAAGATGGGAAGACAGTCAAAGAAGCTCATGAACACTTGAAAGTTGGTAATGAAGAAAGGATACATGTATACTATGCCCATGGTGAGGATAGCCCAACCTTTGTCCGGAGGTGTTATTGGCTGCTTGATAAGAGTCTAGAACACATAGTCCTTGTTCATTACCGTGAAACACAGGAGGTGCAGGGTCCAGCAACTCCTGTGAATTCCAATTCAAATTCTAGTTCTGTCTCTGATCCATCTGCTCCTTGGCGTCTATCAGAAGAACTTGATTCTGGGGCTAAGAATTCATATTATGGTGGTGAAAATGAACTTTTAGAGTCTGGTAGCGGTTCGACTGTCAATAATCATGAACAAAGGCTCCATGATATCAATACACTTGAATGGGATGAGCTTTTGGTCACTTATGATTCCAGAGGAGACAAAGTTTCAGGCTTTGACCAGCAGAATCAACTTGTGGGAAATGGCACCATAAGTGGTGGAACCAGTGGTTTAGCAGCTGAAGTTTCTTCTTTTGGCAATTTACTCAATTCAAGTGCGAGGACAGGAAGCATTCATTTTGATCTTCCAGACAGTAATTATGTTCAGACATTGGAGGGTGAGGTGAATTCAAATGCCCAGAGAAGGGATTCTGTTGTCAAGGGGCCCAGTAATTCCCCGAACATTTTGGGTAATGATGGACTGCGTAGTCAGGACAGTTTTGGGAGGTGGATAAACCAGATTATGACCGACCCTTCAGGTTCAGTGGATGACCCTGTGCTTGATTCCTCATTTATAGCTGCTCAGAGTTCATTTACTTCTCCAGCAATGGAACATATTCAATCTTCTGTTCCTGAGCAAATATTTATCATAACCGATGTTTCACCATCCTGGGCTTTCTCAAATGAGAAAACAAAGATTCTGATCACTGGCTTCTTTCATCAAGAGTTTTTAGATCTTGCAAAGTCCAATCTACTTTGTATCTGTGGCGATGTATGTATTCCTGCTGAAATTGTTCAGGTTGGGGTATATCGATGTTTCATACCACCGCATGTGGCCGGATTAGTGAACCTTTTCATTAGCCTTGATGGTCATAAGCCCATCAGCCAAGTACTAAATTTTGAATATCGATCTCCTGTAACGAGTAACTCGGTAGTTCCTTCAGAAGAGAATAAATGGGAAGAGTTTCAATTACAGATGCGGCTTGCTAATTTGCTTTTCTCATCATCTAAAAGCTTGAGCATTGTATCTAGTAAAGTATCACCATATACCCTCAAAGAAGCCAAGAAGTTTTCCCATAGAACTTCTCACATATCAAATAGCTGGCAATATTTGATCAAATCCATTGAAGACAACAATACTCCTTTACCAGTGGCAAAGGATAGTTTGTTTGAACTCATCTTGAAGAACAGACTAAAAGATTGGCTGTTGGAGAAAGTTCTAGACAGCTCTAAAACCAAAGAATATGATAGTCATGGTCAAGGAGTAATCCACTTATGTGCTATTCTAGATTATACATGGGCTGTTCGATTGTTTTCATGGTCTGGTTTGTCATTAGACTTTCGTGATAGACGTGGATGGACAGCCCTTCATTGGGCCGCATATCATGGAAGGGAGAAAATGGTTGCAGTTCTTTTATCTGCAGGGGCAAAGCCAAACTTGGTCACAGACCCTACTTCAGAAAACCCTGGTGGTTGCACTGTTGCTGATATTGCATCCATGAACGGTTATGATGGCTTAGCAGCTTATCTTTCAGAAAAGGCTTTGGTAGAACAATTTAAGGACATGAGTCTAGCTGGAAATGTTAGTGGCTCCCTTCAAACTAACACAAACTATTATGGGAACTCTGAGAATCTGAGTGAGGAGGACTTGTATCTGAAGGATACTTTAACAGCCTATCAGACAGCTGCTGATGCAGCAGCACGAATACAAGCTGCCATCAGGGAGAACACACTAAAATTAAAGACTAAAGCAGTTCAGTATTCCACTCCTGAGGATGAAGCACGCAGTATAATTGCAGCATTGAAGATTCAACATGCATTTCGCCACTATGATACACGAAAAAAGATGGCAGCTGCTGCCCGTATTCAATATAGGTTCCGTACGTGGAAGATGCGTCAAGAGTTCCTTAATATGCGCCGTCAAGCTGTCAAAATTCAAGCTGCTTTTCGAGCCTTCCAAACGCGGAGGCAGTACCAAAAAATTCTATGGGGAGTTGGAGTGCTTGAAAAAGCTGTTCTGCGGTGGCGCTTAAAAAGAAAAGGGCTTCGGGGGCTTCAGGTTGATCCCATTGAATCTAATGGAGATGAGAAACAGGAAAGTGATACAGAAGAGGACTTCTACCGAAACAGCAGGAAACAAGCTGAAGAGCGTGTTGAGAGATCTGTTGTGCGGGTTCAGGCAATGTTCCGCTCCAAGAAAGCACAGCAAGAATATAGGAGGATGAAGTTGACTCATAATGAAGCAGAGCTGGAATATGATGATTTTTTCGACCCTGACAATAGCATGCGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

915

Amino Acids

103.46

Weight (kDa)

6.56

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	27 - 140	4.4e-46	CG-1 domain
Ank_2	PF12796	561 - 630	1.5e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	573 - 663	8.2e-08	Ankyrin repeats (3 copies)
Ank	PF00023	602 - 632	2.7e-07	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16940 AT3G16940 AT3G16940
fragaria_vesca	FvH4_4g19400 FvH4_4g19400
malus_domestica	MD16G1157900.v1.1
prunus_persica	Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1 Prupe.1G122800_v2.0.a1
pyrus_communis	pycom13g13450 pycom16g13290
rosa_chinensis	RchiOBHm_Chr4g0424431
rosa_laevigata	RLG00000007475
rosa_multiflora	Rmu_sc0003567.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366370
rosa_rugosa	Rorug04G0197700 Rorug04G0197800
rosa_samantha	Rh4AG253800 Rh4BG259100 Rh4CG270400 Rh4DG253600
rosa_wichuraiana	Rw4G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	936
AccB1I	GGYRCC	2 cut(s)	182, 716
AccBSI	CCGCTC	1 cut(s)	2640
AccI	GTMKAC	2 cut(s)	63, 321
AccII	CGCG	1 cut(s)	2413
AccIII	TCCGGA	1 cut(s)	357
AclWI	GGATC	2 cut(s)	479, 2507
AcoI	YGGCCR	1 cut(s)	1284
AcsI	RAATTY	7 cut(s)	454, 466, 535, 856, 1345, 2382, 2430
AcuI	CTGAAG	8 cut(s)	205, 771, 969, 1374, 1890, 2126, 2489, 2613
AcyI	GRCGYC	1 cut(s)	502
AfaI	GTAC	3 cut(s)	1341, 2332, 2423
AfiI	CCNNNNNNNGG	8 cut(s)	17, 179, 337, 357, 873, 874, 1821, 1822
AflIII	ACRYGT	1 cut(s)	316
AjiI	CACGTC	1 cut(s)	1802
AjnI	CCWGG	2 cut(s)	1118, 1915
AleI	CACNNNNGTG	1 cut(s)	1725
AloI	GAACNNNNNNTCC	4 cut(s)	384, 416, 594, 626
Alw26I	GTCTC	2 cut(s)	484, 663
AlwI	GGATC	2 cut(s)	479, 2507
AlwNI	CAGNNNCTG	2 cut(s)	2138, 2306
Aor13HI	TCCGGA	1 cut(s)	357
AoxI	GGCC	3 cut(s)	893, 1284, 1824
ApaI	GGGCCC	1 cut(s)	897
ApoI	RAATTY	7 cut(s)	454, 466, 535, 856, 1345, 2382, 2430
Asp700I	GAANNNNTTC	5 cut(s)	877, 1065, 1242, 1301, 1413
AspLEI	GCGC	2 cut(s)	2367, 2478
AspS9I	GGNCC	4 cut(s)	437, 893, 894, 1824
AsuHPI	GGTGA	6 cut(s)	347, 563, 860, 865, 1104, 1482
AvaII	GGWCC	1 cut(s)	437
AxyI	CCTNAGG	1 cut(s)	2220
BaeGI	GKGCMC	1 cut(s)	897
BanI	GGYRCC	2 cut(s)	182, 716
BanII	GRGCYC	1 cut(s)	897
BarI	GAAGNNNNNNTAC	2 cut(s)	297, 329
BbsI	GAAGAC	2 cut(s)	269, 1584
BceAI	ACGGC	1 cut(s)	2352
BciT130I	CCWGG	2 cut(s)	1120, 1917
BciVI	GTATCC	2 cut(s)	306, 2104
BclI	TGATCA	2 cut(s)	1152, 1563
BcoDI	GTCTC	2 cut(s)	484, 663
BfaI	CTAG	6 cut(s)	389, 471, 1479, 1670, 1736, 2021
BfmI	CTRYAG	1 cut(s)	1869
BfoI	RGCGCY	1 cut(s)	2479
BfuI	GTATCC	2 cut(s)	306, 2104
BglII	AGATCT	2 cut(s)	1183, 2609
BlpI	GCTNAGC	1 cut(s)	1966
BmcAI	AGTACT	1 cut(s)	1341
Bme1390I	CCNGG	2 cut(s)	1120, 1917
Bme18I	GGWCC	1 cut(s)	437
BmgBI	CACGTC	1 cut(s)	1802
BmgT120I	GGNCC	4 cut(s)	437, 893, 894, 1824
BmrFI	CCNGG	2 cut(s)	1120, 1917
BmrI	ACTGGG	1 cut(s)	891
BmsI	GCATC	5 cut(s)	198, 1416, 1952, 2131, 2331
BmuI	ACTGGG	1 cut(s)	891
BoxI	GACNNNNGTC	1 cut(s)	2016
BpiI	GAAGAC	2 cut(s)	269, 1584
BpmI	CTGGAG	1 cut(s)	1035
Bpu10I	CCTNAGC	1 cut(s)	1083
Bpu1102I	GCTNAGC	1 cut(s)	1966
BpuEI	CTTGAG	1 cut(s)	1486
Bsa29I	ATCGAT	2 cut(s)	1261, 1357
BsaAI	YACGTR	1 cut(s)	2334
BsaBI	GATNNNNATC	1 cut(s)	1151
BsaHI	GRCGYC	1 cut(s)	502
BsaJI	CCNNGG	4 cut(s)	331, 497, 1119, 1915
BsaWI	WCCGGW	1 cut(s)	357
BsaXI	ACNNNNNCTCC	8 cut(s)	594, 624, 660, 690, 2084, 2114, 2433, 2463
Bsc4I	CCNNNNNNNGG	8 cut(s)	17, 179, 337, 357, 873, 874, 1821, 1822
Bse1I	ACTGG	6 cut(s)	161, 245, 735, 897, 1162, 1598
Bse21I	CCTNAGG	1 cut(s)	2220
Bse3DI	GCAATG	2 cut(s)	1062, 2637
Bse8I	GATNNNNATC	1 cut(s)	1151
BseAI	TCCGGA	1 cut(s)	357
BseBI	CCWGG	2 cut(s)	1120, 1917
BseCI	ATCGAT	2 cut(s)	1261, 1357
BseDI	CCNNGG	4 cut(s)	331, 497, 1119, 1915
BseGI	GGATG	9 cut(s)	64, 147, 643, 1003, 1115, 1811, 1943, 2230, 2676
BseJI	GATNNNNATC	1 cut(s)	1151
BseLI	CCNNNNNNNGG	8 cut(s)	17, 179, 337, 357, 873, 874, 1821, 1822
BseMI	GCAATG	2 cut(s)	1062, 2637
BseMII	CTCAG	5 cut(s)	1046, 1074, 2067, 2075, 2211
BseNI	ACTGG	6 cut(s)	161, 245, 735, 897, 1162, 1598
BseRI	GAGGAG	2 cut(s)	681, 2105
BseSI	GKGCMC	1 cut(s)	897
BsgI	GTGCAG	1 cut(s)	452
Bsh1236I	CGCG	1 cut(s)	2413
BshFI	GGCC	3 cut(s)	895, 1286, 1826
BshNI	GGYRCC	2 cut(s)	182, 716
BshVI	ATCGAT	2 cut(s)	1261, 1357
BsiSI	CCGG	2 cut(s)	358, 1287
BsiWI	CGTACG	1 cut(s)	2330
BslI	CCNNNNNNNGG	8 cut(s)	17, 179, 337, 357, 873, 874, 1821, 1822
BsmAI	GTCTC	2 cut(s)	484, 663
BsmI	GAATGC	1 cut(s)	801
BsnI	GGCC	3 cut(s)	895, 1286, 1826
Bsp120I	GGGCCC	1 cut(s)	893
Bsp1286I	GDGCHC	1 cut(s)	897
Bsp13I	TCCGGA	1 cut(s)	357
Bsp143I	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
Bsp1720I	GCTNAGC	1 cut(s)	1966
Bsp19I	CCATGG	1 cut(s)	331
BspANI	GGCC	3 cut(s)	895, 1286, 1826
BspCNI	CTCAG	5 cut(s)	1045, 1075, 2068, 2076, 2212
BspDI	ATCGAT	2 cut(s)	1261, 1357
BspEI	TCCGGA	1 cut(s)	357
BspFNI	CGCG	1 cut(s)	2413
BspHI	TCATGA	2 cut(s)	280, 598
BspMAI	CTGCAG	1 cut(s)	1873
BspPI	GGATC	2 cut(s)	479, 2507
BspQI	GCTCTTC	1 cut(s)	2589
BspT107I	GGYRCC	2 cut(s)	182, 716
BsrBI	CCGCTC	1 cut(s)	2640
BsrDI	GCAATG	2 cut(s)	1062, 2637
BsrI	ACTGG	6 cut(s)	161, 245, 735, 897, 1162, 1598
BssECI	CCNNGG	4 cut(s)	331, 497, 1119, 1915
BssMI	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
BssNAI	GTATAC	1 cut(s)	322
BssNI	GRCGYC	1 cut(s)	502
BssT1I	CCWWGG	2 cut(s)	331, 497
Bst1107I	GTATAC	1 cut(s)	322
Bst2UI	CCWGG	2 cut(s)	1120, 1917
Bst4CI	ACNGT	8 cut(s)	203, 268, 416, 589, 824, 947, 1930, 1955
Bst6I	CTCTTC	4 cut(s)	1389, 1404, 2553, 2589
BstACI	GRCGYC	1 cut(s)	502
BstAPI	GCANNNNNTGC	1 cut(s)	2306
BstBAI	YACGTR	1 cut(s)	2334
BstC8I	GCNNGC	4 cut(s)	1434, 1553, 2233, 2735
BstDEI	CTNAG	8 cut(s)	212, 531, 1032, 1083, 1966, 2076, 2084, 2220
BstDSI	CCRYGG	1 cut(s)	331
BstF5I	GGATG	9 cut(s)	64, 147, 643, 1003, 1115, 1811, 1943, 2230, 2676
BstFNI	CGCG	1 cut(s)	2413
BstH2I	RGCGCY	1 cut(s)	2479
BstHHI	GCGC	2 cut(s)	2367, 2478
BstKTI	GATC	8 cut(s)	487, 814, 1155, 1186, 1361, 1566, 2515, 2612
BstMAI	GTCTC	2 cut(s)	484, 663
BstMBI	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
BstMWI	GCNNNNNNNGC	6 cut(s)	1940, 2141, 2144, 2306, 2399, 2500
BstNI	CCWGG	2 cut(s)	1120, 1917
BstNSI	RCATGY	4 cut(s)	320, 1283, 2267, 2737
BstPAI	GACNNNNGTC	1 cut(s)	2016
BstSCI	CCNGG	2 cut(s)	1118, 1915
BstSFI	CTRYAG	1 cut(s)	1869
BstSLI	GKGCMC	1 cut(s)	897
BstUI	CGCG	1 cut(s)	2413
BstV2I	GAAGAC	2 cut(s)	269, 1584
BstX2I	RGATCY	2 cut(s)	1183, 2609
BstYI	RGATCY	2 cut(s)	1183, 2609
BstZ17I	GTATAC	1 cut(s)	322
Bsu15I	ATCGAT	2 cut(s)	1261, 1357
Bsu36I	CCTNAGG	1 cut(s)	2220
BsuI	GTATCC	2 cut(s)	306, 2104
BsuRI	GGCC	3 cut(s)	895, 1286, 1826
BsuTUI	ATCGAT	2 cut(s)	1261, 1357
BtgI	CCRYGG	1 cut(s)	331
BtgZI	GCGATG	1 cut(s)	1233
BtrI	CACGTC	1 cut(s)	1802
BtsCI	GGATG	9 cut(s)	64, 147, 643, 1003, 1115, 1811, 1943, 2230, 2676
BtsIMutI	CAGTG	6 cut(s)	168, 742, 999, 1155, 1605, 1926
Cac8I	GCNNGC	4 cut(s)	1434, 1553, 2233, 2735
CaiI	CAGNNNCTG	2 cut(s)	2138, 2306
CciI	TCATGA	2 cut(s)	280, 598
CfoI	GCGC	2 cut(s)	2367, 2478
Cfr13I	GGNCC	4 cut(s)	437, 893, 894, 1824
ClaI	ATCGAT	2 cut(s)	1261, 1357
CseI	GACGC	2 cut(s)	491, 2333
Csp6I	GTAC	3 cut(s)	1340, 2331, 2422
CviQI	GTAC	3 cut(s)	1340, 2331, 2422
DdeI	CTNAG	8 cut(s)	212, 531, 1032, 1083, 1966, 2076, 2084, 2220
DpnI	GATC	8 cut(s)	486, 813, 1154, 1185, 1360, 1565, 2514, 2611
DpnII	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
DrdI	GACNNNNNNGTC	1 cut(s)	936
DseDI	GACNNNNNNGTC	1 cut(s)	936
EaeI	YGGCCR	1 cut(s)	1284
Eam1104I	CTCTTC	4 cut(s)	1389, 1404, 2553, 2589
EarI	CTCTTC	4 cut(s)	1389, 1404, 2553, 2589
EciI	GGCGGA	1 cut(s)	89
Eco130I	CCWWGG	2 cut(s)	331, 497
Eco24I	GRGCYC	1 cut(s)	897
Eco32I	GATATC	1 cut(s)	619
Eco47I	GGWCC	1 cut(s)	437
Eco57I	CTGAAG	8 cut(s)	205, 771, 969, 1374, 1890, 2126, 2489, 2613
Eco81I	CCTNAGG	1 cut(s)	2220
EcoO109I	RGGNCCY	1 cut(s)	893
EcoRI	GAATTC	3 cut(s)	454, 535, 856
EcoRII	CCWGG	2 cut(s)	1118, 1915
EcoRV	GATATC	1 cut(s)	619
EcoT14I	CCWWGG	2 cut(s)	331, 497
EcoT22I	ATGCAT	2 cut(s)	121, 2269
EcoT38I	GRGCYC	1 cut(s)	897
ErhI	CCWWGG	2 cut(s)	331, 497
FalI	AAGNNNNNCTT	4 cut(s)	1871, 1903, 2340, 2372
FauI	CCCGC	1 cut(s)	2613
FbaI	TGATCA	2 cut(s)	1152, 1563
FblI	GTMKAC	2 cut(s)	63, 321
FokI	GGATG	9 cut(s)	71, 134, 650, 1010, 1102, 1818, 1930, 2237, 2683
FriOI	GRGCYC	1 cut(s)	897
FspBI	CTAG	6 cut(s)	389, 471, 1479, 1670, 1736, 2021
GlaI	GCGC	2 cut(s)	2366, 2477
GsuI	CTGGAG	1 cut(s)	1035
HaeII	RGCGCY	1 cut(s)	2479
HaeIII	GGCC	3 cut(s)	895, 1286, 1826
HapII	CCGG	2 cut(s)	358, 1287
HgaI	GACGC	2 cut(s)	491, 2333
HhaI	GCGC	2 cut(s)	2367, 2478
Hin1I	GRCGYC	1 cut(s)	502
Hin6I	GCGC	2 cut(s)	2365, 2476
HinP1I	GCGC	2 cut(s)	2365, 2476
HincII	GTYRAC	2 cut(s)	64, 2679
HindII	GTYRAC	2 cut(s)	64, 2679
HindIII	AAGCTT	1 cut(s)	1462
HpaII	CCGG	2 cut(s)	358, 1287
HphI	GGTGA	6 cut(s)	347, 563, 860, 865, 1104, 1482
Hpy166II	GTNNAC	5 cut(s)	64, 166, 322, 1297, 2679
Hpy8I	GTNNAC	5 cut(s)	64, 166, 322, 1297, 2679
HpyAV	CCTTC	8 cut(s)	867, 993, 1398, 1826, 1833, 2054, 2101, 2413
HpyCH4III	ACNGT	8 cut(s)	203, 268, 416, 589, 824, 947, 1930, 1955
HpyCH4IV	ACGT	2 cut(s)	1801, 2333
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1940, 2141, 2144, 2306, 2399, 2500
HpyF3I	CTNAG	8 cut(s)	212, 531, 1032, 1083, 1966, 2076, 2084, 2220
HpySE526I	ACGT	2 cut(s)	1801, 2333
Hsp92I	GRCGYC	1 cut(s)	502
HspAI	GCGC	2 cut(s)	2365, 2476
Kpn2I	TCCGGA	1 cut(s)	357
Ksp22I	TGATCA	2 cut(s)	1152, 1563
Kzo9I	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
LguI	GCTCTTC	1 cut(s)	2589
LmnI	GCTCC	5 cut(s)	102, 499, 615, 2045, 2645
LweI	GCATC	5 cut(s)	198, 1416, 1952, 2131, 2331
MaeI	CTAG	6 cut(s)	389, 471, 1479, 1670, 1736, 2021
MaeII	ACGT	2 cut(s)	1801, 2333
MaeIII	GTNAC	4 cut(s)	649, 1366, 1373, 1891
MalI	GATC	8 cut(s)	486, 813, 1154, 1185, 1360, 1565, 2514, 2611
MbiI	CCGCTC	1 cut(s)	2640
MboI	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
MflI	RGATCY	2 cut(s)	1183, 2609
MhlI	GDGCHC	1 cut(s)	897
MlyI	GAGTC	4 cut(s)	394, 578, 2026, 2674
MmeI	TCCRAC	2 cut(s)	1638, 2425
Mph1103I	ATGCAT	2 cut(s)	121, 2269
MroI	TCCGGA	1 cut(s)	357
MroXI	GAANNNNTTC	5 cut(s)	877, 1065, 1242, 1301, 1413
MseI	TTAA	5 cut(s)	2007, 2117, 2189, 2358, 2480
MslI	CAYNNNNRTG	4 cut(s)	71, 414, 631, 1725
MspA1I	CMGCKG	3 cut(s)	749, 2135, 2303
MspI	CCGG	2 cut(s)	358, 1287
MspR9I	CCNGG	2 cut(s)	1120, 1917
Mva1269I	GAATGC	1 cut(s)	801
MvaI	CCWGG	2 cut(s)	1120, 1917
MvnI	CGCG	1 cut(s)	2413
MwoI	GCNNNNNNNGC	6 cut(s)	1940, 2141, 2144, 2306, 2399, 2500
NcoI	CCATGG	1 cut(s)	331
NdeII	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
NmuCI	GTSAC	2 cut(s)	649, 1891
NsiI	ATGCAT	2 cut(s)	121, 2269
NspI	RCATGY	4 cut(s)	320, 1283, 2267, 2737
OliI	CACNNNNGTG	1 cut(s)	1725
PaeI	GCATGC	1 cut(s)	2737
PagI	TCATGA	2 cut(s)	280, 598
PciI	ACATGT	1 cut(s)	316
PciSI	GCTCTTC	1 cut(s)	2589
PcsI	WCGNNNNNNNCGW	1 cut(s)	1798
PctI	GAATGC	1 cut(s)	801
PdmI	GAANNNNTTC	5 cut(s)	877, 1065, 1242, 1301, 1413
Pfl23II	CGTACG	1 cut(s)	2330
PleI	GAGTC	4 cut(s)	393, 577, 2025, 2674
PpsI	GAGTC	4 cut(s)	393, 577, 2025, 2674
Ppu21I	YACGTR	1 cut(s)	2334
PscI	ACATGT	1 cut(s)	316
PshAI	GACNNNNGTC	1 cut(s)	2016
Psp6I	CCWGG	2 cut(s)	1118, 1915
PspGI	CCWGG	2 cut(s)	1118, 1915
PspLI	CGTACG	1 cut(s)	2330
PspOMI	GGGCCC	1 cut(s)	893
PspPI	GGNCC	4 cut(s)	437, 893, 894, 1824
PstI	CTGCAG	1 cut(s)	1873
PstNI	CAGNNNCTG	2 cut(s)	2138, 2306
PsuI	RGATCY	2 cut(s)	1183, 2609
PvuII	CAGCTG	3 cut(s)	749, 2135, 2303
RsaI	GTAC	3 cut(s)	1341, 2332, 2423
RsaNI	GTAC	3 cut(s)	1340, 2331, 2422
RseI	CAYNNNNRTG	4 cut(s)	71, 414, 631, 1725
SalI	GTCGAC	1 cut(s)	62
SapI	GCTCTTC	1 cut(s)	2589
SaqAI	TTAA	5 cut(s)	2007, 2117, 2189, 2358, 2480
Sau3AI	GATC	8 cut(s)	484, 811, 1152, 1183, 1358, 1563, 2512, 2609
Sau96I	GGNCC	4 cut(s)	437, 893, 894, 1824
ScaI	AGTACT	1 cut(s)	1341
SchI	GAGTC	4 cut(s)	394, 578, 2026, 2674
ScrFI	CCNGG	2 cut(s)	1120, 1917
SduI	GDGCHC	1 cut(s)	897
SfaNI	GCATC	5 cut(s)	198, 1416, 1952, 2131, 2331
SfcI	CTRYAG	1 cut(s)	1869
SinI	GGWCC	1 cut(s)	437
SmiMI	CAYNNNNRTG	4 cut(s)	71, 414, 631, 1725
SmlI	CTYRAG	1 cut(s)	1465
SmoI	CTYRAG	1 cut(s)	1465
SphI	GCATGC	1 cut(s)	2737
SspI	AATATT	2 cut(s)	1092, 1559
SspMI	CTAG	6 cut(s)	389, 471, 1479, 1670, 1736, 2021
StyD4I	CCNGG	2 cut(s)	1118, 1915
StyI	CCWWGG	2 cut(s)	331, 497
TaaI	ACNGT	8 cut(s)	203, 268, 416, 589, 824, 947, 1930, 1955
TaiI	ACGT	2 cut(s)	1804, 2336
TaqI	TCGA	7 cut(s)	63, 584, 1261, 1357, 1756, 2398, 2718
TaqII	GACCGA	1 cut(s)	992
TatI	WGTACW	1 cut(s)	1339
TauI	GCSGC	2 cut(s)	1432, 1829
Tru1I	TTAA	5 cut(s)	2007, 2117, 2189, 2358, 2480
Tru9I	TTAA	5 cut(s)	2007, 2117, 2189, 2358, 2480
TscAI	CASTG	6 cut(s)	168, 742, 999, 1162, 1605, 1933
TseFI	GTSAC	2 cut(s)	649, 1891
Tsp45I	GTSAC	2 cut(s)	649, 1891
TspGWI	ACGGA	1 cut(s)	2318
TspRI	CASTG	6 cut(s)	168, 742, 999, 1162, 1605, 1933
VpaK11BI	GGWCC	1 cut(s)	437
XapI	RAATTY	7 cut(s)	454, 466, 535, 856, 1345, 2382, 2430
XbaI	TCTAGA	3 cut(s)	388, 1669, 1735
XceI	RCATGY	4 cut(s)	320, 1283, 2267, 2737
XcmI	CCANNNNNNNNNTGG	1 cut(s)	495
XmiI	GTMKAC	2 cut(s)	63, 321
XmnI	GAANNNNTTC	5 cut(s)	877, 1065, 1242, 1301, 1413
XspI	CTAG	6 cut(s)	389, 471, 1479, 1670, 1736, 2021
ZrmI	AGTACT	1 cut(s)	1341
Zsp2I	ATGCAT	2 cut(s)	121, 2269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.